Cla014021 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla014021
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Formin-like protein 6 (AHRD V1 ***- FH6_ARATH)
Location	Chr1 : 27451584 .. 27452417 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAACCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAA

mRNA sequence

ATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAACCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAA

Coding sequence (CDS)

ATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAACCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAA

Protein sequence

MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPSPPPPLGSADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNVQAKGTSPLPYLEDSSIKQDAASTPPHPTTTL

Homology

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BLAST of Cla014021 vs. Swiss-Prot
Match: FH6_ARATH (Formin-like protein 6 OS=Arabidopsis thaliana GN=FH6 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30
Identity = 110/271 (40.59%), Postives = 137/271 (50.55%), Query Frame = 1


Query: 23  VNANSQRRSLHQPLDPTT-------FSSPPSPP----PPLGSADSNQPTP---------- 82
           V++ + RR LHQPL P +       F S PSPP    P       N  TP          
Sbjct: 22  VSSEAHRRILHQPLFPESSTPPPPDFQSTPSPPLPDTPDQPFFPENPSTPQQTLFPPPPP 81

Query: 83  ---APSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSR 142
              A  N  LP +P++T QS KP K + IV SV IVTLGMLSALAFFLYR + K+   ++
Sbjct: 82  PVSADVNGGLP-IPTATTQSAKPGKKVAIVISVGIVTLGMLSALAFFLYRHKAKHASDTQ 141

Query: 143 MLV----EKERSLSFRPDSGIP---PSSFLNFGTMERRPCSIIERKGG-KGEDQSSPHRP 202
            LV    +   S  F+ DSG P    S+FL  GT+E    S  E  GG  G   SSP+R 
Sbjct: 142 KLVTGGGDGGGSRRFQEDSGPPTTTSSTFLYMGTVEPTRVSASESNGGTNGPVNSSPYRK 201

Query: 203 VDSVNKLDSHLLSPELQPLPPLS---QNQIVNPSFETPLSD---DESRETVFHTPEWSAA 254
           ++S  + + +  SPELQPLPPL+   Q    +PS  +P S    +E R+T F+TP  SA 
Sbjct: 202 LNSAKRSERYRPSPELQPLPPLAKPPQPSDNSPSALSPSSSSSGEECRDTAFYTPHGSAI 261

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BLAST of Cla014021 vs. Swiss-Prot
Match: FH8_ORYSJ (Formin-like protein 8 OS=Oryza sativa subsp. japonica GN=FH8 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 85/325 (26.15%), Postives = 116/325 (35.69%), Query Frame = 1


Query: 3   PSFLIFFLSLDLLVLLNHPRVNANS-------QRRSLHQPLDPTTFSSPPSPPPP----L 62
           P  +  F+++  ++L  H  V A S        RR LHQPL P  ++ PPSPPPP     
Sbjct: 2   PPAIARFVAIAAVLLCGHVAVAAESGGVGGGSARRVLHQPLFPIEWTPPPSPPPPPAPDF 61

Query: 63  GSADSNQPTP-APSNVSLPNLPSSTQQSFKP----------------------------- 122
            S  S  P P APS    P  P +T     P                             
Sbjct: 62  TSDPSTPPAPDAPSGDFFPPAPPTTTTPTSPGTTPSPTTVAADVSKTPSGSGSGHHGGGP 121

Query: 123 ----IKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPP 182
               I   G   + A+  LG   A   FL   R + R  S+ L+  +R+ + R  +    
Sbjct: 122 TKATIVAAGAGAAAAVALLGFACA---FLITGRARRRGDSQKLLGPDRAGAHR-SAATSA 181

Query: 183 SSFLNFGTMERRPCSIIERKGGKGED-QSSPHRPVDSVNKL-------DSHLLSPELQPL 242
           + FL  GT+E  P +     G    D   SP+R + S           D+   SPEL+PL
Sbjct: 182 ADFLYVGTVE--PTTPARHHGPTTADLVGSPYRKLRSERARRGVSRDEDADHPSPELRPL 241

Query: 243 PPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNVQAK 274
           PPL +   +            S E  ++TP   +  S GGG        S +        
Sbjct: 242 PPLRRAATLG----------SSDEDGYYTPRQLSGGSGGGGAAEAWSSASASSPPTTTTA 301

HSP 2 Score: 35.0 bits (79), Expect = 1.5e+00
Identity = 18/47 (38.30%), Postives = 22/47 (46.81%), Query Frame = 1


Query: 40  TFSSPPSPPPPLGSADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLG 87
           T   PP PPPP  S  SN   P P+    P +P+S ++  KP+   G
Sbjct: 369 TAPKPPPPPPPPPSVPSNNNLPKPAEP--PAVPTSRRRLLKPLPPEG 413

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BLAST of Cla014021 vs. Swiss-Prot
Match: FH9_ARATH (Formin-like protein 9 OS=Arabidopsis thaliana GN=FH9 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 65/230 (28.26%), Postives = 90/230 (39.13%), Query Frame = 1


Query: 35  PLDPTTF---SSPPSPPPPLGSADSNQPTPAPSNVSLPNLPSSTQ-----QSFKP---IK 94
           P+ P  F   SSPPSPPPPL       PTP  +    P  P++       +S KP     
Sbjct: 47  PISPPFFPLESSPPSPPPPL------PPTPPTTFAVFPTFPANISALVLPRSSKPHHTSP 106

Query: 95  TLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFL-N 154
           TL +    A++ +  +  LA FLY    ++R ++R L     S S     G   S    N
Sbjct: 107 TLLLPALSAVLVIATVIGLALFLYG---RHRGQTRHLKNSHCSSSNTSSYGDEQSHITTN 166

Query: 155 FGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSF 214
           F        S +         + S H        L     SPE++PLPPL      + ++
Sbjct: 167 FNMAATTSPSEVFYLN----TEESDHIRTGGTFFLKQD--SPEIRPLPPLPPRSFHHNNY 226

Query: 215 ETPLS--DDESRETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNVQAKG 251
           ET ++  D+E  E VF +P  S          P S   S +HS +    G
Sbjct: 227 ETEVNEEDEEEEEDVFFSPMAS---------LPGSANSSPSHSCSSSCSG 252

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BLAST of Cla014021 vs. TrEMBL
Match: A0A0A0KIH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495090 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.9e-122
Identity = 238/287 (82.93%), Postives = 247/287 (86.06%), Query Frame = 1


Query: 1   MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPSPPPP------LGSA 60
           MK SFLIF LSLD  V+LNH RVN +S RRSLHQPLDP TFSSPPSPPPP      L SA
Sbjct: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPLESA 60

Query: 61  DSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120
            S+QPTPAPSNVSLPNLPSS QQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR
Sbjct: 61  HSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120

Query: 121 CKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSV 180
            KSRMLVEKERSLSFR DSGIPPSSFLN+GTMERRP SI+ERKGGKGED SSP R VDSV
Sbjct: 121 YKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDSV 180

Query: 181 NKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPK 240
            KLD HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW+AAV Y GG    
Sbjct: 181 KKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG---- 240

Query: 241 SKRESRNHSLNVQAK-GTSPLPYLEDSSIKQD----AASTPPHPTTT 277
            KRESRN+SL+V+ K GTSPLPYLEDS IKQD    AAS PPHPTTT
Sbjct: 241 -KRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 282

[Close]

BLAST of Cla014021 vs. TrEMBL
Match: W9RIZ3_9ROSA (Formin-like protein OS=Morus notabilis GN=L484_009403 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39
Identity = 119/304 (39.14%), Postives = 162/304 (53.29%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLL---NHPRVNANSQRRSLHQPLDPTTF-------------SSPPSPP 64
           + +FFL L  LVL    +   V+  S RR LHQPL P +              SSPP PP
Sbjct: 6   YFVFFLILPQLVLTLTKSFAIVDNLSHRRILHQPLFPASSAPPPGTDDSTVSSSSPPPPP 65

Query: 65  PPLGSADS-----------NQPTPAPSNVSLPN---------LPSSTQQSFKPIKTLGIV 124
           PP   A S           N PTP  S  S P          +P++TQ   KPIK + I 
Sbjct: 66  PPSPDAYSTPDQPFFHEIPNGPTPDQSQQSTPPNSPSNGTVAIPTATQPP-KPIKKVAIA 125

Query: 125 CSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVE-------KERSLSFRPDSGIPPSSFL 184
            SV IVTLGMLSALAFFLYR R+K+  +++ LV        ++ S SF  DS +PPSSF+
Sbjct: 126 ISVGIVTLGMLSALAFFLYRHRVKHPSETQKLVAGGGGGGGRDNSQSFTEDSRVPPSSFI 185

Query: 185 NFGTMERRPCSIIERKGGKGED---QSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIV 244
             GTME    S+ E  GG   +     SP+R ++S+ + D +  SPELQPLPPL++   +
Sbjct: 186 YIGTMEPSRTSLSEANGGHSRELAPNKSPYRKLNSIKRSDRYRPSPELQPLPPLAKPPSM 245

Query: 245 NPSFETPLSDDESRETVFHTPEWSAAVSYGGGVF--PKSKRESRNHSLNVQAKGTSPLPY 261
           N       SD+ESRET FH+P+ S +VSY    +  P S++  ++++ N   K + P+P 
Sbjct: 246 NSPSAMDSSDEESRETAFHSPQCS-SVSYDDSYYYTPVSRQSGKSNNGNASVKSSIPMPS 305

[Close]

BLAST of Cla014021 vs. TrEMBL
Match: A0A0A0LJI8_CUCSA (Formin-like protein OS=Cucumis sativus GN=Csa_2G271460 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 119/311 (38.26%), Postives = 158/311 (50.80%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQ---RRSLHQPLDPTTFS-------SPPSPPPPLGSA 64
           F IFFL L          +  +S    RR LHQPL P           SPP PPPP   A
Sbjct: 11  FFIFFLPL-FFTFFTATALTFDSYIPYRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPA 70

Query: 65  DS-------------NQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSA 124
           D              +QP P+ SN ++P +P++T Q  KP KT+ I  SV IVTLGMLSA
Sbjct: 71  DDQPFFHELPTTPDQSQPPPSSSNGTMP-IPAATAQPSKPTKTVAIAISVGIVTLGMLSA 130

Query: 125 LAFFLYRQRIKYRCKSRMLVEKERSLS-FRPDSGIPPSSFLNFGTMERRPCSIIERKGGK 184
           LAFFLYR R K+  +S+ LV    +   F  DS  PPSSF   GT+E    S++E+ G  
Sbjct: 131 LAFFLYRHRAKHPGESQKLVGGSNNPERFVEDSRAPPSSFFYIGTVEPSQSSVVEQNGAN 190

Query: 185 GEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPE 244
           G + SSP+R ++S+ + D +  SPELQPLPPL +  +         SD+ES +T FHTP+
Sbjct: 191 GAN-SSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDEESLDTAFHTPQ 250

Query: 245 WSAAVSYGGGVFPKSKRES-----------RNHSLN-------VQAKGTSPLPYLEDSSI 274
            S+ VS+  G F  + R S           +N  +N         +K TSP      SS 
Sbjct: 251 CSSIVSHEDGYFSPASRRSNSVKSCSAASYKNDHMNSNPPPPIPHSKRTSPKSRFSVSST 310

[Close]

BLAST of Cla014021 vs. TrEMBL
Match: F6HST7_VITVI (Formin-like protein OS=Vitis vinifera GN=VIT_07s0129g00220 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 121/296 (40.88%), Postives = 166/296 (56.08%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTF-----SSPPSPPP---------- 64
           F +FF+ L  L    H    A SQRR LHQPL P +       SPP PPP          
Sbjct: 6   FYLFFVLL--LSFSLHTAATALSQRRILHQPLFPDSSPPPGADSPPPPPPDSQVFPNPDQ 65

Query: 65  ------PLG-SADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSAL 124
                 P G + D++QP PA +N + P +P++TQ + KP K + I  SV IVTLGMLSAL
Sbjct: 66  PFFPEVPTGPTTDASQPPPATTNGTAP-IPTATQPT-KPTKKVAIAISVGIVTLGMLSAL 125

Query: 125 AFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGE 184
           AFFLYR R+K+  +S+ LV    S SF+ +S +PPSSFL  GT+E    S  E  G  G 
Sbjct: 126 AFFLYRHRVKHPGESQKLV-GGGSQSFQEESRVPPSSFLYIGTVEPSRRSGNEANGANGT 185

Query: 185 DQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFET-PLSDDESRETVFHTPEW 244
           +  SP+  ++S+ + D +  SPELQPLPPL+   + N S +    SD+E  ETVF+TP+ 
Sbjct: 186 N-GSPYHKLNSIKRSDRYRPSPELQPLPPLNNPPVRNNSPQAMSWSDEEGHETVFYTPQA 245

Query: 245 SAAVSYGGGVFPKSKRESR--NHSLNVQAK----GTSPLPYLEDSSIKQDAASTPP 272
           S+  +  G   P S++ S   N S    AK    GTSP+P+ + +S K   +++ P
Sbjct: 246 SSIGNDEGFYTPVSRQNSNSINSSSATPAKTESHGTSPVPHSKRTSPKSRRSASSP 295

[Close]

BLAST of Cla014021 vs. TrEMBL
Match: K4BD43_SOLLC (Formin-like protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 118/313 (37.70%), Postives = 156/313 (49.84%), Query Frame = 1


Query: 1   MKPSFLIFFLSLDLLVLLN---HPRVNANSQRRSLHQPLDPTTFSSPP----SPPPPLGS 60
           M+ + L  F  L LL          V     RR LHQPL P + + PP    SPPPP   
Sbjct: 1   MRAAGLSIFFILSLLSSFTCQFQDLVVKEKNRRILHQPLFPVSSTPPPDSEISPPPPAEP 60

Query: 61  ADS----------------NQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLG 120
            +S                +QP   P+N   P   S   Q+ KP+K + I  SV IVTLG
Sbjct: 61  VNSQPFFPEVPTGTTPDQTHQPQVTPAN-GTPVSNSVATQTAKPVKKVAIAISVGIVTLG 120

Query: 121 MLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERK 180
           MLSALAF+LY+ R+K+  +++ LV +        +S  PPS+FL  GT+E  P +     
Sbjct: 121 MLSALAFYLYKHRVKHPDETQKLVRRNSDQRINEESRTPPSTFLYIGTVE--PPAKTSAM 180

Query: 181 GGKGEDQSSPHRPVDSVNKLDS-HLLSPELQPLPPLSQNQIVNPSFETPL----SDDESR 240
               +   SP+R + SV ++DS +  SP+LQPLPPLS+ Q   PS  +P     SD+ES 
Sbjct: 181 TDSNDATGSPYRKLSSVKRMDSRYRPSPDLQPLPPLSKPQ-PPPSINSPTAMSSSDEESH 240

Query: 241 ETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNV--QAKGTSPLPYLEDS---------- 274
           +T FHTP+ S  VS   G +  S RES + + N    +K TSP   L DS          
Sbjct: 241 DTAFHTPQGS-TVSNEEGYYTPSLRESYSSNKNYVPYSKRTSPRSRLSDSSAEVKHTMIP 300

[Close]

BLAST of Cla014021 vs. NCBI nr
Match: gi|700193400|gb|KGN48604.1| (hypothetical protein Csa_6G495090 [Cucumis sativus])

HSP 1 Score: 446.8 bits (1148), Expect = 2.7e-122
Identity = 238/287 (82.93%), Postives = 247/287 (86.06%), Query Frame = 1


Query: 1   MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPSPPPP------LGSA 60
           MK SFLIF LSLD  V+LNH RVN +S RRSLHQPLDP TFSSPPSPPPP      L SA
Sbjct: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPLESA 60

Query: 61  DSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120
            S+QPTPAPSNVSLPNLPSS QQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR
Sbjct: 61  HSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120

Query: 121 CKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSV 180
            KSRMLVEKERSLSFR DSGIPPSSFLN+GTMERRP SI+ERKGGKGED SSP R VDSV
Sbjct: 121 YKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDSV 180

Query: 181 NKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPK 240
            KLD HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW+AAV Y GG    
Sbjct: 181 KKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG---- 240

Query: 241 SKRESRNHSLNVQAK-GTSPLPYLEDSSIKQD----AASTPPHPTTT 277
            KRESRN+SL+V+ K GTSPLPYLEDS IKQD    AAS PPHPTTT
Sbjct: 241 -KRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 282

[Close]

BLAST of Cla014021 vs. NCBI nr
Match: gi|703123243|ref|XP_010102774.1| (Formin-like protein 6 [Morus notabilis])

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 119/304 (39.14%), Postives = 162/304 (53.29%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLL---NHPRVNANSQRRSLHQPLDPTTF-------------SSPPSPP 64
           + +FFL L  LVL    +   V+  S RR LHQPL P +              SSPP PP
Sbjct: 6   YFVFFLILPQLVLTLTKSFAIVDNLSHRRILHQPLFPASSAPPPGTDDSTVSSSSPPPPP 65

Query: 65  PPLGSADS-----------NQPTPAPSNVSLPN---------LPSSTQQSFKPIKTLGIV 124
           PP   A S           N PTP  S  S P          +P++TQ   KPIK + I 
Sbjct: 66  PPSPDAYSTPDQPFFHEIPNGPTPDQSQQSTPPNSPSNGTVAIPTATQPP-KPIKKVAIA 125

Query: 125 CSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVE-------KERSLSFRPDSGIPPSSFL 184
            SV IVTLGMLSALAFFLYR R+K+  +++ LV        ++ S SF  DS +PPSSF+
Sbjct: 126 ISVGIVTLGMLSALAFFLYRHRVKHPSETQKLVAGGGGGGGRDNSQSFTEDSRVPPSSFI 185

Query: 185 NFGTMERRPCSIIERKGGKGED---QSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIV 244
             GTME    S+ E  GG   +     SP+R ++S+ + D +  SPELQPLPPL++   +
Sbjct: 186 YIGTMEPSRTSLSEANGGHSRELAPNKSPYRKLNSIKRSDRYRPSPELQPLPPLAKPPSM 245

Query: 245 NPSFETPLSDDESRETVFHTPEWSAAVSYGGGVF--PKSKRESRNHSLNVQAKGTSPLPY 261
           N       SD+ESRET FH+P+ S +VSY    +  P S++  ++++ N   K + P+P 
Sbjct: 246 NSPSAMDSSDEESRETAFHSPQCS-SVSYDDSYYYTPVSRQSGKSNNGNASVKSSIPMPS 305

[Close]

BLAST of Cla014021 vs. NCBI nr
Match: gi|659115778|ref|XP_008457732.1| (PREDICTED: formin-like protein 6 [Cucumis melo])

HSP 1 Score: 170.6 bits (431), Expect = 3.8e-39
Identity = 114/286 (39.86%), Postives = 152/286 (53.15%), Query Frame = 1


Query: 27  SQRRSLHQPLDPTTFS-------SPPSPPPPLGSADS-------------NQPTPAPSNV 86
           S RR LHQPL P           SPP PPPP   AD              +QP P+ SN 
Sbjct: 35  SYRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPADDQPFFHELPTSPDQSQPPPSSSNG 94

Query: 87  SLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERS 146
           ++P +P++T Q  KP KT+ I  SV IVTLGMLSALAFFLYR R K+  +S+ LV    +
Sbjct: 95  TMP-IPAATAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGSNN 154

Query: 147 LS-FRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPE 206
              F  DS  PPSSF   GT+E    S++E+ G  G + SSP+R ++S+ + D +  SPE
Sbjct: 155 PERFMEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGAN-SSPYRKLNSIKRSDRYRPSPE 214

Query: 207 LQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRES------ 266
           LQPLPPL +  +V        SD+ES +T FHTP+ S+ VS+  G F  + R S      
Sbjct: 215 LQPLPPLPKPPVVMSPPALSSSDEESLDTAFHTPQCSSIVSHEDGYFSPASRRSNSVKSC 274

Query: 267 -----RNHSLN-------VQAKGTSPLPYLEDSSIKQDAASTPPHP 274
                +N  +N         +K TSP      SS K++++   P P
Sbjct: 275 STATYKNDHINSNPPPPIPHSKRTSPKSRFSVSSTKRNSSQPQPPP 318

[Close]

BLAST of Cla014021 vs. NCBI nr
Match: gi|778669821|ref|XP_011649306.1| (PREDICTED: formin-like protein 6 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 4.2e-38
Identity = 119/311 (38.26%), Postives = 158/311 (50.80%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQ---RRSLHQPLDPTTFS-------SPPSPPPPLGSA 64
           F IFFL L          +  +S    RR LHQPL P           SPP PPPP   A
Sbjct: 11  FFIFFLPL-FFTFFTATALTFDSYIPYRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPA 70

Query: 65  DS-------------NQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSA 124
           D              +QP P+ SN ++P +P++T Q  KP KT+ I  SV IVTLGMLSA
Sbjct: 71  DDQPFFHELPTTPDQSQPPPSSSNGTMP-IPAATAQPSKPTKTVAIAISVGIVTLGMLSA 130

Query: 125 LAFFLYRQRIKYRCKSRMLVEKERSLS-FRPDSGIPPSSFLNFGTMERRPCSIIERKGGK 184
           LAFFLYR R K+  +S+ LV    +   F  DS  PPSSF   GT+E    S++E+ G  
Sbjct: 131 LAFFLYRHRAKHPGESQKLVGGSNNPERFVEDSRAPPSSFFYIGTVEPSQSSVVEQNGAN 190

Query: 185 GEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPE 244
           G + SSP+R ++S+ + D +  SPELQPLPPL +  +         SD+ES +T FHTP+
Sbjct: 191 GAN-SSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDEESLDTAFHTPQ 250

Query: 245 WSAAVSYGGGVFPKSKRES-----------RNHSLN-------VQAKGTSPLPYLEDSSI 274
            S+ VS+  G F  + R S           +N  +N         +K TSP      SS 
Sbjct: 251 CSSIVSHEDGYFSPASRRSNSVKSCSAASYKNDHMNSNPPPPIPHSKRTSPKSRFSVSST 310

[Close]

BLAST of Cla014021 vs. NCBI nr
Match: gi|225438990|ref|XP_002279613.1| (PREDICTED: formin-like protein 6 [Vitis vinifera])

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37
Identity = 121/296 (40.88%), Postives = 166/296 (56.08%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTF-----SSPPSPPP---------- 64
           F +FF+ L  L    H    A SQRR LHQPL P +       SPP PPP          
Sbjct: 6   FYLFFVLL--LSFSLHTAATALSQRRILHQPLFPDSSPPPGADSPPPPPPDSQVFPNPDQ 65

Query: 65  ------PLG-SADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSAL 124
                 P G + D++QP PA +N + P +P++TQ + KP K + I  SV IVTLGMLSAL
Sbjct: 66  PFFPEVPTGPTTDASQPPPATTNGTAP-IPTATQPT-KPTKKVAIAISVGIVTLGMLSAL 125

Query: 125 AFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGE 184
           AFFLYR R+K+  +S+ LV    S SF+ +S +PPSSFL  GT+E    S  E  G  G 
Sbjct: 126 AFFLYRHRVKHPGESQKLV-GGGSQSFQEESRVPPSSFLYIGTVEPSRRSGNEANGANGT 185

Query: 185 DQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFET-PLSDDESRETVFHTPEW 244
           +  SP+  ++S+ + D +  SPELQPLPPL+   + N S +    SD+E  ETVF+TP+ 
Sbjct: 186 N-GSPYHKLNSIKRSDRYRPSPELQPLPPLNNPPVRNNSPQAMSWSDEEGHETVFYTPQA 245

Query: 245 SAAVSYGGGVFPKSKRESR--NHSLNVQAK----GTSPLPYLEDSSIKQDAASTPP 272
           S+  +  G   P S++ S   N S    AK    GTSP+P+ + +S K   +++ P
Sbjct: 246 SSIGNDEGFYTPVSRQNSNSINSSSATPAKTESHGTSPVPHSKRTSPKSRRSASSP 295

The following BLAST results are available for this feature:

BLAST of Cla014021 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FH6_ARATH	5.5e-30	40.59	Formin-like protein 6 OS=Arabidopsis thaliana GN=FH6 PE=2 SV=1	[more]
FH8_ORYSJ	3.1e-09	26.15	Formin-like protein 8 OS=Oryza sativa subsp. japonica GN=FH8 PE=2 SV=1	[more]
FH9_ARATH	1.4e-06	28.26	Formin-like protein 9 OS=Arabidopsis thaliana GN=FH9 PE=2 SV=2	[more]

BLAST of Cla014021 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIH8_CUCSA	1.9e-122	82.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495090 PE=4 SV=1	[more]
W9RIZ3_9ROSA	1.2e-39	39.14	Formin-like protein OS=Morus notabilis GN=L484_009403 PE=3 SV=1	[more]
A0A0A0LJI8_CUCSA	2.9e-38	38.26	Formin-like protein OS=Cucumis sativus GN=Csa_2G271460 PE=3 SV=1	[more]
F6HST7_VITVI	1.4e-37	40.88	Formin-like protein OS=Vitis vinifera GN=VIT_07s0129g00220 PE=3 SV=1	[more]
K4BD43_SOLLC	2.4e-32	37.70	Formin-like protein OS=Solanum lycopersicum PE=3 SV=1	[more]

BLAST of Cla014021 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193400\|gb\|KGN48604.1\|	2.7e-122	82.93	hypothetical protein Csa_6G495090 [Cucumis sativus]	[more]
gi\|703123243\|ref\|XP_010102774.1\|	1.7e-39	39.14	Formin-like protein 6 [Morus notabilis]	[more]
gi\|659115778\|ref\|XP_008457732.1\|	3.8e-39	39.86	PREDICTED: formin-like protein 6 [Cucumis melo]	[more]
gi\|778669821\|ref\|XP_011649306.1\|	4.2e-38	38.26	PREDICTED: formin-like protein 6 [Cucumis sativus]	[more]
gi\|225438990\|ref\|XP_002279613.1\|	2.1e-37	40.88	PREDICTED: formin-like protein 6 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0044464	cell part
cellular_component	GO:0005634	nucleus
cellular_component	GO:0044446	intracellular organelle part
cellular_component	GO:0043232	intracellular non-membrane-bounded organelle
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0071944	cell periphery
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0005819	spindle
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005618	cell wall
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003779	actin binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU29337	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla014021	Cla014021.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU29337	WMU29337	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla014021	Cla97C01G016670	Watermelon (97103) v2	wmwmbB234
Cla014021	Csa6G495090	Cucumber (Chinese Long) v2	cuwmB500
Cla014021	MELO3C007626	Melon (DHL92) v3.5.1	mewmB570
Cla014021	ClCG01G017490	Watermelon (Charleston Gray)	wcgwmB141
Cla014021	Cucsa.103120	Cucumber (Gy14) v1	cgywmB136
Cla014021	CmaCh02G005310	Cucurbita maxima (Rimu)	cmawmB570
Cla014021	CmoCh02G005430	Cucurbita moschata (Rifu)	cmowmB565
Cla014021	Lsi01G009020	Bottle gourd (USVL1VR-Ls)	lsiwmB144
Cla014021	Cp4.1LG19g10860	Cucurbita pepo (Zucchini)	cpewmB482
Cla014021	Cp4.1LG05g11480	Cucurbita pepo (Zucchini)	cpewmB720
Cla014021	CsGy6G028310	Cucumber (Gy14) v2	cgybwmB468

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla014021	Cucumber (Chinese Long) v3	cucwmB150
Cla014021	Cucumber (Chinese Long) v3	cucwmB340
Cla014021	Cucumber (Chinese Long) v3	cucwmB526
Cla014021	Watermelon (97103) v2	wmwmbB280
Cla014021	Wax gourd	wgowmB339
Cla014021	Wax gourd	wgowmB426
Cla014021	Watermelon (97103) v1	wmwmB066
Cla014021	Cucumber (Gy14) v1	cgywmB635
Cla014021	Cucumber (Gy14) v1	cgywmB711
Cla014021	Cucurbita maxima (Rimu)	cmawmB034
Cla014021	Cucurbita maxima (Rimu)	cmawmB166
Cla014021	Cucurbita maxima (Rimu)	cmawmB632
Cla014021	Cucurbita maxima (Rimu)	cmawmB826
Cla014021	Cucurbita moschata (Rifu)	cmowmB026
Cla014021	Cucurbita moschata (Rifu)	cmowmB152
Cla014021	Cucurbita moschata (Rifu)	cmowmB623
Cla014021	Cucurbita moschata (Rifu)	cmowmB816
Cla014021	Melon (DHL92) v3.5.1	mewmB322
Cla014021	Melon (DHL92) v3.5.1	mewmB535
Cla014021	Watermelon (Charleston Gray)	wcgwmB418
Cla014021	Cucumber (Chinese Long) v2	cuwmB137
Cla014021	Cucumber (Chinese Long) v2	cuwmB328
Cla014021	Cucurbita pepo (Zucchini)	cpewmB073
Cla014021	Bottle gourd (USVL1VR-Ls)	lsiwmB327
Cla014021	Bottle gourd (USVL1VR-Ls)	lsiwmB488
Cla014021	Cucumber (Gy14) v2	cgybwmB131
Cla014021	Cucumber (Gy14) v2	cgybwmB302
Cla014021	Melon (DHL92) v3.6.1	medwmB319
Cla014021	Melon (DHL92) v3.6.1	medwmB520
Cla014021	Melon (DHL92) v3.6.1	medwmB559
Cla014021	Silver-seed gourd	carwmB0005
Cla014021	Silver-seed gourd	carwmB0407
Cla014021	Silver-seed gourd	carwmB0454
Cla014021	Silver-seed gourd	carwmB0774