Cla013994 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013994
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	U-box domain-containing protein 3 (AHRD V1 **-- A8MQL6_ARATH); contains Interpro domain(s) IPR011989 Armadillo-like helical
Location	Chr1 : 27199854 .. 27200822 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATAGCAACAGCTCAACGTCAAATATCATGCCAGCAACCATATGAAAGGATGGCTCATGAAATAGTTTCTTCTCCTGTACTAGAGGCTAGATCTGATCACATTGGCATTAAAGCAAAAGTTCAAAAGCTGGTTGAGGACTTGACGAGTGATTCACTTGAAACTTTAAGAACTACTACAGCTGAACTGCGGTTGCTCACCAAGATTAATGCCAATAACCGGAGGGTGATTGCAGACTATGGGGCAGTTAGCCTTTTGGTCAATTTGCTAAACTCTACAGACACTAAGATTCAAGAGAATGCTGTTACAGCACTTGTGAACTTATCAATTAACAATAATTGCAAAACTATCATTGTTCAGGCCAATGCAATTGAACCTTTGATTCACGTTCTTCAAACTGGAAGCTCGGAGGCAAAGGAGAACTCAGCTGCTACTCTTGGTAGTCTTTCCGTGGTTGATGATTACCAGGTCAACATTGGGAGGTCCGGGGCAATAGGGCCTCTGGTTGACTTGTTGAGGAATGGTACTCCTCAGGGAAAGAAAGATGCGGCTACCGCACTGTTTAATTTGTCCTTGCTTTCTGAAAACAAGGCAAAAATTGTGGAGGCTGGATCAATCAAGCATCTTGTGAAAATGATGGACCCAGCTACTGGAATGGTCGAGAAGGCAGTGGTTGTTCTGGCAAATCTTGCATCGATAGATGAAGGAAGGATCGAAATTGCACGTGAGGGTGGTATTGCTTTGTTGGTTGACACTATTGAGTTAGGTTCTGCCAGGGCAAAAGAATATGCAGCTGCAGCATTATTGTGGCTTTGTGCAATCACTCGTGGATTTTGCATCGTGGCAATCCAAGAGGGAGCTATCCCACCATTAGTGGCACTGTCACAAACAGGCACAGGACGGGCCAAGGAAAAGGTACATGGCTGCACTGAATTGTGTTTTCCTAAGGTTCCAAATTCGCAATAG

mRNA sequence

ATGTTGATAGCAACAGCTCAACGTCAAATATCATGCCAGCAACCATATGAAAGGATGGCTCATGAAATAGTTTCTTCTCCTGTACTAGAGGCTAGATCTGATCACATTGGCATTAAAGCAAAAGTTCAAAAGCTGGTTGAGGACTTGACGAGTGATTCACTTGAAACTTTAAGAACTACTACAGCTGAACTGCGGTTGCTCACCAAGATTAATGCCAATAACCGGAGGGTGATTGCAGACTATGGGGCAGTTAGCCTTTTGGTCAATTTGCTAAACTCTACAGACACTAAGATTCAAGAGAATGCTGTTACAGCACTTGTGAACTTATCAATTAACAATAATTGCAAAACTATCATTGTTCAGGCCAATGCAATTGAACCTTTGATTCACGTTCTTCAAACTGGAAGCTCGGAGGCAAAGGAGAACTCAGCTGCTACTCTTGGTAGTCTTTCCGTGGTTGATGATTACCAGGTCAACATTGGGAGGTCCGGGGCAATAGGGCCTCTGGTTGACTTGTTGAGGAATGGTACTCCTCAGGGAAAGAAAGATGCGGCTACCGCACTGTTTAATTTGTCCTTGCTTTCTGAAAACAAGGCAAAAATTGTGGAGGCTGGATCAATCAAGCATCTTGTGAAAATGATGGACCCAGCTACTGGAATGGTCGAGAAGGCAGTGGTTGTTCTGGCAAATCTTGCATCGATAGATGAAGGAAGGATCGAAATTGCACGTGAGGGTGGTATTGCTTTGTTGGTTGACACTATTGAGTTAGGTTCTGCCAGGGCAAAAGAATATGCAGCTGCAGCATTATTGTGGCTTTGTGCAATCACTCGTGGATTTTGCATCGTGGCAATCCAAGAGGGAGCTATCCCACCATTAGTGGCACTGTCACAAACAGGCACAGGACGGGCCAAGGAAAAGGTACATGGCTGCACTGAATTGTGTTTTCCTAAGGTTCCAAATTCGCAATAG

Coding sequence (CDS)

ATGTTGATAGCAACAGCTCAACGTCAAATATCATGCCAGCAACCATATGAAAGGATGGCTCATGAAATAGTTTCTTCTCCTGTACTAGAGGCTAGATCTGATCACATTGGCATTAAAGCAAAAGTTCAAAAGCTGGTTGAGGACTTGACGAGTGATTCACTTGAAACTTTAAGAACTACTACAGCTGAACTGCGGTTGCTCACCAAGATTAATGCCAATAACCGGAGGGTGATTGCAGACTATGGGGCAGTTAGCCTTTTGGTCAATTTGCTAAACTCTACAGACACTAAGATTCAAGAGAATGCTGTTACAGCACTTGTGAACTTATCAATTAACAATAATTGCAAAACTATCATTGTTCAGGCCAATGCAATTGAACCTTTGATTCACGTTCTTCAAACTGGAAGCTCGGAGGCAAAGGAGAACTCAGCTGCTACTCTTGGTAGTCTTTCCGTGGTTGATGATTACCAGGTCAACATTGGGAGGTCCGGGGCAATAGGGCCTCTGGTTGACTTGTTGAGGAATGGTACTCCTCAGGGAAAGAAAGATGCGGCTACCGCACTGTTTAATTTGTCCTTGCTTTCTGAAAACAAGGCAAAAATTGTGGAGGCTGGATCAATCAAGCATCTTGTGAAAATGATGGACCCAGCTACTGGAATGGTCGAGAAGGCAGTGGTTGTTCTGGCAAATCTTGCATCGATAGATGAAGGAAGGATCGAAATTGCACGTGAGGGTGGTATTGCTTTGTTGGTTGACACTATTGAGTTAGGTTCTGCCAGGGCAAAAGAATATGCAGCTGCAGCATTATTGTGGCTTTGTGCAATCACTCGTGGATTTTGCATCGTGGCAATCCAAGAGGGAGCTATCCCACCATTAGTGGCACTGTCACAAACAGGCACAGGACGGGCCAAGGAAAAGGTACATGGCTGCACTGAATTGTGTTTTCCTAAGGTTCCAAATTCGCAATAG

Protein sequence

MLIATAQRQISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELRLLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAIEPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAATALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREGGIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKEKVHGCTELCFPKVPNSQ

Homology

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BLAST of Cla013994 vs. Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3)

HSP 1 Score: 350.1 bits (897), Expect = 2.5e-95
Identity = 188/294 (63.95%), Postives = 230/294 (78.23%), Query Frame = 1


Query: 13  QQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELRLLTKINA 72
           ++P ER+   IVS+P  E R D   ++ +V+KLVE+L S SL+T R  TAELRLL K N 
Sbjct: 514 RRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNM 573

Query: 73  NNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAIEPLIHVL 132
           +NR VI + GA+ LLV LL STD+  QENAVTAL+NLSIN+N K  I  A AIEPLIHVL
Sbjct: 574 DNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVL 633

Query: 133 QTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAATALFNLS 192
           + GSSEAKENSAATL SLSV+++ ++ IG+SGAIGPLVDLL NGTP+GKKDAATALFNLS
Sbjct: 634 ENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLS 693

Query: 193 LLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREGGIALLVD 252
           +  ENKA IV++G++++L+ +MDPA GMV+KAV VLANLA+I EGR  I +EGGI LLV+
Sbjct: 694 IHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVE 753

Query: 253 TIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKEK 307
            +ELGSAR KE AAAALL L   +  FC + +QEGA+PPLVALSQ+GT RA+EK
Sbjct: 754 VVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREK 807

[Close]

BLAST of Cla013994 vs. Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.9e-81
Identity = 165/285 (57.89%), Postives = 214/285 (75.09%), Query Frame = 1


Query: 23  IVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELRLLTKINANNRRVIADYG 82
           I+ + V E  S    I+ +V+KL++DL S SL+T R  TA +R+L + + +NR VIA   
Sbjct: 405 IIPATVRETGSSS-SIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCE 464

Query: 83  AVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAIEPLIHVLQTGS-SEAKE 142
           A+  LV+LL STD +IQ +AVT L+NLSIN+N K++I ++ AI PLIHVL+TG   EAK 
Sbjct: 465 AIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKA 524

Query: 143 NSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAATALFNLSLLSENKAKI 202
           NSAATL SLSV+++Y+  IG +GAI PLVDLL +G+  GKKDAATALFNLS+  ENK K+
Sbjct: 525 NSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKV 584

Query: 203 VEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREGGIALLVDTIELGSARA 262
           +EAG++++LV++MDPA GMVEKAVVVLANLA++ EG+I I  EGGI +LV+ +ELGSAR 
Sbjct: 585 IEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARG 644

Query: 263 KEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKEK 307
           KE A AALL LC  +  FC   I+EG IPPLVAL+++GT R KEK
Sbjct: 645 KENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEK 688

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BLAST of Cla013994 vs. Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2)

HSP 1 Score: 260.0 bits (663), Expect = 3.4e-68
Identity = 153/297 (51.52%), Postives = 201/297 (67.68%), Query Frame = 1


Query: 11  SCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELRLLTKI 70
           S  + YE   H++  S  +          +   KLVEDL S S +      AE+R LT  
Sbjct: 451 SAAKTYECSVHDLDDSGTMTT--------SHTIKLVEDLKSGSNKVKTAAAAEIRHLTIN 510

Query: 71  NANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAIEPLIH 130
           +  NR  I   GA++ L++LL S +   QE+AVTAL+NLSI+   K +IV+  AIEPL+H
Sbjct: 511 SIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVH 570

Query: 131 VLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGA-IGPLVDLLRNGTPQGKKDAATALF 190
           VL TG+  AKENSAA+L SLSV+   +  IG+S A I  LV+LL  GT +GKKDAA+ALF
Sbjct: 571 VLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALF 630

Query: 191 NLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREGGIAL 250
           NLS+  +NKA+IV+A ++K+LV+++DP   MV+KAV +LANL+++ EGR  I REGGI L
Sbjct: 631 NLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPL 690

Query: 251 LVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKEK 307
           LV+T++LGS R KE AA+ LL LC  +  FC + +QEGAIPPLVALSQ+GT RAKEK
Sbjct: 691 LVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEK 739

HSP 2 Score: 53.9 bits (128), Expect = 3.7e-06
Identity = 35/127 (27.56%), Postives = 63/127 (49.61%), Query Frame = 1


Query: 38  IKAKVQKLVEDLTSDSLETLRTTTAELRLLTKINANNRRVIADYGAVSLLVNLLNSTDTK 97
           ++AK  K + +L    LE +    A L  L+ +    + ++ + G + LLV  ++    +
Sbjct: 635 VQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVRE-GGIPLLVETVDLGSQR 694

Query: 98  IQENAVTALVNLSINN-NCKTIIVQANAIEPLIHVLQTGSSEAKENSAATLGSLSVVDDY 157
            +ENA + L+ L +N+    T+++Q  AI PL+ + Q+G+  AKE +   L       D 
Sbjct: 695 GKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDA 754

Query: 158 QVNIGRS 164
           ++  GRS
Sbjct: 755 RMKKGRS 760

[Close]

BLAST of Cla013994 vs. Swiss-Prot
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.9e-59
Identity = 135/281 (48.04%), Postives = 184/281 (65.48%), Query Frame = 1


Query: 34  DHIGIKAKVQKLVEDLTSDSLETLRTTTAELRLLTKINANNRRVIADYGAVSLLVNLLNS 93
           DH G+ +    L+  L S + +  R    E+RLL K N NNR  IA+ GA+ LLVNLL+S
Sbjct: 321 DHAGLVS----LMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSS 380

Query: 94  TDTKIQENAVTALVNLSINNNCKTIIVQANAIEPLIHVLQTGSSEAKENSAATLGSLSVV 153
           +D + QE+AVTAL+NLSI+ N K  IV ++AI  ++ VL+TGS E +EN+AATL SLSVV
Sbjct: 381 SDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVV 440

Query: 154 DDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAATALFNLSLLSENKAKIVEAGSIKHLVK- 213
           D+ +V IG +GAI PL++LL +G+P+GKKDAATA+FNL +   NK + V+AG + HL+  
Sbjct: 441 DENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNF 500

Query: 214 MMDPATGMVEKAVVVLANLASIDEGRIEIAREGGIALLVDTIELGSARAKEYAAAALLWL 273
           ++DP  GM+++A+ +L+ LA   EG+I IAR   I  LV+ I+ GS R +E AAA L  L
Sbjct: 501 LVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLL 560

Query: 274 CAITRGFCIVAIQEGAIPPLVALSQTGTGRAKEKVHGCTEL 314
           C+      + A   G    L  LS+TGT RAK K     EL
Sbjct: 561 CSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILEL 597

[Close]

BLAST of Cla013994 vs. Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-54
Identity = 126/267 (47.19%), Postives = 172/267 (64.42%), Query Frame = 1


Query: 41  KVQKLVEDLTSDSLETLRTTTAELRLLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQE 100
           K++ L+  L   + E  R+   E+RLL K NA+NR  IA+ GA+ LLV LL++ D++IQE
Sbjct: 353 KIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQE 412

Query: 101 NAVTALVNLSINNNCKTIIVQANAIEPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNI 160
           ++VTAL+NLSI  N K  IV A AI  ++ VL+ GS EA+EN+AATL SLSV+D+ +V I
Sbjct: 413 HSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTI 472

Query: 161 GRSGAIGPLVDLLRNGTPQGKKDAATALFNLSLLSENKAKIVEAGSIKHLVKMM-DPATG 220
           G  GAI PLV LL  GT +GKKDAATALFNL +   NK K + AG I  L +++ +P +G
Sbjct: 473 GALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSG 532

Query: 221 MVEKAVVVLANLASIDEGRIEIAREGGIALLVDTIELGSARAKEYAAAALLWLCAITRGF 280
           MV++A+ +LA L+S  EG+  I     +  LV+ I  GS R +E AAA L+ LC+     
Sbjct: 533 MVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQH 592

Query: 281 CIVAIQEGAIPPLVALSQTGTGRAKEK 307
            + A + G + PL+ L+  GT R K K
Sbjct: 593 LVEAQKLGLMGPLIDLAGNGTDRGKRK 619

HSP 2 Score: 69.7 bits (169), Expect = 6.6e-11
Identity = 54/183 (29.51%), Postives = 82/183 (44.81%), Query Frame = 1


Query: 17  ERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELRLLTKINANNRR 76
           E  A  + S  V++     IG    +  LV  L   +    +     L  L     N  +
Sbjct: 453 ENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGK 512

Query: 77  VIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAIEPLIHVLQTGS 136
            I   G +  L  LL    + + + A+  L  LS +   K II  ++A+  L+  ++TGS
Sbjct: 513 AIRA-GVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGS 572

Query: 137 SEAKENSAATLGSLSVVD-DYQVNIGRSGAIGPLVDLLRNGTPQGKKDAATALFNLSLLS 196
              +EN+AA L  L   D  + V   + G +GPL+DL  NGT +GK+ AA  L  +S L+
Sbjct: 573 PRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLA 632

Query: 197 ENK 199
           E +
Sbjct: 633 EQQ 634

HSP 3 Score: 67.8 bits (164), Expect = 2.5e-10
Identity = 62/230 (26.96%), Postives = 104/230 (45.22%), Query Frame = 1


Query: 17  ERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELRLLTKINANNRR 76
           E     +++  + E     I     +  +V+ L   S+E      A L  L+ I+  N+ 
Sbjct: 412 EHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVID-ENKV 471

Query: 77  VIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAIEPLIHVLQTGS 136
            I   GA+  LV LLN    + +++A TAL NL I    K   ++A  I  L  +L    
Sbjct: 472 TIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPG 531

Query: 137 SEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAATALFNLSLLSE 196
           S   + + A L  LS   + +  IG S A+  LV+ +R G+P+ +++AA  L  + L S 
Sbjct: 532 SGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVL--VHLCSG 591

Query: 197 NKAKIVEAGSIKHLVKMMDPATGMVE----KAVVVLANLASIDEGRIEIA 243
           +   +VEA  +  +  ++D A    +    KA  +L  ++ + E + E A
Sbjct: 592 DPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETA 638

[Close]

BLAST of Cla013994 vs. TrEMBL
Match: A0A0A0KFV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G493830 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 3.1e-140
Identity = 268/312 (85.90%), Postives = 285/312 (91.35%), Query Frame = 1


Query: 6   AQRQISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELR 65
           A+ QI CQQPYERM HEIVSSPVLEA SDH GIKAKVQKLVE+LTSDS ETLRT+TAELR
Sbjct: 4   AKSQIPCQQPYERMVHEIVSSPVLEAISDHTGIKAKVQKLVENLTSDSPETLRTSTAELR 63

Query: 66  LLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAI 125
           LLTKI+ANNR +IADYGA+SLLVNLLNSTDTKIQENAVTALVNLSI+NNCK+IIVQANAI
Sbjct: 64  LLTKIDANNRTLIADYGAISLLVNLLNSTDTKIQENAVTALVNLSIDNNCKSIIVQANAI 123

Query: 126 EPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAA 185
           EPLIHVLQTGS EAKENSAATLGSLSVVDD QVNIGRS AIGPLVDLL++GTP+GK+DAA
Sbjct: 124 EPLIHVLQTGSPEAKENSAATLGSLSVVDDNQVNIGRSRAIGPLVDLLKDGTPRGKRDAA 183

Query: 186 TALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREG 245
           TALFNLSLLSENK KIVEAGSIKHLVK+MDPATGMVEKAV VLANLAS DEGRIEI REG
Sbjct: 184 TALFNLSLLSENKPKIVEAGSIKHLVKLMDPATGMVEKAVTVLANLASTDEGRIEIVREG 243

Query: 246 GIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKE 305
           GI LLVDTIELGSARAKEYAAAALLWLC IT  +CI+AIQEGAIPPLVALSQ+GT RAKE
Sbjct: 244 GIPLLVDTIELGSARAKEYAAAALLWLCGITSRYCIMAIQEGAIPPLVALSQSGTARAKE 303

Query: 306 KVHGCTELCFPK 318
           K       CF +
Sbjct: 304 KARALLS-CFSR 314

[Close]

BLAST of Cla013994 vs. TrEMBL
Match: U5GAH5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10280g PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 6.7e-103
Identity = 205/309 (66.34%), Postives = 248/309 (80.26%), Query Frame = 1


Query: 2   LIATAQR-QISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTT 61
           L+ T  R Q + ++P +R+   IVSSP +E R+D  GI+ +V+KLVEDL S S++  R  
Sbjct: 516 LVDTRSRSQTAWRRPSDRLVPRIVSSPAIETRADLAGIEMEVRKLVEDLRSTSIDIQRDA 575

Query: 62  TAELRLLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIV 121
           TA+LRLL K N +NR VIA+ G++ LLVNLL STD KIQENAVTAL+NLSIN+N KT I 
Sbjct: 576 TAKLRLLAKHNMDNRIVIANCGSIGLLVNLLCSTDKKIQENAVTALLNLSINDNNKTAIA 635

Query: 122 QANAIEPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQG 181
            A+AIEPLIHVL+TGS EAKENSAATL SLSV++D +V IGRSGA+GPLVDLL NGTP+G
Sbjct: 636 NADAIEPLIHVLETGSPEAKENSAATLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRG 695

Query: 182 KKDAATALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIE 241
           KKDAATALFNLS+  ENKA+IVEAG++KHLV +MDPA GMV+KAV VLANLA+I EGR  
Sbjct: 696 KKDAATALFNLSIFHENKARIVEAGAVKHLVDLMDPAAGMVDKAVAVLANLATIPEGRNA 755

Query: 242 IAREGGIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGT 301
           I +EGGI +LV+ +ELGS R KE AAAALL LC  +  FC + +QEGA+PPLVALSQ+GT
Sbjct: 756 IGQEGGIPVLVEVVELGSVRGKENAAAALLQLCTNSSRFCHMVLQEGAVPPLVALSQSGT 815

Query: 302 GRAKEKVHG 310
            RAKEKV G
Sbjct: 816 PRAKEKVQG 824

[Close]

BLAST of Cla013994 vs. TrEMBL
Match: A0A067K7D1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12488 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 8.7e-103
Identity = 201/301 (66.78%), Postives = 245/301 (81.40%), Query Frame = 1


Query: 6   AQRQISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELR 65
           ++ Q   ++P +R+   IVSSP +E R D  G++ +V+KL+EDL SDS++  R  T+ELR
Sbjct: 378 SRSQTIWRRPSDRLVPRIVSSPAIETRVDLSGVETQVRKLIEDLNSDSVDIQREATSELR 437

Query: 66  LLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAI 125
           LL K N +NR VIA  GA+SLLVNLL STD++IQENAVTAL+NLSIN+N KT I  A+AI
Sbjct: 438 LLAKHNMDNRIVIAQCGAISLLVNLLRSTDSRIQENAVTALLNLSINDNNKTAIANADAI 497

Query: 126 EPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAA 185
           EPLIHVL TGS EAKENSAATL SLSV++D +V IGRSGAIGPLVDLL NGTP+GKKDAA
Sbjct: 498 EPLIHVLVTGSPEAKENSAATLFSLSVIEDNKVRIGRSGAIGPLVDLLGNGTPRGKKDAA 557

Query: 186 TALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREG 245
           TALFNLS+  ENKA+IV+AG++KHLV++MDPA GMV+KAV VLANLA+I EGR+ I +EG
Sbjct: 558 TALFNLSIFHENKARIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGRVAIGQEG 617

Query: 246 GIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKE 305
           GI +LV+ +ELGSAR KE AAAALL LC  +  FC   +QEGA+PPLVALSQ+GT RAKE
Sbjct: 618 GIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCNNVLQEGAVPPLVALSQSGTPRAKE 677

Query: 306 K 307
           K
Sbjct: 678 K 678

[Close]

BLAST of Cla013994 vs. TrEMBL
Match: U5G4K7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10280g PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 3.3e-102
Identity = 204/307 (66.45%), Postives = 247/307 (80.46%), Query Frame = 1


Query: 2   LIATAQR-QISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTT 61
           L+ T  R Q + ++P +R+   IVSSP +E R+D  GI+ +V+KLVEDL S S++  R  
Sbjct: 516 LVDTRSRSQTAWRRPSDRLVPRIVSSPAIETRADLAGIEMEVRKLVEDLRSTSIDIQRDA 575

Query: 62  TAELRLLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIV 121
           TA+LRLL K N +NR VIA+ G++ LLVNLL STD KIQENAVTAL+NLSIN+N KT I 
Sbjct: 576 TAKLRLLAKHNMDNRIVIANCGSIGLLVNLLCSTDKKIQENAVTALLNLSINDNNKTAIA 635

Query: 122 QANAIEPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQG 181
            A+AIEPLIHVL+TGS EAKENSAATL SLSV++D +V IGRSGA+GPLVDLL NGTP+G
Sbjct: 636 NADAIEPLIHVLETGSPEAKENSAATLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRG 695

Query: 182 KKDAATALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIE 241
           KKDAATALFNLS+  ENKA+IVEAG++KHLV +MDPA GMV+KAV VLANLA+I EGR  
Sbjct: 696 KKDAATALFNLSIFHENKARIVEAGAVKHLVDLMDPAAGMVDKAVAVLANLATIPEGRNA 755

Query: 242 IAREGGIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGT 301
           I +EGGI +LV+ +ELGS R KE AAAALL LC  +  FC + +QEGA+PPLVALSQ+GT
Sbjct: 756 IGQEGGIPVLVEVVELGSVRGKENAAAALLQLCTNSSRFCHMVLQEGAVPPLVALSQSGT 815

Query: 302 GRAKEKV 308
            RAKEKV
Sbjct: 816 PRAKEKV 822

[Close]

BLAST of Cla013994 vs. TrEMBL
Match: B9SG36_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1154930 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 7.4e-102
Identity = 198/301 (65.78%), Postives = 243/301 (80.73%), Query Frame = 1


Query: 6   AQRQISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELR 65
           ++ Q   ++P +R+   IVSSP +E R+D  G++ +V+ LVEDL SDS++  R  TAELR
Sbjct: 481 SRSQTIWRRPSDRLIPRIVSSPAIETRADLSGVETQVRNLVEDLKSDSIDVQRAATAELR 540

Query: 66  LLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAI 125
           LL K N +NR VIA+ GA+++LVNLL S D KIQENAVTAL+NLSIN+N KT I  A+AI
Sbjct: 541 LLAKHNMDNRIVIANCGAINILVNLLRSADAKIQENAVTALLNLSINDNNKTAIANADAI 600

Query: 126 EPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAA 185
            PLIHVL+TGS EAKENSAATL SLSV++D +V IGRSGA+GPLVDLL NGTP+GKKDAA
Sbjct: 601 GPLIHVLETGSPEAKENSAATLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRGKKDAA 660

Query: 186 TALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREG 245
           TALFNLS+  ENKA+IV+AG++KHLV++MDPA GMV+KAV VLANLA+I EGR  I +EG
Sbjct: 661 TALFNLSIFHENKARIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGQEG 720

Query: 246 GIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKE 305
           GI +LV+ +ELGSAR KE AAAALL LC  +  FC   +QEGA+PPLVALSQ+GT RAKE
Sbjct: 721 GIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGAVPPLVALSQSGTPRAKE 780

Query: 306 K 307
           K
Sbjct: 781 K 781

[Close]

BLAST of Cla013994 vs. NCBI nr
Match: gi|659079591|ref|XP_008440337.1| (PREDICTED: U-box domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 507.7 bits (1306), Expect = 1.5e-140
Identity = 270/312 (86.54%), Postives = 285/312 (91.35%), Query Frame = 1


Query: 6   AQRQISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELR 65
           A+ QISCQQPYERM HEIVS+PVLE  SD  GIKAKVQKLVEDL SDSLETLRT+TAELR
Sbjct: 4   AKSQISCQQPYERMVHEIVSTPVLEVISDLTGIKAKVQKLVEDLRSDSLETLRTSTAELR 63

Query: 66  LLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAI 125
           LLTKI+ANN  VIADYGA+SLLVNLLNSTDTKIQENAVTALVNLSI+NNCKTIIVQANAI
Sbjct: 64  LLTKIDANNWTVIADYGAISLLVNLLNSTDTKIQENAVTALVNLSIDNNCKTIIVQANAI 123

Query: 126 EPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAA 185
           EPLIHVLQTGS EAKENSAATLGSLSVVDD QVNIGRSGAIGPLVDLL++GTP+GK+DAA
Sbjct: 124 EPLIHVLQTGSPEAKENSAATLGSLSVVDDNQVNIGRSGAIGPLVDLLKDGTPRGKRDAA 183

Query: 186 TALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREG 245
           TALFNLSLLSENK KIVEAGSIKHLVK+MDPATGMVEKAV VLANLAS DEGRIEI REG
Sbjct: 184 TALFNLSLLSENKPKIVEAGSIKHLVKLMDPATGMVEKAVTVLANLASTDEGRIEIVREG 243

Query: 246 GIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKE 305
           GIALLVDTIELGSARAKEYAAAALLWLC IT  +CI+AIQEGAIPPLVALSQ+GT RAKE
Sbjct: 244 GIALLVDTIELGSARAKEYAAAALLWLCGITSRYCIMAIQEGAIPPLVALSQSGTARAKE 303

Query: 306 KVHGCTELCFPK 318
           K       CF +
Sbjct: 304 KARALL-TCFSR 314

[Close]

BLAST of Cla013994 vs. NCBI nr
Match: gi|449448276|ref|XP_004141892.1| (PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 4.4e-140
Identity = 268/312 (85.90%), Postives = 285/312 (91.35%), Query Frame = 1


Query: 6   AQRQISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELR 65
           A+ QI CQQPYERM HEIVSSPVLEA SDH GIKAKVQKLVE+LTSDS ETLRT+TAELR
Sbjct: 4   AKSQIPCQQPYERMVHEIVSSPVLEAISDHTGIKAKVQKLVENLTSDSPETLRTSTAELR 63

Query: 66  LLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAI 125
           LLTKI+ANNR +IADYGA+SLLVNLLNSTDTKIQENAVTALVNLSI+NNCK+IIVQANAI
Sbjct: 64  LLTKIDANNRTLIADYGAISLLVNLLNSTDTKIQENAVTALVNLSIDNNCKSIIVQANAI 123

Query: 126 EPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAA 185
           EPLIHVLQTGS EAKENSAATLGSLSVVDD QVNIGRS AIGPLVDLL++GTP+GK+DAA
Sbjct: 124 EPLIHVLQTGSPEAKENSAATLGSLSVVDDNQVNIGRSRAIGPLVDLLKDGTPRGKRDAA 183

Query: 186 TALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREG 245
           TALFNLSLLSENK KIVEAGSIKHLVK+MDPATGMVEKAV VLANLAS DEGRIEI REG
Sbjct: 184 TALFNLSLLSENKPKIVEAGSIKHLVKLMDPATGMVEKAVTVLANLASTDEGRIEIVREG 243

Query: 246 GIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKE 305
           GI LLVDTIELGSARAKEYAAAALLWLC IT  +CI+AIQEGAIPPLVALSQ+GT RAKE
Sbjct: 244 GIPLLVDTIELGSARAKEYAAAALLWLCGITSRYCIMAIQEGAIPPLVALSQSGTARAKE 303

Query: 306 KVHGCTELCFPK 318
           K       CF +
Sbjct: 304 KARALLS-CFSR 314

[Close]

BLAST of Cla013994 vs. NCBI nr
Match: gi|566180543|ref|XP_006380663.1| (hypothetical protein POPTR_0007s10280g [Populus trichocarpa])

HSP 1 Score: 382.1 bits (980), Expect = 9.6e-103
Identity = 205/309 (66.34%), Postives = 248/309 (80.26%), Query Frame = 1


Query: 2   LIATAQR-QISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTT 61
           L+ T  R Q + ++P +R+   IVSSP +E R+D  GI+ +V+KLVEDL S S++  R  
Sbjct: 516 LVDTRSRSQTAWRRPSDRLVPRIVSSPAIETRADLAGIEMEVRKLVEDLRSTSIDIQRDA 575

Query: 62  TAELRLLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIV 121
           TA+LRLL K N +NR VIA+ G++ LLVNLL STD KIQENAVTAL+NLSIN+N KT I 
Sbjct: 576 TAKLRLLAKHNMDNRIVIANCGSIGLLVNLLCSTDKKIQENAVTALLNLSINDNNKTAIA 635

Query: 122 QANAIEPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQG 181
            A+AIEPLIHVL+TGS EAKENSAATL SLSV++D +V IGRSGA+GPLVDLL NGTP+G
Sbjct: 636 NADAIEPLIHVLETGSPEAKENSAATLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRG 695

Query: 182 KKDAATALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIE 241
           KKDAATALFNLS+  ENKA+IVEAG++KHLV +MDPA GMV+KAV VLANLA+I EGR  
Sbjct: 696 KKDAATALFNLSIFHENKARIVEAGAVKHLVDLMDPAAGMVDKAVAVLANLATIPEGRNA 755

Query: 242 IAREGGIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGT 301
           I +EGGI +LV+ +ELGS R KE AAAALL LC  +  FC + +QEGA+PPLVALSQ+GT
Sbjct: 756 IGQEGGIPVLVEVVELGSVRGKENAAAALLQLCTNSSRFCHMVLQEGAVPPLVALSQSGT 815

Query: 302 GRAKEKVHG 310
            RAKEKV G
Sbjct: 816 PRAKEKVQG 824

[Close]

BLAST of Cla013994 vs. NCBI nr
Match: gi|643722148|gb|KDP32027.1| (hypothetical protein JCGZ_12488 [Jatropha curcas])

HSP 1 Score: 381.7 bits (979), Expect = 1.3e-102
Identity = 201/301 (66.78%), Postives = 245/301 (81.40%), Query Frame = 1


Query: 6   AQRQISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELR 65
           ++ Q   ++P +R+   IVSSP +E R D  G++ +V+KL+EDL SDS++  R  T+ELR
Sbjct: 378 SRSQTIWRRPSDRLVPRIVSSPAIETRVDLSGVETQVRKLIEDLNSDSVDIQREATSELR 437

Query: 66  LLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAI 125
           LL K N +NR VIA  GA+SLLVNLL STD++IQENAVTAL+NLSIN+N KT I  A+AI
Sbjct: 438 LLAKHNMDNRIVIAQCGAISLLVNLLRSTDSRIQENAVTALLNLSINDNNKTAIANADAI 497

Query: 126 EPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAA 185
           EPLIHVL TGS EAKENSAATL SLSV++D +V IGRSGAIGPLVDLL NGTP+GKKDAA
Sbjct: 498 EPLIHVLVTGSPEAKENSAATLFSLSVIEDNKVRIGRSGAIGPLVDLLGNGTPRGKKDAA 557

Query: 186 TALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREG 245
           TALFNLS+  ENKA+IV+AG++KHLV++MDPA GMV+KAV VLANLA+I EGR+ I +EG
Sbjct: 558 TALFNLSIFHENKARIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGRVAIGQEG 617

Query: 246 GIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKE 305
           GI +LV+ +ELGSAR KE AAAALL LC  +  FC   +QEGA+PPLVALSQ+GT RAKE
Sbjct: 618 GIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCNNVLQEGAVPPLVALSQSGTPRAKE 677

Query: 306 K 307
           K
Sbjct: 678 K 678

[Close]

BLAST of Cla013994 vs. NCBI nr
Match: gi|802645019|ref|XP_012079340.1| (PREDICTED: U-box domain-containing protein 4 [Jatropha curcas])

HSP 1 Score: 381.7 bits (979), Expect = 1.3e-102
Identity = 201/301 (66.78%), Postives = 245/301 (81.40%), Query Frame = 1


Query: 6   AQRQISCQQPYERMAHEIVSSPVLEARSDHIGIKAKVQKLVEDLTSDSLETLRTTTAELR 65
           ++ Q   ++P +R+   IVSSP +E R D  G++ +V+KL+EDL SDS++  R  T+ELR
Sbjct: 517 SRSQTIWRRPSDRLVPRIVSSPAIETRVDLSGVETQVRKLIEDLNSDSVDIQREATSELR 576

Query: 66  LLTKINANNRRVIADYGAVSLLVNLLNSTDTKIQENAVTALVNLSINNNCKTIIVQANAI 125
           LL K N +NR VIA  GA+SLLVNLL STD++IQENAVTAL+NLSIN+N KT I  A+AI
Sbjct: 577 LLAKHNMDNRIVIAQCGAISLLVNLLRSTDSRIQENAVTALLNLSINDNNKTAIANADAI 636

Query: 126 EPLIHVLQTGSSEAKENSAATLGSLSVVDDYQVNIGRSGAIGPLVDLLRNGTPQGKKDAA 185
           EPLIHVL TGS EAKENSAATL SLSV++D +V IGRSGAIGPLVDLL NGTP+GKKDAA
Sbjct: 637 EPLIHVLVTGSPEAKENSAATLFSLSVIEDNKVRIGRSGAIGPLVDLLGNGTPRGKKDAA 696

Query: 186 TALFNLSLLSENKAKIVEAGSIKHLVKMMDPATGMVEKAVVVLANLASIDEGRIEIAREG 245
           TALFNLS+  ENKA+IV+AG++KHLV++MDPA GMV+KAV VLANLA+I EGR+ I +EG
Sbjct: 697 TALFNLSIFHENKARIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGRVAIGQEG 756

Query: 246 GIALLVDTIELGSARAKEYAAAALLWLCAITRGFCIVAIQEGAIPPLVALSQTGTGRAKE 305
           GI +LV+ +ELGSAR KE AAAALL LC  +  FC   +QEGA+PPLVALSQ+GT RAKE
Sbjct: 757 GIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCNNVLQEGAVPPLVALSQSGTPRAKE 816

Query: 306 K 307
           K
Sbjct: 817 K 817

The following BLAST results are available for this feature:

BLAST of Cla013994 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUB4_ARATH	2.5e-95	63.95	U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3	[more]
PUB2_ARATH	7.9e-81	57.89	U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1	[more]
PUB3_ARATH	3.4e-68	51.52	U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2	[more]
PUB12_ORYSJ	2.9e-59	48.04	U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2...	[more]
PUB13_ARATH	1.3e-54	47.19	U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=1 SV=1	[more]

BLAST of Cla013994 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFV9_CUCSA	3.1e-140	85.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G493830 PE=4 SV=1	[more]
U5GAH5_POPTR	6.7e-103	66.34	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10280g PE=4 SV=1	[more]
A0A067K7D1_JATCU	8.7e-103	66.78	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12488 PE=4 SV=1	[more]
U5G4K7_POPTR	3.3e-102	66.45	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10280g PE=4 SV=1	[more]
B9SG36_RICCO	7.4e-102	65.78	Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1154930 PE=4 SV=1	[more]

BLAST of Cla013994 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079591\|ref\|XP_008440337.1\|	1.5e-140	86.54	PREDICTED: U-box domain-containing protein 4 [Cucumis melo]	[more]
gi\|449448276\|ref\|XP_004141892.1\|	4.4e-140	85.90	PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]	[more]
gi\|566180543\|ref\|XP_006380663.1\|	9.6e-103	66.34	hypothetical protein POPTR_0007s10280g [Populus trichocarpa]	[more]
gi\|643722148\|gb\|KDP32027.1\|	1.3e-102	66.78	hypothetical protein JCGZ_12488 [Jatropha curcas]	[more]
gi\|802645019\|ref\|XP_012079340.1\|	1.3e-102	66.78	PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000225	Armadillo
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0005488	binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU08982	watermelon EST collection version 2.0	transcribed_cluster
WMU48941	watermelon EST collection version 2.0	transcribed_cluster
WMU64563	watermelon EST collection version 2.0	transcribed_cluster
WMU66261	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013994	Cla013994.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU64563	WMU64563	transcribed_cluster
WMU66261	WMU66261	transcribed_cluster
WMU08982	WMU08982	transcribed_cluster
WMU48941	WMU48941	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 72..110 score: 4.7E-11coord: 160..192 score: 3.9E-5coord: 112..151 score: 1.1E-6coord: 195..233 score: 1.
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 194..233 score: 0.0055coord: 153..193 score: 12.0coord: 71..111 score: 5.4E-5coord: 112..152 score: 0.015coord: 234..274 score:
IPR000225	Armadillo	PROFILE	PS50176	ARM_REPEAT	coord: 205..246 score: 10.132coord: 82..124 score: 13.282coord: 164..206 score: 10
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 38..306 score: 1.3
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 42..306 score: 6.1
None	No IPR available	PANTHER	PTHR23315	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	coord: 6..306 score: 5.1E
None	No IPR available	PANTHER	PTHR23315:SF117	SUBFAMILY NOT NAMED	coord: 6..306 score: 5.1E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013994	Silver-seed gourd	carwmB0005
Cla013994	Silver-seed gourd	carwmB0176
Cla013994	Silver-seed gourd	carwmB0407
Cla013994	Cucumber (Chinese Long) v3	cucwmB150
Cla013994	Cucumber (Chinese Long) v3	cucwmB526
Cla013994	Watermelon (97103) v2	wmwmbB234
Cla013994	Watermelon (97103) v2	wmwmbB280
Cla013994	Wax gourd	wgowmB339
Cla013994	Wax gourd	wgowmB426
Cla013994	Watermelon (97103) v1	wmwmB066
Cla013994	Cucumber (Gy14) v1	cgywmB136
Cla013994	Cucumber (Gy14) v1	cgywmB711
Cla013994	Cucurbita maxima (Rimu)	cmawmB520
Cla013994	Cucurbita maxima (Rimu)	cmawmB570
Cla013994	Cucurbita maxima (Rimu)	cmawmB632
Cla013994	Cucurbita maxima (Rimu)	cmawmB763
Cla013994	Cucurbita maxima (Rimu)	cmawmB826
Cla013994	Cucurbita moschata (Rifu)	cmowmB152
Cla013994	Cucurbita moschata (Rifu)	cmowmB510
Cla013994	Cucurbita moschata (Rifu)	cmowmB565
Cla013994	Cucurbita moschata (Rifu)	cmowmB623
Cla013994	Cucurbita moschata (Rifu)	cmowmB756
Cla013994	Cucurbita moschata (Rifu)	cmowmB816
Cla013994	Melon (DHL92) v3.5.1	mewmB322
Cla013994	Melon (DHL92) v3.5.1	mewmB570
Cla013994	Watermelon (Charleston Gray)	wcgwmB141
Cla013994	Watermelon (Charleston Gray)	wcgwmB418
Cla013994	Cucumber (Chinese Long) v2	cuwmB137
Cla013994	Cucumber (Chinese Long) v2	cuwmB500
Cla013994	Cucurbita pepo (Zucchini)	cpewmB073
Cla013994	Cucurbita pepo (Zucchini)	cpewmB112
Cla013994	Cucurbita pepo (Zucchini)	cpewmB285
Cla013994	Cucurbita pepo (Zucchini)	cpewmB482
Cla013994	Cucurbita pepo (Zucchini)	cpewmB720
Cla013994	Bottle gourd (USVL1VR-Ls)	lsiwmB144
Cla013994	Bottle gourd (USVL1VR-Ls)	lsiwmB488
Cla013994	Cucumber (Gy14) v2	cgybwmB131
Cla013994	Cucumber (Gy14) v2	cgybwmB468
Cla013994	Melon (DHL92) v3.6.1	medwmB319
Cla013994	Melon (DHL92) v3.6.1	medwmB559