Cla013983 (gene) Watermelon (97103) v1

NameCla013983
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 27092303 .. 27092614 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAACACAGAAACGCCGAATCTAAATTCTCCGGCGATGCCCAACCTCAGAACTTCCTCTTTATTTCTAATCATCCTGCTAATCGCCGCCCCACGGTTCTTTCTTCTCGTAGATTGCAGACCGCTCCGGCCCGGTTCAACGATAGAGCCGCACCGTGTTCATAATAATGTCTCTGCTCTTGCCAGCCAGAACCCGGAAACAGCAGTTTCGCCGCCCATATATTCCGGTAGCCGCCGTATCGGAGACGACAACGGCGGCGTAGCTTTTACTTTTGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAA

mRNA sequence

ATGCCGAACACAGAAACGCCGAATCTAAATTCTCCGGCGATGCCCAACCTCAGAACTTCCTCTTTATTTCTAATCATCCTGCTAATCGCCGCCCCACGGTTCTTTCTTCTCGTAGATTGCAGACCGCTCCGGCCCGGTTCAACGATAGAGCCGCACCGTGTTCATAATAATGTCTCTGCTCTTGCCAGCCAGAACCCGGAAACAGCAGTTTCGCCGCCCATATATTCCGGTAGCCGCCGTATCGGAGACGACAACGGCGGCGTAGCTTTTACTTTTGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAA

Coding sequence (CDS)

ATGCCGAACACAGAAACGCCGAATCTAAATTCTCCGGCGATGCCCAACCTCAGAACTTCCTCTTTATTTCTAATCATCCTGCTAATCGCCGCCCCACGGTTCTTTCTTCTCGTAGATTGCAGACCGCTCCGGCCCGGTTCAACGATAGAGCCGCACCGTGTTCATAATAATGTCTCTGCTCTTGCCAGCCAGAACCCGGAAACAGCAGTTTCGCCGCCCATATATTCCGGTAGCCGCCGTATCGGAGACGACAACGGCGGCGTAGCTTTTACTTTTGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAA

Protein sequence

MPNTETPNLNSPAMPNLRTSSLFLIILLIAAPRFFLLVDCRPLRPGSTIEPHRVHNNVSALASQNPETAVSPPIYSGSRRIGDDNGGVAFTFASGPSRKGAGH
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU38821watermelon EST collection version 2.0transcribed_cluster
WMU62453watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013983Cla013983.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU38821WMU38821transcribed_cluster
WMU62453WMU62453transcribed_cluster


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla013983Cucurbita moschata (Rifu)cmowmB152
Cla013983Cucurbita moschata (Rifu)cmowmB510
Cla013983Cucurbita moschata (Rifu)cmowmB565
Cla013983Cucurbita moschata (Rifu)cmowmB623
Cla013983Cucurbita moschata (Rifu)cmowmB756
Cla013983Melon (DHL92) v3.5.1mewmB237
Cla013983Melon (DHL92) v3.5.1mewmB322
Cla013983Melon (DHL92) v3.5.1mewmB533
Cla013983Watermelon (Charleston Gray)wcgwmB418
Cla013983Cucumber (Chinese Long) v2cuwmB137
Cla013983Cucumber (Chinese Long) v2cuwmB327
Cla013983Cucumber (Chinese Long) v2cuwmB500
Cla013983Cucumber (Chinese Long) v2cuwmB594
Cla013983Cucurbita pepo (Zucchini)cpewmB073
Cla013983Cucurbita pepo (Zucchini)cpewmB112
Cla013983Cucurbita pepo (Zucchini)cpewmB285
Cla013983Cucurbita pepo (Zucchini)cpewmB482
Cla013983Cucurbita pepo (Zucchini)cpewmB720
Cla013983Bottle gourd (USVL1VR-Ls)lsiwmB488
Cla013983Cucumber (Gy14) v2cgybwmB131
Cla013983Cucumber (Gy14) v2cgybwmB468
Cla013983Melon (DHL92) v3.6.1medwmB319
Cla013983Silver-seed gourdcarwmB0176
Cla013983Silver-seed gourdcarwmB0407
Cla013983Silver-seed gourdcarwmB0805
Cla013983Cucumber (Chinese Long) v3cucwmB150
Cla013983Cucumber (Chinese Long) v3cucwmB625
Cla013983Watermelon (97103) v2wmwmbB280
Cla013983Wax gourdwgowmB339
Cla013983Watermelon (97103) v1wmwmB066
Cla013983Watermelon (97103) v1wmwmB121
Cla013983Cucumber (Gy14) v1cgywmB136
Cla013983Cucumber (Gy14) v1cgywmB425
Cla013983Cucumber (Gy14) v1cgywmB711
Cla013983Cucurbita maxima (Rimu)cmawmB497
Cla013983Cucurbita maxima (Rimu)cmawmB520
Cla013983Cucurbita maxima (Rimu)cmawmB570
Cla013983Cucurbita maxima (Rimu)cmawmB632
Cla013983Cucurbita maxima (Rimu)cmawmB763
Cla013983Cucurbita maxima (Rimu)cmawmB826