Cla013679 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013679
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Glutaredoxin family protein (AHRD V1 *--- Q9M031_ARATH); contains Interpro domain(s) IPR012336 Thioredoxin-like fold
Location	Chr8 : 17701796 .. 17702821 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGGGTCAAAGGAAAATTCATGAAGAAGCTTAAATCGATCAAGCCCGCCATAGCCTATCTAAACCAAGATCGAATTCTTCAGGCCATTGCTCCAGATGGGTACTACGATTTCTTCACCAGAAACGAAAATTTCAAACCCAATGTTCAGATTCAGAAGAAGATCGAGAAGATCGATTCGAATTCGGTGAAGAAAGACAGAGATTGTGTTGAAGATGAAGAAACAGAGGAGTCTGGTTTCGATGTCGATGATAAAGAGAACATCCAGCCGTTTGTTGAATGCAAAAGTAAGGATTCTTTGTGTTTAAGAAGTGGAAATTGTTTTTCGGAATCGAAAAGAGAAACCCCATTGTCGGAAATTGACATCTCGTCTTTCCGGCCACCGGATATGAACTCCGGCAGCCTCTTTGACCCTAATTTACTTGAGGTTTTTCAACAAGCTGTGATGGAACATATGAAAATAAGGGAAGCAAAGATCAAATGTAGAATCAAATATGGAGAGGAAGAAGAAGAAGAAGAAGAAGAAAAACAGAGTCCTTTGTTTTTATTTGAAGAAAAATGCCCACCAGGAGGATCAGACTCGGTAATTCTTTACACAACAACACTAAGAGGAATAAGGAAAACATTTGAGGATTGCAACAGCATCAGATTTCTATTAGAAACATTCAAAGTGAAATTCTACGAGCGAGACGTTTCGATGCATACCGAGTTCAAGGAAGAGCTATGGAGAGTTTTGGAAACAAACAGAGCTTTACCTCCAAAGCTGTTCATAAGAGGAAGGTACATTGGTGGAGCAGAGGAAGTTTTGGGGCTACACGAACAGGGGAAGCTCCGACCGCTGTTCGACGGTATTCCGATGGACAGTTTCTCCGGGATTCCGTGCGAGGGGTGCGGCGGAGTTCGATTCGTGCTATGCTTCAACTGCAATGGGAGTCAAAGAGTAGTTGTTGATGAGAGTGATGAACGGAGGAAATGCTCAGAATGTAATGAAAATGGATTGATACTCTGTCCTTATTGCTGCTAA

mRNA sequence

ATGAATGGGGTCAAAGGAAAATTCATGAAGAAGCTTAAATCGATCAAGCCCGCCATAGCCTATCTAAACCAAGATCGAATTCTTCAGGCCATTGCTCCAGATGGGTACTACGATTTCTTCACCAGAAACGAAAATTTCAAACCCAATGTTCAGATTCAGAAGAAGATCGAGAAGATCGATTCGAATTCGGTGAAGAAAGACAGAGATTGTGTTGAAGATGAAGAAACAGAGGAGTCTGGTTTCGATGTCGATGATAAAGAGAACATCCAGCCGTTTGTTGAATGCAAAAGTAAGGATTCTTTGTGTTTAAGAAGTGGAAATTGTTTTTCGGAATCGAAAAGAGAAACCCCATTGTCGGAAATTGACATCTCGTCTTTCCGGCCACCGGATATGAACTCCGGCAGCCTCTTTGACCCTAATTTACTTGAGGTTTTTCAACAAGCTGTGATGGAACATATGAAAATAAGGGAAGCAAAGATCAAATGTAGAATCAAATATGGAGAGGAAGAAGAAGAAGAAGAAGAAGAAAAACAGAGTCCTTTGTTTTTATTTGAAGAAAAATGCCCACCAGGAGGATCAGACTCGGTAATTCTTTACACAACAACACTAAGAGGAATAAGGAAAACATTTGAGGATTGCAACAGCATCAGATTTCTATTAGAAACATTCAAAGTGAAATTCTACGAGCGAGACGTTTCGATGCATACCGAGTTCAAGGAAGAGCTATGGAGAGTTTTGGAAACAAACAGAGCTTTACCTCCAAAGCTGTTCATAAGAGGAAGGTACATTGGTGGAGCAGAGGAAGTTTTGGGGCTACACGAACAGGGGAAGCTCCGACCGCTGTTCGACGGTATTCCGATGGACAGTTTCTCCGGGATTCCGTGCGAGGGGTGCGGCGGAGTTCGATTCGTGCTATGCTTCAACTGCAATGGGAGTCAAAGAGTAGTTGTTGATGAGAGTGATGAACGGAGGAAATGCTCAGAATGTAATGAAAATGGATTGATACTCTGTCCTTATTGCTGCTAA

Coding sequence (CDS)

ATGAATGGGGTCAAAGGAAAATTCATGAAGAAGCTTAAATCGATCAAGCCCGCCATAGCCTATCTAAACCAAGATCGAATTCTTCAGGCCATTGCTCCAGATGGGTACTACGATTTCTTCACCAGAAACGAAAATTTCAAACCCAATGTTCAGATTCAGAAGAAGATCGAGAAGATCGATTCGAATTCGGTGAAGAAAGACAGAGATTGTGTTGAAGATGAAGAAACAGAGGAGTCTGGTTTCGATGTCGATGATAAAGAGAACATCCAGCCGTTTGTTGAATGCAAAAGTAAGGATTCTTTGTGTTTAAGAAGTGGAAATTGTTTTTCGGAATCGAAAAGAGAAACCCCATTGTCGGAAATTGACATCTCGTCTTTCCGGCCACCGGATATGAACTCCGGCAGCCTCTTTGACCCTAATTTACTTGAGGTTTTTCAACAAGCTGTGATGGAACATATGAAAATAAGGGAAGCAAAGATCAAATGTAGAATCAAATATGGAGAGGAAGAAGAAGAAGAAGAAGAAGAAAAACAGAGTCCTTTGTTTTTATTTGAAGAAAAATGCCCACCAGGAGGATCAGACTCGGTAATTCTTTACACAACAACACTAAGAGGAATAAGGAAAACATTTGAGGATTGCAACAGCATCAGATTTCTATTAGAAACATTCAAAGTGAAATTCTACGAGCGAGACGTTTCGATGCATACCGAGTTCAAGGAAGAGCTATGGAGAGTTTTGGAAACAAACAGAGCTTTACCTCCAAAGCTGTTCATAAGAGGAAGGTACATTGGTGGAGCAGAGGAAGTTTTGGGGCTACACGAACAGGGGAAGCTCCGACCGCTGTTCGACGGTATTCCGATGGACAGTTTCTCCGGGATTCCGTGCGAGGGGTGCGGCGGAGTTCGATTCGTGCTATGCTTCAACTGCAATGGGAGTCAAAGAGTAGTTGTTGATGAGAGTGATGAACGGAGGAAATGCTCAGAATGTAATGAAAATGGATTGATACTCTGTCCTTATTGCTGCTAA

Protein sequence

MNGVKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYDFFTRNENFKPNVQIQKKIEKIDSNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKSKDSLCLRSGNCFSESKRETPLSEIDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIREAKIKCRIKYGEEEEEEEEEKQSPLFLFEEKCPPGGSDSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPKLFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNGSQRVVVDESDERRKCSECNENGLILCPYCC

Homology

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BLAST of Cla013679 vs. Swiss-Prot
Match: Y3885_ARATH (Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.5e-34
Identity = 88/241 (36.51%), Postives = 130/241 (53.94%), Query Frame = 1


Query: 137 FDPNLLEVFQQAVME-------HMKIREAKIKCRIKYGEEEEEEEEEKQSPLFLFEEKCP 196
           FDP ++  F++++ E       H+   + ++K R  + +EE+EEEE+             
Sbjct: 200 FDPEIISSFRKSLQELPSDHPFHISNHDFELKPRFNFSDEEKEEEEQSV----------- 259

Query: 197 PGGSDSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVL--E 256
             G + VILY T+LRGIRKT+E+   +R +L++  ++  ERDVSMH+ FK+EL  +L  +
Sbjct: 260 --GKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEK 319

Query: 257 TNRALP---PKLFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPM----DSFSGIPCEGCGG 316
            N+ +    P++F+  +YIGGAEE+  L+E GKL  L  G        + +G+ CE CG 
Sbjct: 320 FNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGD 379

Query: 317 VRFVLCFNCNGSQRVVV---------DESDER-----------RKCSECNENGLILCPYC 342
           VRFV C  C+GS +V           DE D+            + C +CNENGLI CP C
Sbjct: 380 VRFVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQTCPDCNENGLIRCPVC 427

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BLAST of Cla013679 vs. Swiss-Prot
Match: Y5986_ARATH (Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 73/167 (43.71%), Postives = 100/167 (59.88%), Query Frame = 1


Query: 192 GSDSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLE--TN 251
           G + V+LY T+LRGIRKT+EDC +IR +L++  ++  ERDVSMH+ FK+EL ++LE   N
Sbjct: 223 GKERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFN 282

Query: 252 RALP---PKLFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPM--DSFSGI--PCEGCGGVR 311
             +    P++F+  +Y+GG EE+  L+E G+L  L     M  D   G    CE CG VR
Sbjct: 283 NGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVR 342

Query: 312 FVLCFNCNGSQRVV--VDESDER------RKCSECNENGLILCPYCC 342
           FV C  C+GS ++    +E DE       ++C  CNENGLI C  CC
Sbjct: 343 FVPCETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRCHVCC 389

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BLAST of Cla013679 vs. Swiss-Prot
Match: GRCR1_HUMAN (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20
Identity = 56/153 (36.60%), Postives = 84/153 (54.90%), Query Frame = 1


Query: 194 DSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALP 253
           D V++YTT LR +R TFE C  +R + +  +VKF E++++++ E+ +EL          P
Sbjct: 137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVSEAP 196

Query: 254 --PKLFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNG 313
             P +FI G Y+GGAE++L ++E G+L+ +   I         C  CGG  F+ C  C+G
Sbjct: 197 SLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPH-ECPSCGGFGFLPCSVCHG 256

Query: 314 SQ----RVVVDESDERRKCSECNENGLILCPYC 341
           S+    R    +S +  KC+ CNENGL  C  C
Sbjct: 257 SKMSMFRNCFTDSFKALKCTACNENGLQRCKNC 288

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BLAST of Cla013679 vs. Swiss-Prot
Match: GRCR1_DROME (Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melanogaster GN=CG31559 PE=2 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 1


Query: 196 VILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPK 255
           V+LYTT++  IR+T+  C +++ +L T  VKF ERDV M  E++ E+ + +++ +   P+
Sbjct: 307 VVLYTTSMGIIRETYTKCANVKQILRTLLVKFEERDVFMSVEYQAEMRQRMQSGQVRVPQ 366

Query: 256 LFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPMDSF-SGIPCEGCGGVRFVLCFNCNGSQR 315
           L++ G++IG AE V  ++E G+LR L    P  S  S   C+ CGG R + C +CNGS++
Sbjct: 367 LYVEGQHIGDAETVERMNESGELRQLLK--PYKSMASTYTCQTCGGYRLLPCPSCNGSKK 426

Query: 316 VV----VDESDERRKCSECNENGLILCPYC 341
            V            KC  C+E GL+ C  C
Sbjct: 427 SVHRNHFTAEFVALKCMNCDEVGLVKCHNC 454

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BLAST of Cla013679 vs. Swiss-Prot
Match: GRCR1_MOUSE (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.7e-20
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 1


Query: 194 DSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALP 253
           D V++YTT LR +R TFE C  +R + +  +VKF E++++++ ++ +EL          P
Sbjct: 137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGDYGKELDERCRRVSEAP 196

Query: 254 --PKLFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNG 313
             P +FI G Y+GGAE++L ++E G+L+ L   I         C  CGG  F+ C  C+G
Sbjct: 197 SLPVVFIDGHYLGGAEKILSMNESGELQDLLTKIERVQHPH-ECPSCGGFGFLPCSVCHG 256

Query: 314 SQ----RVVVDESDERRKCSECNENGLILCPYC 341
           S+    R    ++ +  KC+ CNENGL  C  C
Sbjct: 257 SKMSVFRNCFTDAFKALKCTACNENGLQRCKNC 288

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BLAST of Cla013679 vs. TrEMBL
Match: A0A0A0KE80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046340 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 5.9e-166
Identity = 289/341 (84.75%), Postives = 314/341 (92.08%), Query Frame = 1


Query: 1   MNGVKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYDFFTRNENFKPNVQIQKKIEKID 60
           MNGV GKFMKKLKSIKPAIAYLNQDRILQAIAPDGY DFFTRNENFKPN+ IQK I+KI 
Sbjct: 1   MNGVGGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYCDFFTRNENFKPNIPIQKTIKKIA 60

Query: 61  SNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKSKDSLCLRSGNCFSESKRETPLSE 120
           SN  KK+ D  ED ETEE+GFD  +KENI+PFVE ++KDSLC  SGNC + SKRETPLSE
Sbjct: 61  SNLGKKNGDGFEDGETEETGFD--EKENIEPFVEYRNKDSLCSSSGNCLAGSKRETPLSE 120

Query: 121 IDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIREAKIKCRIKYGEEEEEEEEEKQSP 180
           IDISSFRPPDMNSGSLFDPNLLEVFQQAVME+MKIRE +I+C IK+  EEEEEEEEK++P
Sbjct: 121 IDISSFRPPDMNSGSLFDPNLLEVFQQAVMEYMKIREEEIECSIKF--EEEEEEEEKRNP 180

Query: 181 LFLFEEKCPPGGSDSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKE 240
           LF FEEKCPPGGSDSVILY+TTLRGIRKTFEDCNSIRFLLETFKVKF+ERDVSMHTEFKE
Sbjct: 181 LFCFEEKCPPGGSDSVILYSTTLRGIRKTFEDCNSIRFLLETFKVKFHERDVSMHTEFKE 240

Query: 241 ELWRVLETNRALPPKLFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGG 300
           ELWRVLETNRALPPKLFIRG+YIGGAEEVLGLHEQGKLR LF+GIP+D FSGIPCEGCGG
Sbjct: 241 ELWRVLETNRALPPKLFIRGKYIGGAEEVLGLHEQGKLRALFEGIPIDQFSGIPCEGCGG 300

Query: 301 VRFVLCFNCNGSQRVVVDESDERRKCSECNENGLILCPYCC 342
           VRFVLC+ CNGS++VV DESDE+RKCSECNENGLI+CPYCC
Sbjct: 301 VRFVLCYKCNGSRKVVDDESDEQRKCSECNENGLIICPYCC 337

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BLAST of Cla013679 vs. TrEMBL
Match: A0A0D2V8U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G003000 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 7.8e-102
Identity = 206/363 (56.75%), Postives = 256/363 (70.52%), Query Frame = 1


Query: 1   MNGVKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYDFFTRNEN-------FKPNVQIQ 60
           M  VKGKF+KKLKSIKP + YL  DR+LQ +A DG+ D +T+  N       F    + Q
Sbjct: 1   MKSVKGKFLKKLKSIKP-VGYLKPDRVLQVLAIDGFIDSYTKTPNPNEQPKLFTKEFEEQ 60

Query: 61  KKIEK-----IDSNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKSKDSLCLRSGNC 120
           + I++     ID   + KD +  EDE+ EE     DDKENI+P +E ++ D  C R  NC
Sbjct: 61  EMIKENQPEIIDVEELMKDLESDEDEDGEEED---DDKENIRPNIETENVD--CSRQ-NC 120

Query: 121 FSESKRETPLSEIDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIRE----AKIKCRI 180
              S    PLSEID+SSFR PD+NS +LFDP LL  F+QAV EHMK+ E     + K RI
Sbjct: 121 ---SPTAVPLSEIDVSSFRRPDLNSCTLFDPKLLAAFEQAVKEHMKMNEEIHHVEKKPRI 180

Query: 181 KYGEEEEEEEEEKQS------PLFLFEEKCPPGGSDSVILYTTTLRGIRKTFEDCNSIRF 240
           +  EEEEEEEEE++       PL  FEEKCP GG  SVILYTTTL+GIRKTFEDCNS+RF
Sbjct: 181 EEKEEEEEEEEEEEEEEEESDPLLAFEEKCPAGGDGSVILYTTTLKGIRKTFEDCNSVRF 240

Query: 241 LLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPKLFIRGRYIGGAEEVLGLHEQGKL 300
           LLE+FKV FYERD+SMH E+KEELWR+L   + +PPKLFI+GRYIGGA+EVL LHEQGKL
Sbjct: 241 LLESFKVIFYERDISMHCEYKEELWRIL-GGKVMPPKLFIKGRYIGGADEVLTLHEQGKL 300

Query: 301 RPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNGSQRVVVDESDERRKCSECNENGLILCP 342
           + LF+GIP+D+ +G  C+GCGGVRFVLCF CNGS +++ D+     +C +CNENGLI+CP
Sbjct: 301 KVLFNGIPLDNCNG-ACDGCGGVRFVLCFVCNGSHKIIGDDG-MSSECMKCNENGLIVCP 350

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BLAST of Cla013679 vs. TrEMBL
Match: A0A067JT39_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22035 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.1e-99
Identity = 201/373 (53.89%), Postives = 258/373 (69.17%), Query Frame = 1


Query: 1   MNGVKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYD-FFTRNE------NFKPNVQIQ 60
           M G+KGK +KKLKSIKP      +DR+L   A DG+ +  F +N       +F P    Q
Sbjct: 1   MKGMKGKLLKKLKSIKP------KDRVLLVNAADGFIETIFPKNTKAQTHTHFIPKEAEQ 60

Query: 61  KKI------EKIDSNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKSKDSLCLRSGN 120
           +K+      + ID   + +D +  E+EE E    D  DKEN+ P  + + KD++ L++ N
Sbjct: 61  EKVVVDQGPDVIDVAELMRDLEGEEEEEEEMDIDDSGDKENVGPSFK-QQKDTVGLKNHN 120

Query: 121 --CFSESKRETPLSEIDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIREAKIKCRIK 180
             C S  +++TPLSEIDI S+R PD+NSG+LFDPNLL  F++AV EH +I EA+ + RI+
Sbjct: 121 MECNSFRQQQTPLSEIDILSYRRPDLNSGTLFDPNLLAAFEEAVKEHARISEAERRARIE 180

Query: 181 YGE----EEEEEEEEK-------------QSPLFLFEEKCPPGGSDSVILYTTTLRGIRK 240
                  +EE E  EK             ++PL  FEEKCPPGG+DSVILYTTTL+GIRK
Sbjct: 181 KENLERIKEEAENLEKCEEEPPLKARRIEENPLSGFEEKCPPGGNDSVILYTTTLKGIRK 240

Query: 241 TFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPKLFIRGRYIGGAEE 300
           TFEDCNS+RFLLE+F+V FYERDVSMH EFKEELW V+E  +A+PP+LFI+GRYIGGAEE
Sbjct: 241 TFEDCNSVRFLLESFRVIFYERDVSMHMEFKEELWNVME-GKAMPPRLFIKGRYIGGAEE 300

Query: 301 VLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNGSQRVVVDESDERRKCSE 342
           V+GLHEQGKL+ LF+G+P+D   G PCEGC G RFVLCFNCNGS RV+ ++    RKC +
Sbjct: 301 VIGLHEQGKLKLLFEGVPIDQSVG-PCEGCAGFRFVLCFNCNGSHRVIEEDDGLSRKCQD 360

[Close]

BLAST of Cla013679 vs. TrEMBL
Match: M5X4M6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020739mg PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.6e-97
Identity = 208/385 (54.03%), Postives = 260/385 (67.53%), Query Frame = 1


Query: 1   MNGVKGKFMKKLKSIKPAIAYLN-QDRILQAIAPDGYYDFF----------------TRN 60
           M GVKGKF+KKLKSI+P + YL  QDRILQ  A DGY D +                T  
Sbjct: 1   MKGVKGKFLKKLKSIRP-VGYLKPQDRILQVSASDGYADSYPKISDLNVQAQLVSMETEQ 60

Query: 61  ENFKPNVQIQKKIEKIDSNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKS----KD 120
           +  K NV  +++ + ID + + KD   +EDEE+     D+DDKENI+P ++ K+    K+
Sbjct: 61  KKMKENVLTEQEPDVIDVDELMKD---LEDEESGSED-DLDDKENIRPKMKAKNSMAFKE 120

Query: 121 SLCLRSGNCFSESK---------------RETPLSEIDISSFRPPDMNSGSLFDPNLLEV 180
           +L +R+ +   E++               R+ PLSEIDISSFR PD+NSGSLFDPNLL  
Sbjct: 121 NL-MRTEHNLGENRALEASEESLPGPDRGRQIPLSEIDISSFRRPDLNSGSLFDPNLLAA 180

Query: 181 FQQAVMEHMKIREAKIKCRIKYGE-------EEEEEEEEKQSPLFLFEEKCPPGGSDS-V 240
           FQQAVME+MK+ EA+   R    +       E E E    + PL  FEEKC PG SDS V
Sbjct: 181 FQQAVMEYMKLSEAERISRRSEKQNLDSNVVEPEPEPPSNEEPLLCFEEKCVPGSSDSSV 240

Query: 241 ILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPKL 300
           ILY+TTLRGIRKTF+DCNS+RFLLE+F+V FYERDVSMH EF+EELW+VL+  +A+PPKL
Sbjct: 241 ILYSTTLRGIRKTFDDCNSVRFLLESFRVVFYERDVSMHMEFREELWQVLDC-KAVPPKL 300

Query: 301 FIRGRYIGGAEEVLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNGSQRVV 342
           FI+GRYIGGAEEVL LHEQGKL+PLF G+P+D   G PCE C GVRFV+CF C+GS +V+
Sbjct: 301 FIKGRYIGGAEEVLTLHEQGKLKPLFHGVPIDRSIG-PCEACDGVRFVVCFKCSGSCKVI 360

[Close]

BLAST of Cla013679 vs. TrEMBL
Match: B9HVI8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24990g PE=4 SV=2)

HSP 1 Score: 363.2 bits (931), Expect = 3.4e-97
Identity = 200/378 (52.91%), Postives = 251/378 (66.40%), Query Frame = 1


Query: 4   VKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYDFFTRNENFK-------PNVQIQKKI 63
           +KGK MKKLKSIKP I YL + R+LQ  A DG+ + F +    K       P V + K++
Sbjct: 5   MKGKLMKKLKSIKP-IGYLKETRVLQVNAADGFIETFIKKPILKAQAQAETPEVMVCKEV 64

Query: 64  E--KIDSNS--VKKDRDCVE------DEETEESGFDVDD-KENIQPFVECKSKDSLCLRS 123
           E  K+  +S  V ++ D ++      D E EE   +VDD KEN++P V+ +         
Sbjct: 65  EQEKVKDSSFVVNQESDVIDVNELMRDLEEEEEEMEVDDDKENVRPVVKARVDLFGVKDK 124

Query: 124 GNCFSESKRETPLSEIDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIREAKIKCRIK 183
                 + R++PLSEIDISSFR PD+NSGSLFDPNLL  F++AV EHM++ E + + RI+
Sbjct: 125 EESKGSNFRQSPLSEIDISSFRRPDLNSGSLFDPNLLSAFEEAVKEHMRVSEEERRARIE 184

Query: 184 --------------YGEEEEE--------EEEEKQSPLFLFEEKCPPGGSDSVILYTTTL 243
                         +  +EEE        EE +   P+  F+E CPPGGSDSVILYTT+L
Sbjct: 185 KENLERMREEPEKNFENQEEEPPLKARRIEEGDDIDPILGFQEMCPPGGSDSVILYTTSL 244

Query: 244 RGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPKLFIRGRYI 303
           RGIRKTFEDCNSIRFLLE+F+V F+ERDVSMH EFKEELWRVL+  R  PP+LFI+GRYI
Sbjct: 245 RGIRKTFEDCNSIRFLLESFRVLFFERDVSMHMEFKEELWRVLD-GRVNPPRLFIKGRYI 304

Query: 304 GGAEEVLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNGSQRVVVDESDER 342
           GGAEEVL LHEQG+ R LF+GIP+D F G PCEGC G RFVLCF+CNGS +VV  E+   
Sbjct: 305 GGAEEVLALHEQGRFRVLFEGIPIDIFIGSPCEGCAGFRFVLCFHCNGSHKVVA-ENGLS 364

[Close]

BLAST of Cla013679 vs. NCBI nr
Match: gi|778710455|ref|XP_004140915.2| (PREDICTED: uncharacterized protein At3g28850 [Cucumis sativus])

HSP 1 Score: 591.7 bits (1524), Expect = 8.4e-166
Identity = 289/341 (84.75%), Postives = 314/341 (92.08%), Query Frame = 1


Query: 1   MNGVKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYDFFTRNENFKPNVQIQKKIEKID 60
           MNGV GKFMKKLKSIKPAIAYLNQDRILQAIAPDGY DFFTRNENFKPN+ IQK I+KI 
Sbjct: 1   MNGVGGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYCDFFTRNENFKPNIPIQKTIKKIA 60

Query: 61  SNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKSKDSLCLRSGNCFSESKRETPLSE 120
           SN  KK+ D  ED ETEE+GFD  +KENI+PFVE ++KDSLC  SGNC + SKRETPLSE
Sbjct: 61  SNLGKKNGDGFEDGETEETGFD--EKENIEPFVEYRNKDSLCSSSGNCLAGSKRETPLSE 120

Query: 121 IDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIREAKIKCRIKYGEEEEEEEEEKQSP 180
           IDISSFRPPDMNSGSLFDPNLLEVFQQAVME+MKIRE +I+C IK+  EEEEEEEEK++P
Sbjct: 121 IDISSFRPPDMNSGSLFDPNLLEVFQQAVMEYMKIREEEIECSIKF--EEEEEEEEKRNP 180

Query: 181 LFLFEEKCPPGGSDSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKE 240
           LF FEEKCPPGGSDSVILY+TTLRGIRKTFEDCNSIRFLLETFKVKF+ERDVSMHTEFKE
Sbjct: 181 LFCFEEKCPPGGSDSVILYSTTLRGIRKTFEDCNSIRFLLETFKVKFHERDVSMHTEFKE 240

Query: 241 ELWRVLETNRALPPKLFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGG 300
           ELWRVLETNRALPPKLFIRG+YIGGAEEVLGLHEQGKLR LF+GIP+D FSGIPCEGCGG
Sbjct: 241 ELWRVLETNRALPPKLFIRGKYIGGAEEVLGLHEQGKLRALFEGIPIDQFSGIPCEGCGG 300

Query: 301 VRFVLCFNCNGSQRVVVDESDERRKCSECNENGLILCPYCC 342
           VRFVLC+ CNGS++VV DESDE+RKCSECNENGLI+CPYCC
Sbjct: 301 VRFVLCYKCNGSRKVVDDESDEQRKCSECNENGLIICPYCC 337

[Close]

BLAST of Cla013679 vs. NCBI nr
Match: gi|659113529|ref|XP_008456623.1| (PREDICTED: uncharacterized protein At3g28850 [Cucumis melo])

HSP 1 Score: 580.9 bits (1496), Expect = 1.5e-162
Identity = 287/352 (81.53%), Postives = 314/352 (89.20%), Query Frame = 1


Query: 1   MNGVKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYDFFTRNENFKPNVQIQKKIEKID 60
           MNGV GKFMKKLKSIKPAIAYLNQDRILQAIAPDGY DFFTRNENFKPN+ IQK I+KI 
Sbjct: 1   MNGVGGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYCDFFTRNENFKPNIPIQKTIQKIA 60

Query: 61  SNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKSKDSLCLRSGNCFSESKRETPLSE 120
           SN  KK+ D VED ETEESGFD  +KENI+PFVE ++KDSLC  SGN   +SKRETPLSE
Sbjct: 61  SNLGKKNGDGVEDGETEESGFD--EKENIEPFVEYRNKDSLCSSSGNFLVDSKRETPLSE 120

Query: 121 IDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIREAKIKCRIKYGEEE---------- 180
           IDISSFRPPDMNSGSLFDPNLLEVFQQAVME+MK RE +I+CRI++ EEE          
Sbjct: 121 IDISSFRPPDMNSGSLFDPNLLEVFQQAVMEYMKFREDEIECRIEFEEEEKRSPLFCFEE 180

Query: 181 --EEEEEEKQSPLFLFEEKCPPGGSDSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFY 240
             EEEEEEK+SPLF FEEKCPPGGSDSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKF+
Sbjct: 181 EEEEEEEEKRSPLFCFEEKCPPGGSDSVILYTTTLRGIRKTFEDCNSIRFLLETFKVKFH 240

Query: 241 ERDVSMHTEFKEELWRVLETNRALPPKLFIRGRYIGGAEEVLGLHEQGKLRPLFDGIPMD 300
           ERDVSMHTEFKE+LW+VLETNRALPPKLFIRG+YIGGAEEVL LHE+GKLRPLF+GIP+D
Sbjct: 241 ERDVSMHTEFKEDLWKVLETNRALPPKLFIRGKYIGGAEEVLELHEKGKLRPLFEGIPID 300

Query: 301 SFSGIPCEGCGGVRFVLCFNCNGSQRVVVDESDERRKCSECNENGLILCPYC 341
            FSGIPCEGCGGVRFVLCF C+GS++VV DESDE+RKC+ECNENGLI+CPYC
Sbjct: 301 QFSGIPCEGCGGVRFVLCFKCHGSRKVVDDESDEQRKCTECNENGLIICPYC 350

[Close]

BLAST of Cla013679 vs. NCBI nr
Match: gi|823259050|ref|XP_012462225.1| (PREDICTED: uncharacterized protein At3g28850 [Gossypium raimondii])

HSP 1 Score: 378.6 bits (971), Expect = 1.1e-101
Identity = 206/363 (56.75%), Postives = 256/363 (70.52%), Query Frame = 1


Query: 1   MNGVKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYDFFTRNEN-------FKPNVQIQ 60
           M  VKGKF+KKLKSIKP + YL  DR+LQ +A DG+ D +T+  N       F    + Q
Sbjct: 1   MKSVKGKFLKKLKSIKP-VGYLKPDRVLQVLAIDGFIDSYTKTPNPNEQPKLFTKEFEEQ 60

Query: 61  KKIEK-----IDSNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKSKDSLCLRSGNC 120
           + I++     ID   + KD +  EDE+ EE     DDKENI+P +E ++ D  C R  NC
Sbjct: 61  EMIKENQPEIIDVEELMKDLESDEDEDGEEED---DDKENIRPNIETENVD--CSRQ-NC 120

Query: 121 FSESKRETPLSEIDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIRE----AKIKCRI 180
              S    PLSEID+SSFR PD+NS +LFDP LL  F+QAV EHMK+ E     + K RI
Sbjct: 121 ---SPTAVPLSEIDVSSFRRPDLNSCTLFDPKLLAAFEQAVKEHMKMNEEIHHVEKKPRI 180

Query: 181 KYGEEEEEEEEEKQS------PLFLFEEKCPPGGSDSVILYTTTLRGIRKTFEDCNSIRF 240
           +  EEEEEEEEE++       PL  FEEKCP GG  SVILYTTTL+GIRKTFEDCNS+RF
Sbjct: 181 EEKEEEEEEEEEEEEEEEESDPLLAFEEKCPAGGDGSVILYTTTLKGIRKTFEDCNSVRF 240

Query: 241 LLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPKLFIRGRYIGGAEEVLGLHEQGKL 300
           LLE+FKV FYERD+SMH E+KEELWR+L   + +PPKLFI+GRYIGGA+EVL LHEQGKL
Sbjct: 241 LLESFKVIFYERDISMHCEYKEELWRIL-GGKVMPPKLFIKGRYIGGADEVLTLHEQGKL 300

Query: 301 RPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNGSQRVVVDESDERRKCSECNENGLILCP 342
           + LF+GIP+D+ +G  C+GCGGVRFVLCF CNGS +++ D+     +C +CNENGLI+CP
Sbjct: 301 KVLFNGIPLDNCNG-ACDGCGGVRFVLCFVCNGSHKIIGDDG-MSSECMKCNENGLIVCP 350

[Close]

BLAST of Cla013679 vs. NCBI nr
Match: gi|802716097|ref|XP_012084880.1| (PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas])

HSP 1 Score: 370.5 bits (950), Expect = 3.1e-99
Identity = 201/373 (53.89%), Postives = 258/373 (69.17%), Query Frame = 1


Query: 1   MNGVKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYD-FFTRNE------NFKPNVQIQ 60
           M G+KGK +KKLKSIKP      +DR+L   A DG+ +  F +N       +F P    Q
Sbjct: 1   MKGMKGKLLKKLKSIKP------KDRVLLVNAADGFIETIFPKNTKAQTHTHFIPKEAEQ 60

Query: 61  KKI------EKIDSNSVKKDRDCVEDEETEESGFDVDDKENIQPFVECKSKDSLCLRSGN 120
           +K+      + ID   + +D +  E+EE E    D  DKEN+ P  + + KD++ L++ N
Sbjct: 61  EKVVVDQGPDVIDVAELMRDLEGEEEEEEEMDIDDSGDKENVGPSFK-QQKDTVGLKNHN 120

Query: 121 --CFSESKRETPLSEIDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIREAKIKCRIK 180
             C S  +++TPLSEIDI S+R PD+NSG+LFDPNLL  F++AV EH +I EA+ + RI+
Sbjct: 121 MECNSFRQQQTPLSEIDILSYRRPDLNSGTLFDPNLLAAFEEAVKEHARISEAERRARIE 180

Query: 181 YGE----EEEEEEEEK-------------QSPLFLFEEKCPPGGSDSVILYTTTLRGIRK 240
                  +EE E  EK             ++PL  FEEKCPPGG+DSVILYTTTL+GIRK
Sbjct: 181 KENLERIKEEAENLEKCEEEPPLKARRIEENPLSGFEEKCPPGGNDSVILYTTTLKGIRK 240

Query: 241 TFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPKLFIRGRYIGGAEE 300
           TFEDCNS+RFLLE+F+V FYERDVSMH EFKEELW V+E  +A+PP+LFI+GRYIGGAEE
Sbjct: 241 TFEDCNSVRFLLESFRVIFYERDVSMHMEFKEELWNVME-GKAMPPRLFIKGRYIGGAEE 300

Query: 301 VLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNGSQRVVVDESDERRKCSE 342
           V+GLHEQGKL+ LF+G+P+D   G PCEGC G RFVLCFNCNGS RV+ ++    RKC +
Sbjct: 301 VIGLHEQGKLKLLFEGVPIDQSVG-PCEGCAGFRFVLCFNCNGSHRVIEEDDGLSRKCQD 360

[Close]

BLAST of Cla013679 vs. NCBI nr
Match: gi|743831878|ref|XP_011024139.1| (PREDICTED: uncharacterized protein At3g28850-like [Populus euphratica])

HSP 1 Score: 364.8 bits (935), Expect = 1.7e-97
Identity = 202/377 (53.58%), Postives = 251/377 (66.58%), Query Frame = 1


Query: 4   VKGKFMKKLKSIKPAIAYLNQDRILQAIAPDGYYDFFTRNENFK-----PNVQIQKKIE- 63
           +KGK MKKLKSIKP I YL + R+LQ  A DG+ + F +    K     P V + K++E 
Sbjct: 5   MKGKLMKKLKSIKP-IGYLKETRVLQVNAADGFIETFIKKPILKAQAETPEVMVCKEVEQ 64

Query: 64  -KIDSNS--VKKDRDCVE--------DEETEESGFDVDDKENIQPFVECKSKDSLCLRSG 123
            K+  +S  V ++ D ++        DEE EE   D DDKEN++P V+ +          
Sbjct: 65  EKVKDSSFVVNQESDVIDVNELMRDLDEEDEEMEVD-DDKENVRPVVKARVDLFGVKDKE 124

Query: 124 NCFSESKRETPLSEIDISSFRPPDMNSGSLFDPNLLEVFQQAVMEHMKIREAKIKCRIK- 183
                + R++PLSEIDISSFR PD+NSGSLFDPNLL  F++AV EHM++ E + + RI+ 
Sbjct: 125 ESKGSNFRQSPLSEIDISSFRRPDLNSGSLFDPNLLSAFEEAVKEHMRVSEEERRARIEK 184

Query: 184 -------------YGEEEEE--------EEEEKQSPLFLFEEKCPPGGSDSVILYTTTLR 243
                        +  +EEE        EE +   P+  F E CPPGGSDSVILYTT+LR
Sbjct: 185 ENLERMREEPEKNFENQEEEPPLKARRIEEGDDIDPILGFPEMCPPGGSDSVILYTTSLR 244

Query: 244 GIRKTFEDCNSIRFLLETFKVKFYERDVSMHTEFKEELWRVLETNRALPPKLFIRGRYIG 303
           GIRKTFEDCNSIRFLLE+F+V F+ERDVSMH EFKEELWRVL+  R  PP+LFI+GRYIG
Sbjct: 245 GIRKTFEDCNSIRFLLESFRVLFFERDVSMHMEFKEELWRVLD-GRVNPPRLFIKGRYIG 304

Query: 304 GAEEVLGLHEQGKLRPLFDGIPMDSFSGIPCEGCGGVRFVLCFNCNGSQRVVVDESDERR 342
           GAEEVL LHEQG+ R LF+GIP+D F G PCEGC G RFVLCF+CNGS +VVV E+    
Sbjct: 305 GAEEVLALHEQGRFRVLFEGIPIDIFIGSPCEGCAGFRFVLCFHCNGSHKVVV-ENGLPS 364

The following BLAST results are available for this feature:

BLAST of Cla013679 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3885_ARATH	4.5e-34	36.51	Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=3 SV=1	[more]
Y5986_ARATH	1.3e-28	43.71	Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1	[more]
GRCR1_HUMAN	1.3e-20	36.60	Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1...	[more]
GRCR1_DROME	1.7e-20	37.33	Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melan...	[more]
GRCR1_MOUSE	3.7e-20	35.95	Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1...	[more]

BLAST of Cla013679 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE80_CUCSA	5.9e-166	84.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046340 PE=4 SV=1	[more]
A0A0D2V8U0_GOSRA	7.8e-102	56.75	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G003000 PE=4 SV=1	[more]
A0A067JT39_JATCU	2.1e-99	53.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22035 PE=4 SV=1	[more]
M5X4M6_PRUPE	2.6e-97	54.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020739mg PE=4 SV=1	[more]
B9HVI8_POPTR	3.4e-97	52.91	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24990g PE=4 SV=2	[more]

BLAST of Cla013679 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778710455\|ref\|XP_004140915.2\|	8.4e-166	84.75	PREDICTED: uncharacterized protein At3g28850 [Cucumis sativus]	[more]
gi\|659113529\|ref\|XP_008456623.1\|	1.5e-162	81.53	PREDICTED: uncharacterized protein At3g28850 [Cucumis melo]	[more]
gi\|823259050\|ref\|XP_012462225.1\|	1.1e-101	56.75	PREDICTED: uncharacterized protein At3g28850 [Gossypium raimondii]	[more]
gi\|802716097\|ref\|XP_012084880.1\|	3.1e-99	53.89	PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]	[more]
gi\|743831878\|ref\|XP_011024139.1\|	1.7e-97	53.58	PREDICTED: uncharacterized protein At3g28850-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013679	Cla013679.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 196..263 score: 1.1
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 184..289 score: 17
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 195..283 score: 1.4
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 189..283 score: 2.44
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 31..158 score: 1.2E-109coord: 193..340 score: 1.2E
None	No IPR available	PANTHER	PTHR10168:SF93	GLUTAREDOXIN FAMILY PROTEIN	coord: 31..158 score: 1.2E-109coord: 193..340 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla013679	Cla97C08G151190	Watermelon (97103) v2	wmwmbB100
Cla013679	Csa6G046340	Cucumber (Chinese Long) v2	cuwmB457
Cla013679	MELO3C019913	Melon (DHL92) v3.5.1	mewmB308
Cla013679	ClCG08G008430	Watermelon (Charleston Gray)	wcgwmB400
Cla013679	CSPI06G04120	Wild cucumber (PI 183967)	cpiwmB472
Cla013679	Cucsa.364490	Cucumber (Gy14) v1	cgywmB658
Cla013679	CmaCh15G005320	Cucurbita maxima (Rimu)	cmawmB258
Cla013679	CmoCh15G005420	Cucurbita moschata (Rifu)	cmowmB248
Cla013679	Lsi08G006320	Bottle gourd (USVL1VR-Ls)	lsiwmB475
Cla013679	Cp4.1LG13g10520	Cucurbita pepo (Zucchini)	cpewmB173
Cla013679	CsGy6G004090	Cucumber (Gy14) v2	cgybwmB428
Cla013679	MELO3C019913.2	Melon (DHL92) v3.6.1	medwmB302
Cla013679	Carg01666	Silver-seed gourd	carwmB0826
Cla013679	CsaV3_6G004420	Cucumber (Chinese Long) v3	cucwmB482
Cla013679	Bhi04G001305	Wax gourd	wgowmB313

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013679	Bottle gourd (USVL1VR-Ls)	lsiwmB289
Cla013679	Cucumber (Gy14) v2	cgybwmB352
Cla013679	Silver-seed gourd	carwmB0065
Cla013679	Silver-seed gourd	carwmB0838
Cla013679	Watermelon (97103) v2	wmwmbB092
Cla013679	Wax gourd	wgowmB539
Cla013679	Watermelon (97103) v1	wmwmB060
Cla013679	Cucurbita maxima (Rimu)	cmawmB667
Cla013679	Cucurbita maxima (Rimu)	cmawmB668
Cla013679	Cucurbita moschata (Rifu)	cmowmB357
Cla013679	Cucurbita moschata (Rifu)	cmowmB662
Cla013679	Cucurbita moschata (Rifu)	cmowmB663
Cla013679	Melon (DHL92) v3.5.1	mewmB047
Cla013679	Watermelon (Charleston Gray)	wcgwmB274
Cla013679	Cucumber (Chinese Long) v2	cuwmB380
Cla013679	Cucurbita pepo (Zucchini)	cpewmB394
Cla013679	Cucurbita pepo (Zucchini)	cpewmB395