Cla013600 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013600
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Peptidyl-prolyl cis-trans isomerase (AHRD V1 ***- D7MHP4_ARALL); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Location	Chr2 : 27683946 .. 27686033 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTCGCTCTCCTTTCCACCTCCTCCACCACCGCCGTCCTCCTACCTCCACCTCACCACCGCCGCCGTCTCTCCTCCGGAGACATCGCACTCCCCCGCCGCTCTCTCCTCCTTCTCTCCACTTCCCTCTCTCTCTCCACCGCCGTCATTCCCCCTCCCTCCCCGGCTTCTCCATCTCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCTACCAACTTCCTCCCTAACCGTGAATCCACCGATGATGGTGGCGATTCCCTCCTCTGCTCCGATTCCGTCCCCCTCGGCCGCCTCGTTATCGGCCTCTACGGCCATCTCGTTCCCATCACTGTCGCTAATTTCAAATCCATGTGTACTGGATCCTGCGGCTCCTCGTATAAAGGCACTTTGGTCCACAAAATCTTCCCAGGCCAATTCTTCCTCGCTGGCCGACAGGGACGCCGTGACAAAGGAGAAGTTCGCCCGCCGTTGCAATTGCCGAGAAATACGGAGTCGGTGAAGTCGGATTCGTTCTTGCTTTCGCATTCAAGAGGCGGCGTTGTTTCTCTTTGCCTTTCGGAGAACGATGACGACGACGAATTGAAATTGGATCCGAATTATCATAATGTGGAATTCTTGATCACCACTGGCCCTGGCCCCTGCCCTCAGCTTGATAGCAAGAACATTGTCTTCGGGACTGTGCTTGAAGGTACAAATTCAAACTCTAAATTTGAATTCTTAATCTGATCTCTATGATTAGTTTCAAAAGTTTCAATTAATCAGTTTCCTAATCATGTATTACCCACTTGATCACTCTCCAATTTTCTCCTATTTTTTACTTGCCCTTAAACTCAATTATTGATATCATTATATTTAGTATGACCCATGAACTTGAGCTTTTAGATTCATCCATTTAACATGATATTAGAGCTGGGAGCAAATTTAACAATGATATTTCCTATGTATAAATCCATGTAATATCATTTTCTTTTACAAAATTTAAAACACACAAGTTAAAGGAGTATTAAATTAGTGATATAATTAAATCTATTGGAGTGATCCACTTGTTTAAGCTGTTGGGTAACCATTGTCACTTAAGTAGGACATCATTTGCCATACAAATACAAAAAAACACAAATTACAATAAGATAGAACTTTTAAAATGAGTATAACTCAACTGACATAAAACTTCTACTATAGACCATAAGACTAGAGGTATGATCCCCCATCCCACATATTATTAAAAAAAAAAATCAAGAAAAATTACAATATAACAATAACTTTTTTGGGAGGGCTATTTCTCTCCTACAAACCATTTACTATGTCAGGCATTCTCTTACAAGTGAAGATGAATTATGAAGTTTTACTTGACTTTAAACCTCTTATAGAATATGGTAACACATTTGTTAAATCACTGATTGACACCAAAACTTAAGCTAATGAACTATGTTAAATTTAATTATATCAACACTTAATAACATAAGTTCTACCTCATTATGTATGTCAAGTAAATAGAATAGCATGTCTCGATTTATTCTCTGGATTTTACCAAGCTTTAAACCCTAATACAATCCACTTAACACGTTAGCTCATGATCAAGTATGTATGGGTATGTCCCTTATTTTTCACTAGGATAAAGTTTAATCACAGTATAGATGATTTATCAAGTTTTTGACCAAATCATAAGAAATAAACTATACCTTTTAAAACTAAGTTCAAATTGAAAAACTTCTAAATTTATAGTAGGACGGAATTAAAGCTAAGCAAGAAGGCTGAAATTTAGTAATTTAAACCGATACCCACTAATCATTCTTGTCTTGGTTGTGGAAAGCGCAAAGGTTACTGATATGTCTGTGAAATTGTGGGTTTAATTTTTCAGGTCTTGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTAGCCAAGTTTTTAGGAGATGAAAGAGCACAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAACTTAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAA

mRNA sequence

ATGGCCTTCGCTCTCCTTTCCACCTCCTCCACCACCGCCGTCCTCCTACCTCCACCTCACCACCGCCGCCGTCTCTCCTCCGGAGACATCGCACTCCCCCGCCGCTCTCTCCTCCTTCTCTCCACTTCCCTCTCTCTCTCCACCGCCGTCATTCCCCCTCCCTCCCCGGCTTCTCCATCTCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCTACCAACTTCCTCCCTAACCGTGAATCCACCGATGATGGTGGCGATTCCCTCCTCTGCTCCGATTCCGTCCCCCTCGGCCGCCTCGTTATCGGCCTCTACGGCCATCTCGTTCCCATCACTGTCGCTAATTTCAAATCCATGTGTACTGGATCCTGCGGCTCCTCGTATAAAGGCACTTTGGTCCACAAAATCTTCCCAGGCCAATTCTTCCTCGCTGGCCGACAGGGACGCCGTGACAAAGGAGAAGTTCGCCCGCCGTTGCAATTGCCGAGAAATACGGAGTCGGTGAAGTCGGATTCGTTCTTGCTTTCGCATTCAAGAGGCGGCGTTGTTTCTCTTTGCCTTTCGGAGAACGATGACGACGACGAATTGAAATTGGATCCGAATTATCATAATGTGGAATTCTTGATCACCACTGGCCCTGGCCCCTGCCCTCAGCTTGATAGCAAGAACATTGTCTTCGGGACTGTGCTTGAAGGTCTTGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTAGCCAAGTTTTTAGGAGATGAAAGAGCACAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAACTTAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAA

Coding sequence (CDS)

ATGGCCTTCGCTCTCCTTTCCACCTCCTCCACCACCGCCGTCCTCCTACCTCCACCTCACCACCGCCGCCGTCTCTCCTCCGGAGACATCGCACTCCCCCGCCGCTCTCTCCTCCTTCTCTCCACTTCCCTCTCTCTCTCCACCGCCGTCATTCCCCCTCCCTCCCCGGCTTCTCCATCTCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCTACCAACTTCCTCCCTAACCGTGAATCCACCGATGATGGTGGCGATTCCCTCCTCTGCTCCGATTCCGTCCCCCTCGGCCGCCTCGTTATCGGCCTCTACGGCCATCTCGTTCCCATCACTGTCGCTAATTTCAAATCCATGTGTACTGGATCCTGCGGCTCCTCGTATAAAGGCACTTTGGTCCACAAAATCTTCCCAGGCCAATTCTTCCTCGCTGGCCGACAGGGACGCCGTGACAAAGGAGAAGTTCGCCCGCCGTTGCAATTGCCGAGAAATACGGAGTCGGTGAAGTCGGATTCGTTCTTGCTTTCGCATTCAAGAGGCGGCGTTGTTTCTCTTTGCCTTTCGGAGAACGATGACGACGACGAATTGAAATTGGATCCGAATTATCATAATGTGGAATTCTTGATCACCACTGGCCCTGGCCCCTGCCCTCAGCTTGATAGCAAGAACATTGTCTTCGGGACTGTGCTTGAAGGTCTTGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTAGCCAAGTTTTTAGGAGATGAAAGAGCACAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAACTTAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAA

Protein sequence

MAFALLSTSSTTAVLLPPPHHRRRLSSGDIALPRRSLLLLSTSLSLSTAVIPPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHSRGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP

Homology

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BLAST of Cla013600 vs. Swiss-Prot
Match: CPY28_ARATH (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana GN=CYP28 PE=1 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.1e-99
Identity = 192/299 (64.21%), Postives = 224/299 (74.92%), Query Frame = 1


Query: 10  STTAVLLPPPHHRRRLSSGDIALPRRSLLLLSTSLSLSTAVIPPPSPASPSPDTTITDRV 69
           +++++L+PP   RR L             LLST+++    V PPP    PSPD TITDRV
Sbjct: 2   ASSSILIPPILTRRNL-------------LLSTTIA---TVTPPPPAKPPSPDITITDRV 61

Query: 70  FIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKSMCTGSC 129
           F+DFS+CPT F  +  +T     +  CSDS PLGR+V+GLYG  VPITV+ FK MCT S 
Sbjct: 62  FLDFSLCPTYFRSDPSATLSS--TTPCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS- 121

Query: 130 GSSYKGTLVHKIFPGQFFLAGRQG--RRDKGEVRPPLQ-LPRNTESVKSDSFLLSHSRGG 189
            +SYK T VHKIFPGQ+FLAGRQG  RRD  EV   L+ LPRNT+ V S +FLL H+R G
Sbjct: 122 STSYKNTPVHKIFPGQYFLAGRQGGGRRDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAG 181

Query: 190 VVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAAISS 249
           VVSLCLSENDDDD+++LDP+Y NVEFLITTGPGP PQLD  NIVFGTVLEGLDVV +ISS
Sbjct: 182 VVSLCLSENDDDDDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 241

Query: 250 TPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP 306
            PTYKPSE I+QFND A+FLGDERAQNAR++WNRPL+TV+IS CGELKV  PSLSPTLP
Sbjct: 242 IPTYKPSENIKQFNDFAEFLGDERAQNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 281

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BLAST of Cla013600 vs. Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppi1 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.4e-16
Identity = 54/157 (34.39%), Postives = 77/157 (49.04%), Query Frame = 1


Query: 101 PLGRLVIGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEV 160
           PLGR+V  L+  +VP T ANF+++CTG  G  Y G+  H++ P QF L G    R  G  
Sbjct: 14  PLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIP-QFMLQGGDFTRGNGTG 73

Query: 161 RPPLQLPRNTESVKSDSFLLSHSRGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGP 220
              +      E    ++F L H++ G++S+              PN +  +F ITT    
Sbjct: 74  GKSIY----GEKFPDENFALKHNKPGLLSMA----------NAGPNTNGSQFFITT--VV 133

Query: 221 CPQLDSKNIVFGTVLEGLDVVAAISSTPTYKPSERIR 258
            P LD K++VFG V EG+DVV  + S  +   + R R
Sbjct: 134 TPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRAR 153

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BLAST of Cla013600 vs. Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CYP1 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15
Identity = 51/150 (34.00%), Postives = 75/150 (50.00%), Query Frame = 1


Query: 97  SDSVPLGRLVIGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRD 156
           +D   LG++   LY  +VP T  NF+++CTG  G  YKG++ H++ P QF L G      
Sbjct: 10  ADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFGYKGSIFHRVIP-QFMLQGGDFTNF 69

Query: 157 KGEVRPPLQLPRNTESVKSDSFLLSHSRGGVVSLCLSENDDDDELKLDPNYHNVEFLITT 216
            G     +   +  +    ++F+  H R G++S+              PN +  +F ITT
Sbjct: 70  NGTGGKSIYGTKFAD----ENFVKRHDRPGLLSMA----------NAGPNTNGSQFFITT 129

Query: 217 GPGPCPQLDSKNIVFGTVLEGLDVVAAISS 247
              PCP LD K++VFG V +GLD+V  I S
Sbjct: 130 --VPCPWLDGKHVVFGEVTDGLDIVKKIES 142

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BLAST of Cla013600 vs. Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.4e-15
Identity = 72/231 (31.17%), Postives = 102/231 (44.16%), Query Frame = 1


Query: 24  RLSSGDIALPRRSLLLLSTSLSLSTAVIPPPSPASPSP---DTTITDRVFIDFSICPTNF 83
           +LSS     PR S+   S + S+++  I   S A          +T ++F D  I     
Sbjct: 36  KLSSTYHYAPRLSVSQQSKAKSITSRRITCASGAQGEVAELQAKVTSKIFFDIEI----- 95

Query: 84  LPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHK 143
                    GG+S         GR+VIGL+G  VP TV NFK++ TG+ G  Y+G+  H+
Sbjct: 96  ---------GGESA--------GRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHR 155

Query: 144 IFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHSRGGVVSLCLSENDDDDE 203
           I P  F + G       G     +         + +SF L H   GV+S+          
Sbjct: 156 IIP-NFMIQGGDFTEGNGTGGVSIY----GSKFEDESFDLKHVGPGVLSMA--------- 215

Query: 204 LKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAAISSTPTYK 252
               PN +  +F I T   P P LD++++VFG V+EGLDVV  + S  T K
Sbjct: 216 -NAGPNTNGSQFFICT--VPTPWLDNRHVVFGHVIEGLDVVKQLESQETSK 227

[Close]

BLAST of Cla013600 vs. Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cpr2 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.2e-15
Identity = 54/160 (33.75%), Postives = 80/160 (50.00%), Query Frame = 1


Query: 101 PLGRLVIGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEV 160
           PLGR+V+GLYG  VP T  NF+++ TG  G  Y+G+  H++    F + G    R  G  
Sbjct: 48  PLGRIVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIK-SFMIQGGDFTRGDGTG 107

Query: 161 RPPLQLPRNTESVKSDSFLLSHSRGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGP 220
              +      E    ++F L H+R G++S+  +  D +            +F ITT   P
Sbjct: 108 GKSIY----GEKFADENFKLRHTRKGLLSMANAGKDTNGS----------QFFITT--VP 167

Query: 221 CPQLDSKNIVFGTVLEGLDVVAAISSTPT---YKPSERIR 258
            P LD +++VFG VLEG +VV  I + P     KP+E ++
Sbjct: 168 TPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVK 190

[Close]

BLAST of Cla013600 vs. TrEMBL
Match: A0A0A0LFD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009340 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 4.6e-162
Identity = 290/309 (93.85%), Postives = 294/309 (95.15%), Query Frame = 1


Query: 1   MAFALLSTSS----TTAVLLPPPHHRRRLSSGDIALPRRSLLLLSTSLSLSTAVIPPPSP 60
           MAFALLSTSS    TT  LLPP H+ RRL SGDI LPRRSLLLLSTSLSLSTAV PPPS 
Sbjct: 1   MAFALLSTSSSAAATTVALLPPHHNHRRLRSGDITLPRRSLLLLSTSLSLSTAVNPPPSL 60

Query: 61  ASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPI 120
           ASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSV LGRLVIGLYGHLVP 
Sbjct: 61  ASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVLLGRLVIGLYGHLVPT 120

Query: 121 TVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSD 180
           T +NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSD
Sbjct: 121 TASNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSD 180

Query: 181 SFLLSHSRGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLE 240
           SFLLSHSRGGV+SLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLE
Sbjct: 181 SFLLSHSRGGVISLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLE 240

Query: 241 GLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVA 300
           GLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVA
Sbjct: 241 GLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVA 300

Query: 301 KPSLSPTLP 306
           KPSLSPTLP
Sbjct: 301 KPSLSPTLP 309

[Close]

BLAST of Cla013600 vs. TrEMBL
Match: M1D130_SOLTU (Peptidyl-prolyl cis-trans isomerase OS=Solanum tuberosum GN=PGSC0003DMG400030738 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 4.0e-113
Identity = 211/302 (69.87%), Postives = 248/302 (82.12%), Query Frame = 1


Query: 12  TAVLLPPPHHRRRLSSGDIA----LPRRSLLLLSTSLS----LSTAVIPPPSPASPSPDT 71
           +A LLP P H RR S+        L RR+LL LST+L+    +ST+V  PP    PSPDT
Sbjct: 4   SATLLPTPPHLRRHSTSPFPPSPHLNRRNLLFLSTTLTFPSTISTSVAAPP----PSPDT 63

Query: 72  TITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKS 131
           TIT+RVF+DFSICP N+  NR   DD  +   C+DS P+GRLV+GLYG+LVPITV+NFK+
Sbjct: 64  TITERVFLDFSICP-NYFTNRNLGDDLSN---CADSEPIGRLVLGLYGNLVPITVSNFKA 123

Query: 132 MCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHS 191
           MCTGS GS+YKGTLV KIFPGQFF+AGRQGRRDKGEV+PPL+L RN ES++S +FLL HS
Sbjct: 124 MCTGSSGSTYKGTLVQKIFPGQFFMAGRQGRRDKGEVKPPLKLIRNVESIESKAFLLEHS 183

Query: 192 RGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAA 251
           R GVVSL LSENDDDD+LKL+PNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLD+V  
Sbjct: 184 RAGVVSLPLSENDDDDDLKLNPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDIVTT 243

Query: 252 ISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPT 306
           I++ PTYKPSE IRQ+ND A+ +GD RA+ AR IWN+PL+TVYISDCGELKVAKP+LSP+
Sbjct: 244 IAAIPTYKPSENIRQYNDFAELIGDGRAKTARAIWNKPLKTVYISDCGELKVAKPTLSPS 297

[Close]

BLAST of Cla013600 vs. TrEMBL
Match: K4CBI2_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 7.5e-112
Identity = 209/302 (69.21%), Postives = 246/302 (81.46%), Query Frame = 1


Query: 12  TAVLLPPPHHRRRLSSGDIA----LPRRSLLLLSTSLS----LSTAVIPPPSPASPSPDT 71
           +A LLP P H RR S+        L RR LL LST+L+    +ST+V  PP    PSPDT
Sbjct: 4   SATLLPTPPHLRRHSTSAFPPTPHLNRRKLLFLSTTLTFPSTISTSVAAPP----PSPDT 63

Query: 72  TITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKS 131
           TIT+RVF+D SICP N+  NR   DD  +   C+DS P+GRLV+GLYG+LVPITV+NFK+
Sbjct: 64  TITERVFLDLSICP-NYFKNRNLGDDLSN---CADSEPIGRLVLGLYGNLVPITVSNFKA 123

Query: 132 MCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHS 191
           MCTGS GS+YKGTLV KIFPGQFF+AGRQGRRDKGEV+PPL+L RN ES++S +FLL HS
Sbjct: 124 MCTGSSGSTYKGTLVQKIFPGQFFMAGRQGRRDKGEVKPPLKLIRNVESIESKAFLLEHS 183

Query: 192 RGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAA 251
           R GVVSL L+ENDDDD+LKL+PNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLD+V  
Sbjct: 184 RAGVVSLPLAENDDDDDLKLNPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDIVTT 243

Query: 252 ISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPT 306
           I++ PTYKPSE IRQ+ND A+ +GD RA+ AR IWN+PL+TVYISDCGELKVAKP+LSP+
Sbjct: 244 IAAIPTYKPSENIRQYNDFAELIGDGRAKTARAIWNKPLKTVYISDCGELKVAKPTLSPS 297

[Close]

BLAST of Cla013600 vs. TrEMBL
Match: A0A068UQ04_COFCA (Peptidyl-prolyl cis-trans isomerase OS=Coffea canephora GN=GSCOC_T00031265001 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.7e-111
Identity = 204/299 (68.23%), Postives = 246/299 (82.27%), Query Frame = 1


Query: 7   STSSTTAVLLPPPHHRRRLSSGDIALPRRSLLLLSTSLSLSTAVIPPPSPASPSPDTTIT 66
           ST+ +++ LLP  HH +   +    L RRSLL LSTSLSL T +    +   P PDTTIT
Sbjct: 4   STTLSSSPLLPHHHHHQPTVN---KLHRRSLLFLSTSLSLPTPLSSSSTSPPPPPDTTIT 63

Query: 67  DRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKSMCT 126
           DRVF+DFSICP+ FL NR     G +  LC+D+ P+GRLV+GLYG+ VPITV+NFK+MCT
Sbjct: 64  DRVFMDFSICPSYFL-NRNL---GDELSLCTDAEPVGRLVLGLYGNHVPITVSNFKAMCT 123

Query: 127 GSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHSRGG 186
           GSCGSSYKGTLV KIFPGQFFLAG+QGR+DKGEV+PPL+L RNTE+V+S +F L H+R G
Sbjct: 124 GSCGSSYKGTLVQKIFPGQFFLAGKQGRKDKGEVKPPLELTRNTETVESKAFTLEHTRPG 183

Query: 187 VVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAAISS 246
           ++SLCLSEND++D++KLDPNYHNVEF+ITTGPGPCPQLD KNIVFG VLEGLDVV  IS+
Sbjct: 184 ILSLCLSENDEEDDIKLDPNYHNVEFMITTGPGPCPQLDYKNIVFGAVLEGLDVVTTISA 243

Query: 247 TPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP 306
            PTYKP+ERIRQ+NDLA+FLGDERA+ AR IWNRPL+T+YISDCGEL V KP+L  +LP
Sbjct: 244 IPTYKPAERIRQYNDLAQFLGDERAKIARAIWNRPLKTLYISDCGELNVTKPTLFRSLP 295

[Close]

BLAST of Cla013600 vs. TrEMBL
Match: A0A022QBE0_ERYGU (Peptidyl-prolyl cis-trans isomerase OS=Erythranthe guttata GN=MIMGU_mgv1a011062mg PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.2e-111
Identity = 201/290 (69.31%), Postives = 243/290 (83.79%), Query Frame = 1


Query: 16  LPPPHHRRRLSSGDIALPRRSLLLLSTSLSLSTAVIPPPSPASPSPDTTITDRVFIDFSI 75
           +PP HH R      + L RRSLL LST+L L    +   + A PSPDTTITDRVF+DFS+
Sbjct: 14  VPPLHHHR------LPLNRRSLLFLSTTLPLINP-LTSTAAAPPSPDTTITDRVFLDFSL 73

Query: 76  CPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKSMCTGSCGSSYKG 135
           CP+ F   +  T    D  LCS+S PLGR+V+GLYG+L+PITV+NFKSMC+G+ GS+YKG
Sbjct: 74  CPSYF---QSRTLGESDLSLCSESEPLGRVVLGLYGNLLPITVSNFKSMCSGTSGSTYKG 133

Query: 136 TLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHSRGGVVSLCLSEN 195
           TLVHKIFPGQFF+AGRQGRRDKGEV+PP ++ RNTE+++S +FLL HSR G++SLCLSEN
Sbjct: 134 TLVHKIFPGQFFVAGRQGRRDKGEVKPPPKMVRNTETIESKAFLLEHSRPGLLSLCLSEN 193

Query: 196 DDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAAISSTPTYKPSER 255
           DDDD+LKL+PNYHNVEFLITTGPGPCP LDSKNIVFG+VL+GLDVV +I+S PTYKP ER
Sbjct: 194 DDDDDLKLNPNYHNVEFLITTGPGPCPDLDSKNIVFGSVLQGLDVVTSIASIPTYKPGER 253

Query: 256 IRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP 306
           IRQ+ND A+F+GDERA++AR IWNRPL+T+YISDCGELKVAK +LSPTLP
Sbjct: 254 IRQYNDFAEFIGDERAKSARAIWNRPLKTLYISDCGELKVAKTTLSPTLP 293

[Close]

BLAST of Cla013600 vs. NCBI nr
Match: gi|778666316|ref|XP_004139269.2| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucumis sativus])

HSP 1 Score: 578.6 bits (1490), Expect = 6.6e-162
Identity = 290/309 (93.85%), Postives = 294/309 (95.15%), Query Frame = 1


Query: 1   MAFALLSTSS----TTAVLLPPPHHRRRLSSGDIALPRRSLLLLSTSLSLSTAVIPPPSP 60
           MAFALLSTSS    TT  LLPP H+ RRL SGDI LPRRSLLLLSTSLSLSTAV PPPS 
Sbjct: 1   MAFALLSTSSSAAATTVALLPPHHNHRRLRSGDITLPRRSLLLLSTSLSLSTAVNPPPSL 60

Query: 61  ASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPI 120
           ASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSV LGRLVIGLYGHLVP 
Sbjct: 61  ASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVLLGRLVIGLYGHLVPT 120

Query: 121 TVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSD 180
           T +NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSD
Sbjct: 121 TASNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSD 180

Query: 181 SFLLSHSRGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLE 240
           SFLLSHSRGGV+SLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLE
Sbjct: 181 SFLLSHSRGGVISLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLE 240

Query: 241 GLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVA 300
           GLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVA
Sbjct: 241 GLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVA 300

Query: 301 KPSLSPTLP 306
           KPSLSPTLP
Sbjct: 301 KPSLSPTLP 309

[Close]

BLAST of Cla013600 vs. NCBI nr
Match: gi|659070798|ref|XP_008456727.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase B [Cucumis melo])

HSP 1 Score: 570.5 bits (1469), Expect = 1.8e-159
Identity = 286/310 (92.26%), Postives = 293/310 (94.52%), Query Frame = 1


Query: 1   MAFALLSTSSTTAV-----LLPPPHHRRRLSSGDIALPRRSLLLLSTSLSLSTAVIPPPS 60
           MAFALLST S++A      LLPP H+ RR  SGD  LPRRSLLLLSTSLSLSTA+ PPPS
Sbjct: 1   MAFALLSTYSSSAAAITTALLPPHHNYRRFRSGDTTLPRRSLLLLSTSLSLSTAINPPPS 60

Query: 61  PASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVP 120
           PASPSPDTTITDRVFIDFSICPTNFLPNRESTDDG DSLLCSDSV LGRLVIGLYGHLVP
Sbjct: 61  PASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGSDSLLCSDSVLLGRLVIGLYGHLVP 120

Query: 121 ITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKS 180
           ITV+NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKS
Sbjct: 121 ITVSNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKS 180

Query: 181 DSFLLSHSRGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVL 240
           DSFLLSHSRGGVVSLCLSENDDDD+LKLDP+YHNVEFLITTGPGPCPQLDSKNIVFGTVL
Sbjct: 181 DSFLLSHSRGGVVSLCLSENDDDDDLKLDPDYHNVEFLITTGPGPCPQLDSKNIVFGTVL 240

Query: 241 EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKV 300
           EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYIS CGELKV
Sbjct: 241 EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISGCGELKV 300

Query: 301 AKPSLSPTLP 306
           AKPSLSPTLP
Sbjct: 301 AKPSLSPTLP 310

[Close]

BLAST of Cla013600 vs. NCBI nr
Match: gi|747074117|ref|XP_011084039.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Sesamum indicum])

HSP 1 Score: 417.5 bits (1072), Expect = 1.9e-113
Identity = 209/287 (72.82%), Postives = 243/287 (84.67%), Query Frame = 1


Query: 19  PHHRRRLSSGDIALPRRSLLLLSTSLSLSTAVIPPPSPASPSPDTTITDRVFIDFSICPT 78
           PHH+R      + L RRSLL LST+L LST +    SP  PSPDTT+TDRVF+DFS+CP+
Sbjct: 22  PHHQR------LPLNRRSLLFLSTTLPLSTPLTSSASPP-PSPDTTVTDRVFLDFSLCPS 81

Query: 79  NFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKSMCTGSCGSSYKGTLV 138
            FL NR  T    D  +C++S PLGRLV+GLYG+LVPITV+NFK+MC GS GS+YKGTLV
Sbjct: 82  YFL-NR--TLGEYDLSVCAESEPLGRLVLGLYGNLVPITVSNFKAMCNGSSGSTYKGTLV 141

Query: 139 HKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHSRGGVVSLCLSENDDD 198
            KIFPGQFF+AGRQGRRDKGEV+PP++L RNTE+V S +FLL HSR G+VSLCLSENDDD
Sbjct: 142 QKIFPGQFFVAGRQGRRDKGEVKPPVELARNTETVDSKAFLLEHSRPGLVSLCLSENDDD 201

Query: 199 DELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQ 258
           D+LKL PNYHNVEFLITTGPGPCPQLDSKNIVFG+VLEGLDVV AI+S PTYKP+ERIRQ
Sbjct: 202 DDLKLSPNYHNVEFLITTGPGPCPQLDSKNIVFGSVLEGLDVVTAIASIPTYKPAERIRQ 261

Query: 259 FNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP 306
           +ND A+F+GD RA+ AR IWNRPL+T+YISDCGELKVAKP+L PTLP
Sbjct: 262 YNDFAEFIGDGRAKTARAIWNRPLKTLYISDCGELKVAKPTLPPTLP 298

[Close]

BLAST of Cla013600 vs. NCBI nr
Match: gi|565387495|ref|XP_006359534.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic isoform X1 [Solanum tuberosum])

HSP 1 Score: 416.0 bits (1068), Expect = 5.7e-113
Identity = 211/302 (69.87%), Postives = 248/302 (82.12%), Query Frame = 1


Query: 12  TAVLLPPPHHRRRLSSGDIA----LPRRSLLLLSTSLS----LSTAVIPPPSPASPSPDT 71
           +A LLP P H RR S+        L RR+LL LST+L+    +ST+V  PP    PSPDT
Sbjct: 4   SATLLPTPPHLRRHSTSPFPPSPHLNRRNLLFLSTTLTFPSTISTSVAAPP----PSPDT 63

Query: 72  TITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKS 131
           TIT+RVF+DFSICP N+  NR   DD  +   C+DS P+GRLV+GLYG+LVPITV+NFK+
Sbjct: 64  TITERVFLDFSICP-NYFTNRNLGDDLSN---CADSEPIGRLVLGLYGNLVPITVSNFKA 123

Query: 132 MCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHS 191
           MCTGS GS+YKGTLV KIFPGQFF+AGRQGRRDKGEV+PPL+L RN ES++S +FLL HS
Sbjct: 124 MCTGSSGSTYKGTLVQKIFPGQFFMAGRQGRRDKGEVKPPLKLIRNVESIESKAFLLEHS 183

Query: 192 RGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAA 251
           R GVVSL LSENDDDD+LKL+PNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLD+V  
Sbjct: 184 RAGVVSLPLSENDDDDDLKLNPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDIVTT 243

Query: 252 ISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPT 306
           I++ PTYKPSE IRQ+ND A+ +GD RA+ AR IWN+PL+TVYISDCGELKVAKP+LSP+
Sbjct: 244 IAAIPTYKPSENIRQYNDFAELIGDGRAKTARAIWNKPLKTVYISDCGELKVAKPTLSPS 297

[Close]

BLAST of Cla013600 vs. NCBI nr
Match: gi|970042967|ref|XP_015082882.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Solanum pennellii])

HSP 1 Score: 411.8 bits (1057), Expect = 1.1e-111
Identity = 207/302 (68.54%), Postives = 247/302 (81.79%), Query Frame = 1


Query: 12  TAVLLPPPHHRRRLSSGDIA----LPRRSLLLLSTSLS----LSTAVIPPPSPASPSPDT 71
           +A LLP P H RR S+        + RR+LL  ST+L+    +ST+V  PP    PSPDT
Sbjct: 4   SATLLPTPPHLRRHSTSAFPPSPHINRRNLLFFSTTLTFPSTISTSVAAPP----PSPDT 63

Query: 72  TITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVPLGRLVIGLYGHLVPITVANFKS 131
           TIT+RVF+DFSICP N+  NR   DD  +   C+DS P+GRLV+GLYG+LVPITV+NFK+
Sbjct: 64  TITERVFLDFSICP-NYFTNRNLGDDLSN---CADSEPIGRLVLGLYGNLVPITVSNFKA 123

Query: 132 MCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKSDSFLLSHS 191
           MCTGS GS+YKGTLV KIFPGQFF+AGRQGRRDKGEV+PPL+L RN ES++S +FLL HS
Sbjct: 124 MCTGSSGSTYKGTLVQKIFPGQFFMAGRQGRRDKGEVKPPLKLIRNVESIESKAFLLEHS 183

Query: 192 RGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAA 251
           R GV+SL L+ENDDDD+LKL+PNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLD+V  
Sbjct: 184 RAGVISLPLAENDDDDDLKLNPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDIVTT 243

Query: 252 ISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPT 306
           I++ PTYKPSE IRQ+ND A+ +GD RA+ AR IWN+PL+TVYISDCGELKVAKP+LSP+
Sbjct: 244 IAAIPTYKPSENIRQYNDFAELIGDGRAKTARAIWNKPLKTVYISDCGELKVAKPTLSPS 297

The following BLAST results are available for this feature:

BLAST of Cla013600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CPY28_ARATH	2.1e-99	64.21	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana...	[more]
CYPH_SCHPO	8.4e-16	34.39	Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / A...	[more]
PPIA_CANAL	1.4e-15	34.00	Peptidyl-prolyl cis-trans isomerase OS=Candida albicans (strain SC5314 / ATCC MY...	[more]
CYPB_VICFA	2.4e-15	31.17	Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1	[more]
PPIB_ASPFU	3.2e-15	33.75	Peptidyl-prolyl cis-trans isomerase B OS=Neosartorya fumigata (strain ATCC MYA-4...	[more]

BLAST of Cla013600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFD1_CUCSA	4.6e-162	93.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009340 PE=4 SV=1	[more]
M1D130_SOLTU	4.0e-113	69.87	Peptidyl-prolyl cis-trans isomerase OS=Solanum tuberosum GN=PGSC0003DMG400030738...	[more]
K4CBI2_SOLLC	7.5e-112	69.21	Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum PE=3 SV=1	[more]
A0A068UQ04_COFCA	1.7e-111	68.23	Peptidyl-prolyl cis-trans isomerase OS=Coffea canephora GN=GSCOC_T00031265001 PE...	[more]
A0A022QBE0_ERYGU	2.2e-111	69.31	Peptidyl-prolyl cis-trans isomerase OS=Erythranthe guttata GN=MIMGU_mgv1a011062m...	[more]

BLAST of Cla013600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666316\|ref\|XP_004139269.2\|	6.6e-162	93.85	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucumis sat...	[more]
gi\|659070798\|ref\|XP_008456727.1\|	1.8e-159	92.26	PREDICTED: peptidyl-prolyl cis-trans isomerase B [Cucumis melo]	[more]
gi\|747074117\|ref\|XP_011084039.1\|	1.9e-113	72.82	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Sesamum ind...	[more]
gi\|565387495\|ref\|XP_006359534.1\|	5.7e-113	69.87	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic isoform X1 [...	[more]
gi\|970042967\|ref\|XP_015082882.1\|	1.1e-111	68.54	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Solanum pen...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom
IPR024936	Cyclophilin-type_PPIase

Vocabulary: **Biological Process**
Term	Definition
GO:0000413	protein peptidyl-prolyl isomerization
GO:0006457	protein folding

Vocabulary: **Molecular Function**
Term	Definition
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0016853	isomerase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU14940	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU75959	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013600	Cla013600.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU14940	WMU14940	transcribed_cluster
WMU75959	WMU75959	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 226..241 score: 7.6E-8coord: 138..150 score: 7.6E-8coord: 109..124 score: 7.
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 102..254 score: 1.9
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50072	CSA_PPIASE_2	coord: 101..292 score: 20
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 98..252 score: 3.4E-104coord: 9..75 score: 3.4E-104coord: 279..302 score: 3.4E
None	No IPR available	PANTHER	PTHR11071:SF286	SUBFAMILY NOT NAMED	coord: 98..252 score: 3.4E-104coord: 9..75 score: 3.4E-104coord: 279..302 score: 3.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla013600	Cla97C02G042950	Watermelon (97103) v2	wmwmbB316
Cla013600	Csa2G009340	Cucumber (Chinese Long) v2	cuwmB147
Cla013600	MELO3C004443	Melon (DHL92) v3.5.1	mewmB418
Cla013600	ClCG02G017260	Watermelon (Charleston Gray)	wcgwmB197
Cla013600	CSPI02G02350	Wild cucumber (PI 183967)	cpiwmB149
Cla013600	Cucsa.132690	Cucumber (Gy14) v1	cgywmB223
Cla013600	CmaCh05G012450	Cucurbita maxima (Rimu)	cmawmB764
Cla013600	CmoCh05G012730	Cucurbita moschata (Rifu)	cmowmB757
Cla013600	Lsi11G003840	Bottle gourd (USVL1VR-Ls)	lsiwmB107
Cla013600	Cp4.1LG11g10330	Cucurbita pepo (Zucchini)	cpewmB113
Cla013600	CsGy2G002430	Cucumber (Gy14) v2	cgybwmB140
Cla013600	MELO3C004443.2	Melon (DHL92) v3.6.1	medwmB407
Cla013600	Carg23021	Silver-seed gourd	carwmB1071
Cla013600	CsaV3_2G003530	Cucumber (Chinese Long) v3	cucwmB159
Cla013600	Bhi06G001577	Wax gourd	wgowmB133

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013600	Cucurbita moschata (Rifu)	cmowmB156
Cla013600	Cucurbita pepo (Zucchini)	cpewmB809
Cla013600	Silver-seed gourd	carwmB0242