Cla013137 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013137
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Tetratricopeptide repeat domain-containing protein (AHRD V1 **-- F4K786_ARATH)
Location	Chr5 : 11444791 .. 11454650 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGAAGGTGGTTTAGGTGAGTCAATTCTCTGCATCAGAAGATTGCGATATCTTGCTAAGGTTAGGCTTTATCCTACATTGGGAACTGTGATTTTTCTACTCTGATACCAACTTTATTTGTGAACAAAAGAATATTGTGTTTTGTCAATATCTTGATGGTAATGCAAGCGCTCCCTTATATTTTTTTCATTCATCAGTCAAATTGTTTCTTATCTAAAAAGAAATGCAAGGTTCCTTATATAAAGGCCATCTACTAGAAAAAGAACTATATCGATAAAAGAAAACATGAGAGATAGTTAAAGCATATGCGAGTTTGTTATTTGCCAATAACATTAGATTTCTTCACTGTCATTTATGATTGTAGAATATATTAAAGCATATGCGAGCCCGTTAGTTCTATGTTGTACATCTTCCTCTTCCAATTCTTTCCCCTTATAACGTTCTATTGTTCTACTTGAGCTGCGGTTAATGTTTTTGTTATTTTGCTGATGCTCCAGATGCATATGAAGTCAAATAATCTTTTGGAGGCTGAGAATGTACAAAGAAAAATTTTGCACATTATGGAATTATCAAAGGTTCATCTTGATTTTTTTTTCCATCTTTTTATGTTTCAGCTATTGATTGGTATGTAGTGCTCGTAATGGCTTTTCCTTTTTAATGTGTCTTTAATAACTTCTAGGTTTCTCTATCTCTCTCTTTCTCTCTCTCTATTTTATGTCTTAACAAAGAATTTTTACTTCATGATTCTAATCTAAAGGACATGGGTCTTGGATCTTGACATGACAGATCCAAGGCAATATGTTAAGGGCAGATTGATTAGAGGTGATGAATGATCAAATCTTTTCCATTGTTTGGTGAATAGTTTAAAGAAGCAATTTGTTATTGAAATACCTGATACTTTTTTTTTTTTTTATATCCGTGAGTGTCCGGGCCAACTTATGCGCACTTCGACTAATCTCACGAGACAACCTGCCTGATCCTACAACATTTGGATGTCAAGGAAACTCGTAGGATATTAATTCCTAGGGAGGTGACTACCATGGGTTGAACCTATGACATCTTAGCTATGTATTGAGACTATGTCTCATTTTTTACCATTACGCCAACCCATGATGGTTTGACATACCCAGTGAAAATGAGAGTTAACTTAACATAGGAGAGTATTTAGCGTACAAAGTGACAGAATTTTTTAGCAACCTCTACAACCAAAAGAGAGAAAAAGAGACAATCAATAACTCCTTACCACTGCATTTCATATGACCAAACTTATGAGTTATGACAACGATGACATACTCAAGTTTGTCTTTGATCATCAAAACTAGTCTTGAAATGATCGATATCAGATATTTTTGCAGGCTTTTGGTCCATCATTCCATGAAAAAACAGACACAAGAAAACATAGACGCAAAATCTGATTTGAATGCACAAAATTAGAGTTGGGCACAAACCTATGTATGGACAGAATTGGAAACCAAAAGATCTATTTTTTATATTATTTTATCTTTTTCCTTTTTCAAAATCATTCCAAATATGAACTACTTTTTATCAAAATAAGCATACAAACCAAATGTGGATAGCAGGATTGTTGAACCACGGTGATGGATGGAGAAAATTTCAACCACTCATGCATCCTCACGAGCCAGCATGTGAGACAGGGTGGAGGGTTTTGCTGGTGCGTGGAGCCCATGCATGACTGATTTGATAGTTAAACTTCAGGGTTTTGTAAATTAACCGATGGCTTTTCTTGAGGGTTGAAGCACTCTAAAGTAGTGTTTCTGAACTCCAAATTCTAAAGGCCACAAAACCTTACGAGTGATACATACTTACATATCGTTCCATGCACTATACACATACACAAGGTTGTTACTTCTGAAACATAACAAGTATCAAAACTAATGTTTAGTGTATTGTGTATTGTATGTTTTAATTTTTAACTAACATGACATCTATCTAATAGTGTTTCTTTAACCTCCATGGGTTTTTCTTATGGGTGTAGGGATGGAATTCTCTGGAAACTATAAATTCTGCTGACAGCTTGGCCTCAACGCTATATGCCAATGGATGCCTGAAGGAAGCACAAGAGCTTCTTGAGAGGTAAACTGACAAGTGTTAGTAATTTAAAAAAGAAGGTTTTTCTAATGAAGTTGTTATTTTCAGGTGTCTTGATGCACGGAAAAGTTTACTTCCTGAGGACCACATCCAGGTTTTCAACTTTTAACATTCAGATTGAATTCCAAGAATGCAATTAATAAAATAACTGTACTCTTTTTTCCTTTCTAATGAATTTTTGTTTTATGTATGTGAGCGAAATGATGGGGTTTTAGAAAATGAATTTATTTTGGTTTTGGTTTGAACCGTGTGATACATCTTGCTCCTCTTCTCCTCTTCTCATAAACCCTAAAACCCTACATCTTACTCTTCTCATAAATTTGTCACATGATGGATTAATTAATTAAATGGCACTTTTGACTTCCAATAACTCCATATCTGCTAATGTGGTGCAGATTGGTGCTAACATGCTTCACCTTGCTCGAGTGGTAATGCTAAGTTCCAATGAACTAAACGCGACTGATATTTCTAAAGCAGTTATTGCAATTGATAAAGCAAGAGAACTTTTAAACAACTCTTTAAGGTTTGTATTGAGGACTTCCTTCTTTTTTTTTTTTTCTTTTTTTCTTTTTTTTGGTTGAATGAAATATATAAAAGATGGGAAAGTGTGAAGACCCAGCCGCTATAGGTGGTTACACAAGAGACCTCCATGTAGCGACAAGGTAGAATGACTAATTAGAGAAGGGAGAAAACATTTACACCAATAATGGTGATACAAAGAGTATTATCCATTAATGATTCGAAGGAGGAAACTTTATCATTGCTTTTTATTAGAAAGGAAACGGCTGGATCTTCATATATAAGCAACAAAAATATCCACACTTTTATTTAATCTACATCCTTTCTTGTTTTAACTTGGTGTCATGGAGTAAACCATCTCCTCCCTTTTGTAACTATAGCCTATTGATCCTCTTGATACATGGAGGTGTTTTTTTTAGTTAACCATATATAGGGCTTTGCAACTTAGCTAGAAATCCTGAATGTTTTATTTATTTATTTATTTTTATTTTTTATGATGATATTGAGTACTTAATGGCATTATTGATTGAGGAATTCAAATCTTTGTTGGAAATTAAGTCAAGACCATCTAGCAACATTCTGAAAGATTTACTTTGTGTAGCCTTTTTTTTTTTATTGAGCTGATTAAATATGTTCAAGTGTGGTCATATATATGTTACAAACCACCTGACATGGACATGCTTTAGCCCCAAAATGTTTTGTGTGGACGTGAAAGCTTTAGCCTCACATTCTACCCTTTTCTCATGTCTATAAGGAGGCATTTGGAGCAAGGAGTGGAGTTATTTAGTATGAGGAGTTGTTTAGTTGTGGGGCCTATAATGTAAGGAGTTAGTAAGTTGTAGAATTAATGTTAGTAAACCATGGTGCCTACAGTGGGTTTAAGAACTTCTTAGATCAAACAAGGAGTAGAGTTAATAACTTCACTCCATCCCACCCAACTTCTCCCAAACACCCCTTAAAAGACAAACTCTAGGTTGTTCAAGGGCCTTTTGTCTAAGATCTGTATGAGTGTAAAGTCTTGTTACCTTGAGAGAATTAAAGTGGTTAGAGATTTGCATCACATGTGTCTTCCTTTCCTTGTGTATAAATTACTTAGTCTTATGTGCTTTCTTCTGAGCGAGTTAGAGGTTGAACTAAGGAGTCCCCTAGGCCGCACAGATAACTTGACAAAATTTTTGGGGCTAAATCTTGTCCGTGACAAGTGGTTTTAGAGCTAGGTTTGCCGACATCACCTACCATTGGTGAACAGGAAACTGAGGTGTAGAGTGGTAACATGGGAAGGGAAAATGCAGTTATGCTTAAACAATTTTTTCTGGAACCTGGAAATAATCTTGTACATGATGTCAGGGAAACAACAGTTTTAAGTAGGTAAGTTGGGAAGTCATACAATTTAAAATGCTTACAAGTAAAAAAACACCCTTCTAGCTTGTTGAATTAATCTTCGGAAATATAGAATTTATTGTAGACCATTGATCACGTTAGCTTTACAGGTTTAATAGGGTCGTCCAAAATCCTTTGCCACATATAATACTCTTCATGAAAAATGAGGATAGTTCACCTATATGATTTTATGACTTAAAATCACCGTAGTACAGCTGGGTATAATTGATTTTACAATCCGTTTATTCAAGTCTCTCTCAATGATAGGATATCACGAGGAGTATTAAATAAAATAAGCAAGCACGGGGAGAAGAAAAAAATTCCTAAAGATGGAGAAACTGGAAAGGACGGACGTACAGCACTTATCATACTGGTTTGTTTTCCTTTCTCTACAATGAAGGAATGAAGTTTCTTCATATTTAATGTTTTTTCTCAAGATATTATAACTTTGTCCTATATAACTTAATCATTCTAAAGTCTAGGTTTTCCCTGTTAAATTTGTTTACCTCAAATATATTCGTAACTGAATGTTATTTTTTTAATATGTACTACTCCATAGTCATTCACTCAATTCATGAACTTTTAAGCTATAGCCATTTCTTGGTACTGCCAACAGGCTTTTGAAGGTTTGGGCGCAACAACTATGTTATATTTAGTCATTTATTAAATATGAATTTATTCAAAGGCAACCAAAATGAAATGAGTGAGAGTGCGAATGATTATTTATTTATTTACAAAAAAATAACTTCTCATTACGTTAATGAAAAAAAATAAAAGTTCAAGAAATACGAACTCAAAAAATCAAAATCAGAATAAAATAATGTCTTCTTATATTGGTTATTAATATGGTGAGTTTCATTCTAAGGTTTCTCTTTACTTTAAAAGAAATAAAAAATGAAGCTCATGGGATTGGAACTTGTTCTTTTTAGGAGTTTGGTCTTGGCTAGGCATGGGCTAGAGAGAGATGATCGAGAAGTTCCTTCTCCACTCCCCTTTTATGGGAAATGAAGCTTTTAATGACAATTTGGGTTGTGCACTTTTTTTTGGGACCTTAGAGAGAGAGAAACAATAGAGTTTCTAGAGAGCTTGAGTGTTTTTCGTGAAGGAATTGAATGATCGCTTTGTGTCACTAAACTTGTTTTGGAAAAAACAAAATACAGAGAACTACAGGATAAATAACAAAATCATTAGCATGCTTTTTAGAAGAAAGGGATAGAAGATTTCCTACCTTTTGAACACCTTCGACGTAGGAGTCATTCTTCTCCAAATCACGAACCGGTGACTTCTCCAATGAACGCAAGAACTCTTCTTCTTTGGGAACACCACCACAATAGAAACCTTGCTATTATCGGGGAAGAACCAACAAAGGAGTTGTGGGCTCTCTATTTCTTTTGGCAAGTGAGAATTGTTGATAGTGAGGAGAGTTGGAGAGGGAGAAGTTACAGAACATTTCTGTAAAAAGAAAAAGAGATCTTCAAAAACCTTCTTTCCTTCCTTTTCTTTATACGTGAAATGTGATAGAGAAGGAAAGGAAATAACTCCCCACTACATGGGAGCTATTTTAATATAATAATATTAATTAATTAAAATTAAAATTAATTTAATTATAATTTATCAAATCATATTTAATAAATAAAATAAAATAATTAACAATTAATTAATTAATTAATTAATTAAATATCTCATATTTAATTTGGATCATATTCAAATAACCTCCTCTCACATAACCTATAGTTTTATAAATGAATTTTAACCTATAGTTTTTATATGAATCTCATTCATATAATTAATATTTAGATCTCATTTAAATATTTATCTCTCTTATGATATAAAATATAACTTTTGAGTCTCATTCAAAATAAATTTTGATATTATAATGTATCTGTATACATTATGCTAATTGTATTACATACAATTAATTCCCCTTAGTAATTTGAACATTTCAAATTAAACCAAATTTTTTTATTCTTATACTAATCATTTAGGAGCTAGCAAGGGGACCTCATGGACCTATAGTTAGAAGTTTCAATGATATGAGATTAATCAATTAAACTCTTTAATTAGATTAATCAATATTCATTAACTGTAGGTCACTCCACTAAAGACTTATAGTTGCACTCTTCACATTATAGATATATTTATATGTCCATGAAATTTACTAATCAATAGTAAGTCGACCCTTCACAAATTACTCATAACTACAATCAGTAGTTATAGCAGTGAGAGGGTGATGCAAGACCACGAATCAACTCTTAAGGGAGTAATTTATCTAAGCACAGGAAGAAGTAATATCTTGTTAAGATATGTTCCTAGCTTCCTAATCAGACAAATCCCCAAAATGGTATGTTTATTGAGTTGGCGATTTGACCACTCTCACCCATATAGATCAAATGATTGCCATTATAGACAGGAGTTCATAACTCATTCAGGATCTAGGTTGAGTTACCTATAGTCATCCTATAAAATGTTAATTTTTACAATTAACAATGTTACAAAGAGAAATTAAACATTTCGCGGTCTGGTCTGATACAAACTCTTTGCATAAGATACCCCATTCACATGTCTCCACATGAACGATTATGATCAAATCGTTTGTAACACTTTACAATTTCTTTTAACAATTACAAAGTGGACCGTATTCGTAGTGTTACCAGAATAAGACACCCAATCTCATTCTTATACTACAGACCTTTTAGTTATTATTTAATCCAACCTTGTATGTCGACCACATACATGTTTAAGTTTACATAAAATAATCATAGATTCTTAGTTTATTGGATTGAGGTAATGTATAAGATAGATAAAATAATTTCTTATTTTATTCAATAAGTAAAATGTATATACAATTTACAAAACTATAAGACCCAAGAGATTTAGGACACACCAATCCCAACATTTCGTTCTATATCTGGTCCCTTAGATTTTTTTTTTTTTTTTTCTTTCTTTCTTTCTGAAAAGGAAACAAAGCTTTTCATTGACAAAATGAAAAAAGACTAATGATCAAAGTACAAGGAAACCAACATAAATAGATTTCATGTTTTTTGGGGGCCTTAGTGGCGAAGCTTTTTTTTTTTTTTTTGTTATAATTACCCGTTAGGCCTTATCTTACTTGATTGAGGGCTCATTTTGTGAACATTTTTGTTGGTTCTTGTATTTTTTCATTCCTTTCATTAAAATTTTAGTTATTCATTAAGGGAAAAAGGGTCTTTTACCAAGATAATTATATTAAGATATTAAGATGTGTAAAAGTATACCATGTTTGTTAAAATGTGTTAATTAATACATCCTTGCTTTCTATACCACAATTTTTTAATTGATGGTGCATCACTGCGTTTGTGTGATGTTTGATATCATTCGTATCCACGTCGTTGTCCTATGATTATGTCCCTTCGTGATTAAGACTCACTAAAATTTAAATGATTTTAGTTGATTGTTTGGGTAGGAATTTACTCATGTCAATTGGACCCATCTGTTTTGTTTTTGCAGTTACAATCACTTGATTCTCTCGGGCATTTGGAGATCACTGTGCAAGAGATGCAAGTTTCAAAGGTTAGCCGGGAGGGCTTAAATTAGCGATAGTATCTGTTGCCTTGCAATGTGCTCTTTAAATTGCCAAATATTATGCAAAACTGGTGCAAGTATATACAACTATAAGTACTAGGCAGCGAGTAAATCCTCTTTTCAGTACTGTAGAAGTCAAAAAAGTCCAAAAAGAATTAGCATTCTCATTTAGATTATCCTCATCAGTAGCCTTGACACAGCCGATTTGCTCCAAACGAAACTTTCTTCTTCATTCCTTATGCCCTCACTATGTTCCCTTTGCCAAGCGGATGGGGTGCTGATTTTCATAATGTTTTTTGGGATTTCTTAATTCATTAGACTAAATCATTTTTTATGGTCATCACAGTCATGGCCTTAATTTCAGAATTATGGTTGGAACAAAATCAGTATTTTTATTTTTTTGTTGAAGACAGGCACACTTTCCTTGGGTCGTTCATTTTGAATTATCTTATCTCAAGGCTTCTTCATGGTGTTCTCTTTCCAACATCTTTAGTGGTCTCGTGGTTTGTTGTTTCATTTTTCTCTCTTCAAGAGGTTGTATCTTTTGGGCGATAATCTTTTTTAATTTTTTTCCAATGAAAAGTTTCAATGCTTGTTTTATATAAATCTAAATATAAATACAAATCTAAGAGACTACTTTGAAGACCACAACCTAGAAGAATAAGCTTAGAGGGAAGAGAGAAAAGACAAAACAAGAAACTTTTTTTAGTTTTATTAAATTTTTTTGGATCAGTGGTCACTTCCCAGAAGCAACAAGAGTCCGTTTTGGTTGTGTTTTAATTGATTGTTATAATTCCACTTGCTCTTCTGCTACCACTTTGAGTAACTGGAATTTTGTTGCAGAAGGATCCTTCGCTCGTTGAGGCTGAGAATGTACTCTCTGAATGTTTTTCTGCTTATCAAAAGGTAACAAGTTCCAATGGTATTTCTTTTTTCTGTCCAATGAGCCTGACATCAATGACCACATGGGTGATACATTATTTCTGTTGAAAGAATATTATTTACTAACAGTCTTTCATTTGTGATCTATCTAACCTGATAATTTTTGATATCTCAGTAGTTCTCACTTTTCATACACTTACTGTCACCATTATCATTATTATTATTTTGCTTTTAAAATCTAGCCAATATATTGAGATCATTATCAAATTGACTTAGAAAACTAAAAGAAGCAGTTTTTAAATGTTTGTTTTTGTTTTTGAAATTTGGCTAAGAATTCAACTCTTGTACTGAAGAAAGATGCAATCATGGTAAGAAATTGAGAATAATTAGGCTTAATTTTAAAAAATCAAAAGCCAAAAACGAAATGGTTACATAACGGGACCTTGATCATTGAATACCGTAAAAAGGCTTCCATTTCCTGCAATTGTTAGAGACATTTCCAAGAGGTTTTTGTTTCTCAGCTAAAATTCTTTTATGATCATATTTTATTAGAATCTTTATTGGAACCTATAAATTCTTTTCTATTCATATATTTTATTGGACTTTGCTCAGGGGAATGGTATTGCACCTCTTTTATTAGACTATGTGAAATAAATAGTCGAACTTATCATAGTTCAGTTGGTCAAAGCTTTACTTATCTTTCTAAACGTTGAGATTCAAATTCCTCTCTTTTTGAACTTAAAAAGTGATAAAAAGATATGGAGATATGTTAGGATGCATTTGTGTGGAATGTGTTTTTTCAAGTGATTTCATAGAACTTCATGTATTTTCCACTCATATCTCATACTTTTGTTCTTAAAATACGAACCACCCTGAGTTGACTTAATGATTGATAAAGGCCCATCGTTTAATAAAGAGCTTGAAGAGAACAAGTCAAGCTTCGATTTAAGAGCTTGCAAATTTCTTTGACAATTAAATATAGTAGGTTAGGTGGTTGTCTCATACGAACAATTGAGGTGTGCAAGTTGGACAATACACTCGTAAATATCAAAAGGAGAAAGAGATCCAAAGACCGTTTCAAATCAGTGGCTATTTCAAAAATAATGGAATTATTTATCACTTTCAAACCATGTCATAATGCATAAACATTGGCACTTTTATGATTGGACATGTTCTAAAGATCTTGAACTAAATTATGAATGGTAACAATTATGCAGTTCAAAGGTTCAACTTTCGACACTCCTGAAGTCAAGGCCGAGTACTGTACATGTTTGAAGCGTCTCTCAAGCCTGTTTAGCGATGGCGAAACGAGTAAGCAAATGAGAAGAGTCAGTTCACAAGATCTGCAGGATGAAATCAGTCGCCTTGAGGTTGAATTGTCTCCATACAGAAAACAGAAAAGCTAA

mRNA sequence

ATGCAGGAAGGTGGTTTAGGTGAGTCAATTCTCTGCATCAGAAGATTGCGATATCTTGCTAAGGGATGGAATTCTCTGGAAACTATAAATTCTGCTGACAGCTTGGCCTCAACGCTATATGCCAATGGATGCCTGAAGGAAGCACAAGAGCTTCTTGAGAGGTGTCTTGATGCACGGAAAAGTTTACTTCCTGAGGACCACATCCAGTTACAATCACTTGATTCTCTCGGGCATTTGGAGATCACTGTGCAAGAGATGCAAGTTTCAAAGAAGGATCCTTCGCTCGTTGAGGCTGAGAATGTACTCTCTGAATGTTTTTCTGCTTATCAAAAGTTCAAAGGTTCAACTTTCGACACTCCTGAAGTCAAGGCCGAGTACTGTACATGTTTGAAGCGTCTCTCAAGCCTGTTTAGCGATGGCGAAACGAGTAAGCAAATGAGAAGAGTCAGTTCACAAGATCTGCAGGATGAAATCAGTCGCCTTGAGGTTGAATTGTCTCCATACAGAAAACAGAAAAGCTAA

Coding sequence (CDS)

ATGCAGGAAGGTGGTTTAGGTGAGTCAATTCTCTGCATCAGAAGATTGCGATATCTTGCTAAGGGATGGAATTCTCTGGAAACTATAAATTCTGCTGACAGCTTGGCCTCAACGCTATATGCCAATGGATGCCTGAAGGAAGCACAAGAGCTTCTTGAGAGGTGTCTTGATGCACGGAAAAGTTTACTTCCTGAGGACCACATCCAGTTACAATCACTTGATTCTCTCGGGCATTTGGAGATCACTGTGCAAGAGATGCAAGTTTCAAAGAAGGATCCTTCGCTCGTTGAGGCTGAGAATGTACTCTCTGAATGTTTTTCTGCTTATCAAAAGTTCAAAGGTTCAACTTTCGACACTCCTGAAGTCAAGGCCGAGTACTGTACATGTTTGAAGCGTCTCTCAAGCCTGTTTAGCGATGGCGAAACGAGTAAGCAAATGAGAAGAGTCAGTTCACAAGATCTGCAGGATGAAATCAGTCGCCTTGAGGTTGAATTGTCTCCATACAGAAAACAGAAAAGCTAA

Protein sequence

MQEGGLGESILCIRRLRYLAKGWNSLETINSADSLASTLYANGCLKEAQELLERCLDARKSLLPEDHIQLQSLDSLGHLEITVQEMQVSKKDPSLVEAENVLSECFSAYQKFKGSTFDTPEVKAEYCTCLKRLSSLFSDGETSKQMRRVSSQDLQDEISRLEVELSPYRKQKS

Homology

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BLAST of Cla013137 vs. TrEMBL
Match: A0A0A0L903_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G188320 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.6e-42
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 1


Query: 57  DARKSLLPEDHIQLQSLDSLGHLEITVQEMQVSKKDPSLVEAENVLSECFSAYQKFKGST 116
           D R +L+    I LQSLDSLG+LEIT+QEMQVSKKDP LVEAEN+LSECFS YQKFKGST
Sbjct: 192 DGRTALI----ILLQSLDSLGNLEITMQEMQVSKKDPLLVEAENLLSECFSTYQKFKGST 251

Query: 117 FDTPEVKAEYCTCLKRLSSLFSDGETSKQMRRVSSQDLQDEISRLEVELSPYRKQKS 174
           FDTPEVKAEYC CLKRLSSL SDG+T KQ  RVS +DL+DEISRL+VELSPYRKQKS
Sbjct: 252 FDTPEVKAEYCACLKRLSSLISDGKTRKQTGRVSLEDLKDEISRLQVELSPYRKQKS 304

[Close]

BLAST of Cla013137 vs. TrEMBL
Match: A0A0A0L903_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G188320 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.7e-25
Identity = 65/96 (67.71%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAK--------------------------GWNSLETINSADS 60
           ++EGGLGESILCIRRLRYLAK                          GWNSLETINSAD 
Sbjct: 28  LEEGGLGESILCIRRLRYLAKMHMKSNNLLETENVQRKILHIMELSKGWNSLETINSADG 87

Query: 61  LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQL 71
           LASTLYANGCLKEAQELLERCLDARKSLLP+DHIQ+
Sbjct: 88  LASTLYANGCLKEAQELLERCLDARKSLLPKDHIQI 123

HSP 2 Score: 112.8 bits (281), Expect = 4.1e-22
Identity = 56/136 (41.18%), Postives = 90/136 (66.18%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAKGWNSLETINSADSLASTLYANGCLKEAQELLERCLDARK 60
           ++E GLG+S  C++R+RYL+ GW+SL+T N+A+ L  TL   G LKE++ELLERCL+ RK
Sbjct: 255 LEEAGLGDSPTCLQRMRYLSTGWDSLDTTNAAELLTLTLQTIGKLKESEELLERCLEVRK 314

Query: 61  SLLPEDHIQLQSLDSLGHLEITVQEMQVSKKDPSLVEAENVLSECFSAYQKFKGSTFDTP 120
            +L EDH+QLQ+L+  G +E  ++ M ++  +  L   E  +++C S Y++       + 
Sbjct: 315 KILSEDHLQLQALEVAGLVESGMKNM-LAPGEQDLYPVEQAVNKCISLYKEPHLRKLVSK 374

Query: 121 EVKAEYCTCLKRLSSL 137
            +K EY  CL+RL+ +
Sbjct: 375 ALKNEYIRCLRRLTGI 389

[Close]

BLAST of Cla013137 vs. TrEMBL
Match: A0A0D9W343_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.1e-22
Identity = 56/136 (41.18%), Postives = 90/136 (66.18%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAKGWNSLETINSADSLASTLYANGCLKEAQELLERCLDARK 60
           ++E GLG+S  C++R+RYL+ GW+SL+T N+A+ L  TL   G LKE++ELLERCL+ RK
Sbjct: 251 LEEAGLGDSPTCLQRMRYLSTGWDSLDTTNAAELLTLTLQTIGKLKESEELLERCLEVRK 310

Query: 61  SLLPEDHIQLQSLDSLGHLEITVQEMQVSKKDPSLVEAENVLSECFSAYQKFKGSTFDTP 120
            +L EDH+QLQ+L+  G +E  ++ M ++  +  L   E  +++C S Y++       + 
Sbjct: 311 KILSEDHLQLQALEVAGLVESGMKNM-LAPGEQDLYPVEQAVNKCISLYKEPHLRKLVSK 370

Query: 121 EVKAEYCTCLKRLSSL 137
            +K EY  CL+RL+ +
Sbjct: 371 ALKNEYIRCLRRLTGI 385

[Close]

BLAST of Cla013137 vs. TrEMBL
Match: W9RKQ7_9ROSA (Kinesin light chain OS=Morus notabilis GN=L484_004955 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.2e-19
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAKGWNSLETINSADSLASTLYANGCLKEAQELLERCLDARK 60
           ++E G  ESIL +RRLRYLA+GW+SLETIN+A+ LA TL A G LKEAQELLERCLDARK
Sbjct: 167 LEERGQEESILYLRRLRYLAQGWSSLETINAAEGLALTLQAAGNLKEAQELLERCLDARK 226

Query: 61  SLLPEDHIQL 71
           +LLP+DHIQ+
Sbjct: 227 TLLPDDHIQI 236

[Close]

BLAST of Cla013137 vs. TrEMBL
Match: W9RKQ7_9ROSA (Kinesin light chain OS=Morus notabilis GN=L484_004955 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-18
Identity = 72/186 (38.71%), Postives = 106/186 (56.99%), Query Frame = 1


Query: 6   LGESILCIRRLRYLAKGWNSLETINSADSLASTLYA----NGCLKEAQELLERCLDARKS 65
           +GE++L I RL  L    N L   ++++++A    A    N  ++ AQ  L++ +  R  
Sbjct: 236 IGENMLHIARLGMLKA--NRLRKTDTSEAIAELDRAKDRLNDSIRIAQIFLDKLMKQRGK 295

Query: 66  LLPEDH-----------IQLQSLDSLGHLEITVQEM-QVSKKDPSLVEAENVLSECFSAY 125
              E             I LQS D+LG LEIT +E+ +++    S+VEAEN L  C SAY
Sbjct: 296 RQSESEGAKKNGREALVILLQSFDALGFLEITKKELRELTDGHSSVVEAENALLRCISAY 355

Query: 126 QKF--KGSTFDTPEVKAEYCTCLKRLSSLFSDGET--SKQMRRVSSQDLQDEISRLEVEL 172
           ++F  + S  D  EVKAEY +CLK L+SL SD  T  ++Q R ++ QD+ +EI RLE E+
Sbjct: 356 KRFGTERSISDAREVKAEYLSCLKHLASLISDNATDRTQQSRGINLQDINEEIKRLEAEV 415

HSP 2 Score: 97.1 bits (240), Expect = 2.3e-17
Identity = 52/96 (54.17%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLA--------------------------KGWNSLETINSADS 60
           ++EGG GESI CIRRLRYLA                          KGWNSL+T+ +A+ 
Sbjct: 280 LEEGGQGESIACIRRLRYLAQMYIKSNRTAEAENVQRKILHIVELSKGWNSLDTVIAAER 339

Query: 61  LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQL 71
           LA TL ++G LKEAQELLERCLDARK+LLPEDH+Q+
Sbjct: 340 LALTLQSSGSLKEAQELLERCLDARKTLLPEDHLQI 375

[Close]

BLAST of Cla013137 vs. NCBI nr
Match: gi|778679902|ref|XP_011651211.1| (PREDICTED: uncharacterized protein LOC101207905 isoform X2 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 6.6e-42
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 1


Query: 57  DARKSLLPEDHIQLQSLDSLGHLEITVQEMQVSKKDPSLVEAENVLSECFSAYQKFKGST 116
           D R +L+    I LQSLDSLG+LEIT+QEMQVSKKDP LVEAEN+LSECFS YQKFKGST
Sbjct: 346 DGRTALI----ILLQSLDSLGNLEITMQEMQVSKKDPLLVEAENLLSECFSTYQKFKGST 405

Query: 117 FDTPEVKAEYCTCLKRLSSLFSDGETSKQMRRVSSQDLQDEISRLEVELSPYRKQKS 174
           FDTPEVKAEYC CLKRLSSL SDG+T KQ  RVS +DL+DEISRL+VELSPYRKQKS
Sbjct: 406 FDTPEVKAEYCACLKRLSSLISDGKTRKQTGRVSLEDLKDEISRLQVELSPYRKQKS 458

[Close]

BLAST of Cla013137 vs. NCBI nr
Match: gi|778679902|ref|XP_011651211.1| (PREDICTED: uncharacterized protein LOC101207905 isoform X2 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 9.6e-25
Identity = 65/96 (67.71%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAK--------------------------GWNSLETINSADS 60
           ++EGGLGESILCIRRLRYLAK                          GWNSLETINSAD 
Sbjct: 182 LEEGGLGESILCIRRLRYLAKMHMKSNNLLETENVQRKILHIMELSKGWNSLETINSADG 241

Query: 61  LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQL 71
           LASTLYANGCLKEAQELLERCLDARKSLLP+DHIQ+
Sbjct: 242 LASTLYANGCLKEAQELLERCLDARKSLLPKDHIQI 277

HSP 2 Score: 179.1 bits (453), Expect = 6.6e-42
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 1


Query: 57  DARKSLLPEDHIQLQSLDSLGHLEITVQEMQVSKKDPSLVEAENVLSECFSAYQKFKGST 116
           D R +L+    I LQSLDSLG+LEIT+QEMQVSKKDP LVEAEN+LSECFS YQKFKGST
Sbjct: 192 DGRTALI----ILLQSLDSLGNLEITMQEMQVSKKDPLLVEAENLLSECFSTYQKFKGST 251

Query: 117 FDTPEVKAEYCTCLKRLSSLFSDGETSKQMRRVSSQDLQDEISRLEVELSPYRKQKS 174
           FDTPEVKAEYC CLKRLSSL SDG+T KQ  RVS +DL+DEISRL+VELSPYRKQKS
Sbjct: 252 FDTPEVKAEYCACLKRLSSLISDGKTRKQTGRVSLEDLKDEISRLQVELSPYRKQKS 304

[Close]

BLAST of Cla013137 vs. NCBI nr
Match: gi|700202326|gb|KGN57459.1| (hypothetical protein Csa_3G188320 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 9.6e-25
Identity = 65/96 (67.71%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAK--------------------------GWNSLETINSADS 60
           ++EGGLGESILCIRRLRYLAK                          GWNSLETINSAD 
Sbjct: 28  LEEGGLGESILCIRRLRYLAKMHMKSNNLLETENVQRKILHIMELSKGWNSLETINSADG 87

Query: 61  LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQL 71
           LASTLYANGCLKEAQELLERCLDARKSLLP+DHIQ+
Sbjct: 88  LASTLYANGCLKEAQELLERCLDARKSLLPKDHIQI 123

HSP 2 Score: 179.1 bits (453), Expect = 6.6e-42
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 1


Query: 57  DARKSLLPEDHIQLQSLDSLGHLEITVQEMQVSKKDPSLVEAENVLSECFSAYQKFKGST 116
           D R +L+    I LQSLDSLG+LEIT+QEMQVSKKDP LVEAEN+LSECFS YQKFKGST
Sbjct: 442 DGRTALI----ILLQSLDSLGNLEITMQEMQVSKKDPLLVEAENLLSECFSTYQKFKGST 501

Query: 117 FDTPEVKAEYCTCLKRLSSLFSDGETSKQMRRVSSQDLQDEISRLEVELSPYRKQKS 174
           FDTPEVKAEYC CLKRLSSL SDG+T KQ  RVS +DL+DEISRL+VELSPYRKQKS
Sbjct: 502 FDTPEVKAEYCACLKRLSSLISDGKTRKQTGRVSLEDLKDEISRLQVELSPYRKQKS 554

[Close]

BLAST of Cla013137 vs. NCBI nr
Match: gi|778679900|ref|XP_011651210.1| (PREDICTED: uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 9.6e-25
Identity = 65/96 (67.71%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAK--------------------------GWNSLETINSADS 60
           ++EGGLGESILCIRRLRYLAK                          GWNSLETINSAD 
Sbjct: 278 LEEGGLGESILCIRRLRYLAKMHMKSNNLLETENVQRKILHIMELSKGWNSLETINSADG 337

Query: 61  LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQL 71
           LASTLYANGCLKEAQELLERCLDARKSLLP+DHIQ+
Sbjct: 338 LASTLYANGCLKEAQELLERCLDARKSLLPKDHIQI 373

HSP 2 Score: 123.6 bits (309), Expect = 3.3e-25
Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAK--------------------------GWNSLETINSADS 60
           ++EGGLGESILCIRRLRYLAK                          GWNSLETINSAD 
Sbjct: 278 LEEGGLGESILCIRRLRYLAKMHMKSNNLLEAENVQRKILHIMELSKGWNSLETINSADG 337

Query: 61  LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQL 71
           LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQ+
Sbjct: 338 LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQI 373

[Close]

BLAST of Cla013137 vs. NCBI nr
Match: gi|659114571|ref|XP_008457120.1| (PREDICTED: kinesin light chain 3-like isoform X3 [Cucumis melo])

HSP 1 Score: 123.2 bits (308), Expect = 4.3e-25
Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 1   MQEGGLGESILCIRRLRYLAK--------------------------GWNSLETINSADS 60
           ++EGGLGESILCIRRLRYLAK                          GWNSLETINSAD 
Sbjct: 278 LEEGGLGESILCIRRLRYLAKMHMKSNNLLEAENVQRKILHIMELSKGWNSLETINSADG 337

Query: 61  LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQL 71
           LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQ+
Sbjct: 338 LASTLYANGCLKEAQELLERCLDARKSLLPEDHIQV 373

The following BLAST results are available for this feature:

BLAST of Cla013137 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L903_CUCSA	4.6e-42	79.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G188320 PE=4 SV=1	[more]
A0A0A0L903_CUCSA	6.7e-25	67.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G188320 PE=4 SV=1	[more]
A0A0D9W343_9ORYZ	4.1e-22	41.18	Uncharacterized protein OS=Leersia perrieri PE=4 SV=1	[more]
W9RKQ7_9ROSA	4.2e-19	72.86	Kinesin light chain OS=Morus notabilis GN=L484_004955 PE=4 SV=1	[more]
W9RKQ7_9ROSA	2.7e-18	38.71	Kinesin light chain OS=Morus notabilis GN=L484_004955 PE=4 SV=1	[more]

BLAST of Cla013137 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679902\|ref\|XP_011651211.1\|	6.6e-42	79.49	PREDICTED: uncharacterized protein LOC101207905 isoform X2 [Cucumis sativus]	[more]
gi\|778679902\|ref\|XP_011651211.1\|	9.6e-25	67.71	PREDICTED: uncharacterized protein LOC101207905 isoform X2 [Cucumis sativus]	[more]
gi\|700202326\|gb\|KGN57459.1\|	9.6e-25	67.71	hypothetical protein Csa_3G188320 [Cucumis sativus]	[more]
gi\|778679900\|ref\|XP_011651210.1\|	9.6e-25	67.71	PREDICTED: uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus]	[more]
gi\|659114571\|ref\|XP_008457120.1\|	4.3e-25	68.75	PREDICTED: kinesin light chain 3-like isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013137	Cla013137.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19959	KINESIN LIGHT CHAIN	coord: 1..70 score: 6.9
None	No IPR available	PANTHER	PTHR19959:SF159	TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN	coord: 1..70 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla013137	Cla97C05G092990	Watermelon (97103) v2	wmwmbB206
Cla013137	Csa3G188320	Cucumber (Chinese Long) v2	cuwmB243
Cla013137	ClCG05G010650	Watermelon (Charleston Gray)	wcgwmB286
Cla013137	CSPI03G17760	Wild cucumber (PI 183967)	cpiwmB242
Cla013137	Cucsa.108570	Cucumber (Gy14) v1	cgywmB153
Cla013137	CmaCh01G003370	Cucurbita maxima (Rimu)	cmawmB434
Cla013137	CmoCh01G003530	Cucurbita moschata (Rifu)	cmowmB427
Cla013137	Lsi05G002730	Bottle gourd (USVL1VR-Ls)	lsiwmB361
Cla013137	Cp4.1LG02g16650	Cucurbita pepo (Zucchini)	cpewmB568
Cla013137	CsGy3G017730	Cucumber (Gy14) v2	cgybwmB229
Cla013137	MELO3C031718.2	Melon (DHL92) v3.6.1	medwmB448
Cla013137	Carg07427	Silver-seed gourd	carwmB0760
Cla013137	CsaV3_3G017830	Cucumber (Chinese Long) v3	cucwmB252
Cla013137	Bhi01G001319	Wax gourd	wgowmB202

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013137	Cucurbita maxima (Rimu)	cmawmB243
Cla013137	Cucurbita moschata (Rifu)	cmowmB232
Cla013137	Melon (DHL92) v3.5.1	mewmB461
Cla013137	Cucurbita pepo (Zucchini)	cpewmB614
Cla013137	Silver-seed gourd	carwmB0166