Cla013085 (gene) Watermelon (97103) v1

Overview
NameCla013085
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 10697960 .. 10698151 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTGGAACTAGGCATTGGAAGGAGGAAGAAGAGGAAGATCAAGGACGATTGGGGTGGATTCCTGGTCAAATTTGTGGTGCAATCGAAGCTGGAACTGAAGGTTGTTCTAGTGTCGCGCAGTCTGAACAAAGTCTGGTGTTTGGTGAATAGCAAACGGCAGAAATCAAGTTTGAACCTAAAAGTTTGA

mRNA sequence

ATGGCTCTGGAACTAGGCATTGGAAGGAGGAAGAAGAGGAAGATCAAGGACGATTGGGGTGGATTCCTGGTCAAATTTGTGGTGCAATCGAAGCTGGAACTGAAGGTTGTTCTAGTGTCGCGCAGTCTGAACAAAGTCTGGTGTTTGGTGAATAGCAAACGGCAGAAATCAAGTTTGAACCTAAAAGTTTGA

Coding sequence (CDS)

ATGGCTCTGGAACTAGGCATTGGAAGGAGGAAGAAGAGGAAGATCAAGGACGATTGGGGTGGATTCCTGGTCAAATTTGTGGTGCAATCGAAGCTGGAACTGAAGGTTGTTCTAGTGTCGCGCAGTCTGAACAAAGTCTGGTGTTTGGTGAATAGCAAACGGCAGAAATCAAGTTTGAACCTAAAAGTTTGA

Protein sequence

MALELGIGRRKKRKIKDDWGGFLVKFVVQSKLELKVVLVSRSLNKVWCLVNSKRQKSSLNLKV
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006412 translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU36103watermelon unigene v2 vs TrEMBLtranscribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013085Cla013085.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU36103WMU36103transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla013085Cucurbita pepo (Zucchini)cpewmB228
Cla013085Cucurbita pepo (Zucchini)cpewmB261
Cla013085Cucurbita pepo (Zucchini)cpewmB433
Cla013085Cucurbita pepo (Zucchini)cpewmB656
Cla013085Bottle gourd (USVL1VR-Ls)lsiwmB255
Cla013085Bottle gourd (USVL1VR-Ls)lsiwmB361
Cla013085Cucumber (Gy14) v2cgybwmB229
Cla013085Cucumber (Gy14) v2cgybwmB553
Cla013085Melon (DHL92) v3.6.1medwmB226
Cla013085Melon (DHL92) v3.6.1medwmB448
Cla013085Melon (DHL92) v3.6.1medwmB557
Cla013085Silver-seed gourdcarwmB0197
Cla013085Silver-seed gourdcarwmB0288
Cla013085Silver-seed gourdcarwmB0371
Cla013085Cucumber (Chinese Long) v3cucwmB252
Cla013085Cucumber (Chinese Long) v3cucwmB618
Cla013085Watermelon (97103) v2wmwmbB202
Cla013085Watermelon (97103) v2wmwmbB206
Cla013085Wax gourdwgowmB202
Cla013085Wax gourdwgowmB271
Cla013085Watermelon (97103) v1wmwmB131
Cla013085Cucumber (Gy14) v1cgywmB423
Cla013085Cucumber (Gy14) v1cgywmB462
Cla013085Cucurbita maxima (Rimu)cmawmB114
Cla013085Cucurbita maxima (Rimu)cmawmB317
Cla013085Cucurbita maxima (Rimu)cmawmB496
Cla013085Cucurbita maxima (Rimu)cmawmB703
Cla013085Cucurbita moschata (Rifu)cmowmB098
Cla013085Cucurbita moschata (Rifu)cmowmB311
Cla013085Cucurbita moschata (Rifu)cmowmB490
Cla013085Cucurbita moschata (Rifu)cmowmB699
Cla013085Melon (DHL92) v3.5.1mewmB231
Cla013085Melon (DHL92) v3.5.1mewmB461
Cla013085Melon (DHL92) v3.5.1mewmB568
Cla013085Watermelon (Charleston Gray)wcgwmB135
Cla013085Watermelon (Charleston Gray)wcgwmB190
Cla013085Watermelon (Charleston Gray)wcgwmB286
Cla013085Cucumber (Chinese Long) v2cuwmB243
Cla013085Cucumber (Chinese Long) v2cuwmB590