Cla012865 (gene) Watermelon (97103) v1

Overview
NameCla012865
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRetrotransposon protein (AHRD V1 ***- E5GCB5_CUCME)
LocationChr9 : 19753535 .. 19754284 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGGTCAGTTGAGATTTGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTCAAGAGGGAGATTTTCGATCTTTGGGTTCGGGTAAGATTCTAGAAAAAAAAATTTACCAGTACGTGTTAAATATGTAAATATTAATAATGTGTACGTGTATAAATGTAGAGTCATCCTAGCGCGAAGGGGATGTGGAACAAGTCGTTCTCCCATTACGATGACCTCTCTACCATCTTTGGGAAAGATAGAGTTGTAGGACAATCAAGTGAAGACCCGCACATGATGGCGAGTAATGCATTTAGAGAGTTTGAAGATGGGATTCGACTTGGATCGCAGGACTGCCACACAGTTGAGTTTCGCCAAACAGATTCACCATTAAATCCGAATGGAATGGATGAAGAGACAGCAAAGCAATCTACAAGTAGAGCGACACTTGCCGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCTATCATTCCAAGCTGAAATGATCGACAACATGATATCGACTATTGAGATGCAGAACACGCACATGGATAAAGTTGCATCGTGGCAAAAGGAGAAGTATGAGCTGGTGTTTGGTCATCAGAAGGAAGTAGTAAACGCTATATACAGTATTGACGGCATGACTGAGGATGACCAGGTGACCCTTATTGACATACTTGTCACAGACATTCAAAAGACAGATTGCTTCCTTGCAGTACCAGAACACGCACGGAAGAGGTATTGTCTTCGTCTACTAGGAAGAGACATGTAA

mRNA sequence

ATGTTAGGTCAGTTGAGATTTGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTCAAGAGGGAGATTTTCGATCTTTGGGTTCGGAGTCATCCTAGCGCGAAGGGGATGTGGAACAAGTCGTTCTCCCATTACGATGACCTCTCTACCATCTTTGGGAAAGATAGAGTTGTAGGACAATCAAGTGAAGACCCGCACATGATGGCGAGTAATGCATTTAGAGAGTTTGAAGATGGGATTCGACTTGGATCGCAGGACTGCCACACAGTTGAGTTTCGCCAAACAGATTCACCATTAAATCCGAATGGAATGGATGAAGAGACAGCAAAGCAATCTACAAGTAGAGCGACACTTGCCGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCTATCATTCCAAGCTGAAATGATCGACAACATGATATCGACTATTGAGATGCAGAACACGCACATGGATAAAGTTGCATCGTGGCAAAAGGAGAAGTATGAGCTGGTGTTTGGTCATCAGAAGGAAGTAGTAAACGCTATATACAGTATTGACGGCATGACTGAGGATGACCAGGTGACCCTTATTGACATACTTGTCACAGACATTCAAAAGACAGATTGCTTCCTTGCAGTACCAGAACACGCACGGAAGAGGTATTGTCTTCGTCTACTAGGAAGAGACATGTAA

Coding sequence (CDS)

ATGTTAGGTCAGTTGAGATTTGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTCAAGAGGGAGATTTTCGATCTTTGGGTTCGGAGTCATCCTAGCGCGAAGGGGATGTGGAACAAGTCGTTCTCCCATTACGATGACCTCTCTACCATCTTTGGGAAAGATAGAGTTGTAGGACAATCAAGTGAAGACCCGCACATGATGGCGAGTAATGCATTTAGAGAGTTTGAAGATGGGATTCGACTTGGATCGCAGGACTGCCACACAGTTGAGTTTCGCCAAACAGATTCACCATTAAATCCGAATGGAATGGATGAAGAGACAGCAAAGCAATCTACAAGTAGAGCGACACTTGCCGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCTATCATTCCAAGCTGAAATGATCGACAACATGATATCGACTATTGAGATGCAGAACACGCACATGGATAAAGTTGCATCGTGGCAAAAGGAGAAGTATGAGCTGGTGTTTGGTCATCAGAAGGAAGTAGTAAACGCTATATACAGTATTGACGGCATGACTGAGGATGACCAGGTGACCCTTATTGACATACTTGTCACAGACATTCAAAAGACAGATTGCTTCCTTGCAGTACCAGAACACGCACGGAAGAGGTATTGTCTTCGTCTACTAGGAAGAGACATGTAA

Protein sequence

MLGQLRFGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHMMASNAFREFEDGIRLGSQDCHTVEFRQTDSPLNPNGMDEETAKQSTSRATLAESSRGSKRKRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNAIYSIDGMTEDDQVTLIDILVTDIQKTDCFLAVPEHARKRYCLRLLGRDM
Homology
[Close]
BLAST of Cla012865 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 72/214 (33.64%), Postives = 112/214 (52.34%), Query Frame = 1 

Query: 7   FGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHM 66
           FGWN+E KC+  ++E+FD W  SHP+AKG+ NKSF HYD+LS +FGKDR  G  +E    
Sbjct: 446 FGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFAD 505

Query: 67  MASNAFREFEDGIRLGSQDCHTVEFRQTDSPLNPNG-MDEETAKQSTSRATLAESSRGSK 126
           + SN    ++ G      D            ++P+  M+  TA+ S  R      S GSK
Sbjct: 506 IGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERR----NVSSGSK 565

Query: 127 RKRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNAIYSIDGMTEDD 186
           RKR     +  D + + IE  N  + ++A W   + +     ++E+V  + +I  +T  D
Sbjct: 566 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 625

Query: 187 QVTLIDILVTDIQKTDCFLAVPEHARKRYCLRLL 220
           +  L+ IL+ ++     FL VP+H +  YC  +L
Sbjct: 626 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL 653

[Close]
BLAST of Cla012865 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.9e-17
Identity = 66/222 (29.73%), Postives = 114/222 (51.35%), Query Frame = 1 

Query: 7   FGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHM 66
           FGWN+E KC+  ++E+FD WVRS P+AKG+ N  F +YD+L+ +FG+DR  G+ +E    
Sbjct: 409 FGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFAD 468

Query: 67  MASN----AFREFEDGIRLGSQDCHTVEFRQTDSPLNPNGMDEETAKQSTSRATLAES-S 126
           + SN     +  F+ G   G++D   V  R  D       + ++      SRA+  ++ S
Sbjct: 469 VGSNEPGGGYDRFDMGD--GNEDFPPVYSRGVDI------LQDDVRASRPSRASEGKTGS 528

Query: 127 RGSKRKRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNAIYSIDGM 186
            GSKRKR S +   ++ +   ++  N  + ++A W           + E    +  +  +
Sbjct: 529 SGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPEL 588

Query: 187 TEDDQVTLIDILVTDIQKTDCFLAVPEHARKRYCLRLLGRDM 224
           T  D+  L   L++ +     F+ +PE  R+ +C R+L RD+
Sbjct: 589 TSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFC-RVLLRDI 621

[Close]
BLAST of Cla012865 vs. TrEMBL
Match: A0A0A0M0S6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665930 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.6e-17
Identity = 58/205 (28.29%), Postives = 103/205 (50.24%), Query Frame = 1 

Query: 6   RFGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPH 65
           RFGWNEE KC++V++ +FD WV+ H +A+G+ NKSFS++ DL  + G+DR +G   + P 
Sbjct: 66  RFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPV 125

Query: 66  MMASNAFREFEDGIRLGSQDCHTVEFRQTDSPLNPNGMDEETAKQSTSRAT---LAESSR 125
            M     ++ E       +D   +     D P  P+G++  + K  +S  T   L   S 
Sbjct: 126 EMDPQTTKDIE-------KDDIGINLEDFDIP-KPHGLELPSVKNMSSTPTSMILDARSY 185

Query: 126 GSKRKRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNAIYSIDGMT 185
              RKR S+      +M  T +     + K+ + ++ K ++     K++   + +I GM 
Sbjct: 186 RQSRKRRSYSCTFCASMRETFK----EIGKIVAMEERKMKIESSLHKQLYVELQTIHGMD 245

Query: 186 EDDQVTLIDILVTDIQKTDCFLAVP 208
            D+ + +++ L+ +      FL  P
Sbjct: 246 VDNCLIVVESLLPNPTMLHTFLDYP 258

[Close]
BLAST of Cla012865 vs. TrEMBL
Match: A0A161XV48_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018898 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-15
Identity = 64/214 (29.91%), Postives = 110/214 (51.40%), Query Frame = 1 

Query: 7   FGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHM 66
           FGWNE  K +  ++ IF+ W++SHP+AKG+ NKSF +YD+LS +FGKDR  G+  E P  
Sbjct: 101 FGWNELDKSITCEKSIFEDWLKSHPNAKGLRNKSFPYYDELSQVFGKDRANGECVESPAD 160

Query: 67  MASNAFREFEDGIRLGSQDCHTVEFRQTDSPLNPNGMDEETAKQSTSRATLAESSRGSKR 126
                  E E+      Q  H  E   T+  ++P  +D ++A  ++      ++      
Sbjct: 161 AVEEIANEEEN---TPQQSEHQKE--NTEDEVSPR-IDVQSADTNSRANKRLKADSLEIV 220

Query: 127 KRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNA-IYSIDGMTEDD 186
           K L+F  + I N++ T    N ++ K+ S    ++E     ++ +VN+ +  + G+T ++
Sbjct: 221 KELTFGLQKISNVMET---GNENIAKLTSC--FQHESDGAKKRSLVNSELMKVAGLTAEE 280

Query: 187 QVTLIDILVTDIQKTDCFLAVPEHARKRYCLRLL 220
            +     +  D  +TD F ++PE  R  Y   LL
Sbjct: 281 IIKAGRKIALDPLETDYFFSLPEDFRSTYVQALL 303

[Close]
BLAST of Cla012865 vs. TrEMBL
Match: A0A161WV79_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011368 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-15
Identity = 65/214 (30.37%), Postives = 110/214 (51.40%), Query Frame = 1 

Query: 7   FGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHM 66
           FGWNE  K +   + IF+ W++SHP+AKG+ NKSF +YD+LS +FGKDR  G+  E P  
Sbjct: 32  FGWNELDKSITCDKSIFEDWLKSHPNAKGLRNKSFPYYDELSQVFGKDRANGECVESPAD 91

Query: 67  MASNAFREFEDGIRLGSQDCHTVEFRQTDSPLNPNGMDEETAKQSTSRATLAESSRGSKR 126
            A     E E+      Q  H  E   T+  ++P  +D ++A  ++      ++      
Sbjct: 92  AAEEIANEEEN---TPQQSEHRKE--NTEDEVSPR-IDVQSADTNSRANKRLKADSLEIV 151

Query: 127 KRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNA-IYSIDGMTEDD 186
           K L+F  + I N++ T    N ++ K+ S    ++E     ++ +VN+ +  + G+T ++
Sbjct: 152 KELTFGLQKISNVMET---GNENIAKLTSC--FQHESDGAKKRGLVNSELMKVAGLTAEE 211

Query: 187 QVTLIDILVTDIQKTDCFLAVPEHARKRYCLRLL 220
            +     +  D  +TD F ++PE  R  Y   LL
Sbjct: 212 IIKAGRKIALDPLETDHFFSLPEDFRSTYVQALL 234

[Close]
BLAST of Cla012865 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29
Identity = 78/214 (36.45%), Postives = 116/214 (54.21%), Query Frame = 1 

Query: 7   FGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHM 66
           FGWNEEF+C+  +R++FD W++SHP+AKG+ +KSF +YDDLS +FGKDR  G  SE    
Sbjct: 92  FGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPN 151

Query: 67  MASNAFREFEDGIRLG-SQDCHTVEFRQTDSPLNPNGMDEETAKQSTSRATLAESSRGSK 126
           + SN    F D I LG S D            ++P+ M    A Q++ R      S  SK
Sbjct: 152 VGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASER---RNCSSVSK 211

Query: 127 RKRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNAIYSIDGMTEDD 186
           RKR S + E ++ + S +E  N  +  +A W KEK  +    + +VV  +  I  +   D
Sbjct: 212 RKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQD 271

Query: 187 QVTLIDILVTDIQKTDCFLAVPEHARKRYCLRLL 220
           +  L+ IL   ++  + FL++P   +  YC  LL
Sbjct: 272 RAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]
BLAST of Cla012865 vs. NCBI nr
Match: gi|659071532|ref|XP_008460440.1| (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo])

HSP 1 Score: 120.6 bits (301), Expect = 3.6e-24
Identity = 67/206 (32.52%), Postives = 113/206 (54.85%), Query Frame = 1 

Query: 6   RFGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPH 65
           RFGWNEE KC++ ++ +FD WV+ HP+A+G+ NKSF ++ DL  +FG+DR  G   + P 
Sbjct: 7   RFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTPI 66

Query: 66  MMASNAFREFEDGIRLGSQDCHTVEFRQTDSPLNPNGMD----EETAKQSTSRATLAESS 125
            M     R+ E       +D   +     D P NP+G++    E+ +   TS A    SS
Sbjct: 67  EMGLQIARDTE-------EDDMDINLEDFDIP-NPHGLEPPSGEDMSSTPTSMAHDVGSS 126

Query: 126 RGSKRKRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNAIYSIDGM 185
           + SK++R S+  +++D   +++   +  + K+A+WQ+EK E+     K +   + +I GM
Sbjct: 127 KPSKKRR-SYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGM 186

Query: 186 TEDDQVTLIDILVTDIQKTDCFLAVP 208
             DD + +++ L+ D      FL  P
Sbjct: 187 DVDDCLIVVESLLPDPIMLHTFLDYP 203

[Close]
BLAST of Cla012865 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-23
Identity = 72/214 (33.64%), Postives = 112/214 (52.34%), Query Frame = 1 

Query: 7   FGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHM 66
           FGWN+E KC+  ++E+FD W  SHP+AKG+ NKSF HYD+LS +FGKDR  G  +E    
Sbjct: 446 FGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFAD 505

Query: 67  MASNAFREFEDGIRLGSQDCHTVEFRQTDSPLNPNG-MDEETAKQSTSRATLAESSRGSK 126
           + SN    ++ G      D            ++P+  M+  TA+ S  R      S GSK
Sbjct: 506 IGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERR----NVSSGSK 565

Query: 127 RKRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNAIYSIDGMTEDD 186
           RKR     +  D + + IE  N  + ++A W   + +     ++E+V  + +I  +T  D
Sbjct: 566 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 625

Query: 187 QVTLIDILVTDIQKTDCFLAVPEHARKRYCLRLL 220
           +  L+ IL+ ++     FL VP+H +  YC  +L
Sbjct: 626 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL 653

[Close]
BLAST of Cla012865 vs. NCBI nr
Match: gi|659123900|ref|XP_008461893.1| (PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 7.0e-20
Identity = 69/214 (32.24%), Postives = 110/214 (51.40%), Query Frame = 1 

Query: 7   FGWNEEFKCVQVKREIFDLWVRSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHM 66
           FGWN+E KC+  ++E+FD W  SHP+AKG+ NKSF HYD+LS +F KD   G  +E    
Sbjct: 40  FGWNDEQKCIVAEKEVFDDW--SHPAAKGLLNKSFPHYDELSYVFSKDHATGGRAESFAD 99

Query: 67  MASNAFREFEDGIRLGSQDCHTVEFRQTDSPLNPNG-MDEETAKQSTSRATLAESSRGSK 126
           + SN    ++      + D            ++P+  M   TA+ S  R      S GSK
Sbjct: 100 VGSNDPTGYDAFAANAASDTDFQPMYSRGLNMSPDELMGTRTARVSEGRYV----SSGSK 159

Query: 127 RKRLSFQAEMIDNMISTIEMQNTHMDKVASWQKEKYELVFGHQKEVVNAIYSIDGMTEDD 186
           +KR     +  D + + IE  N  ++++A W   + +     ++EVV  + +I  +T  D
Sbjct: 160 QKRGGSTIDSGDILRTAIEYGNEQLNRIAEWHVLQRQDATQTRQEVVRQLEAIPELTLMD 219

Query: 187 QVTLIDILVTDIQKTDCFLAVPEHARKRYCLRLL 220
           +  L+ IL+ ++     FL VP++  K YC  +L
Sbjct: 220 RCRLMRILIHNVNDMKAFLEVPDN-MKPYCSIIL 246

[Close]
BLAST of Cla012865 vs. NCBI nr
Match: gi|659113923|ref|XP_008456820.1| (PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-19
Identity = 65/192 (33.85%), Postives = 92/192 (47.92%), Query Frame = 1 

Query: 28  RSHPSAKGMWNKSFSHYDDLSTIFGKDRVVGQSSEDPHMMASNAFREFEDGIRLGSQDCH 87
           RSHP+AKG+ +KSF +YDDLS +FG D   G  SE      SN    F DG+ LG  D H
Sbjct: 70  RSHPAAKGLLHKSFPYYDDLSYVFGNDGATGAHSETFADGGSNVSNMFNDGVPLG--DSH 129

Query: 88  TVEFRQTDSPLNPNGMDEETAKQSTSRATLAESSRGSKRKRLSFQAEMIDNMISTIEMQN 147
             +     S      +DE    ++   +     S GSKRKR S   EM++ + S  E  N
Sbjct: 130 NQDILTIYSQGVHMSLDEIFGIRAGQASERRNYSSGSKRKRGSKHYEMVEVISSATEFGN 189

Query: 148 THMDKVASWQKEKYELVFGHQKEVVNAIYSIDGMTEDDQVTLIDILVTDIQKTDCFLAVP 207
             +  +  W KEK       + EVV  +  I  +   D+  L+ IL   ++  + FL++P
Sbjct: 190 DQLKTITDWPKEKRATEVELRTEVVKQLQDIPQLRSQDRAKLMQILFRSVEAIEGFLSIP 249

Query: 208 EHARKRYCLRLL 220
              +  YC  LL
Sbjct: 250 TKLKLEYCNILL 259

The following BLAST results are available for this feature:
BLAST of Cla012865 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB5_CUCME1.2e-2333.64Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBB2_CUCME3.9e-1729.73Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0M0S6_CUCSA6.6e-1728.29Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665930 PE=4 SV=1[more]
A0A161XV48_DAUCA2.1e-1529.91Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018898 PE=4 SV=1[more]
A0A161WV79_DAUCA2.8e-1530.37Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011368 PE=4 SV=1[more]
BLAST of Cla012865 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082641|ref|XP_008441954.1|3.7e-2936.45PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|659071532|ref|XP_008460440.1|3.6e-2432.52PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo][more]
gi|307136287|gb|ADN34114.1|1.8e-2333.64retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659123900|ref|XP_008461893.1|7.0e-2032.24PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo][more]
gi|659113923|ref|XP_008456820.1|5.9e-1933.85PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012865Cla012865.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 1..219
score: 8.9
NoneNo IPR availablePANTHERPTHR31704:SF16SUBFAMILY NOT NAMEDcoord: 1..219
score: 8.9