Cla012830 (gene) Watermelon (97103) v1

Overview
NameCla012830
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionBidirectional sugar transporter N3 (AHRD V1 *-*- NOD3_MEDTR); contains Interpro domain(s) IPR018179 RAG1-activating protein 1 homologue IPR004316 RAG1-activating protein-1-related
LocationChr7 : 27124017 .. 27124927 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCTTTGGAGCTTGCTCGAACTGTTATTGGTATCATAGGTAAGTAAAAATCATTACTTTCCTTAAAAAGAAAAAAAAGAAAGAAAATCTTATTTTCTCTCGTTTCACTCCTTTCTTTACACCTTGGTTTGTTTTGTGTAGGAAATATTATCGCACTTTTCTTGTTCTTGTCTCCATTGTAAGTACCCTTTTCTGTTCTCCACATGTTTCTTTAGCTTGCTAGCTTTTTATCTTCTAAAACCATGTTCTTCTACTCATATTCTTCTCTTTTCTGTCTTTTATTATTCTCTAAATCACTATTTAGATGTTGTTTGATTGAGATATTCTTGTAACATAGTTTTTTGCGAAGTAGTTAGAAACGTATTGTTAAGATCGAACTGGATTGACTTTGCATAAGAAAATATTTTAAAGTTGTCTTAGAAATTCAATCCAAACAAACCATAAACTTAATAAAATAGCTTTTAAATTCAACTTGACTTAGAAGATATCTTACTATAGATGGAATCGTGAGAAACACAAAAATTACGAGAATAATAACCTCGTAACTTTTCTAAAACATCAAAAACCCTAATTGATCTTGTATTTATGTTTAATTACAATGGATTTATTTTTCAGGCCAACCTTCGTCACAATATGGAAGAAGGGATCGGTTGAGCAGTTCTCGCCAATCCCGTACCTCGCAACGCTCGTGAACTGCCTAGTTTGGGTGTTGTATGGGCTGCCGGTGGTGCATCCTGGAAGCATTCTAGTGATCACCATTAACGCAGCTGGAACCCTAATCGAGCTGGTTTACATAATCCTCTTCTTATCGGAAGAAGCGGGTGAAAGTTATCCTTGTGCTTCTTGTGGAGCTCGTCTTCATCACGCTTTTGAGCCTTCTGGTTCTTTTCATCTTTCACACTCATAG

mRNA sequence

ATGGTTTCTTTGGAGCTTGCTCGAACTGTTATTGGTATCATAGGAAATATTATCGCACTTTTCTTGTTCTTGTCTCCATTGCCAACCTTCGTCACAATATGGAAGAAGGGATCGGTTGAGCAGTTCTCGCCAATCCCGTACCTCGCAACGCTCGTGAACTGCCTAGTTTGGGTGTTGTATGGGCTGCCGGTGGTGCATCCTGGAAGCATTCTAGTGATCACCATTAACGCAGCTGGAACCCTAATCGAGCTGGTTTACATAATCCTCTTCTTATCGGAAGAAGCGGGTGAAAGTTATCCTTGTGCTTCTTGTGGAGCTCGTCTTCATCACGCTTTTGAGCCTTCTGGTTCTTTTCATCTTTCACACTCATAG

Coding sequence (CDS)

ATGGTTTCTTTGGAGCTTGCTCGAACTGTTATTGGTATCATAGGAAATATTATCGCACTTTTCTTGTTCTTGTCTCCATTGCCAACCTTCGTCACAATATGGAAGAAGGGATCGGTTGAGCAGTTCTCGCCAATCCCGTACCTCGCAACGCTCGTGAACTGCCTAGTTTGGGTGTTGTATGGGCTGCCGGTGGTGCATCCTGGAAGCATTCTAGTGATCACCATTAACGCAGCTGGAACCCTAATCGAGCTGGTTTACATAATCCTCTTCTTATCGGAAGAAGCGGGTGAAAGTTATCCTTGTGCTTCTTGTGGAGCTCGTCTTCATCACGCTTTTGAGCCTTCTGGTTCTTTTCATCTTTCACACTCATAG

Protein sequence

MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLYGLPVVHPGSILVITINAAGTLIELVYIILFLSEEAGESYPCASCGARLHHAFEPSGSFHLSHS
Homology
[Close]
BLAST of Cla012830 vs. Swiss-Prot
Match: SWET4_ORYSJ (Bidirectional sugar transporter SWEET4 OS=Oryza sativa subsp. japonica GN=SWEET4 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 8.3e-31
Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVS +  RT IG++GN  AL LFLSP+PTF+ IWKKGSVEQ+S +PY+ATL+NC++WVLY
Sbjct: 1  MVSPDTIRTAIGVVGNGTALVLFLSPVPTFIRIWKKGSVEQYSAVPYVATLLNCMMWVLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILFLSEEAG 97
          GLP VHP S+LVITIN  G  IEL YI LFL+   G
Sbjct: 61 GLPAVHPHSMLVITINGTGMAIELTYIALFLAFSLG 96

[Close]
BLAST of Cla012830 vs. Swiss-Prot
Match: SWET4_ORYSI (Bidirectional sugar transporter SWEET4 OS=Oryza sativa subsp. indica GN=SWEET4 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 8.3e-31
Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVS +  RT IG++GN  AL LFLSP+PTF+ IWKKGSVEQ+S +PY+ATL+NC++WVLY
Sbjct: 1  MVSPDTIRTAIGVVGNGTALVLFLSPVPTFIRIWKKGSVEQYSAVPYVATLLNCMMWVLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILFLSEEAG 97
          GLP VHP S+LVITIN  G  IEL YI LFL+   G
Sbjct: 61 GLPAVHPHSMLVITINGTGMAIELTYIALFLAFSLG 96

[Close]
BLAST of Cla012830 vs. Swiss-Prot
Match: SWET7_ARATH (Bidirectional sugar transporter SWEET7 OS=Arabidopsis thaliana GN=SWEET7 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-29
Identity = 62/87 (71.26%), Postives = 69/87 (79.31%), Query Frame = 1 

Query: 4  LELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLYGLP 63
          L L R ++GIIGN IAL LFLSP PTFV I KK SVE++SPIPYLATL+NCLVWVLYGLP
Sbjct: 6  LNLLRKIVGIIGNFIALCLFLSPTPTFVRIVKKKSVEEYSPIPYLATLINCLVWVLYGLP 65

Query: 64 VVHPGSILVITINAAGTLIELVYIILF 91
           VHP S LVITIN  G LIE+V++ +F
Sbjct: 66 TVHPDSTLVITINGTGILIEIVFLTIF 92

[Close]
BLAST of Cla012830 vs. Swiss-Prot
Match: SWET4_ARATH (Bidirectional sugar transporter SWEET4 OS=Arabidopsis thaliana GN=SWEET4 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-26
Identity = 54/90 (60.00%), Postives = 69/90 (76.67%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MV+  +AR + GI GN+I+LFLFLSP+PTF+TI+KK  VE++   PYLAT++NC +WV Y
Sbjct: 1  MVNATVARNIAGICGNVISLFLFLSPIPTFITIYKKKKVEEYKADPYLATVLNCALWVFY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILF 91
          GLP+V P S+LVITIN  G  IELVY+ +F
Sbjct: 61 GLPMVQPDSLLVITINGTGLAIELVYLAIF 90

[Close]
BLAST of Cla012830 vs. Swiss-Prot
Match: SWET5_ORYSJ (Bidirectional sugar transporter SWEET5 OS=Oryza sativa subsp. japonica GN=SWEET5 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.1e-26
Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 1 

Query: 5  ELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLYGLPV 64
          +  R V+GIIGN+I+  LFLSPLPTFVTI KK  VE+F P PYLAT +NC +WV YGLP 
Sbjct: 6  DAVRNVVGIIGNLISFGLFLSPLPTFVTIVKKKDVEEFVPDPYLATFLNCALWVFYGLPF 65

Query: 65 VHPGSILVITINAAGTLIELVYIILFLS 93
          +HP SILV+TIN  G LIE+ Y+ ++ +
Sbjct: 66 IHPNSILVVTINGTGLLIEIAYLAIYFA 93

[Close]
BLAST of Cla012830 vs. TrEMBL
Match: A0A0A0KV06_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_4G054810 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-40
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVSL LARTVIGIIGNIIALFLFLSPLPTFVTIWK+GSVEQ+SPIPYLATLVNCLVWVLY
Sbjct: 1  MVSLVLARTVIGIIGNIIALFLFLSPLPTFVTIWKRGSVEQYSPIPYLATLVNCLVWVLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILF 91
          GLPVVHPGSILVITINAAGTLIELVYIILF
Sbjct: 61 GLPVVHPGSILVITINAAGTLIELVYIILF 90

[Close]
BLAST of Cla012830 vs. TrEMBL
Match: A0A059CHE1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01702 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-34
Identity = 69/91 (75.82%), Postives = 83/91 (91.21%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVS + ART +G++GN IALFLFLSP+PTF+ IWKKGSVEQ+SP+PYLATL+NC+VWVLY
Sbjct: 1  MVSADAARTAVGVLGNAIALFLFLSPMPTFIRIWKKGSVEQYSPVPYLATLINCIVWVLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILFL 92
          GLP+VHP S LV+TIN AGTLIE+VYI+LFL
Sbjct: 61 GLPMVHPHSTLVVTINGAGTLIEVVYILLFL 91

[Close]
BLAST of Cla012830 vs. TrEMBL
Match: D7TVL5_VITVI (Bidirectional sugar transporter SWEET OS=Vitis vinifera GN=VIT_02s0025g02080 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-33
Identity = 67/91 (73.63%), Postives = 82/91 (90.11%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          M S E+ART +GI+GNIIALFLFLSP+PTF++IWKKGSVEQ+SP+PYLAT +NC+VWVLY
Sbjct: 1  MSSTEVARTAVGILGNIIALFLFLSPVPTFISIWKKGSVEQYSPVPYLATFINCMVWVLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILFL 92
          GLP+VHP S LV+TIN  G +IELVY+ILF+
Sbjct: 61 GLPMVHPHSTLVVTINGTGFVIELVYLILFI 91

[Close]
BLAST of Cla012830 vs. TrEMBL
Match: A0A0A0KNR4_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_5G148830 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.7e-33
Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVS +  RT++GI GN I+LFLFLSP+PTF+ IWKKGSVEQ+SP+PYLATL+NC+VW LY
Sbjct: 1  MVSPDAIRTILGIFGNAISLFLFLSPVPTFIQIWKKGSVEQYSPVPYLATLINCMVWTLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILFLSEEAGE 98
          GLP+V+PGSILV+TIN  G +IELVYIILFL    G+
Sbjct: 61 GLPMVNPGSILVVTINGTGVVIELVYIILFLIYSDGK 97

[Close]
BLAST of Cla012830 vs. TrEMBL
Match: W9RWJ9_9ROSA (Bidirectional sugar transporter SWEET OS=Morus notabilis GN=L484_007829 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.7e-33
Identity = 69/90 (76.67%), Postives = 80/90 (88.89%), Query Frame = 1 

Query: 2  VSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLYG 61
          +S + ARTV+GIIGN+I+LFLFLSP+PTFV IWKK SVEQ+S +PYLATLVNCLVW LYG
Sbjct: 3  ISADTARTVVGIIGNVISLFLFLSPVPTFVRIWKKKSVEQYSAVPYLATLVNCLVWTLYG 62

Query: 62 LPVVHPGSILVITINAAGTLIELVYIILFL 92
          LP+VHPGSILV+TIN +GT IE  YIILFL
Sbjct: 63 LPMVHPGSILVVTINGSGTAIECAYIILFL 92

[Close]
BLAST of Cla012830 vs. NCBI nr
Match: gi|449462513|ref|XP_004148985.1| (PREDICTED: bidirectional sugar transporter SWEET7 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 2.0e-40
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVSL LARTVIGIIGNIIALFLFLSPLPTFVTIWK+GSVEQ+SPIPYLATLVNCLVWVLY
Sbjct: 1  MVSLVLARTVIGIIGNIIALFLFLSPLPTFVTIWKRGSVEQYSPIPYLATLVNCLVWVLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILF 91
          GLPVVHPGSILVITINAAGTLIELVYIILF
Sbjct: 61 GLPVVHPGSILVITINAAGTLIELVYIILF 90

[Close]
BLAST of Cla012830 vs. NCBI nr
Match: gi|659102029|ref|XP_008451915.1| (PREDICTED: bidirectional sugar transporter SWEET4-like [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-40
Identity = 87/90 (96.67%), Postives = 88/90 (97.78%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVSL LARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQ+SPIPYLATLVNCLVWVLY
Sbjct: 1  MVSLVLARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQYSPIPYLATLVNCLVWVLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILF 91
          GLPVVHPGSILVITINA GTLIELVYIILF
Sbjct: 61 GLPVVHPGSILVITINATGTLIELVYIILF 90

[Close]
BLAST of Cla012830 vs. NCBI nr
Match: gi|629112380|gb|KCW77340.1| (hypothetical protein EUGRSUZ_D01702 [Eucalyptus grandis])

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-34
Identity = 69/91 (75.82%), Postives = 83/91 (91.21%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVS + ART +G++GN IALFLFLSP+PTF+ IWKKGSVEQ+SP+PYLATL+NC+VWVLY
Sbjct: 1  MVSADAARTAVGVLGNAIALFLFLSPMPTFIRIWKKGSVEQYSPVPYLATLINCIVWVLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILFL 92
          GLP+VHP S LV+TIN AGTLIE+VYI+LFL
Sbjct: 61 GLPMVHPHSTLVVTINGAGTLIEVVYILLFL 91

[Close]
BLAST of Cla012830 vs. NCBI nr
Match: gi|659074060|ref|XP_008437400.1| (PREDICTED: bidirectional sugar transporter SWEET4-like [Cucumis melo])

HSP 1 Score: 153.3 bits (386), Expect = 2.8e-34
Identity = 69/97 (71.13%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVS +  RT++GI GN+I+LFLFLSP+PTF+ IWKKGSVEQ+SP+PYLATL+NC+VW LY
Sbjct: 1  MVSPDAIRTILGIFGNVISLFLFLSPVPTFIQIWKKGSVEQYSPVPYLATLINCMVWTLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILFLSEEAGE 98
          GLP+VHPGSILV+TIN +G +IELVYIILFL    G+
Sbjct: 61 GLPMVHPGSILVVTINGSGVVIELVYIILFLIYSDGK 97

[Close]
BLAST of Cla012830 vs. NCBI nr
Match: gi|470129162|ref|XP_004300494.1| (PREDICTED: bidirectional sugar transporter SWEET4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-33
Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = 1 

Query: 1  MVSLELARTVIGIIGNIIALFLFLSPLPTFVTIWKKGSVEQFSPIPYLATLVNCLVWVLY 60
          MVS + ARTV+GIIGN+I+LFLFLSP+PTFV IWKKGSVEQ+SP+PYLATL+NC+ W LY
Sbjct: 1  MVSADAARTVVGIIGNLISLFLFLSPVPTFVKIWKKGSVEQYSPVPYLATLINCMAWTLY 60

Query: 61 GLPVVHPGSILVITINAAGTLIELVYIILF 91
          GLP+VHP S LV TIN +GT+IE+VYIILF
Sbjct: 61 GLPIVHPNSTLVWTINGSGTIIEVVYIILF 90

The following BLAST results are available for this feature:
BLAST of Cla012830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SWET4_ORYSJ8.3e-3165.63Bidirectional sugar transporter SWEET4 OS=Oryza sativa subsp. japonica GN=SWEET4... [more]
SWET4_ORYSI8.3e-3165.63Bidirectional sugar transporter SWEET4 OS=Oryza sativa subsp. indica GN=SWEET4 P... [more]
SWET7_ARATH2.7e-2971.26Bidirectional sugar transporter SWEET7 OS=Arabidopsis thaliana GN=SWEET7 PE=1 SV... [more]
SWET4_ARATH1.6e-2660.00Bidirectional sugar transporter SWEET4 OS=Arabidopsis thaliana GN=SWEET4 PE=1 SV... [more]
SWET5_ORYSJ8.1e-2660.23Bidirectional sugar transporter SWEET5 OS=Oryza sativa subsp. japonica GN=SWEET5... [more]
BLAST of Cla012830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV06_CUCSA1.4e-4096.67Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_4G054810 PE=3 SV... [more]
A0A059CHE1_EUCGR1.1e-3475.82Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01702 PE=3 SV=1[more]
D7TVL5_VITVI2.1e-3373.63Bidirectional sugar transporter SWEET OS=Vitis vinifera GN=VIT_02s0025g02080 PE=... [more]
A0A0A0KNR4_CUCSA4.7e-3370.10Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_5G148830 PE=3 SV... [more]
W9RWJ9_9ROSA4.7e-3376.67Bidirectional sugar transporter SWEET OS=Morus notabilis GN=L484_007829 PE=3 SV=... [more]
BLAST of Cla012830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462513|ref|XP_004148985.1|2.0e-4096.67PREDICTED: bidirectional sugar transporter SWEET7 [Cucumis sativus][more]
gi|659102029|ref|XP_008451915.1|2.6e-4096.67PREDICTED: bidirectional sugar transporter SWEET4-like [Cucumis melo][more]
gi|629112380|gb|KCW77340.1|1.6e-3475.82hypothetical protein EUGRSUZ_D01702 [Eucalyptus grandis][more]
gi|659074060|ref|XP_008437400.1|2.8e-3471.13PREDICTED: bidirectional sugar transporter SWEET4-like [Cucumis melo][more]
gi|470129162|ref|XP_004300494.1|2.3e-3375.56PREDICTED: bidirectional sugar transporter SWEET4 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004316SWEET_sugar_transpr
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008643 carbohydrate transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU16450watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU37238watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU53737watermelon EST collection version 2.0transcribed_cluster
WMU76022watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012830Cla012830.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU37238WMU37238transcribed_cluster
WMU16450WMU16450transcribed_cluster
WMU53737WMU53737transcribed_cluster
WMU76022WMU76022transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004316SWEET sugar transporterPFAMPF03083MtN3_slvcoord: 10..91
score: 2.6
NoneNo IPR availablePANTHERPTHR10791RAG1-ACTIVATING PROTEIN 1coord: 1..91
score: 1.3
NoneNo IPR availablePANTHERPTHR10791:SF41BIDIRECTIONAL SUGAR TRANSPORTER SWEET6-RELATEDcoord: 1..91
score: 1.3