Cla012817 (gene) Watermelon (97103) v1

NameCla012817
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr7 : 26935446 .. 26936045 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAATTGTTCTGTGAAAGGAATGGCGGTCGATTGCGAAAAACCCATCAGAATTTTAACCGATTCCGGCAACATAATCAACTTCCATGGCCCTAAACAAGTCCATCAAATCCTCAACAACTATCCTCCCGGCGTCTATGGCGTTTTCCGCAGCCCCAATCTCTCTTCTCCGTTACCCATCTCCGAACCCCTCCACGCCGGAAAATCCTACTTTCTCCTCCCGCTTTCCCGACCCGCCGATGAAGTTCAAACCGGCGACGGCAGGCCCGAGGCGGCGGAGGATCTGGGAACTGGGTCCGGTCTGGAAGTGCTTCCGGCGGGTGGCAACGGCGTTTGGAGAGTCAAATTGGTGATCGATACGAAGCAGTTGGAGGAAATTTTGGCGGAGGAAGGGAACACGGAGGCTTTGATTGAGAGGATGAGGGCGGCGGCGGCGACGGCCGCGGCGGTTCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGACGTGGGGGAATTGGTTCAAGCTTTTTCCAATTGATGTTGGAAACAATTTTAATAAATCACAAATCAAGGATTTTGATTCTGGAAATGGGTGTTTATATGCAACATAA

mRNA sequence

ATGGGGAATTGTTCTGTGAAAGGAATGGCGGTCGATTGCGAAAAACCCATCAGAATTTTAACCGATTCCGGCAACATAATCAACTTCCATGGCCCTAAACAAGTCCATCAAATCCTCAACAACTATCCTCCCGGCGTCTATGGCGTTTTCCGCAGCCCCAATCTCTCTTCTCCGTTACCCATCTCCGAACCCCTCCACGCCGGAAAATCCTACTTTCTCCTCCCGCTTTCCCGACCCGCCGATGAAGTTCAAACCGGCGACGGCAGGCCCGAGGCGGCGGAGGATCTGGGAACTGGGTCCGGTCTGGAAGTGCTTCCGGCGGGTGGCAACGGCGTTTGGAGAGTCAAATTGGTGATCGATACGAAGCAGTTGGAGGAAATTTTGGCGGAGGAAGGGAACACGGAGGCTTTGATTGAGAGGATGAGGGCGGCGGCGGCGACGGCCGCGGCGGTTCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGACGTGGGGGAATTGGTTCAAGCTTTTTCCAATTGATGTTGGAAACAATTTTAATAAATCACAAATCAAGGATTTTGATTCTGGAAATGGGTGTTTATATGCAACATAA

Coding sequence (CDS)

ATGGGGAATTGTTCTGTGAAAGGAATGGCGGTCGATTGCGAAAAACCCATCAGAATTTTAACCGATTCCGGCAACATAATCAACTTCCATGGCCCTAAACAAGTCCATCAAATCCTCAACAACTATCCTCCCGGCGTCTATGGCGTTTTCCGCAGCCCCAATCTCTCTTCTCCGTTACCCATCTCCGAACCCCTCCACGCCGGAAAATCCTACTTTCTCCTCCCGCTTTCCCGACCCGCCGATGAAGTTCAAACCGGCGACGGCAGGCCCGAGGCGGCGGAGGATCTGGGAACTGGGTCCGGTCTGGAAGTGCTTCCGGCGGGTGGCAACGGCGTTTGGAGAGTCAAATTGGTGATCGATACGAAGCAGTTGGAGGAAATTTTGGCGGAGGAAGGGAACACGGAGGCTTTGATTGAGAGGATGAGGGCGGCGGCGGCGACGGCCGCGGCGGTTCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGACGTGGGGGAATTGGTTCAAGCTTTTTCCAATTGATGTTGGAAACAATTTTAATAAATCACAAATCAAGGATTTTGATTCTGGAAATGGGTGTTTATATGCAACATAA

Protein sequence

MGNCSVKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPLPISEPLHAGKSYFLLPLSRPADEVQTGDGRPEAAEDLGTGSGLEVLPAGGNGVWRVKLVIDTKQLEEILAEEGNTEALIERMRAAAATAAAVQSPRRGKIGGWKPTWGNWFKLFPIDVGNNFNKSQIKDFDSGNGCLYAT
BLAST of Cla012817 vs. TrEMBL
Match: A0A0A0KYF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052720 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.1e-83
Identity = 155/190 (81.58%), Postives = 172/190 (90.53%), Query Frame = 1

Query: 1   MGNCSVKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPLP 60
           MGNCS+KGMAVDCEKPIRILTDSG+IINFHGPKQVHQILNNYPPG+YGVFR PNLSSPLP
Sbjct: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76

Query: 61  ISEPLHAGKSYFLLPLSRPADEVQTGDGRPEAAEDLGTGSGLEVLPAGGNGVWRVKLVID 120
           +SEPL AGKSYFLLPLS+  ++ ++    P  ++D+G+ SGLEVLPAGGNGVWRVKLVID
Sbjct: 77  VSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVID 136

Query: 121 TKQLEEILAEEGNTEALIERMRAAAATAAAVQSPRRGKIGGWKPTWGNWFKLFPIDVGNN 180
           TKQL EILAEEGNTEALIERMRAAAAT AAVQSPRRGKIGGWKP WGNWFK FPIDVGN+
Sbjct: 137 TKQLGEILAEEGNTEALIERMRAAAAT-AAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNS 196

Query: 181 FNKSQIKDFD 191
            NK+Q+K F+
Sbjct: 197 -NKAQMKVFN 204

BLAST of Cla012817 vs. TrEMBL
Match: M5WC07_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020983mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-33
Identity = 102/204 (50.00%), Postives = 128/204 (62.75%), Query Frame = 1

Query: 1   MGNCS-VKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPL 60
           MGNCS +KG + +C K IR+LTDSG ++ F GPK   +IL ++P   +G+F+    S PL
Sbjct: 1   MGNCSSLKGTSGECPKSIRVLTDSGVVLQFKGPKLASEILTDFPG--HGIFQQGKASLPL 60

Query: 61  PISEPLHAGKSYFLLPLSRPADEVQTGDG---RPEAA------------------EDLGT 120
           P  E L +G+ YFLLPL R  D++   +G   + EAA                  E+L  
Sbjct: 61  PEQELLVSGQ-YFLLPL-REEDQLVCENGVIEKLEAAAAEAEPVKKSFGAGSDFVENLAN 120

Query: 121 GSG-LEVLPAGGNGVWRVKLVIDTKQLEEILAEEGNTEALIERMR-AAAATAAAVQSPRR 179
           GS  LEVLP+GG+GVWRVKLVIDTKQLEEIL+E+G TEALIE MR AA ATA    +PR+
Sbjct: 121 GSSALEVLPSGGDGVWRVKLVIDTKQLEEILSEQGITEALIETMRMAATATAGMPSTPRQ 180

BLAST of Cla012817 vs. TrEMBL
Match: V4SXB1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023315mg PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-33
Identity = 94/201 (46.77%), Postives = 119/201 (59.20%), Query Frame = 1

Query: 1   MGNCSVKGMAV--DCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSP 60
           MGNCS+KG+    DC   IR+LTDSG I+ F  PK   ++L NYP   YG+F     SSP
Sbjct: 1   MGNCSLKGIVDTNDCPNFIRVLTDSGRILEFTSPKLAREVLENYPG--YGIFPRGQASSP 60

Query: 61  LPISEPLHAGKSYFLLPLSRP---ADEVQTGDGRPEA----------------------A 120
           L   E L +G  Y+LLPL +     D+V     + E                        
Sbjct: 61  LADHESLVSGLFYYLLPLGKDHKLCDDVVRHRKQEERHKKLEAECMELMDPPKMSSADFV 120

Query: 121 EDLGTGSGLEVLPAGGNGVWRVKLVIDTKQLEEILAEEGNTEALIERMRAAAATAAAVQS 172
           E+L TGS LEVLP+ GNGVW+VKL I+TKQLEEIL+E+ NTEALIE+MR AA++AA++ +
Sbjct: 121 ENLATGSALEVLPSHGNGVWKVKLAINTKQLEEILSEQVNTEALIEKMRMAASSAASL-T 180

BLAST of Cla012817 vs. TrEMBL
Match: A0A0S3QXB0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G041800 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.7e-33
Identity = 85/179 (47.49%), Postives = 108/179 (60.34%), Query Frame = 1

Query: 1   MGNCSVKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPLP 60
           MGNCS+KG   +C   IR+++DSG I+ F  PK V Q+L +YP   YG+FR  + S PLP
Sbjct: 1   MGNCSMKGTTGECHHTIRVMSDSGAILQFKAPKTVAQVLQHYPG--YGIFRQGHASEPLP 60

Query: 61  ISEPLHAGKSYFLLPLSRP----ADEVQTGDG----RPEAA-----EDLGTGSGLEVLPA 120
             E L  G  Y+LLPL        D V   +G    R ++A     E+L  GS LEVLPA
Sbjct: 61  EQERLSYGLFYYLLPLKEGQKSCCDNVGVEEGVGGLRSKSAACDYVENLSNGSALEVLPA 120

Query: 121 GGNGVWRVKLVIDTKQLEEILAEEGNTEALIERMRAAAATAAAVQSPRRGKIGGWKPTW 167
             NGVWRVKLVI+ +QLEEIL+E+ NTEALIE+MR AA+  +     R   +  WK  W
Sbjct: 121 AKNGVWRVKLVIEQRQLEEILSEQVNTEALIEKMRMAASGCSTTSPSRSPTMSTWKVGW 177

BLAST of Cla012817 vs. TrEMBL
Match: A0A0L9TH84_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan818s004400 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.7e-33
Identity = 85/179 (47.49%), Postives = 108/179 (60.34%), Query Frame = 1

Query: 1   MGNCSVKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPLP 60
           MGNCS+KG   +C   IR+++DSG I+ F  PK V Q+L +YP   YG+FR  + S PLP
Sbjct: 1   MGNCSMKGTTGECHHTIRVMSDSGAILQFKAPKTVAQVLQHYPG--YGIFRQGHASEPLP 60

Query: 61  ISEPLHAGKSYFLLPLSRP----ADEVQTGDG----RPEAA-----EDLGTGSGLEVLPA 120
             E L  G  Y+LLPL        D V   +G    R ++A     E+L  GS LEVLPA
Sbjct: 61  EQERLSYGLFYYLLPLKEGQKSCCDNVGVEEGVGGLRSKSAACDYVENLSNGSALEVLPA 120

Query: 121 GGNGVWRVKLVIDTKQLEEILAEEGNTEALIERMRAAAATAAAVQSPRRGKIGGWKPTW 167
             NGVWRVKLVI+ +QLEEIL+E+ NTEALIE+MR AA+  +     R   +  WK  W
Sbjct: 121 AKNGVWRVKLVIEQRQLEEILSEQVNTEALIEKMRMAASGCSTTSPSRSPTMSTWKVGW 177

BLAST of Cla012817 vs. NCBI nr
Match: gi|778691105|ref|XP_011653223.1| (PREDICTED: uncharacterized protein LOC105435189 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 1.2e-82
Identity = 155/190 (81.58%), Postives = 172/190 (90.53%), Query Frame = 1

Query: 1   MGNCSVKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPLP 60
           MGNCS+KGMAVDCEKPIRILTDSG+IINFHGPKQVHQILNNYPPG+YGVFR PNLSSPLP
Sbjct: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76

Query: 61  ISEPLHAGKSYFLLPLSRPADEVQTGDGRPEAAEDLGTGSGLEVLPAGGNGVWRVKLVID 120
           +SEPL AGKSYFLLPLS+  ++ ++    P  ++D+G+ SGLEVLPAGGNGVWRVKLVID
Sbjct: 77  VSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVID 136

Query: 121 TKQLEEILAEEGNTEALIERMRAAAATAAAVQSPRRGKIGGWKPTWGNWFKLFPIDVGNN 180
           TKQL EILAEEGNTEALIERMRAAAAT AAVQSPRRGKIGGWKP WGNWFK FPIDVGN+
Sbjct: 137 TKQLGEILAEEGNTEALIERMRAAAAT-AAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNS 196

Query: 181 FNKSQIKDFD 191
            NK+Q+K F+
Sbjct: 197 -NKAQMKVFN 204

BLAST of Cla012817 vs. NCBI nr
Match: gi|659102052|ref|XP_008451927.1| (PREDICTED: uncharacterized protein LOC103493080 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 153/191 (80.10%), Postives = 169/191 (88.48%), Query Frame = 1

Query: 1   MGNCSVKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPLP 60
           MGNCS+KGMAVDC KPIRILTDSG+IINFHGPKQVHQILNNYPPG+YGVFR PNLSSPLP
Sbjct: 1   MGNCSLKGMAVDCVKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 60

Query: 61  ISEPLHAGKSYFLLPLSRPADEVQTGDGRPEAAEDLGTGSGLEVLPAGGNGVWRVKLVID 120
            SEPL AGKSYFLLPLS+P ++ ++    P  ++DLG+ SGLEVLPA GNGVWRVKLVID
Sbjct: 61  FSEPLDAGKSYFLLPLSQPTNDTESSP-PPLPSKDLGSESGLEVLPASGNGVWRVKLVID 120

Query: 121 TKQLEEILAEEGNTEALIERMRAAAATAAAVQSPRRGKIGGWKPTWGNWFKLFPIDVGNN 180
           TKQL EILAEEGNTEALIER+RAAAAT AAVQSPRRGKI GWKP WGNW K FP+D GNN
Sbjct: 121 TKQLGEILAEEGNTEALIERIRAAAAT-AAVQSPRRGKIVGWKPMWGNWLKFFPMDFGNN 180

Query: 181 FNKSQIKDFDS 192
            NK+QIK+F+S
Sbjct: 181 -NKAQIKEFNS 188

BLAST of Cla012817 vs. NCBI nr
Match: gi|1009156056|ref|XP_015896042.1| (PREDICTED: uncharacterized protein LOC107429808 [Ziziphus jujuba])

HSP 1 Score: 171.0 bits (432), Expect = 2.1e-39
Identity = 95/200 (47.50%), Postives = 123/200 (61.50%), Query Frame = 1

Query: 1   MGNCSVKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPLP 60
           MGNCS+KG++ DC   IR+LTDSG+II F GPK   ++LN+YP   YG+F     SSPLP
Sbjct: 1   MGNCSLKGVSDDCSNSIRVLTDSGSIIEFDGPKLAGEVLNDYPG--YGIFLQCKASSPLP 60

Query: 61  ISEPLHAGKSYFLLPL-------------------------SRPADEVQTGDGRPEAAED 120
             E L +GKSY+LLPL                         + P    ++     E  E 
Sbjct: 61  SHERLVSGKSYYLLPLGNKNMLCSDGVSQSLEAEWMKNVNAAEPETAKKSSYAASEFVES 120

Query: 121 LGTGSGLEVLPAGGNGVWRVKLVIDTKQLEEILAEEGNTEALIERMRAAAATAAAVQSPR 173
           L  G  LEVLP+GG+GVW+VKL+IDTKQLEEI +E+GNTEALIERMR  A++A+   +PR
Sbjct: 121 LSNGPALEVLPSGGDGVWKVKLMIDTKQLEEIFSEQGNTEALIERMRMVASSASL--TPR 180

BLAST of Cla012817 vs. NCBI nr
Match: gi|645267609|ref|XP_008239153.1| (PREDICTED: uncharacterized protein LOC103337759 [Prunus mume])

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34
Identity = 102/204 (50.00%), Postives = 128/204 (62.75%), Query Frame = 1

Query: 1   MGNCS-VKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPL 60
           MGNCS +KG + +C K IR+LTDSG ++ F GPK   +IL ++P   +G+F+    S PL
Sbjct: 1   MGNCSSLKGTSGECPKSIRVLTDSGVVLQFKGPKLASEILTDFPG--HGIFQQGKASLPL 60

Query: 61  PISEPLHAGKSYFLLPLSRPADEVQTGDG---RPEAA------------------EDLGT 120
           P  E L +G+ YFLLPL R  D++   +G   +PE A                  E+L  
Sbjct: 61  PEQELLVSGQ-YFLLPL-REEDQLVCENGVIEKPEGAAAEAEPVKKSFGAGSDFVENLAN 120

Query: 121 G-SGLEVLPAGGNGVWRVKLVIDTKQLEEILAEEGNTEALIERMR-AAAATAAAVQSPRR 179
           G S LEVLP+GG+GVWRVKLVIDTKQLEEIL+E+G TEALIE MR AA ATA    +PR+
Sbjct: 121 GSSALEVLPSGGDGVWRVKLVIDTKQLEEILSEQGITEALIETMRMAATATAGLPSTPRQ 180

BLAST of Cla012817 vs. NCBI nr
Match: gi|595851320|ref|XP_007210093.1| (hypothetical protein PRUPE_ppa020983mg [Prunus persica])

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-33
Identity = 102/204 (50.00%), Postives = 128/204 (62.75%), Query Frame = 1

Query: 1   MGNCS-VKGMAVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRSPNLSSPL 60
           MGNCS +KG + +C K IR+LTDSG ++ F GPK   +IL ++P   +G+F+    S PL
Sbjct: 1   MGNCSSLKGTSGECPKSIRVLTDSGVVLQFKGPKLASEILTDFPG--HGIFQQGKASLPL 60

Query: 61  PISEPLHAGKSYFLLPLSRPADEVQTGDG---RPEAA------------------EDLGT 120
           P  E L +G+ YFLLPL R  D++   +G   + EAA                  E+L  
Sbjct: 61  PEQELLVSGQ-YFLLPL-REEDQLVCENGVIEKLEAAAAEAEPVKKSFGAGSDFVENLAN 120

Query: 121 GSG-LEVLPAGGNGVWRVKLVIDTKQLEEILAEEGNTEALIERMR-AAAATAAAVQSPRR 179
           GS  LEVLP+GG+GVWRVKLVIDTKQLEEIL+E+G TEALIE MR AA ATA    +PR+
Sbjct: 121 GSSALEVLPSGGDGVWRVKLVIDTKQLEEILSEQGITEALIETMRMAATATAGMPSTPRQ 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KYF7_CUCSA8.1e-8381.58Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052720 PE=4 SV=1[more]
M5WC07_PRUPE1.2e-3350.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020983mg PE=4 SV=1[more]
V4SXB1_9ROSI2.0e-3346.77Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023315mg PE=4 SV=1[more]
A0A0S3QXB0_PHAAN7.7e-3347.49Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G041800 PE=... [more]
A0A0L9TH84_PHAAN7.7e-3347.49Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan818s004400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778691105|ref|XP_011653223.1|1.2e-8281.58PREDICTED: uncharacterized protein LOC105435189 [Cucumis sativus][more]
gi|659102052|ref|XP_008451927.1|1.4e-8080.10PREDICTED: uncharacterized protein LOC103493080 [Cucumis melo][more]
gi|1009156056|ref|XP_015896042.1|2.1e-3947.50PREDICTED: uncharacterized protein LOC107429808 [Ziziphus jujuba][more]
gi|645267609|ref|XP_008239153.1|3.4e-3450.00PREDICTED: uncharacterized protein LOC103337759 [Prunus mume][more]
gi|595851320|ref|XP_007210093.1|1.7e-3350.00hypothetical protein PRUPE_ppa020983mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025322DUF4228_plant
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012817Cla012817.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..164
score: 3.4
NoneNo IPR availablePANTHERPTHR33148FAMILY NOT NAMEDcoord: 2..165
score: 7.1
NoneNo IPR availablePANTHERPTHR33148:SF13SUBFAMILY NOT NAMEDcoord: 2..165
score: 7.1