Cla012783 (gene) Watermelon (97103) v1

Overview
NameCla012783
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionOs10g0499600 protein (Fragment) (AHRD V1 **-- Q0IWM5_ORYSJ)
LocationChr7 : 26469226 .. 26471224 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCAGAGTGAAAGAGGACTTCTTAACTCCTTAGATAGAAATAGTAATTTCTACAACCAAAAGAATCAGGAGCATGTCCAAGTGACTGAAGTCAAGGGTCCTACTTCAATTGATGTCTGCAATATCAACCTTTCAATTTCTGGTGAGCTGCTTAATTATGGAGCTAATATTGCTTAATACTTCTTGTGAAAGCGAAAAAAATAGCCCTCCTCATCTCATCTACTGTTCATCAATGCCATATCTTTGATGTGTTCCTCATATTTCTTCTACATTGTCTTCAGATTCTTATCATCTGATTGAGTTTAGTTGATCTTCTTAGGAAAGTTGTCTTAAATCACCGATTGACCCAAAAACTTAAGCTTATGGGTAAAGATAAATTTAATATTTTATCAATACTTTAATACTCCTTCTAACTTGTGGGCTTGAAATTTGTAGAAGATCCAATTAATGGAAACTAATATTAAATGGAGAATAAATGATCTTGTAGCAGTTAAACTAAAAGTTTAAACAGATGGGTTGTAATAAATTTAATTATATCAACATTTTAGCAAGTTGCATCACCAACATTGAATATTCTGAAAACTTCAGTGCTCTAGGATTGTTGTCAAACATAGTCCTACTCTCTGCTTGTATGTCTTCGTGGTTATATATTCCATGTTGCATCAAATATATGTGATAATCTTTGTTGTTGATGAGGGACTTTGAACATGTTCCATGTTTGGAGAATTACCATAAAATAGGATGCCCTACATCAAAAAGGTTAGTTATTCTTTTAATGGTTCATATAACATGTTCTATATCTCCTAATTTCAAAGATTAGTGTGCAGTACTTTTTAGTAGTTGCTAGTTATTGTTGTAGTAGTTCTTAGCCGTTTGTGCTTTAGTGGATACTCATGTGTTTTAGCCTATATGTGAGTCCAAGTGTTCGGGGCTCTTTGCTTATGTTCCTGTTATTGGTAACTATTCTATCAGTGTAAATAAGCAACTAGTAATATTCTTTTTGTAAAACAATATAGATAGAAAACAACTTTACTCTGTTCAGACATTGAGGGTTGGAGACTTCCCACAAAATGATTCTACTAGCTTACCTCTCACTTTGTGCCTCCCAACCACATACTTTTGACCAACTAGTAGCGACAGCTCCACTGCGCTCACAAAATATACTCTCTGACAGCTAGCCAATCGCGTCCTGGCTCTGATTTCGATGTGTATTTCCCCGCCCCCTCTTCCTTGAACGTGTTAATGCGTATGGGCTGCTTCTTGAGCCTATCACAGTGGTTTATGAACTTTTTTTTTTTCCTAGTTCTAACTTTCAAGGAGTAGTGATTAACTTCTGTTAGTTGGATTTTCCTGTTGAAATAGAATGCCCCTTGTGTTTCTGATAACTACCTGATGTTGACAGTTCCTTTCAGCAAATGGATGGGACCAGCTATCAAAATGTCCCTCCCAAGTTATAGGTAACCGAATCTTCCAATTTACAAATGGTTATGTTCCCCAGATTTGCACCTCATTGGCTTATCACAGTTTCATTGTTCTAAATTATCAGTGGGCATACAGAATATACTCCTGAACTACTCAAATATTCCTGCCAAATTCGATGCAGGTTTGTGTTTCTATTCTCTGATGTTTAACTCTTCATCTCTCATCACATCTAAGGAATTTAGTTTGTTTAAACTGGGAAACTGTTTAAAACAGTCATGTTTAATATTTGTTTGAATTGGATTACTTGAATATATAATTTGCATTTAGGGTGCGAGCAGTAAAGCCAGCAGCAGTCTCGGTTGAATTTCCTGCATCAAATGACGGAGCACAAGATGGAAACCACCATTCTCATATTACAAGAGCTGGAGAAGATGCAGAACATGAAGACAGCCTCTGTACATCTGTACTATTGTCAAAGCCCATACTAGCTTTAGAGTTTAGTTGCATGGAAATGCAAGTCCAAGCTCCCACTGTTGTTTCTCAGTATTTTAAACACTCTCTCAGAACACCATGA

mRNA sequence

ATGCGTCAGAGTGAAAGAGGACTTCTTAACTCCTTAGATAGAAATAGTAATTTCTACAACCAAAAGAATCAGGAGCATGTCCAAGTGACTGAAGTCAAGGGTCCTACTTCAATTGATGTCTGCAATATCAACCTTTCAATTTCTGTTCCTTTCAGCAAATGGATGGGACCAGCTATCAAAATGTCCCTCCCAAGTTATAGTGGGCATACAGAATATACTCCTGAACTACTCAAATATTCCTGCCAAATTCGATGCAGGGTGCGAGCAGTAAAGCCAGCAGCAGTCTCGGTTGAATTTCCTGCATCAAATGACGGAGCACAAGATGGAAACCACCATTCTCATATTACAAGAGCTGGAGAAGATGCAGAACATGAAGACAGCCTCTGTACATCTGTACTATTGTCAAAGCCCATACTAGCTTTAGAGTTTAGTTGCATGGAAATGCAAGTCCAAGCTCCCACTGTTGTTTCTCAGTATTTTAAACACTCTCTCAGAACACCATGA

Coding sequence (CDS)

ATGCGTCAGAGTGAAAGAGGACTTCTTAACTCCTTAGATAGAAATAGTAATTTCTACAACCAAAAGAATCAGGAGCATGTCCAAGTGACTGAAGTCAAGGGTCCTACTTCAATTGATGTCTGCAATATCAACCTTTCAATTTCTGTTCCTTTCAGCAAATGGATGGGACCAGCTATCAAAATGTCCCTCCCAAGTTATAGTGGGCATACAGAATATACTCCTGAACTACTCAAATATTCCTGCCAAATTCGATGCAGGGTGCGAGCAGTAAAGCCAGCAGCAGTCTCGGTTGAATTTCCTGCATCAAATGACGGAGCACAAGATGGAAACCACCATTCTCATATTACAAGAGCTGGAGAAGATGCAGAACATGAAGACAGCCTCTGTACATCTGTACTATTGTCAAAGCCCATACTAGCTTTAGAGTTTAGTTGCATGGAAATGCAAGTCCAAGCTCCCACTGTTGTTTCTCAGTATTTTAAACACTCTCTCAGAACACCATGA

Protein sequence

MRQSERGLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMGPAIKMSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPASNDGAQDGNHHSHITRAGEDAEHEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Homology
[Close]
BLAST of Cla012783 vs. Swiss-Prot
Match: NDX1_ARATH (Protein NEOXANTHIN-DEFICIENT 1 OS=Arabidopsis thaliana GN=NDX1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.9e-28
Identity = 66/151 (43.71%), Postives = 88/151 (58.28%), Query Frame = 1 

Query: 7   GLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINL-SISVPFSKWMGPAIKMSLPS 66
           G L++    +   + +N   V+V+EV    S D+CNI + S       WMGPAIKM+LPS
Sbjct: 133 GFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIRSDETKVGNWMGPAIKMALPS 192

Query: 67  YSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPASNDGAQDGNHHSHITRAGEDAEHE 126
           +SG+T Y   LLKYSC + CRVR V+PA VS       +   + NH S      E  E+E
Sbjct: 193 FSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGALEDETEKFTEQNHTSQ-----ESLENE 252

Query: 127 DSLCTSVLLSKPILALEFSCMEMQVQAPTVV 157
             L  +V+LSKPI+AL+F C+ MQV+AP V+
Sbjct: 253 RQLSKAVMLSKPIIALQFKCLTMQVEAPVVI 278

[Close]
BLAST of Cla012783 vs. Swiss-Prot
Match: NDX1_SOLLC (Protein NEOXANTHIN-DEFICIENT 1 OS=Solanum lycopersicum GN=NXD1 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.8e-27
Identity = 66/145 (45.52%), Postives = 91/145 (62.76%), Query Frame = 1 

Query: 20  NQKNQEHVQVTEVKGPTSIDVCNINLSISVPFSK---WMGPAIKMSLPSYSGHTEYTPEL 79
           N KN   V+VTE+K  T++ +CNIN++ +        WMGP IKMSLP++SG T+Y  +L
Sbjct: 146 NYKNHMDVEVTEIKKQTAMSICNINVNATASQQDSKGWMGPLIKMSLPNFSGRTKYNSDL 205

Query: 80  LKYSCQIRCRVRAVKPAAVS----VEFPASNDGAQDGNHHSHITRAGEDAEHEDSLCTSV 139
           LKYSCQI CRVRAV+PA VS     +    N      ++   ++R     +   S+  SV
Sbjct: 206 LKYSCQIECRVRAVQPAKVSGPSESDADKENSSEDQSSNVESVSRVPRGTKRNFSI--SV 265

Query: 140 LLSKPILALEFSCMEMQVQAPTVVS 158
           +LSKPILALEF+ ++M+V+APT V+
Sbjct: 266 MLSKPILALEFNHLKMRVEAPTTVT 288

[Close]
BLAST of Cla012783 vs. Swiss-Prot
Match: NDX1_ORYSJ (Protein NEOXANTHIN-DEFICIENT 1 OS=Oryza sativa subsp. japonica GN=NDX1 PE=3 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24
Identity = 64/157 (40.76%), Postives = 89/157 (56.69%), Query Frame = 1 

Query: 9   LNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPFS-KWMGPAIKMSLPSYS 68
           L+ L   S   NQ N   ++++E KG  +  +CNI++ ++     KWMGPAI+MSLPS+S
Sbjct: 141 LSLLGMRSTVSNQGNDREIEISETKGSCTRHLCNISVPLTGSHKHKWMGPAIRMSLPSFS 200

Query: 69  GHTEYTPELLKYSCQIRCRVRAVKPAAV---SVEFPASNDGAQDGNHHSHITRAGEDAEH 128
           G  E  P+LLKYSCQ+ CRVR V+PA +    +  P      +  +  S +    +  +H
Sbjct: 201 GQIEDHPDLLKYSCQVECRVRPVRPAKIWRPRITEPQECPDGKISSKGSEVLAEPDAQKH 260

Query: 129 EDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFK 162
                  VLLSKPILALEF+ +EM V AP +V  + K
Sbjct: 261 ----TVMVLLSKPILALEFNSLEMHVDAPKIVIPHSK 293

[Close]
BLAST of Cla012783 vs. TrEMBL
Match: A0A0A0KYQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G008790 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 5.8e-74
Identity = 143/165 (86.67%), Postives = 150/165 (90.91%), Query Frame = 1 

Query: 3   QSERGLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMGPAIKMS 62
           QSE+GLL+ L  NSNF+NQKNQEHVQV EVKGPTS+DVCNINLS SVPFSKWMGPAIKMS
Sbjct: 145 QSEKGLLSFLRGNSNFHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVPFSKWMGPAIKMS 204

Query: 63  LPSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPASNDGAQDGNHHSHITRAGEDA 122
           LPSYSGHTEYTPELLKYSCQIRCRVRAVKPA VS+  PA N  A+DG+HHSHITR GE  
Sbjct: 205 LPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSI--PALN-RAEDGDHHSHITRTGEYG 264

Query: 123 EHEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 168
           EHE SLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Sbjct: 265 EHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 306

[Close]
BLAST of Cla012783 vs. TrEMBL
Match: D7TYT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0244g00110 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.3e-37
Identity = 87/174 (50.00%), Postives = 114/174 (65.52%), Query Frame = 1 

Query: 2   RQSERGLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPF---SKWMGPA 61
           R    G LN +   + F + K+   VQVTE++G T+ D C++NL+ +VP     KWMGPA
Sbjct: 147 RSKTNGFLNMIGIGNTFNSPKDCMDVQVTEIEGHTAADACSVNLNTAVPLLKPEKWMGPA 206

Query: 62  IKMSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPA---SNDGAQDGNHHSHI 121
           IKMSLPS+SGHT Y P LLKYSCQI CRVRAVKPA VS   P      +  ++G+    I
Sbjct: 207 IKMSLPSFSGHTVYNPNLLKYSCQIECRVRAVKPARVSSPSPGPKNEKENEKEGSPRHQI 266

Query: 122 -----TRAGEDAEHEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSL 165
                + A E  E+ ++LC SV+LSKP+LALEF+C+ MQV+AP VVS   K++L
Sbjct: 267 FSSMDSTAVETIENGENLCVSVMLSKPVLALEFNCLNMQVEAPIVVSHCSKNTL 320

[Close]
BLAST of Cla012783 vs. TrEMBL
Match: M5Y540_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009508mg PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.1e-36
Identity = 86/163 (52.76%), Postives = 106/163 (65.03%), Query Frame = 1 

Query: 7   GLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPFSK---WMGPAIKMSL 66
           G LN++  N+ F   ++   VQVTE+  PT  D+CNINL+  VP S    WMGPAIKMSL
Sbjct: 128 GFLNAIGMNAVFCEPRDCMDVQVTEINDPTVKDICNINLTTFVPASNIGNWMGPAIKMSL 187

Query: 67  PSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPASNDGAQDGNHHSHITRAGEDAE 126
           PS+SG TEY P LLKYSCQI CRVRAV PA VS         A+  +   H T   E  +
Sbjct: 188 PSFSGRTEYYPNLLKYSCQIECRVRAVHPAKVSGPPSMPKSEAEQSSEIHHATE--EFMD 247

Query: 127 HEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRT 167
           +  +LC +V+ SKPILAL+FSCM+MQV+AP VV   F +SL T
Sbjct: 248 NSKNLCVAVMSSKPILALKFSCMKMQVEAPVVVPNSFNNSLAT 288

[Close]
BLAST of Cla012783 vs. TrEMBL
Match: B9RFY8_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1438150 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.3e-35
Identity = 80/144 (55.56%), Postives = 106/144 (73.61%), Query Frame = 1 

Query: 27  VQVTEVKGPTSIDVCNINLSISVPFSKWMGPAIKMSLPSYSGHTEYTPELLKYSCQIRCR 86
           VQVTE+ G ++ ++CNINL+ +VP  KWMGPAIKMSLPS+SG TE+ P LLKYSC I CR
Sbjct: 689 VQVTEINGASTTNICNINLATAVPGIKWMGPAIKMSLPSFSGRTEHNPNLLKYSCNIECR 748

Query: 87  VRAVKPAAVSVEFPASNDGAQD--GNHHSHITRA--GEDAEHEDSLCTSVLLSKPILALE 146
           VRAV+PA +SV FPAS    ++  G+H+  I  +  GE  ++  +L  SV+LS+PILALE
Sbjct: 749 VRAVRPAEISVPFPASKHRTEESLGHHNCKIADSVTGEILDNGQNLSLSVMLSRPILALE 808

Query: 147 FSCMEMQVQAPTVVSQYFKHSLRT 167
           F+ ++MQV+AP+ VS   K S RT
Sbjct: 809 FNYLKMQVEAPSPVSHCSKSSCRT 832

[Close]
BLAST of Cla012783 vs. TrEMBL
Match: A0A061E5R0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008385 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.4e-33
Identity = 81/162 (50.00%), Postives = 104/162 (64.20%), Query Frame = 1 

Query: 7   GLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVP---FSKWMGPAIKMSL 66
           G LN +   +  ++ K+   VQV EV G  S D+C+I L   VP   F+KWMGP+I MSL
Sbjct: 133 GFLNMIGMGTTIHHSKDCMEVQVAEVVGHASADICSIKLITDVPTPRFNKWMGPSITMSL 192

Query: 67  PSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPASNDGAQDGNHHSHITRAGEDAE 126
           PS+SG TEY P LLKYSC+I CRVRAV+PA VS   P   D  +D +  +    + E  +
Sbjct: 193 PSFSGQTEYNPNLLKYSCRIACRVRAVRPARVSGPSPLKRD--RDSDLETTDFTSDEPVD 252

Query: 127 HEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLR 166
           +  +L  SVLLSKPILALEF+C EMQV+AP ++S     SLR
Sbjct: 253 NGRNLSISVLLSKPILALEFNCFEMQVEAPIILSNDSTSSLR 292

[Close]
BLAST of Cla012783 vs. NCBI nr
Match: gi|659108313|ref|XP_008454132.1| (PREDICTED: uncharacterized protein LOC103494625 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 9.4e-78
Identity = 147/166 (88.55%), Postives = 154/166 (92.77%), Query Frame = 1 

Query: 2   RQSERGLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMGPAIKM 61
           RQSERGLL+ L  NSNF+NQKNQEHVQVTEVKGPTSIDVCNINLS SVPFSKWMGPAIKM
Sbjct: 127 RQSERGLLSFLRENSNFHNQKNQEHVQVTEVKGPTSIDVCNINLSFSVPFSKWMGPAIKM 186

Query: 62  SLPSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPASNDGAQDGNHHSHITRAGED 121
           SLPSYSGHTEY+PELLKYSCQI+CRVRAVKPA VSVE PA N  A+DG+HHSHITR+GED
Sbjct: 187 SLPSYSGHTEYSPELLKYSCQIQCRVRAVKPATVSVELPALN-RAEDGDHHSHITRSGED 246

Query: 122 AEHEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 168
            EHE SLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYF HSLRTP
Sbjct: 247 GEHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFNHSLRTP 291

[Close]
BLAST of Cla012783 vs. NCBI nr
Match: gi|449468896|ref|XP_004152157.1| (PREDICTED: uncharacterized protein LOC101204328 isoform X2 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 8.3e-74
Identity = 143/165 (86.67%), Postives = 150/165 (90.91%), Query Frame = 1 

Query: 3   QSERGLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMGPAIKMS 62
           QSE+GLL+ L  NSNF+NQKNQEHVQV EVKGPTS+DVCNINLS SVPFSKWMGPAIKMS
Sbjct: 128 QSEKGLLSFLRGNSNFHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVPFSKWMGPAIKMS 187

Query: 63  LPSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPASNDGAQDGNHHSHITRAGEDA 122
           LPSYSGHTEYTPELLKYSCQIRCRVRAVKPA VS+  PA N  A+DG+HHSHITR GE  
Sbjct: 188 LPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSI--PALN-RAEDGDHHSHITRTGEYG 247

Query: 123 EHEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 168
           EHE SLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Sbjct: 248 EHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 289

[Close]
BLAST of Cla012783 vs. NCBI nr
Match: gi|778689763|ref|XP_011653014.1| (PREDICTED: uncharacterized protein LOC101204328 isoform X1 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 8.3e-74
Identity = 143/165 (86.67%), Postives = 150/165 (90.91%), Query Frame = 1 

Query: 3   QSERGLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMGPAIKMS 62
           QSE+GLL+ L  NSNF+NQKNQEHVQV EVKGPTS+DVCNINLS SVPFSKWMGPAIKMS
Sbjct: 145 QSEKGLLSFLRGNSNFHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVPFSKWMGPAIKMS 204

Query: 63  LPSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPASNDGAQDGNHHSHITRAGEDA 122
           LPSYSGHTEYTPELLKYSCQIRCRVRAVKPA VS+  PA N  A+DG+HHSHITR GE  
Sbjct: 205 LPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSI--PALN-RAEDGDHHSHITRTGEYG 264

Query: 123 EHEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 168
           EHE SLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Sbjct: 265 EHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 306

[Close]
BLAST of Cla012783 vs. NCBI nr
Match: gi|296088173|emb|CBI35665.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 162.9 bits (411), Expect = 4.7e-37
Identity = 87/174 (50.00%), Postives = 114/174 (65.52%), Query Frame = 1 

Query: 2   RQSERGLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPF---SKWMGPA 61
           R    G LN +   + F + K+   VQVTE++G T+ D C++NL+ +VP     KWMGPA
Sbjct: 147 RSKTNGFLNMIGIGNTFNSPKDCMDVQVTEIEGHTAADACSVNLNTAVPLLKPEKWMGPA 206

Query: 62  IKMSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPA---SNDGAQDGNHHSHI 121
           IKMSLPS+SGHT Y P LLKYSCQI CRVRAVKPA VS   P      +  ++G+    I
Sbjct: 207 IKMSLPSFSGHTVYNPNLLKYSCQIECRVRAVKPARVSSPSPGPKNEKENEKEGSPRHQI 266

Query: 122 -----TRAGEDAEHEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSL 165
                + A E  E+ ++LC SV+LSKP+LALEF+C+ MQV+AP VVS   K++L
Sbjct: 267 FSSMDSTAVETIENGENLCVSVMLSKPVLALEFNCLNMQVEAPIVVSHCSKNTL 320

[Close]
BLAST of Cla012783 vs. NCBI nr
Match: gi|731376874|ref|XP_010656823.1| (PREDICTED: uncharacterized protein LOC100260840 isoform X1 [Vitis vinifera])

HSP 1 Score: 162.9 bits (411), Expect = 4.7e-37
Identity = 87/174 (50.00%), Postives = 114/174 (65.52%), Query Frame = 1 

Query: 2   RQSERGLLNSLDRNSNFYNQKNQEHVQVTEVKGPTSIDVCNINLSISVPF---SKWMGPA 61
           R    G LN +   + F + K+   VQVTE++G T+ D C++NL+ +VP     KWMGPA
Sbjct: 133 RSKTNGFLNMIGIGNTFNSPKDCMDVQVTEIEGHTAADACSVNLNTAVPLLKPEKWMGPA 192

Query: 62  IKMSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPAAVSVEFPA---SNDGAQDGNHHSHI 121
           IKMSLPS+SGHT Y P LLKYSCQI CRVRAVKPA VS   P      +  ++G+    I
Sbjct: 193 IKMSLPSFSGHTVYNPNLLKYSCQIECRVRAVKPARVSSPSPGPKNEKENEKEGSPRHQI 252

Query: 122 -----TRAGEDAEHEDSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSL 165
                + A E  E+ ++LC SV+LSKP+LALEF+C+ MQV+AP VVS   K++L
Sbjct: 253 FSSMDSTAVETIENGENLCVSVMLSKPVLALEFNCLNMQVEAPIVVSHCSKNTL 306

The following BLAST results are available for this feature:
BLAST of Cla012783 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDX1_ARATH6.9e-2843.71Protein NEOXANTHIN-DEFICIENT 1 OS=Arabidopsis thaliana GN=NDX1 PE=2 SV=1[more]
NDX1_SOLLC5.8e-2745.52Protein NEOXANTHIN-DEFICIENT 1 OS=Solanum lycopersicum GN=NXD1 PE=4 SV=1[more]
NDX1_ORYSJ2.1e-2440.76Protein NEOXANTHIN-DEFICIENT 1 OS=Oryza sativa subsp. japonica GN=NDX1 PE=3 SV=2[more]
BLAST of Cla012783 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYQ3_CUCSA5.8e-7486.67Uncharacterized protein OS=Cucumis sativus GN=Csa_4G008790 PE=4 SV=1[more]
D7TYT8_VITVI3.3e-3750.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0244g00110 PE=4 SV=... [more]
M5Y540_PRUPE8.1e-3652.76Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009508mg PE=4 SV=1[more]
B9RFY8_RICCO5.3e-3555.56Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A061E5R0_THECC8.4e-3350.00Uncharacterized protein OS=Theobroma cacao GN=TCM_008385 PE=4 SV=1[more]
BLAST of Cla012783 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108313|ref|XP_008454132.1|9.4e-7888.55PREDICTED: uncharacterized protein LOC103494625 [Cucumis melo][more]
gi|449468896|ref|XP_004152157.1|8.3e-7486.67PREDICTED: uncharacterized protein LOC101204328 isoform X2 [Cucumis sativus][more]
gi|778689763|ref|XP_011653014.1|8.3e-7486.67PREDICTED: uncharacterized protein LOC101204328 isoform X1 [Cucumis sativus][more]
gi|296088173|emb|CBI35665.3|4.7e-3750.00unnamed protein product [Vitis vinifera][more]
gi|731376874|ref|XP_010656823.1|4.7e-3750.00PREDICTED: uncharacterized protein LOC100260840 isoform X1 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU44817watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012783Cla012783.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU44817WMU44817transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35467FAMILY NOT NAMEDcoord: 2..162
score: 9.8
NoneNo IPR availablePANTHERPTHR35467:SF2SUBFAMILY NOT NAMEDcoord: 2..162
score: 9.8