Cla012573 (gene) Watermelon (97103) v1

NameCla012573
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCytochrome P450 (AHRD V1 ***- F4YF79_9APIA); contains Interpro domain(s) IPR001128 Cytochrome P450
LocationChr7 : 24158694 .. 24158957 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATAAAAGGGTTACATAACTTTGAATTTTTGCCATTTGGATCTGGAAGGAGGATGTGTCCTGGTTACAGTCTTGGTTTCAAAGTTATATTGTCAACCTTGGCCAATCTCTTGCATGGCTTTTCTTGGAAATTGCCTGACAATATCAAGAATGAGGATCTTAACATGGACGAAGCTAATGGACTCACAATTCCTAGGAAATTCCCTCTCATTGCTCTTGCTACGCCTCGACTCCCTATCCATGTTTATAACTTGGAATGA

mRNA sequence

ATGGACATAAAAGGGTTACATAACTTTGAATTTTTGCCATTTGGATCTGGAAGGAGGATGTGTCCTGGTTACAGTCTTGGTTTCAAAGTTATATTGTCAACCTTGGCCAATCTCTTGCATGGCTTTTCTTGGAAATTGCCTGACAATATCAAGAATGAGGATCTTAACATGGACGAAGCTAATGGACTCACAATTCCTAGGAAATTCCCTCTCATTGCTCTTGCTACGCCTCGACTCCCTATCCATGTTTATAACTTGGAATGA

Coding sequence (CDS)

ATGGACATAAAAGGGTTACATAACTTTGAATTTTTGCCATTTGGATCTGGAAGGAGGATGTGTCCTGGTTACAGTCTTGGTTTCAAAGTTATATTGTCAACCTTGGCCAATCTCTTGCATGGCTTTTCTTGGAAATTGCCTGACAATATCAAGAATGAGGATCTTAACATGGACGAAGCTAATGGACTCACAATTCCTAGGAAATTCCCTCTCATTGCTCTTGCTACGCCTCGACTCCCTATCCATGTTTATAACTTGGAATGA

Protein sequence

MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEANGLTIPRKFPLIALATPRLPIHVYNLE
BLAST of Cla012573 vs. Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.8e-17
Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D KGL NFEFLPFGSGRRMCPG  +G  ++  TL NLL+ F WKLP+ ++ ED++++E+
Sbjct: 417 IDYKGL-NFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEES 476

Query: 61  NGLTIPRKFPL 72
            GL  P+K PL
Sbjct: 477 YGLVCPKKVPL 486

BLAST of Cla012573 vs. Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-16
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG H+F  LPFGSGRR+CPG  LG  +  S L +LLH F W  P+ +K E+++M E 
Sbjct: 420 VDMKG-HDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGEN 479

Query: 61  NGLTIPRKFPLIALATPRLPIHVY 85
            GL    + P+ A+ +PRLP H+Y
Sbjct: 480 PGLVTYMRTPIQAVVSPRLPSHLY 502

BLAST of Cla012573 vs. Swiss-Prot
Match: C84A4_ARATH (Cytochrome P450 84A4 OS=Arabidopsis thaliana GN=CYP84A4 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.1e-16
Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 1

Query: 2   DIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEAN 61
           D+KG +NFEF+PFGSGRR CPG  LG       +A+LLH F+W LPD +   D++  E  
Sbjct: 429 DLKG-NNFEFVPFGSGRRSCPGMQLGLYAFELAVAHLLHCFTWSLPDGMNPGDVDTVEGP 488

Query: 62  GLTIPRKFPLIALATPRL 80
           GLT+P+  PL+A+ T RL
Sbjct: 489 GLTVPKAIPLVAVPTTRL 505

BLAST of Cla012573 vs. Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.3e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D KGL NFE LPFGSGRR+CPG  +G  +I  TL NLL+ F WKLP+ ++ ED++++E+
Sbjct: 417 IDYKGL-NFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEES 476

Query: 61  NGLTIPRKFPL 72
            GL  P+K PL
Sbjct: 477 YGLVCPKKVPL 486

BLAST of Cla012573 vs. Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.0e-16
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 1

Query: 2   DIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEAN 61
           D KGL NFE LPFGSGRRMCPG  +G  V+  TL NLL+ F WKLP+ +K E+L+++E  
Sbjct: 418 DFKGL-NFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENY 477

Query: 62  GLTIPRKFPLIAL 75
           GL   +K PL A+
Sbjct: 478 GLICVKKLPLEAI 489

BLAST of Cla012573 vs. TrEMBL
Match: A0A0D2UBD4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G088700 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG  NFE LPFGSGRRMCPGYSLG K+I S+LANLLHGF+WKLPDN K EDL+MDE 
Sbjct: 433 IDVKG-QNFELLPFGSGRRMCPGYSLGLKMIQSSLANLLHGFNWKLPDNTKAEDLSMDEV 492

Query: 61  NGLTIPRKFPLIALATPRLPIHVY 85
            GL  PRKFPL+A+  PRLP+H+Y
Sbjct: 493 YGLATPRKFPLVAVIEPRLPLHLY 515

BLAST of Cla012573 vs. TrEMBL
Match: A0A061GLI1_THECC (Cytochrome P450 superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_037521 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.5e-28
Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG H FE LPFGSGRRMCPGYSLG K+I S+LANLLHGF+WKLPDN K EDL+M+E 
Sbjct: 455 IDVKGQH-FELLPFGSGRRMCPGYSLGLKMIRSSLANLLHGFNWKLPDNTKAEDLSMEEV 514

Query: 61  NGLTIPRKFPLIALATPRLPIHVYNL 87
            GL  PRKFPL+A+  PRLP+H+Y +
Sbjct: 515 YGLATPRKFPLVAVLEPRLPLHLYKI 539

BLAST of Cla012573 vs. TrEMBL
Match: A0A061GM88_THECC (Cytochrome P450 superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_037521 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.5e-28
Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG H FE LPFGSGRRMCPGYSLG K+I S+LANLLHGF+WKLPDN K EDL+M+E 
Sbjct: 428 IDVKGQH-FELLPFGSGRRMCPGYSLGLKMIRSSLANLLHGFNWKLPDNTKAEDLSMEEV 487

Query: 61  NGLTIPRKFPLIALATPRLPIHVYNL 87
            GL  PRKFPL+A+  PRLP+H+Y +
Sbjct: 488 YGLATPRKFPLVAVLEPRLPLHLYKI 512

BLAST of Cla012573 vs. TrEMBL
Match: M5W7U8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023335mg PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.2e-28
Identity = 59/84 (70.24%), Postives = 72/84 (85.71%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG  +FEFLPFGSGRRMCPGYSLG KVI S LAN+LHGF+WKLP+N+K EDL+M+E 
Sbjct: 426 IDVKG-QSFEFLPFGSGRRMCPGYSLGLKVIRSCLANMLHGFNWKLPENMKTEDLDMEEV 485

Query: 61  NGLTIPRKFPLIALATPRLPIHVY 85
            GL  PRKFP++A+  PRLPIH+Y
Sbjct: 486 YGLITPRKFPILAIVEPRLPIHLY 508

BLAST of Cla012573 vs. TrEMBL
Match: M5WT87_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004436mg PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 9.5e-28
Identity = 58/86 (67.44%), Postives = 74/86 (86.05%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG  +FE LPFGSGRRMCPGYSLG KVI ++LANLLHGF+W+LPDN+K EDLNM+E 
Sbjct: 426 IDVKG-QDFELLPFGSGRRMCPGYSLGIKVIQASLANLLHGFTWRLPDNLKEEDLNMEEI 485

Query: 61  NGLTIPRKFPLIALATPRLPIHVYNL 87
            GL+ P+K+PL+A+  PRLP HVY++
Sbjct: 486 FGLSTPKKYPLVAVCEPRLPPHVYSI 510

BLAST of Cla012573 vs. NCBI nr
Match: gi|747051756|ref|XP_011071969.1| (PREDICTED: flavonoid 3'-monooxygenase-like [Sesamum indicum])

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-28
Identity = 60/86 (69.77%), Postives = 75/86 (87.21%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D++G H+FE LPFG+GRRMCPGYSLG KVILS+LANL+HGF+WKLPD +K EDLNM+E 
Sbjct: 423 IDVRG-HDFELLPFGAGRRMCPGYSLGLKVILSSLANLIHGFNWKLPDPMKPEDLNMEEV 482

Query: 61  NGLTIPRKFPLIALATPRLPIHVYNL 87
            GL++PRK PL+A+  PRLP+ VYNL
Sbjct: 483 FGLSVPRKVPLVAVPEPRLPLEVYNL 507

BLAST of Cla012573 vs. NCBI nr
Match: gi|823240579|ref|XP_012452899.1| (PREDICTED: flavonoid 3'-monooxygenase-like [Gossypium raimondii])

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-28
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG  NFE LPFGSGRRMCPGYSLG K+I S+LANLLHGF+WKLPDN K EDL+MDE 
Sbjct: 433 IDVKG-QNFELLPFGSGRRMCPGYSLGLKMIQSSLANLLHGFNWKLPDNTKAEDLSMDEV 492

Query: 61  NGLTIPRKFPLIALATPRLPIHVY 85
            GL  PRKFPL+A+  PRLP+H+Y
Sbjct: 493 YGLATPRKFPLVAVIEPRLPLHLY 515

BLAST of Cla012573 vs. NCBI nr
Match: gi|590575231|ref|XP_007012628.1| (Cytochrome P450 superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 132.5 bits (332), Expect = 3.6e-28
Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG H FE LPFGSGRRMCPGYSLG K+I S+LANLLHGF+WKLPDN K EDL+M+E 
Sbjct: 428 IDVKGQH-FELLPFGSGRRMCPGYSLGLKMIRSSLANLLHGFNWKLPDNTKAEDLSMEEV 487

Query: 61  NGLTIPRKFPLIALATPRLPIHVYNL 87
            GL  PRKFPL+A+  PRLP+H+Y +
Sbjct: 488 YGLATPRKFPLVAVLEPRLPLHLYKI 512

BLAST of Cla012573 vs. NCBI nr
Match: gi|590575235|ref|XP_007012629.1| (Cytochrome P450 superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 132.5 bits (332), Expect = 3.6e-28
Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG H FE LPFGSGRRMCPGYSLG K+I S+LANLLHGF+WKLPDN K EDL+M+E 
Sbjct: 455 IDVKGQH-FELLPFGSGRRMCPGYSLGLKMIRSSLANLLHGFNWKLPDNTKAEDLSMEEV 514

Query: 61  NGLTIPRKFPLIALATPRLPIHVYNL 87
            GL  PRKFPL+A+  PRLP+H+Y +
Sbjct: 515 YGLATPRKFPLVAVLEPRLPLHLYKI 539

BLAST of Cla012573 vs. NCBI nr
Match: gi|595816933|ref|XP_007204134.1| (hypothetical protein PRUPE_ppa023335mg [Prunus persica])

HSP 1 Score: 131.7 bits (330), Expect = 6.1e-28
Identity = 59/84 (70.24%), Postives = 72/84 (85.71%), Query Frame = 1

Query: 1   MDIKGLHNFEFLPFGSGRRMCPGYSLGFKVILSTLANLLHGFSWKLPDNIKNEDLNMDEA 60
           +D+KG  +FEFLPFGSGRRMCPGYSLG KVI S LAN+LHGF+WKLP+N+K EDL+M+E 
Sbjct: 426 IDVKG-QSFEFLPFGSGRRMCPGYSLGLKVIRSCLANMLHGFNWKLPENMKTEDLDMEEV 485

Query: 61  NGLTIPRKFPLIALATPRLPIHVY 85
            GL  PRKFP++A+  PRLPIH+Y
Sbjct: 486 YGLITPRKFPILAIVEPRLPIHLY 508

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
C71BB_ARATH4.8e-1756.34Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1[more]
C98A2_SOYBN2.4e-1647.62Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1[more]
C84A4_ARATH4.1e-1651.28Cytochrome P450 84A4 OS=Arabidopsis thaliana GN=CYP84A4 PE=1 SV=1[more]
C71BD_ARATH5.3e-1654.93Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1[more]
C71B1_THLAR7.0e-1656.16Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0D2UBD4_GOSRA1.5e-2872.62Uncharacterized protein OS=Gossypium raimondii GN=B456_010G088700 PE=3 SV=1[more]
A0A061GLI1_THECC2.5e-2869.77Cytochrome P450 superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_037521 P... [more]
A0A061GM88_THECC2.5e-2869.77Cytochrome P450 superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_037521 P... [more]
M5W7U8_PRUPE4.2e-2870.24Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023335mg PE=3 SV=1[more]
M5WT87_PRUPE9.5e-2867.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004436mg PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|747051756|ref|XP_011071969.1|1.6e-2869.77PREDICTED: flavonoid 3'-monooxygenase-like [Sesamum indicum][more]
gi|823240579|ref|XP_012452899.1|2.1e-2872.62PREDICTED: flavonoid 3'-monooxygenase-like [Gossypium raimondii][more]
gi|590575231|ref|XP_007012628.1|3.6e-2869.77Cytochrome P450 superfamily protein isoform 1 [Theobroma cacao][more]
gi|590575235|ref|XP_007012629.1|3.6e-2869.77Cytochrome P450 superfamily protein isoform 2 [Theobroma cacao][more]
gi|595816933|ref|XP_007204134.1|6.1e-2870.24hypothetical protein PRUPE_ppa023335mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001128Cyt_P450
IPR002401Cyt_P450_E_grp-I
IPR017972Cyt_P450_CS
Vocabulary: Molecular Function
TermDefinition
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506iron ion binding
GO:0020037heme binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0033772 flavonoid 3',5'-hydroxylase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012573Cla012573.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001128Cytochrome P450GENE3DG3DSA:1.10.630.10coord: 7..78
score: 1.3
IPR001128Cytochrome P450PFAMPF00067p450coord: 6..65
score: 5.
IPR001128Cytochrome P450unknownSSF48264Cytochrome P450coord: 5..78
score: 5.76
IPR002401Cytochrome P450, E-class, group IPRINTSPR00463EP450Icoord: 11..21
score: 9.3E-5coord: 21..44
score: 9.
IPR017972Cytochrome P450, conserved sitePROSITEPS00086CYTOCHROME_P450coord: 14..23
scor
NoneNo IPR availablePANTHERPTHR24298FAMILY NOT NAMEDcoord: 1..82
score: 4.4
NoneNo IPR availablePANTHERPTHR24298:SF67SUBFAMILY NOT NAMEDcoord: 1..82
score: 4.4