Cla012510 (gene) Watermelon (97103) v1

NameCla012510
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr8 : 182377 .. 182601 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCGGTTCTTAGGGATTGGAAGGGGCACTTGATTGGAGCATCTGCTCGCTTCATCACTTTAGACTATTCTCCCCCGTTGGCTGAAATCCTAGCTATTCAGGAAGTTTCCAAGTTCGTGGTTGCTCTGGAAATCCCACACCTGATAGTGGAATCAGACTGTTTGCAAGCAATAGATCTGTTAAATTCTGAAGCTGAAGGTTTTTGTGGTGTGGATTGTTAG

mRNA sequence

ATGGGAGCGGTTCTTAGGGATTGGAAGGGGCACTTGATTGGAGCATCTGCTCGCTTCATCACTTTAGACTATTCTCCCCCGTTGGCTGAAATCCTAGCTATTCAGGAAGTTTCCAAGTTCGTGGTTGCTCTGGAAATCCCACACCTGATAGTGGAATCAGACTGTTTGCAAGCAATAGATCTGTTAAATTCTGAAGCTGAAGGTTTTTGTGGTGTGGATTGTTAG

Coding sequence (CDS)

ATGGGAGCGGTTCTTAGGGATTGGAAGGGGCACTTGATTGGAGCATCTGCTCGCTTCATCACTTTAGACTATTCTCCCCCGTTGGCTGAAATCCTAGCTATTCAGGAAGTTTCCAAGTTCGTGGTTGCTCTGGAAATCCCACACCTGATAGTGGAATCAGACTGTTTGCAAGCAATAGATCTGTTAAATTCTGAAGCTGAAGGTTTTTGTGGTGTGGATTGTTAG

Protein sequence

MGAVLRDWKGHLIGASARFITLDYSPPLAEILAIQEVSKFVVALEIPHLIVESDCLQAIDLLNSEAEGFCGVDC
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012510Cla012510.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33033FAMILY NOT NAMEDcoord: 1..65
score: 1.0
NoneNo IPR availablePFAMPF13456RVT_3coord: 2..67
score: 2.