Cla012380 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGGTCAAGTCAAGATCGTGTAGCAGATGAATTAGTTCGAGAAGCTAACACTTTGGCTACAGATCCTGCGGTAGAGGCAGGTAGGACCCCCGCATCAGGTGATAATAGTATGTCTAAGGTTGTAGTTGTACATCTGAATATGATTGTAACATATAATTGAAGTAGCACATTTGTTGTTCTTGTTACAGGATAAAAAAGGAAGCATGGGCGAGGACATAGCCAAAATATTAATTTGGATTCATATGTGCAACGTCATGGGTGGATCCCAATTACCATTGAAGAGAATGTTGGAAAACCAGTACGAAGTTTAGCAATGCCATTGGGACCGTGACCCGGGACACAATTTCAGTGCTCTGCTCTAAGTGGAAAGATGTACAGAGCGATACCATCGCCACTATAAAGGATCGTTTATTGGTAAGTTTTATGTTATAGTCTTAATCTCATATGTGTGTACTTACCATAACTTTTATTGGATATATAGACACATTTTGATGTGGACCTATCAAAGGGGGTTGTCAATAAGTTCATAAATCGACAAATACAAAATTCATTTAAAGAATATAGATCAGAATTGCATAAACACTACTGTAAGTTTGAGAATCCTCTGATTGCTCATGAAAACCCACCAGAAAGGATAGCTAATAAAGAAGATTGGGAGATTCTTTGTGATCGATGGGAGACTCTTGAATGGCAGGTAAAAGTTATGCATTTGTTATACTTATGGTTTACACAAATTAATTGTACTCATAAATTATAAATTTATATAGGAAAAGAGGGAGAAGAACAAGAAATGTAGAGAATGTCTCAGCTTTAACCTTTTTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTGGTATGATTCACATTCATTACTATTTTATTACTTTTCTAGTAAATCTAAACTCTAGGTGTTTTTTTTTTCTTTTTTTTTTTAATTTTTAAATTGAATTATAAACAATCAGTAAAGTTGAAAAGGTTGGCCAAGTGAAATTATTTCACAAGAGTCATTTCTCAGAGAATGATGGGTGGGTAAACGATGCCGTCAAAGAAGCATACGTAAGTTATATTGTATTATACATGTGTAATTTTATATTAACCCTTATATATTTATAATATATATGTATATAACCTCCAATATACTTATAAATATAGTTGGCAATGCAAGAGCAGATCAGACTTTCATCACAAGATGGACTTGAACCAACACCGGAGGCAGTTATTTGTGAACAAGTTTTGGGGAAACGATCAGGCTACACTAAAGGTCTTAGATGGAACATAAAACCTAATTTAGCTAGAGGTGCATCTTCCCCACAGTTTGAGGAAGATATTGGGACTAAGTATGAAAAGCTTGAGGCGGTGGTAACAACCTTACAGGAGGAAAATGCTATGTTAAGGTCACAATTTGCAAGTTTTCAAGATCAATTGGCTGAAATGACAAGACTACGTGCGCAACAAAGGCAAGGAGATGAACCCTCAAACAACTAG ATGGCGGGGTCAAGTCAAGATCGTGTAGCAGATGAATTAGTTCGAGAAGCTAACACTTTGGCTACAGATCCTGCGGTAGAGGCAGGTAGGACCCCCGCATCAGGTGATAATAGTATGTCTAAGACACATTTTGATGTGGACCTATCAAAGGGGGTTGTCAATAAGTTCATAAATCGACAAATACAAAATTCATTTAAAGAATATAGATCAGAATTGCATAAACACTACTGTAAGTTTGAGAATCCTCTGATTGCTCATGAAAACCCACCAGAAAGGATAGCTAATAAAGAAGATTGGGAGATTCTTTGTGATCGATGGGAGACTCTTGAATGGCAGGAAAAGAGGGAGAAGAACAAGAAATGTAGAGAATGTCTCAGCTTTAACCTTTTTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTGTAAAGTTGAAAAGGTTGGCCAAGTGAAATTATTTCACAAGAGTCATTTCTCAGAGAATGATGGGTGGGTAAACGATGCCGTCAAAGAAGCATACTTGGCAATGCAAGAGCAGATCAGACTTTCATCACAAGATGGACTTGAACCAACACCGGAGGCAGTTATTTGTGAACAAGTTTTGGGGAAACGATCAGGCTACACTAAAGGTCTTAGATGGAACATAAAACCTAATTTAGCTAGAGGTGCATCTTCCCCACAGTTTGAGGAAGATATTGGGACTAAGTATGAAAAGCTTGAGGCGGTGGTAACAACCTTACAGGAGGAAAATGCTATGTTAAGGTCACAATTTGCAAGTTTTCAAGATCAATTGGCTGAAATGACAAGACTACGTGCGCAACAAAGGCAAGGAGATGAACCCTCAAACAACTAG ATGGCGGGGTCAAGTCAAGATCGTGTAGCAGATGAATTAGTTCGAGAAGCTAACACTTTGGCTACAGATCCTGCGGTAGAGGCAGGTAGGACCCCCGCATCAGGTGATAATAGTATGTCTAAGACACATTTTGATGTGGACCTATCAAAGGGGGTTGTCAATAAGTTCATAAATCGACAAATACAAAATTCATTTAAAGAATATAGATCAGAATTGCATAAACACTACTGTAAGTTTGAGAATCCTCTGATTGCTCATGAAAACCCACCAGAAAGGATAGCTAATAAAGAAGATTGGGAGATTCTTTGTGATCGATGGGAGACTCTTGAATGGCAGGAAAAGAGGGAGAAGAACAAGAAATGTAGAGAATGTCTCAGCTTTAACCTTTTTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTGTAAAGTTGAAAAGGTTGGCCAAGTGAAATTATTTCACAAGAGTCATTTCTCAGAGAATGATGGGTGGGTAAACGATGCCGTCAAAGAAGCATACTTGGCAATGCAAGAGCAGATCAGACTTTCATCACAAGATGGACTTGAACCAACACCGGAGGCAGTTATTTGTGAACAAGTTTTGGGGAAACGATCAGGCTACACTAAAGGTCTTAGATGGAACATAAAACCTAATTTAGCTAGAGGTGCATCTTCCCCACAGTTTGAGGAAGATATTGGGACTAAGTATGAAAAGCTTGAGGCGGTGGTAACAACCTTACAGGAGGAAAATGCTATGTTAAGGTCACAATTTGCAAGTTTTCAAGATCAATTGGCTGAAATGACAAGACTACGTGCGCAACAAAGGCAAGGAGATGAACCCTCAAACAACTAG MAGSSQDRVADELVREANTLATDPAVEAGRTPASGDNSMSKTHFDVDLSKGVVNKFINRQIQNSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETLEWQEKREKNKKCRECLSFNLFVGQNPFFKCKMNCKVEKVGQVKLFHKSHFSENDGWVNDAVKEAYLAMQEQIRLSSQDGLEPTPEAVICEQVLGKRSGYTKGLRWNIKPNLARGASSPQFEEDIGTKYEKLEAVVTTLQEENAMLRSQFASFQDQLAEMTRLRAQQRQGDEPSNN
BLAST of Cla012380 vs. TrEMBL
Match: A5B8Q2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003315 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 9.0e-19 Identity = 62/186 (33.33%), Postives = 102/186 (54.84%), Query Frame = 1
BLAST of Cla012380 vs. TrEMBL
Match: A5BJF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030754 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09 Identity = 50/151 (33.11%), Postives = 80/151 (52.98%), Query Frame = 1
BLAST of Cla012380 vs. TrEMBL
Match: A0A0V0HVA0_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.5e-09 Identity = 55/222 (24.77%), Postives = 97/222 (43.69%), Query Frame = 1
BLAST of Cla012380 vs. TrEMBL
Match: J3LRF1_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08 Identity = 59/242 (24.38%), Postives = 110/242 (45.45%), Query Frame = 1
BLAST of Cla012380 vs. TrEMBL
Match: A0A0A0LM17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G294860 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07 Identity = 35/117 (29.91%), Postives = 59/117 (50.43%), Query Frame = 1
BLAST of Cla012380 vs. NCBI nr
Match: gi|731427383|ref|XP_010663961.1| (PREDICTED: uncharacterized protein LOC100261419 [Vitis vinifera]) HSP 1 Score: 124.4 bits (311), Expect = 3.2e-25 Identity = 78/242 (32.23%), Postives = 132/242 (54.55%), Query Frame = 1
BLAST of Cla012380 vs. NCBI nr
Match: gi|731401583|ref|XP_010654339.1| (PREDICTED: uncharacterized protein LOC100854636 [Vitis vinifera]) HSP 1 Score: 123.2 bits (308), Expect = 7.1e-25 Identity = 78/242 (32.23%), Postives = 132/242 (54.55%), Query Frame = 1
BLAST of Cla012380 vs. NCBI nr
Match: gi|731411132|ref|XP_010657852.1| (PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera]) HSP 1 Score: 110.5 bits (275), Expect = 4.7e-21 Identity = 62/178 (34.83%), Postives = 91/178 (51.12%), Query Frame = 1
BLAST of Cla012380 vs. NCBI nr
Match: gi|731417062|ref|XP_010660148.1| (PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera]) HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20 Identity = 76/240 (31.67%), Postives = 122/240 (50.83%), Query Frame = 1
BLAST of Cla012380 vs. NCBI nr
Match: gi|147861987|emb|CAN78763.1| (hypothetical protein VITISV_003315 [Vitis vinifera]) HSP 1 Score: 102.4 bits (254), Expect = 1.3e-18 Identity = 62/186 (33.33%), Postives = 102/186 (54.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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