Cla012358 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCCTCAATCGTTGCACTGCTTAAAAATGAAAAACTAACTGGTGAAAACTACATAACATGGAAATCTAACCTAAATACAATTCTGGTTATAGATGATCTACAATTTGTCTTAACGGAGGAGTGTCCTCCTATCCCCGCTTGTAATGCTTCCCAATATGTTAGGGATGCATATGACCGTTTGACAAAGGCCAATGACAAGGCCCGAGTCTATATCTTGACGAGTCTATCTGACGTACTCAACAAGAAACATGAGGCCATGATGAATGCACGACAGATCATGGAGTCCCTTCAGGAAATGTTTGGACAAAAGTCCTCACAAATCCGACACGAGGCCCTCAAGTACGTTTATAATGCACGTATGAAGGAAGACCAATTGGTGAGAGAACATGTTCTCGACCTGATGGTCCAATTCAACATTGCTGAAATGAACGACGCGGTCATTGACGAGCAGAGCCAGGTGTCTTTTATTCTAGAATCTCTTTCGAAGAGCTTTCTCCAATTCCGCAACAATGCTGTTATGAATAAAATTGTGTACACCATGCTTTGA ATGTCTTCCTCAATCGTTGCACTGCTTAAAAATGAAAAACTAACTGGTGAAAACTACATAACATGGAAATCTAACCTAAATACAATTCTGGTTATAGATGATCTACAATTTGTCTTAACGGAGGAGTGTCCTCCTATCCCCGCTTGTAATGCTTCCCAATATGTTAGGGATGCATATGACCGTTTGACAAAGGCCAATGACAAGGCCCGAGTCTATATCTTGACGAGTCTATCTGACGTACTCAACAAGAAACATGAGGCCATGATGAATGCACGACAGATCATGGAGTCCCTTCAGGAAATGTTTGGACAAAAGTCCTCACAAATCCGACACGAGGCCCTCAAGTACGTTTATAATGCACGTATGAAGGAAGACCAATTGGTGAGAGAACATGTTCTCGACCTGATGGTCCAATTCAACATTGCTGAAATGAACGACGCGGTCATTGACGAGCAGAGCCAGGTGTCTTTTATTCTAGAATCTCTTTCGAAGAGCTTTCTCCAATTCCGCAACAATGCTGTTATGAATAAAATTGTGTACACCATGCTTTGA ATGTCTTCCTCAATCGTTGCACTGCTTAAAAATGAAAAACTAACTGGTGAAAACTACATAACATGGAAATCTAACCTAAATACAATTCTGGTTATAGATGATCTACAATTTGTCTTAACGGAGGAGTGTCCTCCTATCCCCGCTTGTAATGCTTCCCAATATGTTAGGGATGCATATGACCGTTTGACAAAGGCCAATGACAAGGCCCGAGTCTATATCTTGACGAGTCTATCTGACGTACTCAACAAGAAACATGAGGCCATGATGAATGCACGACAGATCATGGAGTCCCTTCAGGAAATGTTTGGACAAAAGTCCTCACAAATCCGACACGAGGCCCTCAAGTACGTTTATAATGCACGTATGAAGGAAGACCAATTGGTGAGAGAACATGTTCTCGACCTGATGGTCCAATTCAACATTGCTGAAATGAACGACGCGGTCATTGACGAGCAGAGCCAGGTGTCTTTTATTCTAGAATCTCTTTCGAAGAGCTTTCTCCAATTCCGCAACAATGCTGTTATGAATAAAATTGTGTACACCATGCTTTGA MSSSIVALLKNEKLTGENYITWKSNLNTILVIDDLQFVLTEECPPIPACNASQYVRDAYDRLTKANDKARVYILTSLSDVLNKKHEAMMNARQIMESLQEMFGQKSSQIRHEALKYVYNARMKEDQLVREHVLDLMVQFNIAEMNDAVIDEQSQVSFILESLSKSFLQFRNNAVMNKIVYTML
BLAST of Cla012358 vs. TrEMBL
Match: E2GK51_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.0e-59 Identity = 116/182 (63.74%), Postives = 147/182 (80.77%), Query Frame = 1
BLAST of Cla012358 vs. TrEMBL
Match: E2GK52_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.0e-47 Identity = 97/164 (59.15%), Postives = 128/164 (78.05%), Query Frame = 1
BLAST of Cla012358 vs. TrEMBL
Match: W9SH28_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004989 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 8.3e-42 Identity = 90/177 (50.85%), Postives = 124/177 (70.06%), Query Frame = 1
BLAST of Cla012358 vs. TrEMBL
Match: W9S3Q9_9ROSA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Morus notabilis GN=L484_006475 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.4e-41 Identity = 91/177 (51.41%), Postives = 120/177 (67.80%), Query Frame = 1
BLAST of Cla012358 vs. TrEMBL
Match: W9RVT2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006473 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 6.0e-40 Identity = 89/177 (50.28%), Postives = 121/177 (68.36%), Query Frame = 1
BLAST of Cla012358 vs. NCBI nr
Match: gi|659113933|ref|XP_008456826.1| (PREDICTED: uncharacterized protein LOC103496664 [Cucumis melo]) HSP 1 Score: 241.1 bits (614), Expect = 1.5e-60 Identity = 115/182 (63.19%), Postives = 151/182 (82.97%), Query Frame = 1
BLAST of Cla012358 vs. NCBI nr
Match: gi|299474487|gb|ADJ18449.1| (gag/pol protein [Bryonia dioica]) HSP 1 Score: 236.9 bits (603), Expect = 2.8e-59 Identity = 116/182 (63.74%), Postives = 147/182 (80.77%), Query Frame = 1
BLAST of Cla012358 vs. NCBI nr
Match: gi|778697615|ref|XP_011654359.1| (PREDICTED: uncharacterized protein LOC105435361 [Cucumis sativus]) HSP 1 Score: 219.5 bits (558), Expect = 4.7e-54 Identity = 108/169 (63.91%), Postives = 136/169 (80.47%), Query Frame = 1
BLAST of Cla012358 vs. NCBI nr
Match: gi|659086056|ref|XP_008443743.1| (PREDICTED: uncharacterized protein LOC103487255, partial [Cucumis melo]) HSP 1 Score: 208.8 bits (530), Expect = 8.2e-51 Identity = 103/160 (64.38%), Postives = 124/160 (77.50%), Query Frame = 1
BLAST of Cla012358 vs. NCBI nr
Match: gi|659072276|ref|XP_008464721.1| (PREDICTED: uncharacterized protein LOC103502537 [Cucumis melo]) HSP 1 Score: 200.7 bits (509), Expect = 2.2e-48 Identity = 96/151 (63.58%), Postives = 121/151 (80.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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