Cla012348 (gene) Watermelon (97103) v1

Overview
NameCla012348
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionA_IG002N01.30 protein (Fragment) (AHRD V1 **-- O04624_ARATH); contains Interpro domain(s) IPR001578 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1
LocationChr8 : 3333148 .. 3334419 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACTTGTTTTTTTCGACCCTAATTCTTCAATCGCGATACCAGAGCCCCAAGCTTTTTCTGTACCATCAATGGCGAGGAATAGCGAAGGTTCGTCTCAAATGGGTTAAGAATCGGAGTCTCGATCACATCATCGACACGGAGACTGATTTGAAGGCCGCTTGCCTCCTTAAGGACGCCATTAAGCGCTCCTCTACTGGCTTCATCACCGCCAAATCCATCGCCGATTGGCAAAAGCTGCTCGGCCTCACCATCCCTGTTATTCGATTCATCCGGAGGTACCCAACTCTCTTTCACGAATTTCCTCATTCTCGTTACGCTAATTTGCCTTGCTTTCGTTTGACGGATACCGCACTGTTTTTAGATCAGCAAGAGAGTAATATACACCAAATTCACGAGAACGACACTGTCGAAAGACTTTGTAGAGTGCTTATGATGATGAAAACTAGGGCTATTCCTCTTCAATCCTTGCGTCCCTTAGAATGGGATCTTGGTCTACCATGTGGTTTTGAGAGGTCATTGATTCCTAGGTATCCGGATCATTTTCGATTAGTGAAGGCTTCCAATGGGGATTGGTGTCTCCGGCTTATGGAATGGCGCGAGGAATTTGCAGTTTCAGCCTTGCAAAGGAGCAATGAGAGCTCTGAATTGGGAGATACGTATAGGCAATTCAAAAGGGGGCATACCACATTGGCTTTTCCTATGAGTTTTCCGAGGGGATATGGAGCACAAAAGAAGGTAAAAGCTTGGATGGAAGAGTTTCAGAAGTTACCTTACATTTCTCCATACGAGAGTTGTAGGCAAATCGATCCCAAAAGTGACCTCATGGAGAAAAGAGTTGTTGGGGTTCTACATGAGCTTTTGAGTTTGACTCTTCACAAAAAAACTAAGAGAAACTACTTGAGAAGCTTGAGAGAGGAAATGAATCTCCCCCATAAGTTCACTCGAATCTTCACCCGGTATCCTGGAATATTCTATCTCTCCTTGAAGTGTAAGACTACCACTGTTTCTCTCAGGGAAGGGTATCAGCGGGGAAAGCTAGTGAACCCACATCCTTTGACATGTCTAAGGGAGAAGTTCTATCATGTTATGAAGACTGGACTGTTATATCGTGGGAAGGGTGCTGAATTGTTGGCGAAGGAGGGCATTTTGCTTAATAATACAGCCGAGGTGGTGGAGGATGGTTTGGATATTGAATCAGATGAGACAGGTGACGATGAATGTTTTGTGGACAACAACTCACAAGCAGAGGAATCTGATTTAGATTAA

mRNA sequence

ATGAAGAACTTGTTTTTTTCGACCCTAATTCTTCAATCGCGATACCAGAGCCCCAAGCTTTTTCTGTACCATCAATGGCGAGGAATAGCGAAGGTTCGTCTCAAATGGGTTAAGAATCGGAGTCTCGATCACATCATCGACACGGAGACTGATTTGAAGGCCGCTTGCCTCCTTAAGGACGCCATTAAGCGCTCCTCTACTGGCTTCATCACCGCCAAATCCATCGCCGATTGGCAAAAGCTGCTCGGCCTCACCATCCCTGTTATTCGATTCATCCGGAGGTACCCAACTCTCTTTCACGAATTTCCTCATTCTCGTTACGCTAATTTGCCTTGCTTTCGTTTGACGGATACCGCACTGTTTTTAGATCAGCAAGAGAGTAATATACACCAAATTCACGAGAACGACACTGTCGAAAGACTTTGTAGAGTGCTTATGATGATGAAAACTAGGGCTATTCCTCTTCAATCCTTGCGTCCCTTAGAATGGGATCTTGGTCTACCATGTGGTTTTGAGAGGTCATTGATTCCTAGGTATCCGGATCATTTTCGATTAGTGAAGGCTTCCAATGGGGATTGGTGTCTCCGGCTTATGGAATGGCGCGAGGAATTTGCAGTTTCAGCCTTGCAAAGGAGCAATGAGAGCTCTGAATTGGGAGATACGTATAGGCAATTCAAAAGGGGGCATACCACATTGGCTTTTCCTATGAGTTTTCCGAGGGGATATGGAGCACAAAAGAAGGTAAAAGCTTGGATGGAAGAGTTTCAGAAGTTACCTTACATTTCTCCATACGAGAGTTGTAGGCAAATCGATCCCAAAAGTGACCTCATGGAGAAAAGAGTTGTTGGGGTTCTACATGAGCTTTTGAGTTTGACTCTTCACAAAAAAACTAAGAGAAACTACTTGAGAAGCTTGAGAGAGGAAATGAATCTCCCCCATAAGTTCACTCGAATCTTCACCCGGTATCCTGGAATATTCTATCTCTCCTTGAAGTGTAAGACTACCACTGTTTCTCTCAGGGAAGGGTATCAGCGGGGAAAGCTAGTGAACCCACATCCTTTGACATGTCTAAGGGAGAAGTTCTATCATGTTATGAAGACTGGACTGTTATATCGTGGGAAGGGTGCTGAATTGTTGGCGAAGGAGGGCATTTTGCTTAATAATACAGCCGAGGTGGTGGAGGATGGTTTGGATATTGAATCAGATGAGACAGGTGACGATGAATGTTTTGTGGACAACAACTCACAAGCAGAGGAATCTGATTTAGATTAA

Coding sequence (CDS)

ATGAAGAACTTGTTTTTTTCGACCCTAATTCTTCAATCGCGATACCAGAGCCCCAAGCTTTTTCTGTACCATCAATGGCGAGGAATAGCGAAGGTTCGTCTCAAATGGGTTAAGAATCGGAGTCTCGATCACATCATCGACACGGAGACTGATTTGAAGGCCGCTTGCCTCCTTAAGGACGCCATTAAGCGCTCCTCTACTGGCTTCATCACCGCCAAATCCATCGCCGATTGGCAAAAGCTGCTCGGCCTCACCATCCCTGTTATTCGATTCATCCGGAGGTACCCAACTCTCTTTCACGAATTTCCTCATTCTCGTTACGCTAATTTGCCTTGCTTTCGTTTGACGGATACCGCACTGTTTTTAGATCAGCAAGAGAGTAATATACACCAAATTCACGAGAACGACACTGTCGAAAGACTTTGTAGAGTGCTTATGATGATGAAAACTAGGGCTATTCCTCTTCAATCCTTGCGTCCCTTAGAATGGGATCTTGGTCTACCATGTGGTTTTGAGAGGTCATTGATTCCTAGGTATCCGGATCATTTTCGATTAGTGAAGGCTTCCAATGGGGATTGGTGTCTCCGGCTTATGGAATGGCGCGAGGAATTTGCAGTTTCAGCCTTGCAAAGGAGCAATGAGAGCTCTGAATTGGGAGATACGTATAGGCAATTCAAAAGGGGGCATACCACATTGGCTTTTCCTATGAGTTTTCCGAGGGGATATGGAGCACAAAAGAAGGTAAAAGCTTGGATGGAAGAGTTTCAGAAGTTACCTTACATTTCTCCATACGAGAGTTGTAGGCAAATCGATCCCAAAAGTGACCTCATGGAGAAAAGAGTTGTTGGGGTTCTACATGAGCTTTTGAGTTTGACTCTTCACAAAAAAACTAAGAGAAACTACTTGAGAAGCTTGAGAGAGGAAATGAATCTCCCCCATAAGTTCACTCGAATCTTCACCCGGTATCCTGGAATATTCTATCTCTCCTTGAAGTGTAAGACTACCACTGTTTCTCTCAGGGAAGGGTATCAGCGGGGAAAGCTAGTGAACCCACATCCTTTGACATGTCTAAGGGAGAAGTTCTATCATGTTATGAAGACTGGACTGTTATATCGTGGGAAGGGTGCTGAATTGTTGGCGAAGGAGGGCATTTTGCTTAATAATACAGCCGAGGTGGTGGAGGATGGTTTGGATATTGAATCAGATGAGACAGGTGACGATGAATGTTTTGTGGACAACAACTCACAAGCAGAGGAATCTGATTTAGATTAA

Protein sequence

MKNLFFSTLILQSRYQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKDAIKRSSTGFITAKSIADWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDTALFLDQQESNIHQIHENDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPRYPDHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSFPRGYGAQKKVKAWMEEFQKLPYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLREKFYHVMKTGLLYRGKGAELLAKEGILLNNTAEVVEDGLDIESDETGDDECFVDNNSQAEESDLD
Homology
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BLAST of Cla012348 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.9e-29
Identity = 115/383 (30.03%), Postives = 173/383 (45.17%), Query Frame = 1 

Query: 37  VKNRSLDHIIDTETDLKAACLLKDAIKRSSTGFITAKSIADWQKLLGLTIPVIR---FIR 96
           V++   D+ ++ E  ++        I       I    +    + LGL         F+ 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 97  RYPTLFHEFPHSRYANLPCFRLTDTAL--FLDQQESNIHQIHENDTVERLCRVLMMMKTR 156
           ++P +F  + H     L C RLT  AL     + E+ + QI   D V RL +++MM  T 
Sbjct: 107 KFPHVFEIYEHPVQRILYC-RLTRKALDQIRHEHEAVLDQIP--DAVTRLRKLVMMSNTG 166

Query: 157 AIPLQSLRPLEWDLGLPCGFERSLIPRYPDHFRLVKASNG-DWCLRLMEWREEFAVSALQ 216
            I L+ +R    + GLP  FE S+I ++P  FRL+      D  + ++E     ++ A++
Sbjct: 167 RIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIE 226

Query: 217 RSNESSELGDTYRQ--FKRGHTTLAFPMSFPRGYGAQKKVKAWMEEFQKLPYISPYESCR 276
           R  E       YR           +F ++FP G+   K  +  + ++Q+LPY SPYE   
Sbjct: 227 RVREIE-----YRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDIS 286

Query: 277 QIDPKS----DLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREEMNLPHKFTRIFTRYPG 336
             D +S    + +EKR V  +HELLSLT+ KK     +   R  MNLP K      ++ G
Sbjct: 287 GYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 346

Query: 337 IFYLSLK---CKTTTVSLREGYQRGKLVNPHPLTCLREKFYHVMKTGLLYRGKGAELLAK 396
           IFY+S +    K  TV LREGY+RG+LV P+ +   R +               AEL+  
Sbjct: 347 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRL--------------AELVLM 406

Query: 397 EGILLNNTAEVV--EDGLDIESD 403
                   AE+V   DGLD E D
Sbjct: 407 SPRKAKVDAELVRYRDGLDDEDD 407

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BLAST of Cla012348 vs. TrEMBL
Match: A0A0A0KM36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218860 PE=4 SV=1)

HSP 1 Score: 783.1 bits (2021), Expect = 1.7e-223
Identity = 378/423 (89.36%), Postives = 396/423 (93.62%), Query Frame = 1 

Query: 1   MKNLFFSTLILQSRYQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKD 60
           M N FFS+LILQ R QSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLK+
Sbjct: 1   MNNKFFSSLILQYRCQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKN 60

Query: 61  AIKRSSTGFITAKSIADWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AIKRSSTGFITAKSIA+WQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFR+TDTAL
Sbjct: 61  AIKRSSTGFITAKSIANWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRMTDTAL 120

Query: 121 FLDQQESNIHQIHENDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPRYP 180
            LDQ+E +IHQ HE+DTVERLCRVLMMMKTR +PLQSLRPLEWDLGLPC FERSL+PRYP
Sbjct: 121 LLDQEEGSIHQFHESDTVERLCRVLMMMKTRTVPLQSLRPLEWDLGLPCDFERSLVPRYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSFPR 240
           DHFRLVKASNGDWCLRL EWREEFAVSALQRSNESS LGD YRQFK+G TTLAFP SFPR
Sbjct: 181 DHFRLVKASNGDWCLRLKEWREEFAVSALQRSNESSGLGDAYRQFKKGCTTLAFPQSFPR 240

Query: 241 GYGAQKKVKAWMEEFQKLPYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           GYGAQ KVKAWMEEFQKLPYISPYESCRQ+DP SDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQNKVKAWMEEFQKLPYISPYESCRQVDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLREK 360
           YLRSLREEM+LPHKFTRIFTRYPGIFYLSLKCKTTTVSL+EGYQRGKLV PHPLTCLREK
Sbjct: 301 YLRSLREEMDLPHKFTRIFTRYPGIFYLSLKCKTTTVSLKEGYQRGKLVTPHPLTCLREK 360

Query: 361 FYHVMKTGLLYRGKGAELLAKEGILLNNTAEVVEDGLDIESDETGDDECFVDNNSQAEES 420
           FYHVMKTGLLYRG+GA +L KEGILLNNT EVVEDG + ESDE GDDEC  D+NS+ EES
Sbjct: 361 FYHVMKTGLLYRGRGAAMLEKEGILLNNTVEVVEDGSNTESDEIGDDECLEDDNSRVEES 420

Query: 421 DLD 424
           D D
Sbjct: 421 DSD 423

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BLAST of Cla012348 vs. TrEMBL
Match: M5VU13_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020276mg PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 1.5e-179
Identity = 316/428 (73.83%), Postives = 357/428 (83.41%), Query Frame = 1 

Query: 1   MKNLFFSTLILQSRYQSPKLFLY--HQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLL 60
           M    FS L   +  +  KL L+  HQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLL
Sbjct: 1   MSTFLFSLLKPHTTSEPTKLLLHHHHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLL 60

Query: 61  KDAIKRSSTGFITAKSIADWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDT 120
           KDAIKRS TGF+TAKS ADWQKLLGLT+PV+RF+RRYPTLF EFPH+RYA+LPCF+LTDT
Sbjct: 61  KDAIKRSPTGFLTAKSFADWQKLLGLTVPVLRFMRRYPTLFQEFPHARYASLPCFKLTDT 120

Query: 121 ALFLDQQESNIHQIHENDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPR 180
           AL LD QE +IHQ HE+DTVERLCRVLMM K++ IPLQSL PL+WDLGLP GFE+ L+P+
Sbjct: 121 ALLLDSQEQSIHQTHESDTVERLCRVLMMTKSKTIPLQSLYPLKWDLGLPDGFEKVLVPK 180

Query: 181 YPDHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSF 240
           YPD FR++KASNG  CL++++W +E+AVS LQRS E  +LGD YRQFKRG T LAFPM+F
Sbjct: 181 YPDCFRIIKASNGIGCLKVIQWPKEYAVSELQRSKEGGDLGDEYRQFKRGQTVLAFPMNF 240

Query: 241 PRGYGAQKKVKAWMEEFQKLPYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTK 300
           P+GYG QKKV+ WMEEFQKLPYISPYE  R IDP SDLMEKRVVGVLHELLSLTLHKKTK
Sbjct: 241 PKGYGGQKKVRVWMEEFQKLPYISPYEDSRHIDPNSDLMEKRVVGVLHELLSLTLHKKTK 300

Query: 301 RNYLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLR 360
           RNYLRSLREE+NLPHKFTRIFTRYPGIFYLSLKCKTTTV+LREGYQRGKLVN HPLT +R
Sbjct: 301 RNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVALREGYQRGKLVNWHPLTRVR 360

Query: 361 EKFYHVMKTGLLYRGKGAELLAKEGILLNNTAEVVEDGLDIESDETG-DDECFVD--NNS 420
           EKFYHVM+TGLLYR KG  LL+ + ILL N+ E      + E DE G  DEC+ D  +N 
Sbjct: 361 EKFYHVMRTGLLYRSKGVHLLSPQEILL-NSVESESGPEESEEDEVGTGDECYEDEMSNL 420

Query: 421 QAEESDLD 424
            +E SD D
Sbjct: 421 DSEGSDED 427

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BLAST of Cla012348 vs. TrEMBL
Match: B9SYU8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0041300 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 4.6e-176
Identity = 305/405 (75.31%), Postives = 347/405 (85.68%), Query Frame = 1 

Query: 22  LYH---QWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKDAIKRSSTGFITAKSIADW 81
           LYH   Q R I KVRLKWVKNRSLDHIID ETDLKAACLLKDAIKRS TGF+TAKS+ADW
Sbjct: 27  LYHYFLQCRSIVKVRLKWVKNRSLDHIIDRETDLKAACLLKDAIKRSPTGFLTAKSVADW 86

Query: 82  QKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDTALFLDQQESNIHQIHENDTV 141
           QKLLGLT+PV+RF+RRYPTLF EFPH+RY NLPCFRLTDTAL LD QE +IHQ +E DTV
Sbjct: 87  QKLLGLTVPVLRFLRRYPTLFSEFPHARYTNLPCFRLTDTALLLDSQEQSIHQNYERDTV 146

Query: 142 ERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPRYPDHFRLVKASNGDWCLRLM 201
           ERLCR+LMMMK+R +PLQSL PL+WDLGLP  FER LIP++PD+F+ V+ASNG  CLRL 
Sbjct: 147 ERLCRLLMMMKSRTVPLQSLHPLKWDLGLPDNFERILIPKHPDYFQYVRASNGVGCLRLA 206

Query: 202 EWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSFPRGYGAQKKVKAWMEEFQKL 261
           +WREEFAVSALQRS+ES E+G+ Y+QFKRG TTLAFPMSFPRGYGAQKKV+AWMEEFQKL
Sbjct: 207 QWREEFAVSALQRSSESKEMGNKYQQFKRGQTTLAFPMSFPRGYGAQKKVRAWMEEFQKL 266

Query: 262 PYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREEMNLPHKFTRI 321
           PYISPYE  RQIDP S+LMEKRVVG+LHELLSLT+HKKTKRNYLRS+REE+ LPHKFTR+
Sbjct: 267 PYISPYEDSRQIDPNSELMEKRVVGLLHELLSLTIHKKTKRNYLRSVREELILPHKFTRL 326

Query: 322 FTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLREKFYHVMKTGLLYRGKGAEL 381
           FTRYPGIFYLSLKCKTTTV+LREGYQRGKLVNPHP+  LR+KFYHVM+TGLLYR KG   
Sbjct: 327 FTRYPGIFYLSLKCKTTTVALREGYQRGKLVNPHPIARLRDKFYHVMRTGLLYRNKGENA 386

Query: 382 LAKEGILLNNTAEVVEDGLDIESDETGDDECFVDNNSQAEESDLD 424
           + ++ +L +   E V D  + E DETGDD C+   +   + SD D
Sbjct: 387 IPQDILLNDVEDETVLDESEEEEDETGDD-CYEVTSESEDGSDED 430

[Close]
BLAST of Cla012348 vs. TrEMBL
Match: A0A061EWX3_THECC (Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_025005 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 1.3e-175
Identity = 299/400 (74.75%), Postives = 339/400 (84.75%), Query Frame = 1 

Query: 23  YHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKDAIKRSSTGFITAKSIADWQKLL 82
           + QWR I KVRLKWVKNRSLDH+IDTETDLKAACLLKDAIKRS TGF+TAKS ADWQKLL
Sbjct: 22  HQQWRSIVKVRLKWVKNRSLDHVIDTETDLKAACLLKDAIKRSPTGFLTAKSFADWQKLL 81

Query: 83  GLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDTALFLDQQESNIHQIHENDTVERLC 142
           GLT+PV+RF+RRYPTLF EFPH+RYANLPCFRLT TAL LD QE +IHQ HE+DT+ERLC
Sbjct: 82  GLTVPVLRFLRRYPTLFEEFPHARYANLPCFRLTGTALLLDSQEQSIHQAHESDTIERLC 141

Query: 143 RVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPRYPDHFRLVKASNGDWCLRLMEWRE 202
           R+LMMMK+R  PLQSL PL+WDLGLP  FE+ LIP++PDHFR VKA  G   +RL++WRE
Sbjct: 142 RLLMMMKSRTAPLQSLHPLKWDLGLPDNFEKVLIPKFPDHFRFVKAPIGVAAVRLVQWRE 201

Query: 203 EFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSFPRGYGAQKKVKAWMEEFQKLPYIS 262
           E AVSAL+RSNE  E+GD YRQFKRG TTLAF M+FPRGYGAQKKV+AWMEEFQKLPYIS
Sbjct: 202 ELAVSALERSNEVGEMGDEYRQFKRGQTTLAFLMNFPRGYGAQKKVRAWMEEFQKLPYIS 261

Query: 263 PYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREEMNLPHKFTRIFTRY 322
           PY+  R IDP S+LMEKR VGVLHE LSLT+HKKTKRNYLRSLREE+N+PHKFTR+FTRY
Sbjct: 262 PYDDSRHIDPNSELMEKRAVGVLHEFLSLTIHKKTKRNYLRSLREELNIPHKFTRLFTRY 321

Query: 323 PGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLREKFYHVMKTGLLYRGKGAELLAKE 382
           PGIFYLSLKCKTTTV+L+EGY+RGKLVNPHPL  LREKFYHVM+TGLLYRGKG  L+ +E
Sbjct: 322 PGIFYLSLKCKTTTVALKEGYRRGKLVNPHPLVRLREKFYHVMRTGLLYRGKGVNLIPRE 381

Query: 383 GILLNNTAEVVEDG---LDIESDETGDDECFVDNNSQAEE 420
            ILLN+    VEDG    + E  E G  + F +  S  E+
Sbjct: 382 DILLNDLENKVEDGEEEEETEEVEIGSGDEFYEETSDVED 421

[Close]
BLAST of Cla012348 vs. TrEMBL
Match: A0A067JGI0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03036 PE=4 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 1.7e-175
Identity = 308/405 (76.05%), Postives = 348/405 (85.93%), Query Frame = 1 

Query: 22  LYH---QWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKDAIKRSSTGFITAKSIADW 81
           LYH   Q R I KVRLKWVKNRSLDHIID ETDLKAACLLKDAIKRS TGF+TAKS+ADW
Sbjct: 31  LYHFLLQCRSIVKVRLKWVKNRSLDHIIDRETDLKAACLLKDAIKRSPTGFLTAKSVADW 90

Query: 82  QKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDTALFLDQQESNIHQIHENDTV 141
            KLLGLT+PV+RF+RRYPTLF EFPH+RYANLPCFRLTDTAL LD QE +IHQ +E+DTV
Sbjct: 91  HKLLGLTVPVLRFLRRYPTLFSEFPHARYANLPCFRLTDTALLLDSQEQSIHQNYESDTV 150

Query: 142 ERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPRYPDHFRLVKASNGDWCLRLM 201
           ERLCRVLMMMK+R +PLQSL PL+WDLGLP  FE+ LIP+YPDHF+  KASNG  CLRL+
Sbjct: 151 ERLCRVLMMMKSRTVPLQSLYPLKWDLGLPDNFEKILIPKYPDHFQFFKASNGFGCLRLV 210

Query: 202 EWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSFPRGYGAQKKVKAWMEEFQKL 261
           +WR+EFAVSALQRSNES E+G+ Y++FK+G TTLAFPMSFPRGYGAQKKV+AWMEEFQKL
Sbjct: 211 QWRDEFAVSALQRSNESKEMGNEYQKFKKGQTTLAFPMSFPRGYGAQKKVRAWMEEFQKL 270

Query: 262 PYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREEMNLPHKFTRI 321
           PYISPYE  RQIDP S+LMEKRVVGVLHELLSLT+HKKTKRNYLRSLREEM LPHKFTR+
Sbjct: 271 PYISPYEDSRQIDPNSELMEKRVVGVLHELLSLTIHKKTKRNYLRSLREEMILPHKFTRL 330

Query: 322 FTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLREKFYHVMKTGLLYRGKGAEL 381
           FTRYPGIFYLSLKCKTTTV+LREGYQRGKLVNPHPL  LR+KF++VM+TGLLYR KGA +
Sbjct: 331 FTRYPGIFYLSLKCKTTTVALREGYQRGKLVNPHPLARLRDKFHYVMRTGLLYRNKGANM 390

Query: 382 LAKEGILLNNTAEVVEDGLDIESDETG--DDECFVDNNSQAEESD 422
           +  E ILLN+  +  E G D   +E G  DD C+   +   + SD
Sbjct: 391 I-PEDILLNDAED--EIGTDESEEEEGETDDACYEVTSEIDDTSD 432

[Close]
BLAST of Cla012348 vs. NCBI nr
Match: gi|778701487|ref|XP_011655033.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 783.1 bits (2021), Expect = 2.4e-223
Identity = 378/423 (89.36%), Postives = 396/423 (93.62%), Query Frame = 1 

Query: 1   MKNLFFSTLILQSRYQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKD 60
           M N FFS+LILQ R QSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLK+
Sbjct: 1   MNNKFFSSLILQYRCQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKN 60

Query: 61  AIKRSSTGFITAKSIADWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AIKRSSTGFITAKSIA+WQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFR+TDTAL
Sbjct: 61  AIKRSSTGFITAKSIANWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRMTDTAL 120

Query: 121 FLDQQESNIHQIHENDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPRYP 180
            LDQ+E +IHQ HE+DTVERLCRVLMMMKTR +PLQSLRPLEWDLGLPC FERSL+PRYP
Sbjct: 121 LLDQEEGSIHQFHESDTVERLCRVLMMMKTRTVPLQSLRPLEWDLGLPCDFERSLVPRYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSFPR 240
           DHFRLVKASNGDWCLRL EWREEFAVSALQRSNESS LGD YRQFK+G TTLAFP SFPR
Sbjct: 181 DHFRLVKASNGDWCLRLKEWREEFAVSALQRSNESSGLGDAYRQFKKGCTTLAFPQSFPR 240

Query: 241 GYGAQKKVKAWMEEFQKLPYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           GYGAQ KVKAWMEEFQKLPYISPYESCRQ+DP SDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQNKVKAWMEEFQKLPYISPYESCRQVDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLREK 360
           YLRSLREEM+LPHKFTRIFTRYPGIFYLSLKCKTTTVSL+EGYQRGKLV PHPLTCLREK
Sbjct: 301 YLRSLREEMDLPHKFTRIFTRYPGIFYLSLKCKTTTVSLKEGYQRGKLVTPHPLTCLREK 360

Query: 361 FYHVMKTGLLYRGKGAELLAKEGILLNNTAEVVEDGLDIESDETGDDECFVDNNSQAEES 420
           FYHVMKTGLLYRG+GA +L KEGILLNNT EVVEDG + ESDE GDDEC  D+NS+ EES
Sbjct: 361 FYHVMKTGLLYRGRGAAMLEKEGILLNNTVEVVEDGSNTESDEIGDDECLEDDNSRVEES 420

Query: 421 DLD 424
           D D
Sbjct: 421 DSD 423

[Close]
BLAST of Cla012348 vs. NCBI nr
Match: gi|659114138|ref|XP_008456922.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 781.6 bits (2017), Expect = 7.1e-223
Identity = 379/423 (89.60%), Postives = 396/423 (93.62%), Query Frame = 1 

Query: 1   MKNLFFSTLILQSRYQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKD 60
           M NLFFS+LILQ+R QSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLK+
Sbjct: 1   MNNLFFSSLILQNRCQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKN 60

Query: 61  AIKRSSTGFITAKSIADWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AIKRSSTGFITAKSIA+WQKLLGLTIPVIRFIRRYPTLFHEFPHSRY NLPCFRLTDTAL
Sbjct: 61  AIKRSSTGFITAKSIANWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYTNLPCFRLTDTAL 120

Query: 121 FLDQQESNIHQIHENDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPRYP 180
            LDQ+ES+IHQ HE+DTVERLCRVLMMMKTR +PLQSLRPLEWDLGLPC FERSL+PRYP
Sbjct: 121 LLDQEESSIHQFHESDTVERLCRVLMMMKTRVLPLQSLRPLEWDLGLPCDFERSLVPRYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSFPR 240
           DHF+L KASNGDWCLRL EWREEFAVSALQRSNESS LGD YRQFKRG TTLAFP+SFPR
Sbjct: 181 DHFQLFKASNGDWCLRLKEWREEFAVSALQRSNESSGLGDAYRQFKRGCTTLAFPLSFPR 240

Query: 241 GYGAQKKVKAWMEEFQKLPYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           GYGAQ KVKAWMEEFQKLPYISPYESCRQIDP SDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQNKVKAWMEEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLREK 360
           YLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSL+EGY++GKLV PHPLTC+REK
Sbjct: 301 YLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLKEGYRQGKLVTPHPLTCVREK 360

Query: 361 FYHVMKTGLLYRGKGAELLAKEGILLNNTAEVVEDGLDIESDETGDDECFVDNNSQAEES 420
           FYHVMKTGLLYRGKGA LL KEGILLNNTAE  E G + ESDE GDDEC  D+NSQ EES
Sbjct: 361 FYHVMKTGLLYRGKGAALLEKEGILLNNTAEEAEGGSNTESDEIGDDECLEDDNSQLEES 420

Query: 421 DLD 424
           D D
Sbjct: 421 DSD 423

[Close]
BLAST of Cla012348 vs. NCBI nr
Match: gi|1009161405|ref|XP_015898879.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba])

HSP 1 Score: 657.5 bits (1695), Expect = 1.6e-185
Identity = 317/405 (78.27%), Postives = 358/405 (88.40%), Query Frame = 1 

Query: 17  SPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKDAIKRSSTGFITAKSIA 76
           +P L  +HQWRGIAKVRLKWV+NRSLDHIID ETDLKAA LLKDAIKRS TGF+TAKS A
Sbjct: 25  NPALHQHHQWRGIAKVRLKWVRNRSLDHIIDIETDLKAASLLKDAIKRSPTGFLTAKSFA 84

Query: 77  DWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDTALFLDQQESNIHQIHEND 136
           DWQKLLGLT+PV+RF+RRYPTLFHEFPH+RYANLPCF+LT+TAL LD QE +IHQ HEND
Sbjct: 85  DWQKLLGLTVPVLRFVRRYPTLFHEFPHTRYANLPCFKLTETALLLDSQEQSIHQTHEND 144

Query: 137 TVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPRYPDHFRLVKASNGDWCLR 196
           TVERLCR+LMM KTR +P QSL P++WDLGLP  FE++LIP+Y DHFRLVKASNG  CLR
Sbjct: 145 TVERLCRLLMMAKTRTLPFQSLYPMKWDLGLPDNFEKTLIPKYQDHFRLVKASNGSDCLR 204

Query: 197 LMEWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSFPRGYGAQKKVKAWMEEFQ 256
           L +WREEFAVSALQRSNE++E+GD YRQFKRG TTLAF MSFPRGYGAQKKVKAWMEEFQ
Sbjct: 205 LAKWREEFAVSALQRSNENAEVGDEYRQFKRGQTTLAFSMSFPRGYGAQKKVKAWMEEFQ 264

Query: 257 KLPYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREEMNLPHKFT 316
           KLPYISPYE+ R IDP S+LMEKRVVGVLHELLSLT+HKKTKRNYLRS+REE+NLPHKFT
Sbjct: 265 KLPYISPYENSRHIDPHSELMEKRVVGVLHELLSLTVHKKTKRNYLRSVREELNLPHKFT 324

Query: 317 RIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLREKFYHVMKTGLLYRGKGA 376
           RIFTRYPGIFYLSLKCKTTTV+L+EGYQRGKLVNPHPL  LREKFYHVM+TGLLYRGKG 
Sbjct: 325 RIFTRYPGIFYLSLKCKTTTVALKEGYQRGKLVNPHPLARLREKFYHVMRTGLLYRGKGV 384

Query: 377 ELLAKEGILLNNTAEVVEDGLDIESDETGDDECFVDNNSQAEESD 422
             L +E +LL + ++  E+  + E +ETG DEC+ +  S+ EESD
Sbjct: 385 NFLPQEDLLLKSASDEEEEEEEEEEEETG-DECY-EEISEVEESD 427

[Close]
BLAST of Cla012348 vs. NCBI nr
Match: gi|595812079|ref|XP_007203342.1| (hypothetical protein PRUPE_ppa020276mg [Prunus persica])

HSP 1 Score: 637.1 bits (1642), Expect = 2.2e-179
Identity = 316/428 (73.83%), Postives = 357/428 (83.41%), Query Frame = 1 

Query: 1   MKNLFFSTLILQSRYQSPKLFLY--HQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLL 60
           M    FS L   +  +  KL L+  HQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLL
Sbjct: 1   MSTFLFSLLKPHTTSEPTKLLLHHHHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLL 60

Query: 61  KDAIKRSSTGFITAKSIADWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRLTDT 120
           KDAIKRS TGF+TAKS ADWQKLLGLT+PV+RF+RRYPTLF EFPH+RYA+LPCF+LTDT
Sbjct: 61  KDAIKRSPTGFLTAKSFADWQKLLGLTVPVLRFMRRYPTLFQEFPHARYASLPCFKLTDT 120

Query: 121 ALFLDQQESNIHQIHENDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPR 180
           AL LD QE +IHQ HE+DTVERLCRVLMM K++ IPLQSL PL+WDLGLP GFE+ L+P+
Sbjct: 121 ALLLDSQEQSIHQTHESDTVERLCRVLMMTKSKTIPLQSLYPLKWDLGLPDGFEKVLVPK 180

Query: 181 YPDHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFPMSF 240
           YPD FR++KASNG  CL++++W +E+AVS LQRS E  +LGD YRQFKRG T LAFPM+F
Sbjct: 181 YPDCFRIIKASNGIGCLKVIQWPKEYAVSELQRSKEGGDLGDEYRQFKRGQTVLAFPMNF 240

Query: 241 PRGYGAQKKVKAWMEEFQKLPYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHKKTK 300
           P+GYG QKKV+ WMEEFQKLPYISPYE  R IDP SDLMEKRVVGVLHELLSLTLHKKTK
Sbjct: 241 PKGYGGQKKVRVWMEEFQKLPYISPYEDSRHIDPNSDLMEKRVVGVLHELLSLTLHKKTK 300

Query: 301 RNYLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTCLR 360
           RNYLRSLREE+NLPHKFTRIFTRYPGIFYLSLKCKTTTV+LREGYQRGKLVN HPLT +R
Sbjct: 301 RNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVALREGYQRGKLVNWHPLTRVR 360

Query: 361 EKFYHVMKTGLLYRGKGAELLAKEGILLNNTAEVVEDGLDIESDETG-DDECFVD--NNS 420
           EKFYHVM+TGLLYR KG  LL+ + ILL N+ E      + E DE G  DEC+ D  +N 
Sbjct: 361 EKFYHVMRTGLLYRSKGVHLLSPQEILL-NSVESESGPEESEEDEVGTGDECYEDEMSNL 420

Query: 421 QAEESDLD 424
            +E SD D
Sbjct: 421 DSEGSDED 427

[Close]
BLAST of Cla012348 vs. NCBI nr
Match: gi|657958819|ref|XP_008370947.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Malus domestica])

HSP 1 Score: 637.1 bits (1642), Expect = 2.2e-179
Identity = 318/431 (73.78%), Postives = 358/431 (83.06%), Query Frame = 1 

Query: 1   MKNLFFSTLILQSRYQSPKLFL-----YHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAA 60
           MK   FS L  Q+   SP   L     +HQ RGI KVRLKWVKNRS+DH+I+TETDLKAA
Sbjct: 1   MKAFIFSLLKPQTPSSSPTNLLLLLHRHHQRRGITKVRLKWVKNRSIDHVIETETDLKAA 60

Query: 61  CLLKDAIKRSSTGFITAKSIADWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRL 120
           CLLKDAIKRS TGF+TAKS ADWQKLLGLT+PV+RF+RRYPTLF EFPH+RYANLPCF+L
Sbjct: 61  CLLKDAIKRSPTGFLTAKSFADWQKLLGLTVPVLRFLRRYPTLFQEFPHARYANLPCFKL 120

Query: 121 TDTALFLDQQESNIHQIHENDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSL 180
           TDTAL LD QE +IH+ HE+DTVERLCRVLMM K++ +PLQSL PL+WDLGLP GFE+ L
Sbjct: 121 TDTALLLDSQEQSIHKTHESDTVERLCRVLMMTKSKTLPLQSLYPLKWDLGLPDGFEKVL 180

Query: 181 IPRYPDHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDTYRQFKRGHTTLAFP 240
           +P+YPD FR+VKASNG  CL+ ++W +E+AVS LQRS E  +LGD YRQFKRG T LAFP
Sbjct: 181 VPKYPDCFRIVKASNGVGCLKAIQWPKEYAVSELQRSREVGDLGDEYRQFKRGQTLLAFP 240

Query: 241 MSFPRGYGAQKKVKAWMEEFQKLPYISPYESCRQIDPKSDLMEKRVVGVLHELLSLTLHK 300
           M+FPRGYG QKKV+AWMEEFQKLPYISPYE  R IDPKSDLMEKRVVGVLHE LSLTLHK
Sbjct: 241 MNFPRGYGGQKKVRAWMEEFQKLPYISPYEDSRHIDPKSDLMEKRVVGVLHEFLSLTLHK 300

Query: 301 KTKRNYLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLT 360
           KTKRNYLRSLREE+NLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGY RGKLVNPHPLT
Sbjct: 301 KTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYHRGKLVNPHPLT 360

Query: 361 CLREKFYHVMKTGLLYRGKGAELLAKEGILLNNTAEVVEDGLDIESDETG-DDECFVD-- 420
            LREKFY+VM+TGLLYRGKG  +L+ E ILL N+ E      + E +ETG  DEC  D  
Sbjct: 361 SLREKFYYVMRTGLLYRGKGVNMLSPEXILL-NSMESESGQEESEEEETGTGDECHEDEV 420

Query: 421 NNSQAEESDLD 424
           +NS +E SD D
Sbjct: 421 SNSDSEASDED 430

The following BLAST results are available for this feature:
BLAST of Cla012348 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPD1_ARATH1.9e-2930.03Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
BLAST of Cla012348 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM36_CUCSA1.7e-22389.36Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218860 PE=4 SV=1[more]
M5VU13_PRUPE1.5e-17973.83Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020276mg PE=4 SV=1[more]
B9SYU8_RICCO4.6e-17675.31Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0041300 PE=4 SV=1[more]
A0A061EWX3_THECC1.3e-17574.75Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_0... [more]
A0A067JGI0_JATCU1.7e-17576.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03036 PE=4 SV=1[more]
BLAST of Cla012348 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778701487|ref|XP_011655033.1|2.4e-22389.36PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|659114138|ref|XP_008456922.1|7.1e-22389.60PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|1009161405|ref|XP_015898879.1|1.6e-18578.27PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba][more]
gi|595812079|ref|XP_007203342.1|2.2e-17973.83hypothetical protein PRUPE_ppa020276mg [Prunus persica][more]
gi|657958819|ref|XP_008370947.1|2.2e-17973.78PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012348Cla012348.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 37..368
score: 2.3E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 25..423
score: 1.7E
NoneNo IPR availablePANTHERPTHR31476:SF10SUBFAMILY NOT NAMEDcoord: 25..423
score: 1.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla012348Cla97C08G146200Watermelon (97103) v2wmwmbB101
Cla012348ClCG08G002150Watermelon (Charleston Gray)wcgwmB401
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla012348Cucurbita maxima (Rimu)cmawmB016