Cla012285 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGTTTAAAGAAACAGTACGACGCATTATTAGAGATGTTAAGTCAGTCGGGGTTTGGGTGGAACGAGGAGTTCAAATGTGTCAGGTTCGGGTAAGATTCTAGAAAAAAAAATATGCTGGTATGTGTTATTATAGAAATATTAATAATGTTTATGTGTATTAATGCATAGTCATCCCAGTGTGAAAGGGATATGGAACAAGCTATTCCCCCATTATGATGACCTCTCGTATCTGGGAAAAGACAGAGCAATAGGACAATTAAGTGAGGACCCATACGTGATGGCAACGAATGCATTCAAAGAGTTTGAAGATGAGATTCGACTTGAATCACAGGATTGTCACACACCTGAGGTTTACCAGACATAATCTCCATTAAATCAAGATGGACCCAATGAAGAGTCAGCAGAGCAATCTACAGGTAGAGTGAGTGTACCTGTCGAGTCATCTCGAGGCAGCAAGAGGAAGAGGTCATCATCATGCTGAAATGATGGACATCATGAGATCAATTATTGAAATGCAGAACACACACATGGGTAGACTTGCAACATGCCAGAAGAAAAAGTATAAGTTGGAGTTTGGGCATCGGAAGAAAGTAGTGAACGCCATATACAACATTGATGGCTTGAATAAGGATGATCAGGTCACCCTTATTGACCTCCTTATCACAGACATTCAGAAGACAGATTGCTTCCTTGCAGTACCAGAACACGCACAGAAGAGGTACTATCTTCGTCTACTAGGACGAAACATGTAG ATGAGGAGTTTAAAGAAACAGTACGACGCATTATTAGAGATGTTAAGTCAGTCGGGGTTTGGGTGGAACGAGGAGTTCAAATGTGTCAGGTTCGGTCATCCCAGTGTGAAAGGGATATGGAACAAGCTATTCCCCCATTATGATGACCTCTCGTATCTGGGAAAAGACAGAGCAATAGGACAATTAAGTGAGGACCCATACGTGATGGCAACGAATGCATTCAAAGAGTTTGAAGATGAGATTCGACTTGAATCACAGGATTGTCACACACCTGAGGCAGCAAGAGGAAGAGGTCATCATCATGCTGAAATGATGGACATCATGAGATCAATTATTGAAATGCAGAACACACACATGGGTAGACTTGCAACATGCCAGAAGAAAAAGTATAAGTTGGAGTTTGGGCATCGGAAGAAAGTAGTGAACGCCATATACAACATTGATGGCTTGAATAAGGATGATCAGGTCACCCTTATTGACCTCCTTATCACAGACATTCAGAAGACAGATTGCTTCCTTGCAGTACCAGAACACGCACAGAAGAGGTACTATCTTCGTCTACTAGGACGAAACATGTAG ATGAGGAGTTTAAAGAAACAGTACGACGCATTATTAGAGATGTTAAGTCAGTCGGGGTTTGGGTGGAACGAGGAGTTCAAATGTGTCAGGTTCGGTCATCCCAGTGTGAAAGGGATATGGAACAAGCTATTCCCCCATTATGATGACCTCTCGTATCTGGGAAAAGACAGAGCAATAGGACAATTAAGTGAGGACCCATACGTGATGGCAACGAATGCATTCAAAGAGTTTGAAGATGAGATTCGACTTGAATCACAGGATTGTCACACACCTGAGGCAGCAAGAGGAAGAGGTCATCATCATGCTGAAATGATGGACATCATGAGATCAATTATTGAAATGCAGAACACACACATGGGTAGACTTGCAACATGCCAGAAGAAAAAGTATAAGTTGGAGTTTGGGCATCGGAAGAAAGTAGTGAACGCCATATACAACATTGATGGCTTGAATAAGGATGATCAGGTCACCCTTATTGACCTCCTTATCACAGACATTCAGAAGACAGATTGCTTCCTTGCAGTACCAGAACACGCACAGAAGAGGTACTATCTTCGTCTACTAGGACGAAACATGTAG MRSLKKQYDALLEMLSQSGFGWNEEFKCVRFGHPSVKGIWNKLFPHYDDLSYLGKDRAIGQLSEDPYVMATNAFKEFEDEIRLESQDCHTPEAARGRGHHHAEMMDIMRSIIEMQNTHMGRLATCQKKKYKLEFGHRKKVVNAIYNIDGLNKDDQVTLIDLLITDIQKTDCFLAVPEHAQKRYYLRLLGRNM
BLAST of Cla012285 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.1e-07 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1
BLAST of Cla012285 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17 Identity = 70/228 (30.70%), Postives = 108/228 (47.37%), Query Frame = 1
BLAST of Cla012285 vs. NCBI nr
Match: gi|764568427|ref|XP_011462325.1| (PREDICTED: uncharacterized protein At2g29880-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11 Identity = 63/227 (27.75%), Postives = 103/227 (45.37%), Query Frame = 1
BLAST of Cla012285 vs. NCBI nr
Match: gi|659111565|ref|XP_008455793.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-10 Identity = 47/105 (44.76%), Postives = 61/105 (58.10%), Query Frame = 1
BLAST of Cla012285 vs. NCBI nr
Match: gi|1021039058|gb|KZM96839.1| (hypothetical protein DCAR_015799 [Daucus carota subsp. sativus]) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 62/227 (27.31%), Postives = 106/227 (46.70%), Query Frame = 1
BLAST of Cla012285 vs. NCBI nr
Match: gi|731360972|ref|XP_010692107.1| (PREDICTED: uncharacterized protein LOC104905313 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 69.3 bits (168), Expect = 8.2e-09 Identity = 62/238 (26.05%), Postives = 102/238 (42.86%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |