Cla012237 (gene) Watermelon (97103) v1

Overview
NameCla012237
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEthylene-responsive transcription factor 1 (AHRD V1 *-** ERF1_ORYSJ); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
LocationChr6 : 19875056 .. 19875836 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAAGTTTAAGAAATTTAGAGGCGTTAGGCAACGTCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCTTTATTGTAATTAATTACAATTTGCCAACTTTTTTAGTTGTGATTATGTTTTTTGATAGTTAATTTTCGTATCTAATGAAACCCTCTAGTTGTGTTTTGTATTTTGATGATTATTTGATGACATGCATGCATGCAGGAAGAGAAGGATATGGCTCGGGACGTTTGAGACGGCGGAGGAAGCAGCAAAAGCGTACGACCAAGCTGCGGTTTTGATGAGCGGTCGGAATGCGAAAACCAATTTCCCTACAACTCCTCCCAATGGAGACACCAACAACGTTATTACGACGAACAAGGATTCACCAAAGTGTTTGTCTGAAATATTACAAGCTAAGCTCAAGAAATGTTGTCGTACTCCATCGCCGTCGATGACATGCTTGAGGCTCGACACCGAGAATTCGAATATCGGTGTGTGGCAGAAGCGTGCCGGGCAACGGTCAACATCCAACTGGGTTATGACCGTTGAGCTAGGAAACAAGAAGAGCCATAATAACGACAACGACAATGCAGATTCTCCTATGACGATGGCTGTGGTTGCTTCAGATCATCAGTCTCCGATGGCGGTTGCGGAAGTGGCGGAGATTCCATCCGAGTTGGATGAAGAAGAGAAAATGCTAGCATTGCAAATGGTGGAGGAATTGCTTGACATCAACTCTGATCCTAATGAGCCATTTGAGATTCAACAAGGAAAGGATATTAATTATCTTTAG

mRNA sequence

ATGCCCAAGTTTAAGAAATTTAGAGGCGTTAGGCAACGTCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCTTTATTGAAGAGAAGGATATGGCTCGGGACGTTTGAGACGGCGGAGGAAGCAGCAAAAGCGTACGACCAAGCTGCGGTTTTGATGAGCGGTCGGAATGCGAAAACCAATTTCCCTACAACTCCTCCCAATGGAGACACCAACAACGTTATTACGACGAACAAGGATTCACCAAAGTGTTTGTCTGAAATATTACAAGCTAAGCTCAAGAAATGTTGTCGTACTCCATCGCCGTCGATGACATGCTTGAGGCTCGACACCGAGAATTCGAATATCGGTGTGTGGCAGAAGCGTGCCGGGCAACGGTCAACATCCAACTGGGTTATGACCGTTGAGCTAGGAAACAAGAAGAGCCATAATAACGACAACGACAATGCAGATTCTCCTATGACGATGGCTGTGGTTGCTTCAGATCATCAGTCTCCGATGGCGGTTGCGGAAGTGGCGGAGATTCCATCCGAGTTGGATGAAGAAGAGAAAATGCTAGCATTGCAAATGGTGGAGGAATTGCTTGACATCAACTCTGATCCTAATGAGCCATTTGAGATTCAACAAGGAAAGGATATTAATTATCTTTAG

Coding sequence (CDS)

ATGCCCAAGTTTAAGAAATTTAGAGGCGTTAGGCAACGTCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCTTTATTGAAGAGAAGGATATGGCTCGGGACGTTTGAGACGGCGGAGGAAGCAGCAAAAGCGTACGACCAAGCTGCGGTTTTGATGAGCGGTCGGAATGCGAAAACCAATTTCCCTACAACTCCTCCCAATGGAGACACCAACAACGTTATTACGACGAACAAGGATTCACCAAAGTGTTTGTCTGAAATATTACAAGCTAAGCTCAAGAAATGTTGTCGTACTCCATCGCCGTCGATGACATGCTTGAGGCTCGACACCGAGAATTCGAATATCGGTGTGTGGCAGAAGCGTGCCGGGCAACGGTCAACATCCAACTGGGTTATGACCGTTGAGCTAGGAAACAAGAAGAGCCATAATAACGACAACGACAATGCAGATTCTCCTATGACGATGGCTGTGGTTGCTTCAGATCATCAGTCTCCGATGGCGGTTGCGGAAGTGGCGGAGATTCCATCCGAGTTGGATGAAGAAGAGAAAATGCTAGCATTGCAAATGGTGGAGGAATTGCTTGACATCAACTCTGATCCTAATGAGCCATTTGAGATTCAACAAGGAAAGGATATTAATTATCTTTAG

Protein sequence

MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPTTPPNGDTNNVITTNKDSPKCLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDHQSPMAVAEVAEIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKDINYL
Homology
[Close]
BLAST of Cla012237 vs. Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.8e-58
Identity = 120/207 (57.97%), Postives = 142/207 (68.60%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWV+EIRHPLLKRRIWLGTFETAEEAA+AYD+AAVLMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPTTPPN-GDTNNVIT--------TNKDSPKCLSEILQAKLKKCCRTPSPSMTCLRLDT 120
           NFP    N G+T+   T        ++  S   LS IL AKL+KCC++PSPS+TCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ENSNIGVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDHQSPMAVAE 180
            +S+IGVWQKRAG +S S+WVMTVELG   S       A     +A        P    E
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILA--------PTTEVE 180

Query: 181 VAEIPSELDEEEKMLALQMVEELLDIN 199
           +     E+ +EE+ +ALQM+EELL+ N
Sbjct: 181 IGGSREEVLDEEEKVALQMIEELLNTN 199

[Close]
BLAST of Cla012237 vs. Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.5e-51
Identity = 102/192 (53.12%), Postives = 131/192 (68.23%), Query Frame = 1 

Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
           KKFRGVRQR WGSWVSEIRHPLLKRR+WLGTF+TAE AA+AYDQAAVLM+G++AKTNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 65  TPPNGDTNNVITTNKDSPKCLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVWQKRAG 124
              NG  +  I +   SPK LSE+L AKL+K C+  +P +TCLRLD ++S+IGVWQKRAG
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 125 QRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDHQSPMAVAEVAEIPSELDEEEK 184
            +++ NWV  VELG+K +     D   + M                   ++ +E  +E+ 
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKM-------------------KVRNEDVQEDD 177

Query: 185 MLALQMVEELLD 197
            +A+QM+EELL+
Sbjct: 185 QMAMQMIEELLN 177

[Close]
BLAST of Cla012237 vs. Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.7e-51
Identity = 103/194 (53.09%), Postives = 136/194 (70.10%), Query Frame = 1 

Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
           +KFRGVRQR WGSWVSEIRHPLLKRR+WLGTFETAE AA+AYDQAA+LM+G+NAKTNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 65  TPPNGDTNNVITTNKD--SPKCLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVWQKR 124
                 +++V   N    SPK LSE+L AKL+K C+  +PS+TCLRLDT++S+IGVWQKR
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 125 AGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDHQSPMAVAEVAEIPSELDEE 184
           AG +++  WVM +ELGN  +        +S + + +   + Q+   V +  E    +  +
Sbjct: 125 AGSKTSPTWVMRLELGNVVN--------ESAVDLGLTTMNKQN---VEKEEEEEEAIISD 184

Query: 185 EKMLALQMVEELLD 197
           E  LA++M+EELL+
Sbjct: 185 EDQLAMEMIEELLN 187

[Close]
BLAST of Cla012237 vs. Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.9e-26
Identity = 62/92 (67.39%), Postives = 67/92 (72.83%), Query Frame = 1 

Query: 5  KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
          ++FRGVRQRHWGSWVSEIRHPLLK RIWLGTFETAE+AA+AYD+AA LM G  A+TNFP 
Sbjct: 6  QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 65 TPPNGDTNNVITTNKDSPKCLSEILQAKLKKC 97
           P      N I T+  S K LS  L AKL KC
Sbjct: 66 NP------NAIPTS--SSKLLSATLTAKLHKC 89

[Close]
BLAST of Cla012237 vs. Swiss-Prot
Match: PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.5e-22
Identity = 52/92 (56.52%), Postives = 61/92 (66.30%), Query Frame = 1 

Query: 5  KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
          +++RG RQRHWGSWVSEIRH +LK RIW GTFE+AE+AA+AYD+AA LM G  A+TNFP 
Sbjct: 6  QRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPY 65

Query: 65 TPPNGDTNNVITTNKDSPKCLSEILQAKLKKC 97
           P          +   S K LS  L AKL +C
Sbjct: 66 NPN--------ASQSSSSKLLSATLIAKLHRC 89

[Close]
BLAST of Cla012237 vs. TrEMBL
Match: A0A0A0LZE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G340430 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.5e-95
Identity = 189/224 (84.38%), Postives = 199/224 (88.84%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVL+SGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLISGRNAKT 60

Query: 61  NFPTTPP-NGDT-NNVITTNKDSPKCLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGV 120
           NFPT+   NG+T NN++TT KDSPK LSEILQAKLKKCCRTPS SMTCLRLDTENSNIGV
Sbjct: 61  NFPTSSSSNGETINNIVTTAKDSPKGLSEILQAKLKKCCRTPSRSMTCLRLDTENSNIGV 120

Query: 121 WQKRAGQRSTSNWVMTVELGNKKSHNNDND-----NADSPMTMAVVASDHQSPMA-VAEV 180
           WQKRAGQ+STSNWVMTVELGNKK  +N+N+     NADS M MA VASDHQSP+  V EV
Sbjct: 121 WQKRAGQQSTSNWVMTVELGNKKRVSNENESENDNNADSHM-MADVASDHQSPVVEVVEV 180

Query: 181 AEIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKDINYL 217
           AEIPSELDEEEKMLALQMVEEL  IN DP EPFEIQQGKDINYL
Sbjct: 181 AEIPSELDEEEKMLALQMVEELPYINFDPAEPFEIQQGKDINYL 223

[Close]
BLAST of Cla012237 vs. TrEMBL
Match: A0A0L9TRJ0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g258800 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.8e-65
Identity = 139/226 (61.50%), Postives = 170/226 (75.22%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWVSEIRHPLLKRR+WLGTFETAEEAA+AYDQAA+LMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFP-TTPPNGDTNNVITTNKDSP----KCLSEILQAKLKKCCRTPSPSMTCLRLDTENSN 120
           NFP T  P GD  ++  T++D+P    K L EIL AKL+KC + PSPSMTCLRLDTENS+
Sbjct: 61  NFPITQTPEGDPKSI--TSEDTPSSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSH 120

Query: 121 IGVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDH-----QSPMAVA 180
           IGVWQKRAG+RS SNWVMTV+LG KKS +N+   ADS  ++++ +SDH     +SP  V 
Sbjct: 121 IGVWQKRAGRRSDSNWVMTVQLG-KKSTDNETHQADSSTSLSLPSSDHHHHHRESPSGVT 180

Query: 181 ----EVAEIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKD 213
                   +  E+DEEE+ +ALQM+EELL+  + P+  F   Q +D
Sbjct: 181 GHHQHEEVVRGEIDEEER-IALQMIEELLNDRNCPSPSFSNFQERD 222

[Close]
BLAST of Cla012237 vs. TrEMBL
Match: A0A0S3R755_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G434000 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.8e-65
Identity = 139/226 (61.50%), Postives = 170/226 (75.22%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWVSEIRHPLLKRR+WLGTFETAEEAA+AYDQAA+LMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFP-TTPPNGDTNNVITTNKDSP----KCLSEILQAKLKKCCRTPSPSMTCLRLDTENSN 120
           NFP T  P GD  ++  T++D+P    K L EIL AKL+KC + PSPSMTCLRLDTENS+
Sbjct: 61  NFPITQTPEGDPKSI--TSEDTPSSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSH 120

Query: 121 IGVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDH-----QSPMAVA 180
           IGVWQKRAG+RS SNWVMTV+LG KKS +N+   ADS  ++++ +SDH     +SP  V 
Sbjct: 121 IGVWQKRAGRRSDSNWVMTVQLG-KKSTDNETHQADSSTSLSLPSSDHHHHHRESPSGVT 180

Query: 181 ----EVAEIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKD 213
                   +  E+DEEE+ +ALQM+EELL+  + P+  F   Q +D
Sbjct: 181 GHHQHEEVVRGEIDEEER-IALQMIEELLNDRNCPSPSFSNFQERD 222

[Close]
BLAST of Cla012237 vs. TrEMBL
Match: A0A151SLP4_CAJCA (Ethylene-responsive transcription factor WIN1 OS=Cajanus cajan GN=KK1_001919 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.4e-64
Identity = 136/208 (65.38%), Postives = 163/208 (78.37%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWVSEIRHPLLKRR+WLGTFETAEEAA+AYDQAA+LMSGRNAKT
Sbjct: 1   MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFP-TTPPNGDTNNVITTNKDSP---KCLSEILQAKLKKCCRTPSPSMTCLRLDTENSNI 120
           NFP T  P GD  +  TT+++SP   K L EIL AKL+KC + PSPSMTCLRLDTENS+I
Sbjct: 61  NFPITQTPEGDPKS--TTSEESPSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHI 120

Query: 121 GVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASD--HQSPMAVAEVAE 180
           GVWQKRAG+RS SNWVMTV+LG KKS NN+N+   +  T +   SD  H+SP        
Sbjct: 121 GVWQKRAGRRSDSNWVMTVQLG-KKSANNENETLRAD-TSSFPCSDLHHESPSVTGHKEV 180

Query: 181 IPSELDEEEKMLALQMVEELLDINSDPN 203
           + +E+DEEE+ +ALQM+EELL+  + P+
Sbjct: 181 VATEIDEEER-IALQMIEELLNDRNCPS 203

[Close]
BLAST of Cla012237 vs. TrEMBL
Match: B9SET1_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0224000 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.1e-64
Identity = 137/226 (60.62%), Postives = 163/226 (72.12%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAA+AYDQAA+LMSGRNAKT
Sbjct: 1   MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFP-TTPPNGD-------------TNNVITTNKDSPKCLSEILQAKLKKCCRTPSPSMTC 120
           NFP T  PNGD             +++  T    +P  LSEIL AKL+KC +TPSPSMTC
Sbjct: 61  NFPITQTPNGDPKSSTADSSTTATSSSKNTATTTAPNGLSEILHAKLRKCSKTPSPSMTC 120

Query: 121 LRLDTENSNIGVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDHQSP 180
           LRLDTENS+IGVWQKRAGQRS SNWVMTV+LG +   N++      PM         +S 
Sbjct: 121 LRLDTENSHIGVWQKRAGQRSDSNWVMTVQLGKQ---NHEVSEGTFPMA--------ESS 180

Query: 181 MAVAEVAEIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKD 213
             +    E+ +++DEEE+ +ALQM+EELL+ N  P+ PFE+Q G D
Sbjct: 181 NTLPGPPELRTQMDEEER-IALQMIEELLNRNC-PSPPFEVQDGDD 213

[Close]
BLAST of Cla012237 vs. NCBI nr
Match: gi|659086562|ref|XP_008443999.1| (PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 8.1e-98
Identity = 192/223 (86.10%), Postives = 200/223 (89.69%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AAKAYDQAAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPTTPPNGDT-NNVITTNKDSPKCLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW 120
           NFPT+  NG+T NN+ TT KDSPK LSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW
Sbjct: 61  NFPTSSSNGETINNIDTTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 QKRAGQRSTSNWVMTVELGNKKSHNNDND-----NADSPMTMAVVASD-HQSPMAVAEVA 180
           QKRAGQ+STSNWVMTVELGNKK  +N+N+     NADS M MAVVASD HQSP  V EVA
Sbjct: 121 QKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDM-MAVVASDHHQSP--VVEVA 180

Query: 181 EIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKDINYL 217
           EIPSELDEEEKMLALQMVEELL IN DP EPFEIQQGKDINYL
Sbjct: 181 EIPSELDEEEKMLALQMVEELLHINFDPAEPFEIQQGKDINYL 220

[Close]
BLAST of Cla012237 vs. NCBI nr
Match: gi|449466695|ref|XP_004151061.1| (PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 2.2e-95
Identity = 189/224 (84.38%), Postives = 199/224 (88.84%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVL+SGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLISGRNAKT 60

Query: 61  NFPTTPP-NGDT-NNVITTNKDSPKCLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGV 120
           NFPT+   NG+T NN++TT KDSPK LSEILQAKLKKCCRTPS SMTCLRLDTENSNIGV
Sbjct: 61  NFPTSSSSNGETINNIVTTAKDSPKGLSEILQAKLKKCCRTPSRSMTCLRLDTENSNIGV 120

Query: 121 WQKRAGQRSTSNWVMTVELGNKKSHNNDND-----NADSPMTMAVVASDHQSPMA-VAEV 180
           WQKRAGQ+STSNWVMTVELGNKK  +N+N+     NADS M MA VASDHQSP+  V EV
Sbjct: 121 WQKRAGQQSTSNWVMTVELGNKKRVSNENESENDNNADSHM-MADVASDHQSPVVEVVEV 180

Query: 181 AEIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKDINYL 217
           AEIPSELDEEEKMLALQMVEEL  IN DP EPFEIQQGKDINYL
Sbjct: 181 AEIPSELDEEEKMLALQMVEELPYINFDPAEPFEIQQGKDINYL 223

[Close]
BLAST of Cla012237 vs. NCBI nr
Match: gi|920689049|gb|KOM33032.1| (hypothetical protein LR48_Vigan01g258800 [Vigna angularis])

HSP 1 Score: 255.8 bits (652), Expect = 6.9e-65
Identity = 139/226 (61.50%), Postives = 170/226 (75.22%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWVSEIRHPLLKRR+WLGTFETAEEAA+AYDQAA+LMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFP-TTPPNGDTNNVITTNKDSP----KCLSEILQAKLKKCCRTPSPSMTCLRLDTENSN 120
           NFP T  P GD  ++  T++D+P    K L EIL AKL+KC + PSPSMTCLRLDTENS+
Sbjct: 61  NFPITQTPEGDPKSI--TSEDTPSSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSH 120

Query: 121 IGVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDH-----QSPMAVA 180
           IGVWQKRAG+RS SNWVMTV+LG KKS +N+   ADS  ++++ +SDH     +SP  V 
Sbjct: 121 IGVWQKRAGRRSDSNWVMTVQLG-KKSTDNETHQADSSTSLSLPSSDHHHHHRESPSGVT 180

Query: 181 ----EVAEIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKD 213
                   +  E+DEEE+ +ALQM+EELL+  + P+  F   Q +D
Sbjct: 181 GHHQHEEVVRGEIDEEER-IALQMIEELLNDRNCPSPSFSNFQERD 222

[Close]
BLAST of Cla012237 vs. NCBI nr
Match: gi|1012344503|gb|KYP55695.1| (Ethylene-responsive transcription factor WIN1 [Cajanus cajan])

HSP 1 Score: 253.4 bits (646), Expect = 3.4e-64
Identity = 136/208 (65.38%), Postives = 163/208 (78.37%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWVSEIRHPLLKRR+WLGTFETAEEAA+AYDQAA+LMSGRNAKT
Sbjct: 1   MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFP-TTPPNGDTNNVITTNKDSP---KCLSEILQAKLKKCCRTPSPSMTCLRLDTENSNI 120
           NFP T  P GD  +  TT+++SP   K L EIL AKL+KC + PSPSMTCLRLDTENS+I
Sbjct: 61  NFPITQTPEGDPKS--TTSEESPSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHI 120

Query: 121 GVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASD--HQSPMAVAEVAE 180
           GVWQKRAG+RS SNWVMTV+LG KKS NN+N+   +  T +   SD  H+SP        
Sbjct: 121 GVWQKRAGRRSDSNWVMTVQLG-KKSANNENETLRAD-TSSFPCSDLHHESPSVTGHKEV 180

Query: 181 IPSELDEEEKMLALQMVEELLDINSDPN 203
           + +E+DEEE+ +ALQM+EELL+  + P+
Sbjct: 181 VATEIDEEER-IALQMIEELLNDRNCPS 203

[Close]
BLAST of Cla012237 vs. NCBI nr
Match: gi|951006370|ref|XP_014508448.1| (PREDICTED: ethylene-responsive transcription factor WIN1-like [Vigna radiata var. radiata])

HSP 1 Score: 252.3 bits (643), Expect = 7.7e-64
Identity = 138/227 (60.79%), Postives = 170/227 (74.89%), Query Frame = 1 

Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWVSEIRHPLLKRR+WLGTFETAEEAA+AYDQAA+LMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFP-TTPPNGDTNNVITTNKDSP----KCLSEILQAKLKKCCRTPSPSMTCLRLDTENSN 120
           NFP T  P GD  ++  T++D+P    K L EIL AKL+KC + PSPSMTCLRLDTENS+
Sbjct: 61  NFPITQTPEGDPKSI--TSEDTPSSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSH 120

Query: 121 IGVWQKRAGQRSTSNWVMTVELGNKKSHNNDNDNADSPMTMAVVASDH------QSPMAV 180
           IGVWQKRAG+RS SNWVMTV+LG KKS +N+   ADS  ++++ +SD+      +SP  V
Sbjct: 121 IGVWQKRAGRRSDSNWVMTVQLG-KKSTDNETRQADSSTSLSLPSSDNHHHHHRESPSGV 180

Query: 181 A----EVAEIPSELDEEEKMLALQMVEELLDINSDPNEPFEIQQGKD 213
                    +  E+DEEE+ +ALQM+EELL+  + P+  F   Q +D
Sbjct: 181 TGHQHHEEVVRGEIDEEER-IALQMIEELLNDRNCPSPSFSNIQERD 223

The following BLAST results are available for this feature:
BLAST of Cla012237 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WIN1_ARATH2.8e-5857.97Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE... [more]
SHN3_ARATH7.5e-5153.13Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3... [more]
SHN2_ARATH9.7e-5153.09Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2... [more]
ERF03_ARATH4.9e-2667.39Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF00... [more]
PZ02_LUPPO9.5e-2256.52Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1[more]
BLAST of Cla012237 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZE1_CUCSA1.5e-9584.38Uncharacterized protein OS=Cucumis sativus GN=Csa_1G340430 PE=4 SV=1[more]
A0A0L9TRJ0_PHAAN4.8e-6561.50Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g258800 PE=4 SV=1[more]
A0A0S3R755_PHAAN4.8e-6561.50Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G434000 PE=... [more]
A0A151SLP4_CAJCA2.4e-6465.38Ethylene-responsive transcription factor WIN1 OS=Cajanus cajan GN=KK1_001919 PE=... [more]
B9SET1_RICCO9.1e-6460.62DNA binding protein, putative OS=Ricinus communis GN=RCOM_0224000 PE=4 SV=1[more]
BLAST of Cla012237 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086562|ref|XP_008443999.1|8.1e-9886.10PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo][more]
gi|449466695|ref|XP_004151061.1|2.2e-9584.38PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis sativus][more]
gi|920689049|gb|KOM33032.1|6.9e-6561.50hypothetical protein LR48_Vigan01g258800 [Vigna angularis][more]
gi|1012344503|gb|KYP55695.1|3.4e-6465.38Ethylene-responsive transcription factor WIN1 [Cajanus cajan][more]
gi|951006370|ref|XP_014508448.1|7.7e-6460.79PREDICTED: ethylene-responsive transcription factor WIN1-like [Vigna radiata var... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010143 cutin biosynthetic process
biological_process GO:0009414 response to water deprivation
biological_process GO:0010166 wax metabolic process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012237Cla012237.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 29..45
score: 2.4E-10coord: 7..18
score: 2.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 6..64
score: 2.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 6..50
score: 1.7
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 6..69
score: 4.3
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 6..63
score: 21
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 6..64
score: 4.32
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..147
score: 2.2
NoneNo IPR availablePANTHERPTHR31194:SF12SUBFAMILY NOT NAMEDcoord: 1..147
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla012237Cla97C07G139480Watermelon (97103) v2wmwmbB415
Cla012237Cla97C11G209540Watermelon (97103) v2wmwmbB390
Cla012237Cla97C05G098050Watermelon (97103) v2wmwmbB403
Cla012237Cla97C06G120370Watermelon (97103) v2wmwmbB406
Cla012237Csa2G006270Cucumber (Chinese Long) v2cuwmB168
Cla012237Csa4G004960Cucumber (Chinese Long) v2cuwmB356
Cla012237Csa3G878210Cucumber (Chinese Long) v2cuwmB280
Cla012237Csa1G340430Cucumber (Chinese Long) v2cuwmB081
Cla012237MELO3C003695Melon (DHL92) v3.5.1mewmB389
Cla012237MELO3C010341Melon (DHL92) v3.5.1mewmB293
Cla012237MELO3C004503Melon (DHL92) v3.5.1mewmB439
Cla012237MELO3C017888Melon (DHL92) v3.5.1mewmB549
Cla012237ClCG11G003080Watermelon (Charleston Gray)wcgwmB111
Cla012237ClCG07G012670Watermelon (Charleston Gray)wcgwmB396
Cla012237ClCG06G011180Watermelon (Charleston Gray)wcgwmB344
Cla012237ClCG05G016930Watermelon (Charleston Gray)wcgwmB312
Cla012237CSPI02G01740Wild cucumber (PI 183967)cpiwmB171
Cla012237CSPI01G18970Wild cucumber (PI 183967)cpiwmB088
Cla012237CSPI03G43980Wild cucumber (PI 183967)cpiwmB283
Cla012237Cucsa.096450Cucumber (Gy14) v1cgywmB121
Cla012237Cucsa.310360Cucumber (Gy14) v1cgywmB574
Cla012237Cucsa.132120Cucumber (Gy14) v1cgywmB225
Cla012237Cucsa.292670Cucumber (Gy14) v1cgywmB537
Cla012237CmaCh01G015020Cucurbita maxima (Rimu)cmawmB466
Cla012237CmaCh11G005470Cucurbita maxima (Rimu)cmawmB143
Cla012237CmaCh09G004610Cucurbita maxima (Rimu)cmawmB041
Cla012237CmaCh05G012930Cucurbita maxima (Rimu)cmawmB775
Cla012237CmoCh11G005450Cucurbita moschata (Rifu)cmowmB128
Cla012237CmoCh09G004700Cucurbita moschata (Rifu)cmowmB033
Cla012237Lsi04G021330Bottle gourd (USVL1VR-Ls)lsiwmB342
Cla012237Lsi11G003200Bottle gourd (USVL1VR-Ls)lsiwmB120
Cla012237Lsi06G009690Bottle gourd (USVL1VR-Ls)lsiwmB415
Cla012237Lsi07G004650Bottle gourd (USVL1VR-Ls)lsiwmB461
Cla012237Cp4.1LG06g03420Cucurbita pepo (Zucchini)cpewmB779
Cla012237Cp4.1LG04g09380Cucurbita pepo (Zucchini)cpewmB679
Cla012237Cp4.1LG11g10640Cucurbita pepo (Zucchini)cpewmB128
Cla012237CsGy4G001410Cucumber (Gy14) v2cgybwmB332
Cla012237CsGy3G041470Cucumber (Gy14) v2cgybwmB264
Cla012237CsGy2G001760Cucumber (Gy14) v2cgybwmB161
Cla012237CsGy1G018900Cucumber (Gy14) v2cgybwmB081
Cla012237MELO3C010341.2Melon (DHL92) v3.6.1medwmB288
Cla012237MELO3C003695.2Melon (DHL92) v3.6.1medwmB382
Cla012237MELO3C004503.2Melon (DHL92) v3.6.1medwmB425
Cla012237MELO3C017888.2Melon (DHL92) v3.6.1medwmB535
Cla012237Carg02885Silver-seed gourdcarwmB0636
Cla012237Carg10907Silver-seed gourdcarwmB0570
Cla012237Carg12130Silver-seed gourdcarwmB0042
Cla012237CsaV3_2G002900Cucumber (Chinese Long) v3cucwmB180
Cla012237CsaV3_1G030200Cucumber (Chinese Long) v3cucwmB093
Cla012237CsaV3_3G046440Cucumber (Chinese Long) v3cucwmB290
Cla012237CsaV3_4G001520Cucumber (Chinese Long) v3cucwmB373
Cla012237Bhi06G001695Wax gourdwgowmB152
Cla012237Bhi02G000828Wax gourdwgowmB684
Cla012237Bhi09G001934Wax gourdwgowmB648
Cla012237Bhi01G002760Wax gourdwgowmB240
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla012237Cla012711Watermelon (97103) v1wmwmB115
Cla012237Cla020969Watermelon (97103) v1wmwmB139
Cla012237Cla016704Watermelon (97103) v1wmwmB165
The following block(s) are covering this gene:
GeneOrganismBlock
Cla012237Cucurbita maxima (Rimu)cmawmB071
Cla012237Cucurbita maxima (Rimu)cmawmB182
Cla012237Cucurbita moschata (Rifu)cmowmB063
Cla012237Cucurbita moschata (Rifu)cmowmB170
Cla012237Cucurbita moschata (Rifu)cmowmB769
Cla012237Cucurbita pepo (Zucchini)cpewmB372
Cla012237Cucurbita pepo (Zucchini)cpewmB819
Cla012237Silver-seed gourdcarwmB0126
Cla012237Silver-seed gourdcarwmB0245