Cla012137 (gene) Watermelon (97103) v1

NameCla012137
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionShort-chain dehydrogenase/reductase family protein (AHRD V1 **-- D7MVC8_ARALL); contains Interpro domain(s) IPR002198 Short-chain dehydrogenase/reductase SDR
LocationChr4 : 15741777 .. 15742559 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGCCGCCACGCTTCCGTTAGACGGCCGAACTGCAATCGTCACCGGCGCCTCCCGCGGCATTGGCCGCGCCATCGCTGTCCACCTCCACTCCCTCGGCGCAAACCTCGTCATCAACTACGCTTCCAACTCAACACAAGCGGATCTCCTCGCATCGGAGCTCAACCAGTTATCGGCGCCGCTCCGGCGAGCCGTAACTGTCCAGGCCGACGTGTCAGACCCAGATCAGGTAAAACGGCTGTTCGATTCGGCCGAAAAGGAGTTTGGATCTGAGATTCACATACTCGTAAACTCCGCCGGGATTCTCGATTCGAAGTACCCGACTTTGGCTGGAACCGCCGTGGAGGATTGGGATGAGGCGTTTCGAGTGAATTGCAGAGGCGCGTTTTTGGTCTGTAAAGAGGCGTCGAATCGGCTCAGGCGCGGCGGCGGAGGGCGGATTGTGTTGATTACGACGTCGATAGTTGGGTCTCTGCCGCCAGGGTACGGTGCCTATGCGGCGTCGAAGGCGGCGGTGGAGGCCATGGCGAAGACTGCAGCGAAAGAGCTTAAGGGGACTGGAATTACGGTCAACTGCGTGGCGCCGGGACCGGTGGCGACGGAGCTTTTTTACGCCGGAAAATCAGAGGATACGGTGGCGAAGATGGCGGAGGCCTGCCCGCTAGGGCGCCTCGGTCAGCCCGACGACGTGGCGAAAGTGGTGGGATTTTTGGCTACTGATGAGGGTGGGTGGGTCAACGGGCAGGTGGTTCGAGTCAACGGAGGGTCTGTAATTTGA

mRNA sequence

ATGGCCGCCGCCGCCACGCTTCCGTTAGACGGCCGAACTGCAATCGTCACCGGCGCCTCCCGCGGCATTGGCCGCGCCATCGCTGTCCACCTCCACTCCCTCGGCGCAAACCTCGTCATCAACTACGCTTCCAACTCAACACAAGCGGATCTCCTCGCATCGGAGCTCAACCAGTTATCGGCGCCGCTCCGGCGAGCCGTAACTGTCCAGGCCGACGTGTCAGACCCAGATCAGGTAAAACGGCTGTTCGATTCGGCCGAAAAGGAGTTTGGATCTGAGATTCACATACTCGTAAACTCCGCCGGGATTCTCGATTCGAAGTACCCGACTTTGGCTGGAACCGCCGTGGAGGATTGGGATGAGGCGTTTCGAGTGAATTGCAGAGGCGCGTTTTTGGTCTGTAAAGAGGCGTCGAATCGGCTCAGGCGCGGCGGCGGAGGGCGGATTGTGTTGATTACGACGTCGATAGTTGGGTCTCTGCCGCCAGGGTACGGTGCCTATGCGGCGTCGAAGGCGGCGGTGGAGGCCATGGCGAAGACTGCAGCGAAAGAGCTTAAGGGGACTGGAATTACGGTCAACTGCGTGGCGCCGGGACCGGTGGCGACGGAGCTTTTTTACGCCGGAAAATCAGAGGATACGGTGGCGAAGATGGCGGAGGCCTGCCCGCTAGGGCGCCTCGGTCAGCCCGACGACGTGGCGAAAGTGGTGGGATTTTTGGCTACTGATGAGGGTGGGTGGGTCAACGGGCAGGTGGTTCGAGTCAACGGAGGGTCTGTAATTTGA

Coding sequence (CDS)

ATGGCCGCCGCCGCCACGCTTCCGTTAGACGGCCGAACTGCAATCGTCACCGGCGCCTCCCGCGGCATTGGCCGCGCCATCGCTGTCCACCTCCACTCCCTCGGCGCAAACCTCGTCATCAACTACGCTTCCAACTCAACACAAGCGGATCTCCTCGCATCGGAGCTCAACCAGTTATCGGCGCCGCTCCGGCGAGCCGTAACTGTCCAGGCCGACGTGTCAGACCCAGATCAGGTAAAACGGCTGTTCGATTCGGCCGAAAAGGAGTTTGGATCTGAGATTCACATACTCGTAAACTCCGCCGGGATTCTCGATTCGAAGTACCCGACTTTGGCTGGAACCGCCGTGGAGGATTGGGATGAGGCGTTTCGAGTGAATTGCAGAGGCGCGTTTTTGGTCTGTAAAGAGGCGTCGAATCGGCTCAGGCGCGGCGGCGGAGGGCGGATTGTGTTGATTACGACGTCGATAGTTGGGTCTCTGCCGCCAGGGTACGGTGCCTATGCGGCGTCGAAGGCGGCGGTGGAGGCCATGGCGAAGACTGCAGCGAAAGAGCTTAAGGGGACTGGAATTACGGTCAACTGCGTGGCGCCGGGACCGGTGGCGACGGAGCTTTTTTACGCCGGAAAATCAGAGGATACGGTGGCGAAGATGGCGGAGGCCTGCCCGCTAGGGCGCCTCGGTCAGCCCGACGACGTGGCGAAAGTGGTGGGATTTTTGGCTACTGATGAGGGTGGGTGGGTCAACGGGCAGGTGGTTCGAGTCAACGGAGGGTCTGTAATTTGA

Protein sequence

MAAAATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAPLRRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEAFRVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTAAKELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATDEGGWVNGQVVRVNGGSVI
BLAST of Cla012137 vs. Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.1e-75
Identity = 148/256 (57.81%), Postives = 189/256 (73.83%), Query Frame = 1

Query: 7   LPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAPLR-- 66
           LPL GR AIVTGASRGIGR IA+++   GA +VI+Y+SN   A+ +AS +N  S      
Sbjct: 17  LPLGGRVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINNKSPSSGDG 76

Query: 67  -RAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEAF 126
            RA+  +ADV++P QV +LFD+AE  FG  +HI+VN+AG+ DSKYPTLA T+ E+WD  F
Sbjct: 77  VRAIVCKADVAEPSQVAQLFDTAEHAFGP-LHIVVNNAGVTDSKYPTLAQTSDEEWDRIF 136

Query: 127 RVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTAAK 186
           +VNC+GAFL  +EA+ R+ RGGGGRI+ I++S+V    P YGAY ASKAAVE M +  A+
Sbjct: 137 QVNCKGAFLCSREAAKRVVRGGGGRIINISSSLVAMPIPRYGAYTASKAAVEMMTRILAQ 196

Query: 187 ELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATDE 246
           EL+GT IT NCVAPGPVAT++F+AGKSE  V    ++ P  RLG+ +DVA +V FLA+DE
Sbjct: 197 ELRGTQITANCVAPGPVATDMFFAGKSEAAVEAGVKSNPFERLGKVEDVAPLVAFLASDE 256

Query: 247 GGWVNGQVVRVNGGSV 260
           G WVN QVVRVNGG V
Sbjct: 257 GEWVNAQVVRVNGGQV 271

BLAST of Cla012137 vs. Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3)

HSP 1 Score: 169.1 bits (427), Expect = 6.4e-41
Identity = 94/252 (37.30%), Postives = 152/252 (60.32%), Query Frame = 1

Query: 9   LDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAPLRRAVT 68
           L+ +TAIVTGASRGIGR+IA+ L   GAN+V+NY+ N  +A+ +  E+  +    R+A+ 
Sbjct: 2   LNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMG---RKAIA 61

Query: 69  VQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEAFRVNCR 128
           V+ADVS+P+ V+ +       F S I ILVN+AGI  ++   +     ++WD+   +N +
Sbjct: 62  VKADVSNPEDVQNMIKETLSVF-STIDILVNNAGI--TRDNLIMRMKEDEWDDVININLK 121

Query: 129 GAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTAAKELKGT 188
           G F   K  + ++ +   GRI+ +++ +  S  PG   Y A+KA V  + K++AKEL   
Sbjct: 122 GVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASR 181

Query: 189 GITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATDEGGWVN 248
            ITVN +APG ++T++     ++D   +M +  PL R G+P DV+ VV FLA++   ++ 
Sbjct: 182 NITVNAIAPGFISTDM-TDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASEGARYMT 241

Query: 249 GQVVRVNGGSVI 261
           GQ + ++GG V+
Sbjct: 242 GQTLHIDGGMVM 246

BLAST of Cla012137 vs. Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcU PE=3 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 103/272 (37.87%), Postives = 153/272 (56.25%), Query Frame = 1

Query: 1   MAAAATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLS 60
           M+++    LDG+ A+VTGA RGIG AIAV L   GA +V+NYA++   A+ +  E+    
Sbjct: 1   MSSSDNYRLDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNG 60

Query: 61  APLRRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWD 120
           +    A+++QADV DPD V +L D A + FG  + I+ ++AGI+   +  +     +++D
Sbjct: 61  SD---AISIQADVGDPDAVTKLMDQAVEHFG-YLDIVSSNAGIV--SFGHVKDVTPDEFD 120

Query: 121 EAFRVNCRGAFLVCKEASNRLRRGGGGRIVLI---TTSIVGSLPPGYGAYAASKAAVEAM 180
             FRVN RG F V +EA   LR   GGRI+L    T S+ G   P +  Y+ SK A++  
Sbjct: 121 RVFRVNTRGQFFVAREAYRHLRE--GGRIILTSSNTASVKG--VPRHAVYSGSKGAIDTF 180

Query: 181 AKTAAKELKGTGITVNCVAPGPVATELF------YAGKSEDTVAKMAEAC-----PLGRL 240
            +  A +     ITVN VAPG + T++F      Y    E    +  + C     PL R+
Sbjct: 181 VRCLAIDCGDKKITVNAVAPGAIKTDMFLSVSREYIPNGETFTDEQVDECAAWLSPLNRV 240

Query: 241 GQPDDVAKVVGFLATDEGGWVNGQVVRVNGGS 259
           G P DVA+VV FLA+D   W++G+++ V+GG+
Sbjct: 241 GLPVDVARVVSFLASDAAEWISGKIIGVDGGA 262

BLAST of Cla012137 vs. Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.9e-39
Identity = 95/247 (38.46%), Postives = 146/247 (59.11%), Query Frame = 1

Query: 12  RTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAPLRRAVTVQA 71
           ++A+VTGASRGIGR+IA+ L   G N+ +NYA +  +A+ +  E+         +  +QA
Sbjct: 3   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGV---ESFAIQA 62

Query: 72  DVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEAFRVNCRGAF 131
           +V+  D+VK +      +FGS + +LVN+AGI  +K   L     ++WD+    N +G F
Sbjct: 63  NVAKGDEVKEMIKEVVSQFGS-VDVLVNNAGI--TKDNLLMRMKEQEWDDVIDTNLKGVF 122

Query: 132 LVCKEASNRLRRGGGGRIVLITTSIVGSLP-PGYGAYAASKAAVEAMAKTAAKELKGTGI 191
              ++ + ++ R   G I+ +T SIVG++  PG   Y A+KA V  + KTAA+EL   GI
Sbjct: 123 NCIQKVTPQMLRQRSGAIINLT-SIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGI 182

Query: 192 TVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATDEGGWVNGQ 251
           TVN VAPG + +++  A  S+D   +M E  PL R G+  D+A  V FLA+D+  ++ GQ
Sbjct: 183 TVNAVAPGFIVSDMTNA-LSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQ 241

Query: 252 VVRVNGG 258
            + VNGG
Sbjct: 243 TIHVNGG 241

BLAST of Cla012137 vs. Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.9e-39
Identity = 95/247 (38.46%), Postives = 146/247 (59.11%), Query Frame = 1

Query: 12  RTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAPLRRAVTVQA 71
           ++A+VTGASRGIGR+IA+ L   G N+ +NYA +  +A+ +  E+         +  +QA
Sbjct: 3   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGV---ESFAIQA 62

Query: 72  DVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEAFRVNCRGAF 131
           +V+  D+VK +      +FGS + +LVN+AGI  +K   L     ++WD+    N +G F
Sbjct: 63  NVAKGDEVKEMIKEVVSQFGS-VDVLVNNAGI--TKDNLLMRMKEQEWDDVIDTNLKGVF 122

Query: 132 LVCKEASNRLRRGGGGRIVLITTSIVGSLP-PGYGAYAASKAAVEAMAKTAAKELKGTGI 191
              ++ + ++ R   G I+ +T SIVG++  PG   Y A+KA V  + KTAA+EL   GI
Sbjct: 123 NCIQKVTPQMLRQRSGAIINLT-SIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGI 182

Query: 192 TVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATDEGGWVNGQ 251
           TVN VAPG + +++  A  S+D   +M E  PL R G+  D+A  V FLA+D+  ++ GQ
Sbjct: 183 TVNAVAPGFIVSDMTNA-LSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQ 241

Query: 252 VVRVNGG 258
            + VNGG
Sbjct: 243 TIHVNGG 241

BLAST of Cla012137 vs. TrEMBL
Match: A0A0A0L1D5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192180 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 2.7e-126
Identity = 232/257 (90.27%), Postives = 241/257 (93.77%), Query Frame = 1

Query: 4   AATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAPL 63
           A  LPLDGRTAIVTGASRGIGRAIA+HLHSLGANLV+NYASNSTQADLLASELNQ SAPL
Sbjct: 2   ATALPLDGRTAIVTGASRGIGRAIAIHLHSLGANLVLNYASNSTQADLLASELNQSSAPL 61

Query: 64  RRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEAF 123
           RRAV VQADVSDPD VKRLFDSAEKEFGSEIHILVNSAGILDSKYP+L  T VEDWDE F
Sbjct: 62  RRAVAVQADVSDPDHVKRLFDSAEKEFGSEIHILVNSAGILDSKYPSLVETTVEDWDETF 121

Query: 124 RVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTAAK 183
           RVNCRGAFLVCKEA NR++RGGGGRIVLITTSIV SLPPGYGAYAASKAAVEAMAK AAK
Sbjct: 122 RVNCRGAFLVCKEAENRIKRGGGGRIVLITTSIVLSLPPGYGAYAASKAAVEAMAKIAAK 181

Query: 184 ELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATDE 243
           ELKGTGITVNCVAPGPVATELFYAGKSE+TVA+MAEACP+GRLGQPDD+AKVVGFL TD 
Sbjct: 182 ELKGTGITVNCVAPGPVATELFYAGKSEETVARMAEACPMGRLGQPDDLAKVVGFLVTDA 241

Query: 244 GGWVNGQVVRVNGGSVI 261
           G WVNGQVVRVNGG VI
Sbjct: 242 GEWVNGQVVRVNGGLVI 258

BLAST of Cla012137 vs. TrEMBL
Match: A0A164XV52_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_016868 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.9e-100
Identity = 184/258 (71.32%), Postives = 218/258 (84.50%), Query Frame = 1

Query: 6   TLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLS---AP 65
           TLPL GR AIVTG SRGIGRAI++HL SLGA +VINY+SNS QA LLAS+LN  S   +P
Sbjct: 8   TLPLQGRVAIVTGGSRGIGRAISLHLASLGAKIVINYSSNSNQAQLLASQLNSTSNSSSP 67

Query: 66  LRRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEA 125
           +  A++V AD+SDPDQVK LFD AE+ F ++ HILVNSAGILDSKYPTLA T +EDWD  
Sbjct: 68  V--AISVGADISDPDQVKSLFDQAEQHFNTKSHILVNSAGILDSKYPTLANTTLEDWDNT 127

Query: 126 FRVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTAA 185
           F VN +GAFL C+EA+NRL+ GGGGRIV +TTS+VG+L PGYGAY ASKAAVEAM K  A
Sbjct: 128 FNVNAKGAFLCCREAANRLKHGGGGRIVTLTTSLVGALTPGYGAYVASKAAVEAMVKILA 187

Query: 186 KELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATD 245
           KE+KG+G+TVNCVAPGPVATE+F+AGKS++ V ++AEACPLGRLG+PDD+AKVVGFL +D
Sbjct: 188 KEMKGSGVTVNCVAPGPVATEMFFAGKSDEMVKRIAEACPLGRLGEPDDIAKVVGFLVSD 247

Query: 246 EGGWVNGQVVRVNGGSVI 261
            G WVNGQ+VRVNGG VI
Sbjct: 248 AGEWVNGQIVRVNGGFVI 263

BLAST of Cla012137 vs. TrEMBL
Match: B9SHH2_RICCO (Short-chain type dehydrogenase, putative OS=Ricinus communis GN=RCOM_1121790 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.5e-100
Identity = 181/259 (69.88%), Postives = 221/259 (85.33%), Query Frame = 1

Query: 3   AAATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELN-QLSA 62
           A+++LPL+ R AIVTGASRGIGRAI++HLHSLGA +V+NYAS+STQAD LASELN   SA
Sbjct: 10  ASSSLPLNSRVAIVTGASRGIGRAISIHLHSLGAKVVLNYASSSTQADHLASELNASASA 69

Query: 63  PLRRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDE 122
               AV ++ADVSDPDQVK+LFD  E+EFGS+IHILVN AG++D KYP+LA T VEDWD 
Sbjct: 70  SHPHAVAIKADVSDPDQVKQLFDRTEQEFGSKIHILVNCAGVMDPKYPSLANTTVEDWDM 129

Query: 123 AFRVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTA 182
            F VN +GAFL C+EA+NRL  GGGGRI++I+TS+VGS  PGY AYAASKAAVE M K  
Sbjct: 130 TFNVNAKGAFLCCREAANRLASGGGGRIIMISTSVVGSNFPGYAAYAASKAAVETMTKIL 189

Query: 183 AKELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLAT 242
           AKELKGTGIT NCVAPGPVATELF+AGK+E+T+ ++A++CPLGRLG+P D++++VGFLA+
Sbjct: 190 AKELKGTGITANCVAPGPVATELFFAGKTEETIKRIADSCPLGRLGEPKDISEIVGFLAS 249

Query: 243 DEGGWVNGQVVRVNGGSVI 261
           D G W+NGQV+RVNGG VI
Sbjct: 250 DAGEWINGQVIRVNGGFVI 268

BLAST of Cla012137 vs. TrEMBL
Match: A0A067L6N7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02734 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.7e-99
Identity = 184/262 (70.23%), Postives = 222/262 (84.73%), Query Frame = 1

Query: 1   MAAAATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLS 60
           +A++++ PLDGR AIVTGASRGIGRAI+ HLHSLGA +V+NYAS+S QADLLASELN  S
Sbjct: 12  VASSSSSPLDGRVAIVTGASRGIGRAISNHLHSLGARVVLNYASSSNQADLLASELNA-S 71

Query: 61  APLR--RAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVED 120
           AP    +A+ ++ADVS+PDQVK+LFD+AEKEF S++HILVN AG++D KYPTLA T VED
Sbjct: 72  APSSHPQAIAIRADVSNPDQVKQLFDTAEKEFNSKVHILVNCAGVMDPKYPTLANTTVED 131

Query: 121 WDEAFRVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMA 180
           WD  F VN RGAFL C+EA+NRL  GGGGRI+ I+TSIVG+  PGY AYAASKAAVE M 
Sbjct: 132 WDMTFNVNTRGAFLCCREAANRLAHGGGGRIITISTSIVGANLPGYAAYAASKAAVETMT 191

Query: 181 KTAAKELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGF 240
           K  AKELKGTGIT N VAPGPVATELF+AGK+E+TV ++A+A PLGRLG+P D+++VVGF
Sbjct: 192 KILAKELKGTGITANSVAPGPVATELFFAGKTEETVKRIADASPLGRLGEPKDISQVVGF 251

Query: 241 LATDEGGWVNGQVVRVNGGSVI 261
           LATD G W+NGQV+RVNGG +I
Sbjct: 252 LATDAGEWINGQVIRVNGGFII 272

BLAST of Cla012137 vs. TrEMBL
Match: A0A061F3H7_THECC (Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_026455 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 178/259 (68.73%), Postives = 215/259 (83.01%), Query Frame = 1

Query: 3    AAATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAP 62
            ++++L L  R AIVTG SRGIGRAIA+HLHSLGA + +NYASNSTQADLLASELN    P
Sbjct: 1131 SSSSLSLKDRVAIVTGGSRGIGRAIAIHLHSLGARVALNYASNSTQADLLASELNASYTP 1190

Query: 63   LR-RAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDE 122
               RAV ++ADVSDP+QVK LFD AE+EFGS+IHILVN AG++D KYPTLA T +EDWD 
Sbjct: 1191 EHPRAVAIKADVSDPEQVKLLFDRAEQEFGSKIHILVNCAGVMDQKYPTLANTTIEDWDT 1250

Query: 123  AFRVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTA 182
             F +N +G+FL C+EA+NRL R GGGRI++I+TS+VGSL PGY AY ASKAAVEAM K  
Sbjct: 1251 TFNINTKGSFLCCREAANRLTREGGGRIIMISTSLVGSLLPGYAAYVASKAAVEAMTKIL 1310

Query: 183  AKELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLAT 242
            AKELKGT IT NCVAPGPVATELF+AGK+E+T+ + A+ACPLGRLG+P D+A +VGFL++
Sbjct: 1311 AKELKGTRITANCVAPGPVATELFFAGKTEETIKRFADACPLGRLGEPKDIAGIVGFLSS 1370

Query: 243  DEGGWVNGQVVRVNGGSVI 261
            D G W NGQV+RVNGG V+
Sbjct: 1371 DAGEWTNGQVIRVNGGVVV 1389

BLAST of Cla012137 vs. NCBI nr
Match: gi|449459594|ref|XP_004147531.1| (PREDICTED: short-chain type dehydrogenase/reductase [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 3.8e-126
Identity = 232/257 (90.27%), Postives = 241/257 (93.77%), Query Frame = 1

Query: 4   AATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAPL 63
           A  LPLDGRTAIVTGASRGIGRAIA+HLHSLGANLV+NYASNSTQADLLASELNQ SAPL
Sbjct: 2   ATALPLDGRTAIVTGASRGIGRAIAIHLHSLGANLVLNYASNSTQADLLASELNQSSAPL 61

Query: 64  RRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEAF 123
           RRAV VQADVSDPD VKRLFDSAEKEFGSEIHILVNSAGILDSKYP+L  T VEDWDE F
Sbjct: 62  RRAVAVQADVSDPDHVKRLFDSAEKEFGSEIHILVNSAGILDSKYPSLVETTVEDWDETF 121

Query: 124 RVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTAAK 183
           RVNCRGAFLVCKEA NR++RGGGGRIVLITTSIV SLPPGYGAYAASKAAVEAMAK AAK
Sbjct: 122 RVNCRGAFLVCKEAENRIKRGGGGRIVLITTSIVLSLPPGYGAYAASKAAVEAMAKIAAK 181

Query: 184 ELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATDE 243
           ELKGTGITVNCVAPGPVATELFYAGKSE+TVA+MAEACP+GRLGQPDD+AKVVGFL TD 
Sbjct: 182 ELKGTGITVNCVAPGPVATELFYAGKSEETVARMAEACPMGRLGQPDDLAKVVGFLVTDA 241

Query: 244 GGWVNGQVVRVNGGSVI 261
           G WVNGQVVRVNGG VI
Sbjct: 242 GEWVNGQVVRVNGGLVI 258

BLAST of Cla012137 vs. NCBI nr
Match: gi|659082677|ref|XP_008441973.1| (PREDICTED: short-chain type dehydrogenase/reductase [Cucumis melo])

HSP 1 Score: 459.1 bits (1180), Expect = 5.0e-126
Identity = 232/257 (90.27%), Postives = 244/257 (94.94%), Query Frame = 1

Query: 4   AATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLSAPL 63
           AA LPL GRTAIVTGASRGIGRAIA+HLHSLGANLV+NYASNSTQADLLAS+LNQ SAPL
Sbjct: 5   AAPLPLHGRTAIVTGASRGIGRAIAIHLHSLGANLVLNYASNSTQADLLASDLNQSSAPL 64

Query: 64  RRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEAF 123
           RRAV VQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYP+LAGTAVEDWDE F
Sbjct: 65  RRAVAVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPSLAGTAVEDWDETF 124

Query: 124 RVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTAAK 183
           RVNCRGAFLVCKEA NR++RGGGGRI+LITTSIV SLPPGYGAYAASKAAVEAMAK AAK
Sbjct: 125 RVNCRGAFLVCKEAENRIKRGGGGRILLITTSIVLSLPPGYGAYAASKAAVEAMAKIAAK 184

Query: 184 ELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATDE 243
           ELKGTG+TVNCVAPGPV TELFYAGKSE+TVA++AEACP+ RLGQPDDVAKVVGFLATD 
Sbjct: 185 ELKGTGVTVNCVAPGPVETELFYAGKSEETVARIAEACPMVRLGQPDDVAKVVGFLATDA 244

Query: 244 GGWVNGQVVRVNGGSVI 261
           G WVNGQVVRVNGG VI
Sbjct: 245 GEWVNGQVVRVNGGLVI 261

BLAST of Cla012137 vs. NCBI nr
Match: gi|1021035840|gb|KZM93623.1| (hypothetical protein DCAR_016868 [Daucus carota subsp. sativus])

HSP 1 Score: 373.6 bits (958), Expect = 2.8e-100
Identity = 184/258 (71.32%), Postives = 218/258 (84.50%), Query Frame = 1

Query: 6   TLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELNQLS---AP 65
           TLPL GR AIVTG SRGIGRAI++HL SLGA +VINY+SNS QA LLAS+LN  S   +P
Sbjct: 8   TLPLQGRVAIVTGGSRGIGRAISLHLASLGAKIVINYSSNSNQAQLLASQLNSTSNSSSP 67

Query: 66  LRRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDEA 125
           +  A++V AD+SDPDQVK LFD AE+ F ++ HILVNSAGILDSKYPTLA T +EDWD  
Sbjct: 68  V--AISVGADISDPDQVKSLFDQAEQHFNTKSHILVNSAGILDSKYPTLANTTLEDWDNT 127

Query: 126 FRVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTAA 185
           F VN +GAFL C+EA+NRL+ GGGGRIV +TTS+VG+L PGYGAY ASKAAVEAM K  A
Sbjct: 128 FNVNAKGAFLCCREAANRLKHGGGGRIVTLTTSLVGALTPGYGAYVASKAAVEAMVKILA 187

Query: 186 KELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLATD 245
           KE+KG+G+TVNCVAPGPVATE+F+AGKS++ V ++AEACPLGRLG+PDD+AKVVGFL +D
Sbjct: 188 KEMKGSGVTVNCVAPGPVATEMFFAGKSDEMVKRIAEACPLGRLGEPDDIAKVVGFLVSD 247

Query: 246 EGGWVNGQVVRVNGGSVI 261
            G WVNGQ+VRVNGG VI
Sbjct: 248 AGEWVNGQIVRVNGGFVI 263

BLAST of Cla012137 vs. NCBI nr
Match: gi|255568942|ref|XP_002525441.1| (PREDICTED: short-chain type dehydrogenase/reductase [Ricinus communis])

HSP 1 Score: 373.2 bits (957), Expect = 3.6e-100
Identity = 181/259 (69.88%), Postives = 221/259 (85.33%), Query Frame = 1

Query: 3   AAATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYASNSTQADLLASELN-QLSA 62
           A+++LPL+ R AIVTGASRGIGRAI++HLHSLGA +V+NYAS+STQAD LASELN   SA
Sbjct: 10  ASSSLPLNSRVAIVTGASRGIGRAISIHLHSLGAKVVLNYASSSTQADHLASELNASASA 69

Query: 63  PLRRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWDE 122
               AV ++ADVSDPDQVK+LFD  E+EFGS+IHILVN AG++D KYP+LA T VEDWD 
Sbjct: 70  SHPHAVAIKADVSDPDQVKQLFDRTEQEFGSKIHILVNCAGVMDPKYPSLANTTVEDWDM 129

Query: 123 AFRVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKTA 182
            F VN +GAFL C+EA+NRL  GGGGRI++I+TS+VGS  PGY AYAASKAAVE M K  
Sbjct: 130 TFNVNAKGAFLCCREAANRLASGGGGRIIMISTSVVGSNFPGYAAYAASKAAVETMTKIL 189

Query: 183 AKELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLAT 242
           AKELKGTGIT NCVAPGPVATELF+AGK+E+T+ ++A++CPLGRLG+P D++++VGFLA+
Sbjct: 190 AKELKGTGITANCVAPGPVATELFFAGKTEETIKRIADSCPLGRLGEPKDISEIVGFLAS 249

Query: 243 DEGGWVNGQVVRVNGGSVI 261
           D G W+NGQV+RVNGG VI
Sbjct: 250 DAGEWINGQVIRVNGGFVI 268

BLAST of Cla012137 vs. NCBI nr
Match: gi|645263678|ref|XP_008237345.1| (PREDICTED: short-chain type dehydrogenase/reductase-like [Prunus mume])

HSP 1 Score: 371.7 bits (953), Expect = 1.0e-99
Identity = 187/260 (71.92%), Postives = 217/260 (83.46%), Query Frame = 1

Query: 2   AAAATLPLDGRTAIVTGASRGIGRAIAVHLHSLGANLVINYAS-NSTQADLLASELNQLS 61
           +++++LPL+GR AIVTG SRGIGRAIA HLHSLGA LVINY+S NSTQAD LASELN   
Sbjct: 13  SSSSSLPLNGRVAIVTGGSRGIGRAIATHLHSLGAKLVINYSSSNSTQADQLASELNSFE 72

Query: 62  APLRRAVTVQADVSDPDQVKRLFDSAEKEFGSEIHILVNSAGILDSKYPTLAGTAVEDWD 121
               +A+ V+ADVSDP+QVK LFD AE+EF ++ HI+VN AGILDSKYPTL  T+V+DWD
Sbjct: 73  NTQSKAIAVRADVSDPEQVKHLFDRAEQEFETQAHIVVNCAGILDSKYPTLPETSVDDWD 132

Query: 122 EAFRVNCRGAFLVCKEASNRLRRGGGGRIVLITTSIVGSLPPGYGAYAASKAAVEAMAKT 181
           + F VN RGAFLV +EA+ RLRRGGGGRI+ I+TS+VG L PGYGAYAASKAA E M K 
Sbjct: 133 KTFSVNARGAFLVSREAARRLRRGGGGRIIAISTSLVGGLMPGYGAYAASKAAAETMTKI 192

Query: 182 AAKELKGTGITVNCVAPGPVATELFYAGKSEDTVAKMAEACPLGRLGQPDDVAKVVGFLA 241
            AKELKG+GIT NCVAPGPVATELF+AGKSE+TV K+AEACPL RLG+P DVA+VVGFLA
Sbjct: 193 LAKELKGSGITANCVAPGPVATELFFAGKSEETVKKIAEACPLNRLGEPKDVAQVVGFLA 252

Query: 242 TDEGGWVNGQVVRVNGGSVI 261
            D   WVNGQV+RVNGG VI
Sbjct: 253 GDAAEWVNGQVIRVNGGYVI 272

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SDR1_PICAB3.1e-7557.81Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1[more]
FABG_BACSU6.4e-4137.303-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168... [more]
STCU_EMENI1.1e-4037.87Versicolorin reductase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS... [more]
FABG_STAES7.9e-3938.463-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s... [more]
FABG_STAEQ7.9e-3938.463-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s... [more]
Match NameE-valueIdentityDescription
A0A0A0L1D5_CUCSA2.7e-12690.27Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192180 PE=4 SV=1[more]
A0A164XV52_DAUCA1.9e-10071.32Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_016868 PE=4 SV=1[more]
B9SHH2_RICCO2.5e-10069.88Short-chain type dehydrogenase, putative OS=Ricinus communis GN=RCOM_1121790 PE=... [more]
A0A067L6N7_JATCU4.7e-9970.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02734 PE=4 SV=1[more]
A0A061F3H7_THECC1.4e-9868.73Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM... [more]
Match NameE-valueIdentityDescription
gi|449459594|ref|XP_004147531.1|3.8e-12690.27PREDICTED: short-chain type dehydrogenase/reductase [Cucumis sativus][more]
gi|659082677|ref|XP_008441973.1|5.0e-12690.27PREDICTED: short-chain type dehydrogenase/reductase [Cucumis melo][more]
gi|1021035840|gb|KZM93623.1|2.8e-10071.32hypothetical protein DCAR_016868 [Daucus carota subsp. sativus][more]
gi|255568942|ref|XP_002525441.1|3.6e-10069.88PREDICTED: short-chain type dehydrogenase/reductase [Ricinus communis][more]
gi|645263678|ref|XP_008237345.1|1.0e-9971.92PREDICTED: short-chain type dehydrogenase/reductase-like [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0008150 biological_process
biological_process GO:0009451 RNA modification
cellular_component GO:0005835 fatty acid synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0102132 3-oxo-pimeloyl-[acp] methyl ester reductase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU31879watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU60205watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012137Cla012137.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU31879WMU31879transcribed_cluster
WMU60205WMU60205transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 147..155
score: 9.9E-8coord: 92..103
score: 9.9E-8coord: 167..186
score: 9.
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 13..30
score: 8.4E-38coord: 141..157
score: 8.4E-38coord: 188..205
score: 8.4E-38coord: 92..103
score: 8.4E-38coord: 222..242
score: 8.4E-38coord: 167..186
score: 8.4
IPR002347Short-chain dehydrogenase/reductase SDRPANTHERPTHR24322FAMILY NOT NAMEDcoord: 167..199
score: 4.7E-84coord: 16..151
score: 4.7
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 6..258
score: 8.2
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 10..258
score: 2.17
NoneNo IPR availablePANTHERPTHR24322:SF429NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEINcoord: 167..199
score: 4.7E-84coord: 16..151
score: 4.7
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 18..257
score: 4.6
NoneNo IPR availableSMARTSM00822PKS_KRcoord: 12..198
score: 9.