Cla012124 (gene) Watermelon (97103) v1

Overview
NameCla012124
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionHeat shock protein (AHRD V1 ***- A9QVH3_9FABA); contains Interpro domain(s) IPR008978 HSP20-like chaperone
LocationChr4 : 15868725 .. 15869738 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCGATCGCTCTCCGAAGGCTTGCCGCTTCCTCTGCCGCTAAGCTTTTCAGTCCTGTTCGCTCCGCCTCTGTTCTCCCCTCTGTCGGTCGTTCATTCAACACCAATGCTCAGATGACCAACTACGCCGATGACGACCGCTCCGTCGATGTTGACCGCCGCGCCGACCGATCTATCTCTCGTTCTCGTGATCGCTTCCCTGGCTTCGCAGGTAGTTGTTATCTTCATCCGTGTTTGAGTTTCGGACATTGATTTCTTCATCGATTGTAATGTGTCTGGATTGTTCTGGAGTTTTCATCTAGGTTTTCGTGAGTGATTTGTTGTTTGTTTGAGTGATTTCGTTTCGGTTTGTGGAAATGGCTGCGTGGTTCTTCGGGTGGAATTGAATGTTTTGAGTTGAGATGTCCGAGTAATTTCTCATTTGTCGGCTTGTTCTCTCGTTCACGATGGATCTTTGCTCTGATCTCAGTCTGTTGGTTGAACAATTGCCATGTAGTGATTAATTCATTGAGGATTAGGGAGAAATCTCGCTTGTTGTTTGTGAATGGAGGATTCTTGTTCTAAACACTCTTTGGCTGTCGATTTGCAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCTTAAGCCAGGTGCTGAATCTGATGGATCAGTTAATGGAGGATCCATTTCTGGCAGCTTCACGAGGAGTAGGAGCAGGATCGAGGAGGGGCTGGGACGTGAGAGAAGACGACAATGCTCTGTATCTACGAATGGACATGCCTGGACTGAGCAAAGAGGATGTGAAGGTGAGTGTGGAGCAGAACACACTGATCATAAAAGGTGAAGCAGCGAAAGAGTCCGAAGACGAGGAGGACCGGAGACGATTCTCGAGCCGACTGGATTTGCCTGGGAACCTGTACGAGCTGAATTCGATCAAAGCAGAGATGAAAAATGGGGTTCTGAAAGTGGCGGTGCCAAAGGTGAAGGAAGAAGAGAGGAAGGATGTGAGGCATGTTACTGTTGAGTAG

mRNA sequence

ATGGCTTCTTCGATCGCTCTCCGAAGGCTTGCCGCTTCCTCTGCCGCTAAGCTTTTCAGTCCTGTTCGCTCCGCCTCTGTTCTCCCCTCTGTCGGTCGTTCATTCAACACCAATGCTCAGATGACCAACTACGCCGATGACGACCGCTCCGTCGATGTTGACCGCCGCGCCGACCGATCTATCTCTCGTTCTCGTGATCGCTTCCCTGGCTTCGCAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCTTAAGCCAGGTGCTGAATCTGATGGATCAGTTAATGGAGGATCCATTTCTGGCAGCTTCACGAGGAGTAGGAGCAGGATCGAGGAGGGGCTGGGACGTGAGAGAAGACGACAATGCTCTGTATCTACGAATGGACATGCCTGGACTGAGCAAAGAGGATGTGAAGGTGAGTGTGGAGCAGAACACACTGATCATAAAAGGTGAAGCAGCGAAAGAGTCCGAAGACGAGGAGGACCGGAGACGATTCTCGAGCCGACTGGATTTGCCTGGGAACCTGTACGAGCTGAATTCGATCAAAGCAGAGATGAAAAATGGGGTTCTGAAAGTGGCGGTGCCAAAGGTGAAGGAAGAAGAGAGGAAGGATGTGAGGCATGTTACTGTTGAGTAG

Coding sequence (CDS)

ATGGCTTCTTCGATCGCTCTCCGAAGGCTTGCCGCTTCCTCTGCCGCTAAGCTTTTCAGTCCTGTTCGCTCCGCCTCTGTTCTCCCCTCTGTCGGTCGTTCATTCAACACCAATGCTCAGATGACCAACTACGCCGATGACGACCGCTCCGTCGATGTTGACCGCCGCGCCGACCGATCTATCTCTCGTTCTCGTGATCGCTTCCCTGGCTTCGCAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCTTAAGCCAGGTGCTGAATCTGATGGATCAGTTAATGGAGGATCCATTTCTGGCAGCTTCACGAGGAGTAGGAGCAGGATCGAGGAGGGGCTGGGACGTGAGAGAAGACGACAATGCTCTGTATCTACGAATGGACATGCCTGGACTGAGCAAAGAGGATGTGAAGGTGAGTGTGGAGCAGAACACACTGATCATAAAAGGTGAAGCAGCGAAAGAGTCCGAAGACGAGGAGGACCGGAGACGATTCTCGAGCCGACTGGATTTGCCTGGGAACCTGTACGAGCTGAATTCGATCAAAGCAGAGATGAAAAATGGGGTTCTGAAAGTGGCGGTGCCAAAGGTGAAGGAAGAAGAGAGGAAGGATGTGAGGCATGTTACTGTTGAGTAG

Protein sequence

MASSIALRRLAASSAAKLFSPVRSASVLPSVGRSFNTNAQMTNYADDDRSVDVDRRADRSISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVREDDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE
Homology
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BLAST of Cla012124 vs. Swiss-Prot
Match: HS23C_OXYRB (Small heat shock protein, chloroplastic OS=Oxybasis rubra GN=HSP23 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.3e-60
Identity = 127/213 (59.62%), Postives = 157/213 (73.71%), Query Frame = 1 

Query: 3   SSIALRRLAASSAAK--LFSPVRSASVLPSVGRSFNTNAQMTNYADDDRSVDVDRRADRS 62
           +S+ALRRLA+ +     +F P+       SV RSFNTNAQM      D   ++D R++R+
Sbjct: 2   ASMALRRLASRNLVSGGIFRPL-------SVSRSFNTNAQMGRV---DHDHELDDRSNRA 61

Query: 63  ISRSRDRFPG--FADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRE 122
               R  FP   F+DVFDPF  TRS+ Q++NLMDQLME+PF+AASRG G   RRGWDVRE
Sbjct: 62  PISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVRE 121

Query: 123 DDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYEL 182
           D+ AL L++DMPGL+KEDVKVSVE NTLIIK EA KE+E+EE RRR+SSR++L  NLY++
Sbjct: 122 DEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKI 181

Query: 183 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           + IKAEMKNGVLKV VPK+KEEE+KDV  V V+
Sbjct: 182 DGIKAEMKNGVLKVTVPKIKEEEKKDVFQVMVD 204

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BLAST of Cla012124 vs. Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-56
Identity = 124/217 (57.14%), Postives = 160/217 (73.73%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVL-PSVG-RSFNTNAQMTNYADDDRSVDVDRRAD 60
           MAS++AL+RL +SS A      RS SVL P+V  R FNTNA + +Y DD  + D      
Sbjct: 1   MASALALKRLLSSSIAP-----RSRSVLRPAVSSRLFNTNA-VRSYDDDGENGDGVDLYR 60

Query: 61  RSISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGA-GSRRGWDVR 120
           RS+ R R  F  F+DVFDPFSPTRS+SQVLNLMDQ ME+P L+A+RG+GA G+RRGWD++
Sbjct: 61  RSVPRRRGDF--FSDVFDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIK 120

Query: 121 EDDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKE----SEDEEDRRRFSSRLDLPG 180
           E D+ALYLR+DMPGLS+EDVK+++EQ+TL+I+GE   E     E E   RRF+SR+ LP 
Sbjct: 121 EKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPD 180

Query: 181 NLYELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTV 211
            +Y+++ IKAEMKNGVLKV +PK+KE+ER DVR + +
Sbjct: 181 KIYKIDEIKAEMKNGVLKVVIPKMKEQERNDVRQIEI 209

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BLAST of Cla012124 vs. Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.6e-52
Identity = 110/213 (51.64%), Postives = 155/213 (72.77%), Query Frame = 1 

Query: 2   ASSIALRRLAASSAAKLFSPVRSASVLPSVGRSFNTNAQMTNYADDDRSVDVDRRADRSI 61
           +S++ALRRL +SS   +   +R+   + +  R FNTNA   NY D    VD +  ++R +
Sbjct: 4   SSALALRRLLSSSTVAVPRALRAVRPVAASSRLFNTNAAR-NYED---GVDRNHHSNRHV 63

Query: 62  SRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGA-GSRRGWDVREDD 121
           SR    F  F+ + DPF+PTRSLSQ+LN MDQ+ E P ++A+RG+GA G RRGW+V+E D
Sbjct: 64  SRHGGDF--FSHILDPFTPTRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKD 123

Query: 122 NALYLRMDMPGLSKEDVKVSVEQNTLIIKGEA-AKESEDEE-DRRRFSSRLDLPGNLYEL 181
           +AL+LR+DMPGLS+EDVK+++EQNTL+I+GE   +E ED   D RRF+SR++LP  +Y+ 
Sbjct: 124 DALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKT 183

Query: 182 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           + IKAEMKNGVLKV +PK+KE+ER ++RH+ V+
Sbjct: 184 DEIKAEMKNGVLKVVIPKIKEDERNNIRHINVD 210

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BLAST of Cla012124 vs. Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.9e-51
Identity = 123/216 (56.94%), Postives = 152/216 (70.37%), Query Frame = 1 

Query: 1   MASSIALRRLAASS--AAKLFSPVRSASVLPSVGRSFNTNA-QMTNYADDDRSVDVDRRA 60
           MASS+AL+R  +S   ++    PV S     S  RSFNTNA +  +   DDR+VDV R  
Sbjct: 1   MASSLALKRFLSSGLLSSSFLRPVAS-----SASRSFNTNAMRQYDQHSDDRNVDVYRH- 60

Query: 61  DRSISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVR 120
             S  R+R      +DVFDPFSP RSLSQVLN++D L ++P L+A+      SRRGWD R
Sbjct: 61  --SFPRTRRDDLLLSDVFDPFSPPRSLSQVLNMVDLLTDNPVLSAA------SRRGWDAR 120

Query: 121 EDDNALYLRMDMPGLSKEDVKVSVEQNTLIIKG-EAAKESED-EEDRRRFSSRLDLPGNL 180
           E ++AL+LR+DMPGL KEDVK+SVEQNTL IKG E AKESE+ E+  RRFSSR+DLP  L
Sbjct: 121 ETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKL 180

Query: 181 YELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           Y+++ IKAEMKNGVLKV VPK+KEEER +V +V V+
Sbjct: 181 YKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKVD 202

[Close]
BLAST of Cla012124 vs. Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-41
Identity = 111/232 (47.84%), Postives = 137/232 (59.05%), Query Frame = 1 

Query: 1   MASSIALRRLAASS--AAKLFSPVRSASVLPSVGRSFNTNA--QMTNYADDDRSVDVDRR 60
           MASS+  +R  +SS  +  L  P  SAS      RSF+TNA  Q  N ADD  S D+DR 
Sbjct: 1   MASSLIAKRFLSSSLLSRSLLRPAASAS-----HRSFDTNAMRQYDNRADD-HSTDIDRH 60

Query: 61  ADRSISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAG------- 120
           ++RS       FP  A   D F   R +  + +      +  F   S   G G       
Sbjct: 61  SERS-------FPSTARRDDIF--LRCVGSIFS------DSEFEPGSEHDGPGHGQSVPL 120

Query: 121 ----------SRRGWDVREDDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDE 180
                     S RGWD RE ++AL+LR+DMPGL+KEDVK+SVEQNTLIIKGE AKE ++E
Sbjct: 121 RVARDRSWRWSGRGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEE 180

Query: 181 EDRRRFSSRLDLPGNLYELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           E  RR++SR+DLP  LY+++ I+AEMKNGVLKV VPK+KEEERKDV  V VE
Sbjct: 181 ESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDVISVKVE 211

[Close]
BLAST of Cla012124 vs. TrEMBL
Match: A0A0A0L1K2_CUCSA (Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020090 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.1e-93
Identity = 184/213 (86.38%), Postives = 193/213 (90.61%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVLPS-VGRSFNTNAQMTNYADDDRSVDVDRRADR 60
           MASSIALR L A SA KL +PVRSAS+LPS V RSFNTNAQMTNY  DDRSV+VDRR+DR
Sbjct: 1   MASSIALRALTAFSAPKLINPVRSASILPSSVPRSFNTNAQMTNYDHDDRSVEVDRRSDR 60

Query: 61  SISRSRDRFPGFA-DVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRE 120
           S+SRSRD + GF  +VFDPFS TRSLSQVLNLMDQ MEDPFLAASRGVGAGSRRGWDV+E
Sbjct: 61  SLSRSRDPYSGFGGNVFDPFSQTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE 120

Query: 121 DDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYEL 180
           DDN LYLRMDMPGL K+DVKVSVEQNTLIIKGEA KESEDEED RRFSSRLDLP NLYEL
Sbjct: 121 DDNCLYLRMDMPGLGKDDVKVSVEQNTLIIKGEAEKESEDEEDLRRFSSRLDLPANLYEL 180

Query: 181 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE
Sbjct: 181 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 213

[Close]
BLAST of Cla012124 vs. TrEMBL
Match: H6TB40_CITLA (HSP23.5 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 7.0e-93
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVLPSVGRSFNTNAQMTNYADDDRSVDVDRRADRS 60
           MASSIALRRLAASSAAKLFSPVRSASVLPSVGRSFNTNAQMTNYADDDRSVDVDR +DRS
Sbjct: 1   MASSIALRRLAASSAAKLFSPVRSASVLPSVGRSFNTNAQMTNYADDDRSVDVDRGSDRS 60

Query: 61  ISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVREDD 120
           ISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVREDD
Sbjct: 61  ISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVREDD 120

Query: 121 NALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYELNS 180
           NALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLP NLYELNS
Sbjct: 121 NALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPANLYELNS 180

Query: 181 IKA 184
           IK+
Sbjct: 181 IKS 183

[Close]
BLAST of Cla012124 vs. TrEMBL
Match: A0A0A0L494_CUCSA (Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020080 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 7.5e-87
Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVLPS-VGRSFNTNAQMTNYADDDRSVDVDRRADR 60
           MASSIALRRLAASSA KLF+PVRSASVLPS V RSFNTNAQMTNY DDDRSVDVD R+DR
Sbjct: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60

Query: 61  SISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRED 120
           S+SRSRDR+PGF DVFDPFSPTRSLSQVLNLMDQ MEDPFLAASRGVGAGSRRGWDV+ED
Sbjct: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120

Query: 121 DNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYELN 180
           DNALYLRMDMPGLSK+DV+VSVEQNTLIIKGE AKESEDEEDRRRFSSRLDLP NLYELN
Sbjct: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 180

Query: 181 SIKAE 185
           SIKAE
Sbjct: 181 SIKAE 185

[Close]
BLAST of Cla012124 vs. TrEMBL
Match: A0A059CHN9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-76
Identity = 159/220 (72.27%), Postives = 184/220 (83.64%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAA-----KLFSPVRSASVLPSVGRSFNTNAQMTNYADDDRSVDVDR 60
           MASS+ALRR AA++A+     +L +PVR+ASV P   RSFNT++QM  Y +DD  VDV+R
Sbjct: 1   MASSLALRRAAAAAASSGVLSRLTNPVRAASVAPHAPRSFNTSSQMRRYDEDDSDVDVER 60

Query: 61  RADRSISRSRDRFPG-FADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGA-GSRRG 120
           R+DR++SR R+  PG F+DVFDPFSPTRSLSQVLNLMDQ ME PFLAASRG+GA GSRRG
Sbjct: 61  RSDRAVSRRRE--PGLFSDVFDPFSPTRSLSQVLNLMDQFMESPFLAASRGMGAAGSRRG 120

Query: 121 WDVREDDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDR--RRFSSRLDL 180
           WDV+EDD+ALYLRMDMPGLS+EDVKVSVEQNTL IKGE  KESE+EE+   RR+SSRLDL
Sbjct: 121 WDVKEDDSALYLRMDMPGLSREDVKVSVEQNTLTIKGEGEKESEEEEEESGRRYSSRLDL 180

Query: 181 PGNLYELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           P NLY+L  IKAEMKNGVLKV VPKVKEEERKDV  V +E
Sbjct: 181 PPNLYKLGEIKAEMKNGVLKVVVPKVKEEERKDVFQVKIE 218

[Close]
BLAST of Cla012124 vs. TrEMBL
Match: A0A059CH37_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.0e-75
Identity = 156/219 (71.23%), Postives = 180/219 (82.19%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAA-----KLFSPVRSASVLPSVGRSFNTNAQMTNYADDDRSVDVDR 60
           MASS+ALRR AA++A+     +L +PVR+ASV P   RSFNT++QM  Y +DD  VDV+R
Sbjct: 1   MASSLALRRAAAAAASSGVLSRLTNPVRAASVAPHAPRSFNTSSQMRRYDEDDSDVDVER 60

Query: 61  RADRSISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGA-GSRRGW 120
           R+DR++SR R+      DVFDPFSPTRSLSQVLNLMDQ ME PFLAASRG+GA GSRRGW
Sbjct: 61  RSDRAVSRRRE-----PDVFDPFSPTRSLSQVLNLMDQFMESPFLAASRGMGAAGSRRGW 120

Query: 121 DVREDDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDR--RRFSSRLDLP 180
           DV+EDD+ALYLRMDMPGLS+EDVKVSVEQNTL IKGE  KESE+EE+   RR+SSRLDLP
Sbjct: 121 DVKEDDSALYLRMDMPGLSREDVKVSVEQNTLTIKGEGEKESEEEEEESGRRYSSRLDLP 180

Query: 181 GNLYELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
            NLY+L  IKAEMKNGVLKV VPKVKEEERKDV  V +E
Sbjct: 181 PNLYKLGEIKAEMKNGVLKVVVPKVKEEERKDVFQVKIE 214

[Close]
BLAST of Cla012124 vs. NCBI nr
Match: gi|659095963|ref|XP_008448853.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 6.3e-103
Identity = 196/212 (92.45%), Postives = 204/212 (96.23%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVLPS-VGRSFNTNAQMTNYADDDRSVDVDRRADR 60
           MASSIALRRLAASSA KLF+PVRSASVLPS + RSFNTNAQMTNY DDDRSVDVDRR+DR
Sbjct: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61  SISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRED 120
           S+SRSRDRFPGF DVFDPFSPTRSLSQVLNLMDQ MEDPFLAASRGVGAG+RRGWDV+ED
Sbjct: 61  SLSRSRDRFPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGTRRGWDVKED 120

Query: 121 DNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYELN 180
           DNALYLRMDMPGLSK+DV+VSVEQNTLIIKGE AKESEDEEDRRRFSSRLDLP NLYELN
Sbjct: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEEAKESEDEEDRRRFSSRLDLPANLYELN 180

Query: 181 SIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           SIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE
Sbjct: 181 SIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212

[Close]
BLAST of Cla012124 vs. NCBI nr
Match: gi|659095978|ref|XP_008448861.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 9.1e-102
Identity = 195/212 (91.98%), Postives = 203/212 (95.75%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVLPS-VGRSFNTNAQMTNYADDDRSVDVDRRADR 60
           MASSIALRRLAASSA+KL  PVRSASVLPS VGRSFNT+A MTNY D DRS+DVDRR+DR
Sbjct: 1   MASSIALRRLAASSASKLIRPVRSASVLPSSVGRSFNTDAHMTNYDDHDRSLDVDRRSDR 60

Query: 61  SISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRED 120
           S+SRSRDR+PGF DVFDPFSPTRSLSQVLNLMDQ MEDPFLAASRGVGAGSRRGWDV+ED
Sbjct: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120

Query: 121 DNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYELN 180
           DNALYLRMDMPGLSK+DVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLP NLYELN
Sbjct: 121 DNALYLRMDMPGLSKDDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPANLYELN 180

Query: 181 SIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           SIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE
Sbjct: 181 SIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212

[Close]
BLAST of Cla012124 vs. NCBI nr
Match: gi|659095961|ref|XP_008448852.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 375.6 bits (963), Expect = 5.9e-101
Identity = 195/213 (91.55%), Postives = 204/213 (95.77%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVLPS-VGRSFNTNAQMTNYADDDRSVDVDRRADR 60
           MASSIALRRLAASSA KLF+PVRSASVLPS + RSFNTNAQMTNY DDDRSVDVDRR+DR
Sbjct: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61  SISRSRDRFPGFA-DVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRE 120
           S+SRSRDRFPGF  +VFDPFSPTRSLSQVLNLMDQ MEDPFLAASRGVGAG+RRGWDV+E
Sbjct: 61  SLSRSRDRFPGFGGNVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGTRRGWDVKE 120

Query: 121 DDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYEL 180
           DDNALYLRMDMPGLSK+DV+VSVEQNTLIIKGE AKESEDEEDRRRFSSRLDLP NLYEL
Sbjct: 121 DDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEEAKESEDEEDRRRFSSRLDLPANLYEL 180

Query: 181 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE
Sbjct: 181 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 213

[Close]
BLAST of Cla012124 vs. NCBI nr
Match: gi|659095976|ref|XP_008448860.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 371.7 bits (953), Expect = 8.5e-100
Identity = 194/213 (91.08%), Postives = 203/213 (95.31%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVLPS-VGRSFNTNAQMTNYADDDRSVDVDRRADR 60
           MASSIALRRLAASSA+KL  PVRSASVLPS VGRSFNT+A MTNY D DRS+DVDRR+DR
Sbjct: 1   MASSIALRRLAASSASKLIRPVRSASVLPSSVGRSFNTDAHMTNYDDHDRSLDVDRRSDR 60

Query: 61  SISRSRDRFPGFA-DVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRE 120
           S+SRSRDR+PGF  +VFDPFSPTRSLSQVLNLMDQ MEDPFLAASRGVGAGSRRGWDV+E
Sbjct: 61  SLSRSRDRYPGFGGNVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE 120

Query: 121 DDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYEL 180
           DDNALYLRMDMPGLSK+DVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLP NLYEL
Sbjct: 121 DDNALYLRMDMPGLSKDDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPANLYEL 180

Query: 181 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE
Sbjct: 181 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 213

[Close]
BLAST of Cla012124 vs. NCBI nr
Match: gi|700200737|gb|KGN55870.1| (Mitochondrial small heat shock protein [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 5.9e-93
Identity = 184/213 (86.38%), Postives = 193/213 (90.61%), Query Frame = 1 

Query: 1   MASSIALRRLAASSAAKLFSPVRSASVLPS-VGRSFNTNAQMTNYADDDRSVDVDRRADR 60
           MASSIALR L A SA KL +PVRSAS+LPS V RSFNTNAQMTNY  DDRSV+VDRR+DR
Sbjct: 1   MASSIALRALTAFSAPKLINPVRSASILPSSVPRSFNTNAQMTNYDHDDRSVEVDRRSDR 60

Query: 61  SISRSRDRFPGFA-DVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRE 120
           S+SRSRD + GF  +VFDPFS TRSLSQVLNLMDQ MEDPFLAASRGVGAGSRRGWDV+E
Sbjct: 61  SLSRSRDPYSGFGGNVFDPFSQTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE 120

Query: 121 DDNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPGNLYEL 180
           DDN LYLRMDMPGL K+DVKVSVEQNTLIIKGEA KESEDEED RRFSSRLDLP NLYEL
Sbjct: 121 DDNCLYLRMDMPGLGKDDVKVSVEQNTLIIKGEAEKESEDEEDLRRFSSRLDLPANLYEL 180

Query: 181 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212
           NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE
Sbjct: 181 NSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 213

The following BLAST results are available for this feature:
BLAST of Cla012124 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HS23C_OXYRB2.3e-6059.62Small heat shock protein, chloroplastic OS=Oxybasis rubra GN=HSP23 PE=2 SV=1[more]
HS23M_ARATH1.5e-5657.1423.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE... [more]
HS235_ARATH6.6e-5251.6423.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE... [more]
HS22M_PEA1.9e-5156.94Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1[more]
HS22M_SOYBN6.8e-4147.84Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1[more]
BLAST of Cla012124 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1K2_CUCSA4.1e-9386.38Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020090 PE=3 S... [more]
H6TB40_CITLA7.0e-9397.81HSP23.5 OS=Citrullus lanatus PE=2 SV=1[more]
A0A0A0L494_CUCSA7.5e-8791.35Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020080 PE=3 S... [more]
A0A059CHN9_EUCGR1.2e-7672.27Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1[more]
A0A059CH37_EUCGR3.0e-7571.23Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1[more]
BLAST of Cla012124 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659095963|ref|XP_008448853.1|6.3e-10392.45PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo... [more]
gi|659095978|ref|XP_008448861.1|9.1e-10291.98PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo... [more]
gi|659095961|ref|XP_008448852.1|5.9e-10191.55PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo... [more]
gi|659095976|ref|XP_008448860.1|8.5e-10091.08PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo... [more]
gi|700200737|gb|KGN55870.1|5.9e-9386.38Mitochondrial small heat shock protein [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU12498watermelon unigene v2 vs TrEMBLtranscribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012124Cla012124.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU12498WMU12498transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 115..210
score: 8.4
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 115..196
score: 20
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 75..210
score: 8.0
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 81..204
score: 2.01
NoneNo IPR availablePANTHERPTHR11527:SF136SUBFAMILY NOT NAMEDcoord: 1..211
score: 5.5