Cla011996 (gene) Watermelon (97103) v1

Overview
NameCla011996
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPhosphoribosylaminoimidazole carboxylase catalytic subunit (AHRD V1 ***- B9KBK6_THENN); contains Interpro domain(s) IPR000031 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
LocationChr11 : 5164046 .. 5165768 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCCGCAAAGGTCCTTGACACATTTGGTGTGCCTTATGAGGTTAGTTTCAATTTTTTATGATTGATGTTGTTTATGTCCATGATACATATATTTTTTGTTAAAATACTATTTTGGTTCTTGTATACAAACTAATATGAAATTAAATTAATAATAGGACCAAAATGATACTTTTAACATTTTCCTATGAACATGTTATGTGTGTGTATATATAATGTTTAACCTGTGAGTTTTTTTCTTCTAATAATTTGCAGATAAAGATAGTTTCTGCACATCGGACCCCCGATTGGATGTTTTCTTACGCATTATCTGCTCAGGAGAGAGGGATACAGATTATCATTGCTGGTGCTGGGGGTGCAGCCCATTTACCAGGCTAGTTATTTAAATGCTTCATGGATAGTATATAGTATTTGGATAGAACAAAAGATCTCATTCTAAAGGGCTGATCAACGTCCAGTGGACAAAAAATGCTCTGATTTACTTGGGTCACTGGCTATTGCATGTTATAAATTCAGGGGATATTTCTTCATGTGAAATCTGATAAACAAAGAAAGTTTGGGGCTCTATTTATTTTCTCAAAAAATAGGATATTTCTCATTAGTGAGCCGCTTGAGTTTCAGGTATGGTTGCCTCTCTTACACCGTTGCCTGTTATTGGTGTCCCCGTGCGTGCTTCAACATTGGATGGACTTGATTCTCTCCTGTCAATTGTGCAGGTACTCAAAATTTTCTGTTTCCATTGGTTTGATCCAAACAAATTTATGAATATAAACATAAATTTTAGTGCATTTTTCAAGATCACTTAATGTGATTTGTGATTTAACATTTCTTCATTTGTCCTGTTTCTAAAAGTTGGTCCCTAACCTCTTTCTTGAATGAGACTCAAGTTCTAACTTTTAAATGAATGTTCCAGTATAAGTAAGAGATTATATCGGCTTTGTAGGATTAATCTTTGTAAATTTCGGCAGTAGATGGCAGGTCTATTTAACTTGCGTTCGATGGATAGAAAATGGGATTATACTCTGATAGAAGTATCTTCCTAATGACTATTAAGTATTCAAGTGTGTTATTTGACAATTTACAGCATGACCATCGGATTTTAGTTGGGTTCTAACATATGCTCTATGTAATAACACCATTACTTGCTTTTGGCAATTGTTTGTCCAAATTCTTGGTTCCCATTTTGCAAGTGTCTTCCCAGGCAGCATTTATGACTATTGCAAGACAACATCATGGGTCGGCCTTTTGGTAGATAGAGAGCATGACTTTGATAAAGGGCTAATAGGTCATAGGTTCAATCCATGGCAGCTATCTACTTAGGATTTAATATCTTACGAGTTTCTCTAACACTCAAATGTTGAGAGTCAGGCGAGTTATTAAGAAAAAGAATTGATTGTTGTAAGGACTGCTCGTGCAGATGCCAAGGGGAGTTCCGGTTGCAACTGTTGCAATCAATAACGCAACCAATGCTGGTTTGTTGGCAGTAAGGATGTTGGGGGTGGCAGATCCGGATCTACTCTCAAGGTGCTGCTCTTATTTTGCTTACAAATAATATAGTGAATCCCTTACCCAAAATCCATCAATTTGACATGGCACCATTACGCAGGATGAGCCAGTTTCAAGAAGACACCAAGAAAAATGTATTGAACAAGGCAGAAAAGTTAGAAAAAGATGGTTGGGACCTGCAGTGA

mRNA sequence

ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCCGCAAAGGTCCTTGACACATTTGGTGTGCCTTATGAGATAAAGATAGTTTCTGCACATCGGACCCCCGATTGGATGTTTTCTTACGCATTATCTGCTCAGGAGAGAGGGATACAGATTATCATTGCTGGTGCTGGGGGTATGGTTGCCTCTCTTACACCGTTGCCTGTTATTGGTGTCCCCGTGCGTGCTTCAACATTGGATGGACTTGATTCTCTCCTGTCAATTGTGCAGATGCCAAGGGGAGTTCCGGTTGCAACTGTTGCAATCAATAACGCAACCAATGCTGGTTTGTTGGCAGTAAGGATGTTGGGGGTGGCAGATCCGGATCTACTCTCAAGGATGAGCCAGTTTCAAGAAGACACCAAGAAAAATGTATTGAACAAGGCAGAAAAGTTAGAAAAAGATGGTTGGGACCTGCAGTGA

Coding sequence (CDS)

ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCCGCAAAGGTCCTTGACACATTTGGTGTGCCTTATGAGATAAAGATAGTTTCTGCACATCGGACCCCCGATTGGATGTTTTCTTACGCATTATCTGCTCAGGAGAGAGGGATACAGATTATCATTGCTGGTGCTGGGGGTATGGTTGCCTCTCTTACACCGTTGCCTGTTATTGGTGTCCCCGTGCGTGCTTCAACATTGGATGGACTTGATTCTCTCCTGTCAATTGTGCAGATGCCAAGGGGAGTTCCGGTTGCAACTGTTGCAATCAATAACGCAACCAATGCTGGTTTGTTGGCAGTAAGGATGTTGGGGGTGGCAGATCCGGATCTACTCTCAAGGATGAGCCAGTTTCAAGAAGACACCAAGAAAAATGTATTGAACAAGGCAGAAAAGTTAGAAAAAGATGGTTGGGACCTGCAGTGA

Protein sequence

MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGGMVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWDLQ
Homology
[Close]
BLAST of Cla011996 vs. Swiss-Prot
Match: PUR6_VIGAC (Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment) OS=Vigna aconitifolia GN=PURKE PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.6e-60
Identity = 118/157 (75.16%), Postives = 135/157 (85.99%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSD PVM+ AA++++ FGVP+E++IVSAHRTP+ MF YA SA ERG Q+IIAGAGG 
Sbjct: 395 MGSDSDLPVMKSAAEMMEMFGVPHEVRIVSAHRTPELMFCYASSAHERGYQVIIAGAGGA 454

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVASLTPLPV+GVPVRASTLDGLDSLLSIVQMPRGVPVATVA+NNATNAGLLAVR
Sbjct: 455 AHLPGMVASLTPLPVVGVPVRASTLDGLDSLLSIVQMPRGVPVATVAVNNATNAGLLAVR 514

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
           MLGVA+ +LLSRMSQ+QED K+ VL + +KLEK GW+
Sbjct: 515 MLGVANDNLLSRMSQYQEDQKEAVLREGDKLEKHGWE 551

[Close]
BLAST of Cla011996 vs. Swiss-Prot
Match: PUR6_SCHPO (Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ade6 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.5e-49
Identity = 101/156 (64.74%), Postives = 119/156 (76.28%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSD   M+DAA +LD F VPYE+ IVSAHRTPD M +YA +A  RG+++IIAGAGG 
Sbjct: 392 MGSDSDLSKMKDAAVILDEFKVPYELTIVSAHRTPDRMVTYARTAASRGLRVIIAGAGGA 451

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVA++TPLPVIGVPV+ STLDG+DSL SIVQMPRGVPVATVAINN+ NAG+LA R
Sbjct: 452 AHLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNSQNAGILACR 511

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGW 151
           +L    P LL+ M  F ++ K+ VL KA+KLEK GW
Sbjct: 512 ILATFQPSLLAAMESFMDNMKEIVLEKADKLEKVGW 547

[Close]
BLAST of Cla011996 vs. Swiss-Prot
Match: PURE_THEMA (N5-carboxyaminoimidazole ribonucleotide mutase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=purE PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-48
Identity = 98/156 (62.82%), Postives = 124/156 (79.49%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSD PVM+ AA++L+ FG+ YEI IVSAHRTPD MF YA +A+ERGI++IIAGAGG 
Sbjct: 8   MGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGA 67

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVAS+T LPVIGVPV+ STL+GLDSL SIVQMP GVPVATVAINNA NAG+LA  
Sbjct: 68  AHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAAS 127

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGW 151
           +LG+  P++  ++ +++E  K+ VL KA++LE+ G+
Sbjct: 128 ILGIKYPEIARKVKEYKERMKREVLEKAQRLEQIGY 163

[Close]
BLAST of Cla011996 vs. Swiss-Prot
Match: PURE_PYRHO (N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=purE PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 9.3e-48
Identity = 92/157 (58.60%), Postives = 124/157 (78.98%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSD PVM++AA++L+ FGVPYEI I+SAHRTP+  + YA  A+ERGI++IIAGAGG 
Sbjct: 16  MGSDSDLPVMKEAARILEEFGVPYEITIISAHRTPERAYEYAKKAEERGIEVIIAGAGGA 75

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                ++ASLT LPVIGVP+++  L+GLDSLLSIVQMP G+PVATVAI+NA NA LLA+R
Sbjct: 76  AHLPGIIASLTVLPVIGVPIKSKALNGLDSLLSIVQMPSGIPVATVAIDNAKNAALLALR 135

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
           +LG+  P++  ++ ++ +D K+ V  KA++LE+ GW+
Sbjct: 136 ILGIKYPEIKEKLRRYMKDMKRKVEEKAKRLEEMGWE 172

[Close]
BLAST of Cla011996 vs. Swiss-Prot
Match: PUR6_SCHOC (Phosphoribosylaminoimidazole carboxylase OS=Schwanniomyces occidentalis GN=ADE2 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-46
Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSD PVM   A +L  FGVP+E+ IVSAHRTP  M  YA+ A +RG+++IIAGAGG 
Sbjct: 399 MGSDSDLPVMSVGANILKRFGVPFELTIVSAHRTPHRMTQYAIEAPKRGLKVIIAGAGGA 458

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVA++TPLPVIGVPV+ STLDG+DSL SIVQMPRG+PVATVAINN+TNA LLAVR
Sbjct: 459 AHLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGIPVATVAINNSTNAALLAVR 518

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
           +LG  D   L+ M+Q+  + +  VL KAE+LE+ G++
Sbjct: 519 ILGAYDYKWLNEMNQYMNNMENEVLAKAERLEEVGYE 555

[Close]
BLAST of Cla011996 vs. TrEMBL
Match: A0A0A0LST5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401310 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.4e-73
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTP WMFSYA SAQERGIQ+IIAGAGG 
Sbjct: 483 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPHWMFSYASSAQERGIQVIIAGAGGA 542

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR
Sbjct: 543 AHLPGMVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 602

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVL+KAEKLE+DGWDLQ
Sbjct: 603 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLERDGWDLQ 641

[Close]
BLAST of Cla011996 vs. TrEMBL
Match: A5BS31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024806 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.4e-65
Identity = 127/151 (84.11%), Postives = 144/151 (95.36%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGGM 60
           MGSDSD PVM+DAA +L+ FGVP+E++IVSAHRTP+ MFSYA+SA+ERG+QIIIAGAGGM
Sbjct: 449 MGSDSDLPVMKDAAGILNHFGVPHEVRIVSAHRTPEMMFSYAMSARERGVQIIIAGAGGM 508

Query: 61  VASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVAD 120
           VA+LTPLPVIGVPVRAS+LDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGV+D
Sbjct: 509 VAALTPLPVIGVPVRASSLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVSD 568

Query: 121 PDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
           PDL +RMSQ+QEDTK +VL KAEKLEKDGW+
Sbjct: 569 PDLQARMSQYQEDTKDDVLVKAEKLEKDGWE 599

[Close]
BLAST of Cla011996 vs. TrEMBL
Match: U5FH92_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02430g PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.8e-64
Identity = 124/151 (82.12%), Postives = 141/151 (93.38%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGGM 60
           MGSDSD P+M+DAA++L  FGVP+E++IVSAHRTP+ MFSYALSAQ++GIQIIIAGAGGM
Sbjct: 479 MGSDSDLPIMKDAARILTVFGVPHEVRIVSAHRTPEMMFSYALSAQDQGIQIIIAGAGGM 538

Query: 61  VASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVAD 120
           VASLTPLPVIGVPVRAS LDG+DSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGV D
Sbjct: 539 VASLTPLPVIGVPVRASALDGMDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVGD 598

Query: 121 PDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
            DLL+RMSQ+QEDT+ +VL KAEKL+ DGW+
Sbjct: 599 TDLLARMSQYQEDTRDDVLKKAEKLQTDGWE 629

[Close]
BLAST of Cla011996 vs. TrEMBL
Match: U5FE79_POPTR (Phosphoribosylaminoimidazole carboxylase family protein OS=Populus trichocarpa GN=POPTR_0019s02430g PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.8e-64
Identity = 124/151 (82.12%), Postives = 141/151 (93.38%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGGM 60
           MGSDSD P+M+DAA++L  FGVP+E++IVSAHRTP+ MFSYALSAQ++GIQIIIAGAGGM
Sbjct: 506 MGSDSDLPIMKDAARILTVFGVPHEVRIVSAHRTPEMMFSYALSAQDQGIQIIIAGAGGM 565

Query: 61  VASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVAD 120
           VASLTPLPVIGVPVRAS LDG+DSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGV D
Sbjct: 566 VASLTPLPVIGVPVRASALDGMDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVGD 625

Query: 121 PDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
            DLL+RMSQ+QEDT+ +VL KAEKL+ DGW+
Sbjct: 626 TDLLARMSQYQEDTRDDVLKKAEKLQTDGWE 656

[Close]
BLAST of Cla011996 vs. TrEMBL
Match: A0A067JUN0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23523 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-63
Identity = 126/157 (80.25%), Postives = 142/157 (90.45%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSD PVM+DAA++LD F VPYE++IVSAHRTP+ MFSYALSA++RG+QIIIAGAGG 
Sbjct: 474 MGSDSDLPVMKDAARILDMFDVPYEVRIVSAHRTPEMMFSYALSARDRGVQIIIAGAGGA 533

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVASLTPLPVIGVPVRAS+LDG+DSLLSIVQMPRGVPVATVAINNATNAGLLAVR
Sbjct: 534 AHLPGMVASLTPLPVIGVPVRASSLDGMDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 593

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
           MLGV DPDLL+RMSQ+QEDT+  VL KAEKL+ DGW+
Sbjct: 594 MLGVGDPDLLARMSQYQEDTRDEVLKKAEKLQNDGWE 630

[Close]
BLAST of Cla011996 vs. NCBI nr
Match: gi|659081132|ref|XP_008441169.1| (PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 2.9e-73
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYA SAQERGI++IIAGAGG 
Sbjct: 248 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 307

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVASLTPLPVIGVPVRAS LDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR
Sbjct: 308 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 367

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVL+KAEKLEKDGWDLQ
Sbjct: 368 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 406

[Close]
BLAST of Cla011996 vs. NCBI nr
Match: gi|659081130|ref|XP_008441168.1| (PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 2.9e-73
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYA SAQERGI++IIAGAGG 
Sbjct: 483 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 542

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVASLTPLPVIGVPVRAS LDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR
Sbjct: 543 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 602

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVL+KAEKLEKDGWDLQ
Sbjct: 603 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 641

[Close]
BLAST of Cla011996 vs. NCBI nr
Match: gi|778672862|ref|XP_004138827.2| (PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 4.9e-73
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGG- 60
           MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTP WMFSYA SAQERGIQ+IIAGAGG 
Sbjct: 483 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPHWMFSYASSAQERGIQVIIAGAGGA 542

Query: 61  -----MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 120
                MVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR
Sbjct: 543 AHLPGMVASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 602

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLNKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVL+KAEKLE+DGWDLQ
Sbjct: 603 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLERDGWDLQ 641

[Close]
BLAST of Cla011996 vs. NCBI nr
Match: gi|147859592|emb|CAN83526.1| (hypothetical protein VITISV_024806 [Vitis vinifera])

HSP 1 Score: 255.8 bits (652), Expect = 4.9e-65
Identity = 127/151 (84.11%), Postives = 144/151 (95.36%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGGM 60
           MGSDSD PVM+DAA +L+ FGVP+E++IVSAHRTP+ MFSYA+SA+ERG+QIIIAGAGGM
Sbjct: 449 MGSDSDLPVMKDAAGILNHFGVPHEVRIVSAHRTPEMMFSYAMSARERGVQIIIAGAGGM 508

Query: 61  VASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVAD 120
           VA+LTPLPVIGVPVRAS+LDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGV+D
Sbjct: 509 VAALTPLPVIGVPVRASSLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVSD 568

Query: 121 PDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
           PDL +RMSQ+QEDTK +VL KAEKLEKDGW+
Sbjct: 569 PDLQARMSQYQEDTKDDVLVKAEKLEKDGWE 599

[Close]
BLAST of Cla011996 vs. NCBI nr
Match: gi|566225091|ref|XP_006370990.1| (hypothetical protein POPTR_0019s02430g [Populus trichocarpa])

HSP 1 Score: 252.3 bits (643), Expect = 5.4e-64
Identity = 124/151 (82.12%), Postives = 141/151 (93.38%), Query Frame = 1 

Query: 1   MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYALSAQERGIQIIIAGAGGM 60
           MGSDSD P+M+DAA++L  FGVP+E++IVSAHRTP+ MFSYALSAQ++GIQIIIAGAGGM
Sbjct: 479 MGSDSDLPIMKDAARILTVFGVPHEVRIVSAHRTPEMMFSYALSAQDQGIQIIIAGAGGM 538

Query: 61  VASLTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVAD 120
           VASLTPLPVIGVPVRAS LDG+DSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGV D
Sbjct: 539 VASLTPLPVIGVPVRASALDGMDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVGD 598

Query: 121 PDLLSRMSQFQEDTKKNVLNKAEKLEKDGWD 152
            DLL+RMSQ+QEDT+ +VL KAEKL+ DGW+
Sbjct: 599 TDLLARMSQYQEDTRDDVLKKAEKLQTDGWE 629

The following BLAST results are available for this feature:
BLAST of Cla011996 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUR6_VIGAC3.6e-6075.16Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment) OS=Vigna acon... [more]
PUR6_SCHPO6.5e-4964.74Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces pombe (strain 97... [more]
PURE_THEMA1.1e-4862.82N5-carboxyaminoimidazole ribonucleotide mutase OS=Thermotoga maritima (strain AT... [more]
PURE_PYRHO9.3e-4858.60N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus horikoshii (strain ... [more]
PUR6_SCHOC1.3e-4661.78Phosphoribosylaminoimidazole carboxylase OS=Schwanniomyces occidentalis GN=ADE2 ... [more]
BLAST of Cla011996 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LST5_CUCSA3.4e-7392.45Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401310 PE=3 SV=1[more]
A5BS31_VITVI3.4e-6584.11Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024806 PE=3 SV=1[more]
U5FH92_POPTR3.8e-6482.12Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02430g PE=3 SV=1[more]
U5FE79_POPTR3.8e-6482.12Phosphoribosylaminoimidazole carboxylase family protein OS=Populus trichocarpa G... [more]
A0A067JUN0_JATCU1.1e-6380.25Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23523 PE=3 SV=1[more]
BLAST of Cla011996 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081132|ref|XP_008441169.1|2.9e-7392.45PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X2 [C... [more]
gi|659081130|ref|XP_008441168.1|2.9e-7392.45PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1 [C... [more]
gi|778672862|ref|XP_004138827.2|4.9e-7392.45PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic [Cucumis sati... [more]
gi|147859592|emb|CAN83526.1|4.9e-6584.11hypothetical protein VITISV_024806 [Vitis vinifera][more]
gi|566225091|ref|XP_006370990.1|5.4e-6482.12hypothetical protein POPTR_0019s02430g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000031PurE_dom
IPR024694PurE, prokaryotic type
Vocabulary: Biological Process
TermDefinition
GO:0006189'de novo' IMP biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
cellular_component GO:0009320 phosphoribosylaminoimidazole carboxylase complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004638 phosphoribosylaminoimidazole carboxylase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU40424watermelon EST collection version 2.0transcribed_cluster
WMU53057watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011996Cla011996.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU53057WMU53057transcribed_cluster
WMU40424WMU40424transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000031PurE domainGENE3DG3DSA:3.40.50.7700coord: 1..147
score: 9.2
IPR000031PurE domainHAMAPMF_01929PurE_classIcoord: 1..142
score: 26
IPR000031PurE domainPFAMPF00731AIRCcoord: 1..136
score: 1.3
IPR000031PurE domainSMARTSM01001AIRC_2coord: 1..138
score: 2.9
IPR000031PurE domainTIGRFAMsTIGR01162TIGR01162coord: 1..145
score: 9.7
IPR000031PurE domainunknownSSF52255N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)coord: 1..149
score: 1.44
IPR024694PurE, prokaryotic typePIRPIRSF001338AIR_carboxylasecoord: 1..149
score: 3.4
NoneNo IPR availableunknownCoilCoilcoord: 128..148
scor
NoneNo IPR availablePANTHERPTHR11609PURINE BIOSYNTHESIS PROTEIN 6/7, PUR6/7coord: 1..152
score: 1.3E
NoneNo IPR availablePANTHERPTHR11609:SF5PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASEcoord: 1..152
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla011996Watermelon (Charleston Gray)wcgwmB104
Cla011996Bottle gourd (USVL1VR-Ls)lsiwmB119
Cla011996Watermelon (97103) v2wmwmbB363