Cla011962 (gene) Watermelon (97103) v1

Overview
NameCla011962
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionSac domain-containing inositol phosphatase 3-like (AHRD V1 *-*- Q6ZC71_ORYSJ)
LocationChr11 : 4464621 .. 4466511 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATGTCCTTTGGAAGATCAAAAGGTAGATCCATCTCAAAAGTTTTCTTCTCCTTTGGAAATTGAAAAGGCAATTCCTTTAAGTAGGTTTGCTGTTTCTGGGGGTGTGGTTTCTGGGAGGCTCCTTCCATCTTTTCCCCTACATTATTCTCCTAAAAAAGCTTCCACTCATTCATCCTCAATGGATGAAGTTAATGCTGCTTTACTTGGAGAAAGAAGCTCTCGTCCCCAAGTTCCGTTCCTAGTGAATTGCATTTCCACAAAGAAACCCCCTCCTTCACAAAGTTTTGATCAATGGGTATTCATTGTTCCGGACTCACAGATCAAGATTATGAGAGGAATTTTAGATAATACATATTTAAAAGATCCTTCCTTTCCACAAGATTCAGAGGTCGATTTGTCTCGGTGTAAGTAGCGAAGAGCCAGCTATTCAAGTTGATTTTTCCGAGGAAAACAATGGCGAAGCTCTAGTCAATCTTTTTGAACGCTCAAAAGAAGTAAAGGTTGATCAGGTTTCTAATGTAAAGCTCTCTCCTTTGCCTATCTCTAAAATCTCACCTAAGTTCTCCTCCATTGATGAAGTTTGTGAACTACAATTGTGCAAAATTCCTCTTCTTTCATCTTAATTTGCTGGTGGCAGAAGTTTTATTTTTAACATGATGGTCATTCTGGTTTTCATATGAAGCTCAAAGGCAATTGGTCCTTTATCTAATCATGAAAGTTTAGGCGGCTTATTAGCAATATGGGTTGAATGCAAGTTGTCAGCTCTTGAAATTCTCAAAGGAATCTTGGAAGATCAACTAAAGGCTTGCGGGACTCCATTAATTAAGTTGTTGCGGGAGTTTGTTAGATGTTCAGCTTTTGGTTGGTCCATTCTTGTTGTTTAAGTCTCAATTGTTATGATCATCTGCGGTTAAAGTCTTACCTGCGTAATTTTGTTTTGAGAAGATTCAAAGAGTTTTCAAGACTAGTCTTTCGATTGGTAGATCGCTTCAAAGTTGCTCATATTATTACCTACCCATGATGCTCTAAGCTCATTGCCGCCTTCTCCACCCAAGTTTTTTGTTTAATTTGGAATGCTTTGTTCATCTAGCCTAGTCATTATGACTTTTATCTTGGATTTGAATTTTTCTTTGTTTGGTTTATTTCTACTGTATTGCAATATAAGAGAGAAAACCTCAAATACAGTCTAACAATGGAGAGATTCTCCAAGAAAGTTTAACCCCACAAAAAATAATAATAATAATAAAAAAAATAACAGTAATCAAACCAAACACCCAGCTGATTTGAAAGAGCTGGTGACCTCTCCTGCCCAACAGTCCCGATCAGAAATTCCACACCCACTACATTCTAACCCCACTTTTGCCCTTCCTAGCATACATAACTTTAATGAGGCAGGCCTCACAGTTTTGCATGTTTCCCAGTTACTTCGTTGGCATATTATCGTTGTTATTGGGCTAAAGGTTTCCCCTTTCATAAACACAAAGTTCAAGCTCAGAAGAGAAGATAAACATACGTCTCTTATTGTCCGGAATTGTGTTTGTATTTGACTGAAGTAATTTCGGTTTGAGTTTTGTCGCTTGTGATATGACACAAATGCAAATAGCATAATTGACATGCTTTGGAATTTTGATGTACAGGGCCCTGCCATGATGTCTTTCCAGAATGATCCTGAAAGGGAGATGCACTATGCTGATCTTTTACGCACGGGTGCGATTGATGTGATTGATAATGCTTCTATTGAAGAAGACATGGAAGCGGCTTTGAAGGAGTATGATGAAATTGGTGTGGATCTTGGGATCATTCCTTCACCCTGGAAGTACTTTGCCGAAGATCCTAGTTGGTTGACTAGATGGATCATTGGAGAAGAGAAGCTGCAAAGGGTATAA

mRNA sequence

ATGCCATGTCCTTTGGAAGATCAAAAGGTAGATCCATCTCAAAAGTTTTCTTCTCCTTTGGAAATTGAAAAGGCAATTCCTTTAAGTAGGTTTGCTGTTTCTGGGGGTGTGGTTTCTGGGAGGCTCCTTCCATCTTTTCCCCTACATTATTCTCCTAAAAAAGCTTCCACTCATTCATCCTCAATGGATGAAGTTAATGCTGCTTTACTTGGAGAAAGAAGCTCTCGTCCCCAAGTTCCGTTCCTAGTGAATTGCATTTCCACAAAGAAACCCCCTCCTTCACAAAGTTTTGATCAATGGGGCCCTGCCATGATGTCTTTCCAGAATGATCCTGAAAGGGAGATGCACTATGCTGATCTTTTACGCACGGGTGCGATTGATGTGATTGATAATGCTTCTATTGAAGAAGACATGGAAGCGGCTTTGAAGGAGTATGATGAAATTGGTGTGGATCTTGGGATCATTCCTTCACCCTGGAAGTACTTTGCCGAAGATCCTAGTTGGTTGACTAGATGGATCATTGGAGAAGAGAAGCTGCAAAGGGTATAA

Coding sequence (CDS)

ATGCCATGTCCTTTGGAAGATCAAAAGGTAGATCCATCTCAAAAGTTTTCTTCTCCTTTGGAAATTGAAAAGGCAATTCCTTTAAGTAGGTTTGCTGTTTCTGGGGGTGTGGTTTCTGGGAGGCTCCTTCCATCTTTTCCCCTACATTATTCTCCTAAAAAAGCTTCCACTCATTCATCCTCAATGGATGAAGTTAATGCTGCTTTACTTGGAGAAAGAAGCTCTCGTCCCCAAGTTCCGTTCCTAGTGAATTGCATTTCCACAAAGAAACCCCCTCCTTCACAAAGTTTTGATCAATGGGGCCCTGCCATGATGTCTTTCCAGAATGATCCTGAAAGGGAGATGCACTATGCTGATCTTTTACGCACGGGTGCGATTGATGTGATTGATAATGCTTCTATTGAAGAAGACATGGAAGCGGCTTTGAAGGAGTATGATGAAATTGGTGTGGATCTTGGGATCATTCCTTCACCCTGGAAGTACTTTGCCGAAGATCCTAGTTGGTTGACTAGATGGATCATTGGAGAAGAGAAGCTGCAAAGGGTATAA

Protein sequence

MPCPLEDQKVDPSQKFSSPLEIEKAIPLSRFAVSGGVVSGRLLPSFPLHYSPKKASTHSSSMDEVNAALLGERSSRPQVPFLVNCISTKKPPPSQSFDQWGPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWKYFAEDPSWLTRWIIGEEKLQRV
Homology
[Close]
BLAST of Cla011962 vs. Swiss-Prot
Match: SAC1_ARATH (Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana GN=SAC1 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-17
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 1 

Query: 102 PAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWKY 161
           PAM  F+ND E E ++A++LR   IDV+D    E +ME+   EY +IG DLGIIP   K+
Sbjct: 831 PAMEPFENDHEFEQNFAEVLRMNTIDVMDIEEEETEMESDFNEYTQIGSDLGIIPMQCKH 890

Query: 162 FAEDPSWLTRWIIGEEKLQRV 183
           FA DP WL RW++G++K+ +V
Sbjct: 891 FASDPCWLARWLVGDDKVPKV 911

[Close]
BLAST of Cla011962 vs. TrEMBL
Match: A0A0S3TEB7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.UMG107000 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.5e-24
Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPAM  FQND ERE HYAD L T + +++++ S+  +MEAALKEYD++G DLGIIP   K
Sbjct: 3   GPAMELFQNDSEREQHYADALSTSSYEIVNDTSVATEMEAALKEYDQVGADLGIIPRSCK 62

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           +FA+DPSWLTRW+ GEEKLQR+
Sbjct: 63  FFADDPSWLTRWLTGEEKLQRI 84

[Close]
BLAST of Cla011962 vs. TrEMBL
Match: A0A0S3SEX7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G272100 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.8e-24
Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPA+  FQND ERE HYAD L T + +++++ S+  +MEAALKEYD++G DLGIIP   K
Sbjct: 823 GPALELFQNDSEREQHYADALSTSSYEIVNDTSVATEMEAALKEYDQVGADLGIIPRSCK 882

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           +FA+DPSWLTRW+ GEEKLQR+
Sbjct: 883 FFADDPSWLTRWLTGEEKLQRI 904

[Close]
BLAST of Cla011962 vs. TrEMBL
Match: A0A0S3S6E1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G186500 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.8e-24
Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPAM  FQND ERE HYAD L T + +++++ S+  +MEAALKEYD++G DLGIIP   K
Sbjct: 3   GPAMELFQNDFEREQHYADALSTSSYEIVNDTSVATEMEAALKEYDQVGADLGIIPRSCK 62

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           +FA+DPSWLTRW+ GEEKLQR+
Sbjct: 63  FFADDPSWLTRWLTGEEKLQRI 84

[Close]
BLAST of Cla011962 vs. TrEMBL
Match: A0A0B2RJH0_GLYSO (Polyphosphoinositide phosphatase OS=Glycine soja GN=glysoja_026368 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.6e-23
Identity = 47/82 (57.32%), Postives = 66/82 (80.49%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPA+  FQNDP+RE HYAD L T + +++++A++  +MEA LKEYD++G DLGIIP   K
Sbjct: 819 GPALELFQNDPDREQHYADALSTSSYEIVNDAAVAAEMEATLKEYDQVGADLGIIPKSCK 878

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           +FA+DPSWLTRW+ G+EK+ R+
Sbjct: 879 FFADDPSWLTRWLTGDEKVPRI 900

[Close]
BLAST of Cla011962 vs. TrEMBL
Match: I1LNN4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G001200 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.6e-23
Identity = 47/82 (57.32%), Postives = 66/82 (80.49%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPA+  FQNDP+RE HYAD L T + +++++A++  +MEA LKEYD++G DLGIIP   K
Sbjct: 825 GPALELFQNDPDREQHYADALSTSSYEIVNDAAVAAEMEATLKEYDQVGADLGIIPKSCK 884

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           +FA+DPSWLTRW+ G+EK+ R+
Sbjct: 885 FFADDPSWLTRWLTGDEKVPRI 906

[Close]
BLAST of Cla011962 vs. NCBI nr
Match: gi|659081081|ref|XP_008441141.1| (PREDICTED: phosphoinositide phosphatase SAC1 isoform X1 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPAMMSFQNDPEREMHYADLLR GAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSP K
Sbjct: 850 GPAMMSFQNDPEREMHYADLLRLGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPCK 909

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           YFAEDPSWLTRWIIGEEKLQR+
Sbjct: 910 YFAEDPSWLTRWIIGEEKLQRI 931

[Close]
BLAST of Cla011962 vs. NCBI nr
Match: gi|659081083|ref|XP_008441143.1| (PREDICTED: phosphoinositide phosphatase SAC1 isoform X2 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPAMMSFQNDPEREMHYADLLR GAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSP K
Sbjct: 830 GPAMMSFQNDPEREMHYADLLRLGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPCK 889

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           YFAEDPSWLTRWIIGEEKLQR+
Sbjct: 890 YFAEDPSWLTRWIIGEEKLQRI 911

[Close]
BLAST of Cla011962 vs. NCBI nr
Match: gi|778674409|ref|XP_011650204.1| (PREDICTED: phosphoinositide phosphatase SAC1 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36
Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPAMMSFQNDPEREMHYADLLR GAID+IDNASIEEDME ALKEYDEIGVDLGIIPSP K
Sbjct: 801 GPAMMSFQNDPEREMHYADLLRMGAIDMIDNASIEEDMEVALKEYDEIGVDLGIIPSPCK 860

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           +FAEDPSWLTRWIIGEEKLQR+
Sbjct: 861 FFAEDPSWLTRWIIGEEKLQRI 882

[Close]
BLAST of Cla011962 vs. NCBI nr
Match: gi|965673608|dbj|BAU03445.1| (hypothetical protein VIGAN_UM107000 [Vigna angularis var. angularis])

HSP 1 Score: 119.8 bits (299), Expect = 5.0e-24
Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPAM  FQND ERE HYAD L T + +++++ S+  +MEAALKEYD++G DLGIIP   K
Sbjct: 3   GPAMELFQNDSEREQHYADALSTSSYEIVNDTSVATEMEAALKEYDQVGADLGIIPRSCK 62

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           +FA+DPSWLTRW+ GEEKLQR+
Sbjct: 63  FFADDPSWLTRWLTGEEKLQRI 84

[Close]
BLAST of Cla011962 vs. NCBI nr
Match: gi|965604221|dbj|BAT91398.1| (hypothetical protein VIGAN_06272100 [Vigna angularis var. angularis])

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 1 

Query: 101 GPAMMSFQNDPEREMHYADLLRTGAIDVIDNASIEEDMEAALKEYDEIGVDLGIIPSPWK 160
           GPA+  FQND ERE HYAD L T + +++++ S+  +MEAALKEYD++G DLGIIP   K
Sbjct: 823 GPALELFQNDSEREQHYADALSTSSYEIVNDTSVATEMEAALKEYDQVGADLGIIPRSCK 882

Query: 161 YFAEDPSWLTRWIIGEEKLQRV 183
           +FA+DPSWLTRW+ GEEKLQR+
Sbjct: 883 FFADDPSWLTRWLTGEEKLQRI 904

The following BLAST results are available for this feature:
BLAST of Cla011962 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAC1_ARATH4.5e-1749.38Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana GN=SAC1 PE=1 SV=1[more]
BLAST of Cla011962 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S3TEB7_PHAAN3.5e-2463.41Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.UMG107000 PE=... [more]
A0A0S3SEX7_PHAAN7.8e-2462.20Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G272100 PE=... [more]
A0A0S3S6E1_PHAAN7.8e-2463.41Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G186500 PE=... [more]
A0A0B2RJH0_GLYSO8.6e-2357.32Polyphosphoinositide phosphatase OS=Glycine soja GN=glysoja_026368 PE=4 SV=1[more]
I1LNN4_SOYBN8.6e-2357.32Uncharacterized protein OS=Glycine max GN=GLYMA_12G001200 PE=4 SV=1[more]
BLAST of Cla011962 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081081|ref|XP_008441141.1|1.4e-3796.34PREDICTED: phosphoinositide phosphatase SAC1 isoform X1 [Cucumis melo][more]
gi|659081083|ref|XP_008441143.1|1.4e-3796.34PREDICTED: phosphoinositide phosphatase SAC1 isoform X2 [Cucumis melo][more]
gi|778674409|ref|XP_011650204.1|2.6e-3692.68PREDICTED: phosphoinositide phosphatase SAC1 [Cucumis sativus][more]
gi|965673608|dbj|BAU03445.1|5.0e-2463.41hypothetical protein VIGAN_UM107000 [Vigna angularis var. angularis][more]
gi|965604221|dbj|BAT91398.1|1.1e-2362.20hypothetical protein VIGAN_06272100 [Vigna angularis var. angularis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0009826 unidimensional cell growth
biological_process GO:0007033 vacuole organization
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
molecular_function GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU32032watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU64241watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011962Cla011962.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU32032WMU32032transcribed_cluster
WMU64241WMU64241transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla011962ClCG11G008630Watermelon (Charleston Gray)wcgwmB104
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla011962Melon (DHL92) v3.6.1medwmB326
Cla011962Cucumber (Chinese Long) v3cucwmB168
Cla011962Watermelon (97103) v2wmwmbB363
Cla011962Wax gourdwgowmB344
Cla011962Cucurbita maxima (Rimu)cmawmB285
Cla011962Cucurbita moschata (Rifu)cmowmB276
Cla011962Cucurbita moschata (Rifu)cmowmB735
Cla011962Wild cucumber (PI 183967)cpiwmB159
Cla011962Melon (DHL92) v3.5.1mewmB329
Cla011962Cucumber (Chinese Long) v2cuwmB159
Cla011962Cucurbita pepo (Zucchini)cpewmB197
Cla011962Bottle gourd (USVL1VR-Ls)lsiwmB112
Cla011962Cucumber (Gy14) v2cgybwmB149