Cla011797 (gene) Watermelon (97103) v1

Overview
NameCla011797
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr7 : 10020246 .. 10020923 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTACTTTGCGGAGCATGTCTCGTCTGGAAAAGCACAGCTCGTAATCCTTGCAGAGAGGCACCAGTCTGTACAGAGTGGACTTACCTTTACTGTGGAGGCTCCTCTAACTGGTTTATTTTCGGATGTTTGGCCAGAGCTGGATGATGATATGACCCTCCCCGAGTTATCTGTTGAGGTGCCTTTTCATCAGGGGGAAAAGGTATGGATCTTAAGGTCGCCGATTCATGACACGGCCCCTTCCTCAGATCCATTGTTAACTCTCGGGCGGCGAATGCTAGAAGGCGAGACCCGCTGGAGCACCGTTGTGAAGGTCCCAGGTGAATTTACTTTGACCGACTGCTATTGGGAATGGTTGGAGCTCGTAGTTAGCCGAAATGAACGATTTCTTCACGACGTTCGTTTGTTTAATGTTGTGATGGCCTCTTCATATACATATGATCGTAATAACGACGTGGTTCGGGCTTTTTGTGAGGCTTGGTGTCTGTCTACTAACACTCTCCATACCATGGCGGGCGAAGTATCCACTTCCCTATGCATTATGTCCATGGCTGGCTGGCCCACTACTTCAACACACATTACCTTGTTCCTGTGGATGTGCGAGGTCCTAAGATGGCCAATTTTTCTAGAGAAGGTGACTCGATCTATTTCGGGGAATACGAAGCTCGAGAGTTAA

mRNA sequence

ATGGTTTACTTTGCGGAGCATGTCTCGTCTGGAAAAGCACAGCTCGTAATCCTTGCAGAGAGGCACCAGTCTGTACAGAGTGGACTTACCTTTACTGTGGAGGCTCCTCTAACTGGTTTATTTTCGGATGTTTGGCCAGAGCTGGATGATGATATGACCCTCCCCGAGTTATCTGTTGAGGTGCCTTTTCATCAGGGGGAAAAGGTATGGATCTTAAGGTCGCCGATTCATGACACGGCCCCTTCCTCAGATCCATTGTTAACTCTCGGGCGGCGAATGCTAGAAGGCGAGACCCGCTGGAGCACCGTTGTGAAGGTCCCAGGTGAATTTACTTTGACCGACTGCTATTGGGAATGGTTGGAGCTCGTAGTTAGCCGAAATGAACGATTTCTTCACGACGTTCGTTTGTTTAATGTTGTGATGGCCTCTTCATATACATATGATCGTAATAACGACGTGGTTCGGGCTTTTTGTGAGGCTTGGTGTCTGTCTACTAACACTCTCCATACCATGGCGGGCGAAGTATCCACTTCCCTATGCATTATGTCCATGGCTGGCTGGCCCACTACTTCAACACACATTACCTTGTTCCTGTGGATGTGCGAGGTCCTAAGATGGCCAATTTTTCTAGAGAAGGTGACTCGATCTATTTCGGGGAATACGAAGCTCGAGAGTTAA

Coding sequence (CDS)

ATGGTTTACTTTGCGGAGCATGTCTCGTCTGGAAAAGCACAGCTCGTAATCCTTGCAGAGAGGCACCAGTCTGTACAGAGTGGACTTACCTTTACTGTGGAGGCTCCTCTAACTGGTTTATTTTCGGATGTTTGGCCAGAGCTGGATGATGATATGACCCTCCCCGAGTTATCTGTTGAGGTGCCTTTTCATCAGGGGGAAAAGGTATGGATCTTAAGGTCGCCGATTCATGACACGGCCCCTTCCTCAGATCCATTGTTAACTCTCGGGCGGCGAATGCTAGAAGGCGAGACCCGCTGGAGCACCGTTGTGAAGGTCCCAGGTGAATTTACTTTGACCGACTGCTATTGGGAATGGTTGGAGCTCGTAGTTAGCCGAAATGAACGATTTCTTCACGACGTTCGTTTGTTTAATGTTGTGATGGCCTCTTCATATACATATGATCGTAATAACGACGTGGTTCGGGCTTTTTGTGAGGCTTGGTGTCTGTCTACTAACACTCTCCATACCATGGCGGGCGAAGTATCCACTTCCCTATGCATTATGTCCATGGCTGGCTGGCCCACTACTTCAACACACATTACCTTGTTCCTGTGGATGTGCGAGGTCCTAAGATGGCCAATTTTTCTAGAGAAGGTGACTCGATCTATTTCGGGGAATACGAAGCTCGAGAGTTAA

Protein sequence

MVYFAEHVSSGKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSVEVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYWEWLELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVSTSLCIMSMAGWPTTSTHITLFLWMCEVLRWPIFLEKVTRSISGNTKLES
Homology
[Close]
BLAST of Cla011797 vs. TrEMBL
Match: M1AKM4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009586 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.0e-22
Identity = 57/189 (30.16%), Postives = 103/189 (54.50%), Query Frame = 1 

Query: 1   MVYFAEHVSSGKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSVE 60
           M  F +++S       ++ E  +  +  + F    PL G +++ WP L     +   +  
Sbjct: 1   MTIFRQYISHSTRLRHLIVETEEGGEQ-IRFLTHDPLVGRYANQWPSLKKPFHMANWT-S 60

Query: 61  VPFHQGE---KVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYW 120
           V  H      ++W L++P H     +  L +LGRR+++G+ RW + ++V GE+     YW
Sbjct: 61  VHTHTSNNLLRLWSLQAPYHHHTNIATHLPSLGRRIIQGDIRWGSTMEVEGEYHHIPGYW 120

Query: 121 EWLELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVST 180
           +W E ++  ++  L+  ++++ + AS +TYDRN+++ +AFCEAWC  TNTL T   E+S 
Sbjct: 121 KWTEDILGISQEVLNTAQIYDAIYASLFTYDRNSNIFQAFCEAWCPKTNTLLTSVEELSI 180

Query: 181 SLCIMSMAG 187
           SL  + + G
Sbjct: 181 SLWDLHILG 187

[Close]
BLAST of Cla011797 vs. TrEMBL
Match: A0A0J8CE03_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g104850 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 62/182 (34.07%), Postives = 95/182 (52.20%), Query Frame = 1 

Query: 1   MVYFAEHVSSGKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSVE 60
           MVYF E        L ++      +++G+TF +   L      +   ++    L E+SV+
Sbjct: 1   MVYFKEFKHGDDIHLSLIDNEEDDLRTGITFVIHKSLLRP-DGMHTHINKGSLLSEMSVK 60

Query: 61  VP--FHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRW-STVVKVPGEFTLTDCYW 120
           V    H    +++L+S + D          LGRR++ G  RW S  +++ GE      YW
Sbjct: 61  VSKGSHDVTPMYVLKSTVRDNFELPTSSSMLGRRIISGSVRWGSKSLRISGEAVYLPGYW 120

Query: 121 EWLELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVST 180
           EW E V+SR    L    ++  V AS + YD+N D++R+FCE+WC ++NTLHTM GE S 
Sbjct: 121 EWTEDVLSRFGSILDSCSIYPAVQASLFLYDKNPDIIRSFCESWCPTSNTLHTMTGEWSI 180

[Close]
BLAST of Cla011797 vs. TrEMBL
Match: M1BMX6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018974 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-21
Identity = 63/189 (33.33%), Postives = 101/189 (53.44%), Query Frame = 1 

Query: 1   MVYFAEHVS-SGKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSV 60
           MV+F ++   S + + +I+     +V++   F V+    G + D WP+L + + +   + 
Sbjct: 1   MVFFKDYTCPSSQLKYLIVGTEGSTVET--KFLVQDSFVGRYVDPWPQLRNTLHMRSWTS 60

Query: 61  EVPF--HQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYW 120
           E     ++  K W L  P       +  L  LGRRM+  E  W   + + GE+     YW
Sbjct: 61  EYDHKSNKASKAWYLDKPNPQCKNIASTLSNLGRRMILEELCWGDNIVLEGEYHYILGYW 120

Query: 121 EWLELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVST 180
           EW E V+S+N + L++  + + V AS +TYDRN ++++AFCEAWC  TNTL T  GE S 
Sbjct: 121 EWTEDVLSKNGQSLNNACISDAVFASFFTYDRNYNIIQAFCEAWCPQTNTLLTSIGETSI 180

Query: 181 SLCIMSMAG 187
           SL  + + G
Sbjct: 181 SLWDLHILG 187

[Close]
BLAST of Cla011797 vs. TrEMBL
Match: M1DL39_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400040325 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.8e-21
Identity = 60/189 (31.75%), Postives = 100/189 (52.91%), Query Frame = 1 

Query: 1   MVYFAEHVS-SGKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSV 60
           M++F ++   S + + +I+     +V++   F V+    G + D WP+L + + +   + 
Sbjct: 1   MIFFKDYTCPSSQLKYLIVGTEGSTVET--KFLVQDSFVGRYVDPWPQLRNTLHMRSWTF 60

Query: 61  EVPF--HQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYW 120
           E     ++  KVW L  P       +  L  LGR M+  E  W   + + GE+     YW
Sbjct: 61  EYDHKSNKASKVWYLEKPNPQCTNIASTLSNLGRHMILEELHWGDNIVLEGEYHCIPGYW 120

Query: 121 EWLELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVST 180
           EW E V+S+N + L++  + + V A  +TYDRN+++++AFCEAWC  TNTL T   E S 
Sbjct: 121 EWTEDVLSKNGQSLNNACISDAVFAYLFTYDRNSNIIQAFCEAWCPQTNTLLTSTRETSI 180

Query: 181 SLCIMSMAG 187
           SL  + + G
Sbjct: 181 SLWDLHILG 187

[Close]
BLAST of Cla011797 vs. TrEMBL
Match: M0ZLB0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001285 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.6e-21
Identity = 61/189 (32.28%), Postives = 100/189 (52.91%), Query Frame = 1 

Query: 1   MVYFAEHVS-SGKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSV 60
           MV+F ++   S + + +I+     +V++   F V+    G + D WP+L + + +   + 
Sbjct: 1   MVFFKDYTCPSSQLKYLIVGTEGSTVET--KFLVQDSFVGRYVDPWPQLRNTLHMRSWTS 60

Query: 61  EVPF--HQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYW 120
           E     ++  K W L  P       +  L  LG RM+  E  W   + + GE+     YW
Sbjct: 61  EYDHKSNKASKEWYLEKPNPQRTNIASTLSNLGHRMILEELCWGDNIVLEGEYHCIPGYW 120

Query: 121 EWLELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVST 180
           EW E V+S+N + L++  + + V AS +TYDRN+++++AFCEAWC  TN L T  GE S 
Sbjct: 121 EWTEDVLSKNGQSLNNACISDAVFASLFTYDRNSNIIQAFCEAWCPKTNILLTSTGETSI 180

Query: 181 SLCIMSMAG 187
           SL  + + G
Sbjct: 181 SLWDLHILG 187

[Close]
BLAST of Cla011797 vs. NCBI nr
Match: gi|659082744|ref|XP_008442010.1| (PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo])

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 79/152 (51.97%), Postives = 104/152 (68.42%), Query Frame = 1 

Query: 1   MVYFAEHVSSGKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSVE 60
           M+YF E    G   LV+  +R+Q  + GL+  VE P TG F+D WP LD+   LP LSVE
Sbjct: 8   MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67

Query: 61  VPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYWEWL 120
           +P  +G+  W+L+S IH+  P+SD +LTLG+ ++EG+TRW T+ KVP EF  TDCYWEWL
Sbjct: 68  IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 127

Query: 121 ELVVSRNERFLHDVRLFNVVMASSYTYDRNND 153
           ELVV RN R L+   L++VV    YTYDRN+D
Sbjct: 128 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 159

[Close]
BLAST of Cla011797 vs. NCBI nr
Match: gi|848853669|ref|XP_012844633.1| (PREDICTED: uncharacterized protein LOC105964676 [Erythranthe guttata])

HSP 1 Score: 142.5 bits (358), Expect = 8.9e-31
Identity = 78/192 (40.62%), Postives = 110/192 (57.29%), Query Frame = 1 

Query: 1   MVYFAEHVSS-GKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSV 60
           MVYF +  S  G  QLV+L +  Q +  G T  V  PL G +   WP L     + E + 
Sbjct: 4   MVYFKDTRSPLGVEQLVVLDDERQPLDKGTTLVVHTPLIGKYPMQWPRLTSTYNINEWTH 63

Query: 61  EVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYWEW 120
           EV   +  KVW L++  H  +     L TLG  +++G+  W   ++  GEF  T  YWEW
Sbjct: 64  EVSLSKTLKVWTLQTSHHKYSDEIVHLPTLGHNIIKGKAMWGESLQFTGEFHYTPGYWEW 123

Query: 121 LELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVSTSL 180
            E V+SR E  L   +L++ V AS +TYDRN+++++AFCEAWC +TNTL T  GE+S SL
Sbjct: 124 TEDVLSRCESKLISAQLYDAVYASLFTYDRNSEIIKAFCEAWCPTTNTLLTSLGELSLSL 183

Query: 181 C-IMSMAGWPTT 191
             + ++AG P T
Sbjct: 184 WDLNTLAGLPLT 195

[Close]
BLAST of Cla011797 vs. NCBI nr
Match: gi|848857215|ref|XP_012828660.1| (PREDICTED: uncharacterized protein LOC105949899 [Erythranthe guttata])

HSP 1 Score: 133.3 bits (334), Expect = 5.4e-28
Identity = 74/192 (38.54%), Postives = 106/192 (55.21%), Query Frame = 1 

Query: 1   MVYFAEHVSS-GKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDVWPELDDDMTLPELSV 60
           M YF +  S  G  QLV+L +  Q +  G T  V   L G +   WP L     + E + 
Sbjct: 1   MAYFKDTRSPLGVEQLVVLDDERQPLDKGTTMVVHTSLIGRYPMQWPRLTSTYNINEWTH 60

Query: 61  EVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYWEW 120
           EV   +  KVW L++  H  +     L TLG  +++G+  W   ++  GEF  T  YWEW
Sbjct: 61  EVSLSKTLKVWTLQTSHHKYSDEIVHLPTLGNNIIKGKAMWGESLQFTGEFHYTAGYWEW 120

Query: 121 LELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVSTSL 180
            E V+SR E  L   ++++ V AS +TYDRN+++++ FCEAWC  TNTL T  GE+S SL
Sbjct: 121 TEDVLSRCESKLISAQIYDSVYASLFTYDRNSEIIKVFCEAWCPITNTLLTSLGELSLSL 180

Query: 181 C-IMSMAGWPTT 191
             + ++AG P T
Sbjct: 181 WDLNTLAGLPLT 192

[Close]
BLAST of Cla011797 vs. NCBI nr
Match: gi|659098612|ref|XP_008450227.1| (PREDICTED: uncharacterized protein LOC103491890 [Cucumis melo])

HSP 1 Score: 112.8 bits (281), Expect = 7.6e-22
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 87  LTLGRRMLEGETRWSTVVKVPGEFTLTDCYWEWLELVVSRNERFLHDVRLFNVVMASSYT 146
           LTLG+R++E + RW TV KVP EF  +DCYWEWLELVV RN R L+  RL+ +V AS YT
Sbjct: 210 LTLGQRLIECQIRWGTVTKVPREFCFSDCYWEWLELVVGRNTRLLYSTRLYGIVTASLYT 269

Query: 147 YDRNNDVVRAFCEA 161
           YDRN+DVVRAFCEA
Sbjct: 270 YDRNSDVVRAFCEA 283

[Close]
BLAST of Cla011797 vs. NCBI nr
Match: gi|698515289|ref|XP_009802520.1| (PREDICTED: uncharacterized protein LOC104248035 [Nicotiana sylvestris])

HSP 1 Score: 112.8 bits (281), Expect = 7.6e-22
Identity = 69/195 (35.38%), Postives = 105/195 (53.85%), Query Frame = 1 

Query: 1   MVYFAE-HVSSGKAQLVILAERHQSVQSGLTFTVEAPLTGLFSDV-WPELDDDMTLPELS 60
           MVYF +  +SS  +Q +I+++ H+  + G    V   L G ++   W  L   + L + +
Sbjct: 1   MVYFKDSRISSSNSQCLIISD-HKGSKEGTRLLVGRTLIGQYATTSWVPLRAPLYLADWT 60

Query: 61  VEVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTVVKVPGEFTLTDCYWE 120
           +E    +  K W+  +  H     +  LL L RR++  ET W   +   GEF     YWE
Sbjct: 61  LEYN-SRPPKTWMFCTTTHRAWNVASTLLCLWRRIVNKETYWGNDLPFGGEFHYVPGYWE 120

Query: 121 WLELVVSRNERFLHDVRLFNVVMASSYTYDRNNDVVRAFCEAWCLSTNTLHTMAGEVSTS 180
           W E V+SR    L   R+++ V AS +TYDRN ++++AFCEAWC  TNTL T  GE+S S
Sbjct: 121 WAEDVLSRCRLSLEGARIYDAVYASLFTYDRNTNIMQAFCEAWCPVTNTLLTSVGELSIS 180

Query: 181 LC-IMSMAGWPTTST 193
           L  +  ++G P T +
Sbjct: 181 LWDLYKISGLPITGS 193

The following BLAST results are available for this feature:
BLAST of Cla011797 vs. TrEMBL
Match NameE-valueIdentityDescription
M1AKM4_SOLTU4.0e-2230.16Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009586 PE=4 SV=1[more]
A0A0J8CE03_BETVU1.2e-2134.07Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g104850 PE=4 S... [more]
M1BMX6_SOLTU3.4e-2133.33Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018974 PE=4 SV=1[more]
M1DL39_SOLTU5.8e-2131.75Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400040325 PE=4 SV=1[more]
M0ZLB0_SOLTU7.6e-2132.28Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001285 PE=4 SV=1[more]
BLAST of Cla011797 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082744|ref|XP_008442010.1|2.1e-4051.97PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo][more]
gi|848853669|ref|XP_012844633.1|8.9e-3140.63PREDICTED: uncharacterized protein LOC105964676 [Erythranthe guttata][more]
gi|848857215|ref|XP_012828660.1|5.4e-2838.54PREDICTED: uncharacterized protein LOC105949899 [Erythranthe guttata][more]
gi|659098612|ref|XP_008450227.1|7.6e-2267.57PREDICTED: uncharacterized protein LOC103491890 [Cucumis melo][more]
gi|698515289|ref|XP_009802520.1|7.6e-2235.38PREDICTED: uncharacterized protein LOC104248035 [Nicotiana sylvestris][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU63831watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011797Cla011797.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU63831WMU63831transcribed_cluster