Cla011676 (gene) Watermelon (97103) v1

NameCla011676
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- D7KIB0_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr4 : 6000621 .. 6001979 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCATCTCTCCAACTCCACTCCATCTCCTTCTCCACTCACCTCCTCGACCAAACCCTCCTTCGCCTCACCCACCACTCCAAAATCGCCCTCTCCCTCTTTCACTACGCCAAATCCCTCCCCTTCAACCCCCTCTCCACTTCCTCCTACAACATCCTCATCGACATCCTCGCCAAAGTCCGCCAGTTCGACGCCGCCTGGCATCTCATTCTTCAAATGGACCACAAGGGCACCCACACTTTCCTCTTGCTGATTCGCCGCTTGATTTCCGCAGGTCTCACTCGCCAGGCCATTCGGGCGTTTGATGACATTGAAGGGCTTACTGGAAATAAGGTACGAATCGATGGATTTTGCTATTTGCTGGATACCCTTTGTAAATATGGCTATGTCAAAGTTGCGGTGGAGGTTTTTAACAAGAGGAAGGGGGAGTTTGGTGTTGATGCGAAGATTTTTACGATTTTGATATATGGGTGGTGTAAGATTGGGCGATTTGAGATGGGGGAGAGGTTTTTGAAGGATATGGTGGGGCGTGGGATTGAGCCGAATGTGGTTACTTATAATGTTTTGTTGAATGGGGTTTGCAGGAGAGCGAGTTTGCACCCGGAGGGGAGGTTTGAGAAGACGATAAGGAATGCCGAGAAGGTGTTTGATGAAATGCGACAGAGAGGGATTGAGCCTGATGTAACGAGCTTTTCTATTGTGCTTCATGTTTATAGCCGTGCCCACAAGCCGGAATTGTCACTTGATAAGTTGAAGCAGATGAAAGAGCTCGGGATCTCTCCCACTGTGGCAACTTATACTTCGGTGATCAAATGCCTCTGTTCTTGTGGGAGGCTTGAGGATGCTGAAAACTTGTTTGGAGAAATGGTGAGAAGTGGAATTTCTCCATCCCCTGCAACTTATAACTGTTTCTTCAAAGAGTACAGAGGTAGAAAGGATGGGGCTGGTGCTTTGAGGTTGTACAAGAAAATGAGGGAGGATTGTTTATGTGTTCCTAGTTTGCATACCTATAACATATTACTGAGCTTGTTTCTGAACCTGGACAAGAAGGAGACTCTGAAAGAGGTGTGGAATGATATGAAAGAGAGGGGTAGAGGGCCAGATTTGGATTCATATACGACGATGATCCATGGGTTGTGTGAGAAGCAGAGATGGAGAGAGGCTTGTCAATTTTTTGTTGAGATGATTGAAAGGGGGTTTCTTCCTCAGAAGGTTACCTTTGAGATGCTTTACAGAGGGTTGATACAGTCTGATATGTTGAGAACTTGGAGGAGATTGAAGAAGAAACTGGAAGAAGAGTCTATAACATATGGCTCTGAGTTCAAAAATTATCACATTAAGCCTTATATGAGATGA

mRNA sequence

ATGGAATCATCTCTCCAACTCCACTCCATCTCCTTCTCCACTCACCTCCTCGACCAAACCCTCCTTCGCCTCACCCACCACTCCAAAATCGCCCTCTCCCTCTTTCACTACGCCAAATCCCTCCCCTTCAACCCCCTCTCCACTTCCTCCTACAACATCCTCATCGACATCCTCGCCAAAGTCCGCCAGTTCGACGCCGCCTGGCATCTCATTCTTCAAATGGACCACAAGGGCACCCACACTTTCCTCTTGCTGATTCGCCGCTTGATTTCCGCAGGTCTCACTCGCCAGGCCATTCGGGCGTTTGATGACATTGAAGGGCTTACTGGAAATAAGGTACGAATCGATGGATTTTGCTATTTGCTGGATACCCTTTGTAAATATGGCTATGTCAAAGTTGCGGTGGAGGTTTTTAACAAGAGGAAGGGGGAGTTTGGTGTTGATGCGAAGATTTTTACGATTTTGATATATGGGTGGTGTAAGATTGGGCGATTTGAGATGGGGGAGAGGTTTTTGAAGGATATGGTGGGGCGTGGGATTGAGCCGAATGTGGTTACTTATAATGTTTTGTTGAATGGGGTTTGCAGGAGAGCGAGTTTGCACCCGGAGGGGAGGTTTGAGAAGACGATAAGGAATGCCGAGAAGGTGTTTGATGAAATGCGACAGAGAGGGATTGAGCCTGATGTAACGAGCTTTTCTATTGTGCTTCATGTTTATAGCCGTGCCCACAAGCCGGAATTGTCACTTGATAAGTTGAAGCAGATGAAAGAGCTCGGGATCTCTCCCACTGTGGCAACTTATACTTCGGTGATCAAATGCCTCTGTTCTTGTGGGAGGCTTGAGGATGCTGAAAACTTGTTTGGAGAAATGGTGAGAAGTGGAATTTCTCCATCCCCTGCAACTTATAACTGTTTCTTCAAAGAGTACAGAGGTAGAAAGGATGGGGCTGGTGCTTTGAGGTTGTACAAGAAAATGAGGGAGGATTGTTTATGTGTTCCTAGTTTGCATACCTATAACATATTACTGAGCTTGTTTCTGAACCTGGACAAGAAGGAGACTCTGAAAGAGGTGTGGAATGATATGAAAGAGAGGGGTAGAGGGCCAGATTTGGATTCATATACGACGATGATCCATGGGTTGTGTGAGAAGCAGAGATGGAGAGAGGCTTGTCAATTTTTTGTTGAGATGATTGAAAGGGGGTTTCTTCCTCAGAAGGTTACCTTTGAGATGCTTTACAGAGGGTTGATACAGTCTGATATGTTGAGAACTTGGAGGAGATTGAAGAAGAAACTGGAAGAAGAGTCTATAACATATGGCTCTGAGTTCAAAAATTATCACATTAAGCCTTATATGAGATGA

Coding sequence (CDS)

ATGGAATCATCTCTCCAACTCCACTCCATCTCCTTCTCCACTCACCTCCTCGACCAAACCCTCCTTCGCCTCACCCACCACTCCAAAATCGCCCTCTCCCTCTTTCACTACGCCAAATCCCTCCCCTTCAACCCCCTCTCCACTTCCTCCTACAACATCCTCATCGACATCCTCGCCAAAGTCCGCCAGTTCGACGCCGCCTGGCATCTCATTCTTCAAATGGACCACAAGGGCACCCACACTTTCCTCTTGCTGATTCGCCGCTTGATTTCCGCAGGTCTCACTCGCCAGGCCATTCGGGCGTTTGATGACATTGAAGGGCTTACTGGAAATAAGGTACGAATCGATGGATTTTGCTATTTGCTGGATACCCTTTGTAAATATGGCTATGTCAAAGTTGCGGTGGAGGTTTTTAACAAGAGGAAGGGGGAGTTTGGTGTTGATGCGAAGATTTTTACGATTTTGATATATGGGTGGTGTAAGATTGGGCGATTTGAGATGGGGGAGAGGTTTTTGAAGGATATGGTGGGGCGTGGGATTGAGCCGAATGTGGTTACTTATAATGTTTTGTTGAATGGGGTTTGCAGGAGAGCGAGTTTGCACCCGGAGGGGAGGTTTGAGAAGACGATAAGGAATGCCGAGAAGGTGTTTGATGAAATGCGACAGAGAGGGATTGAGCCTGATGTAACGAGCTTTTCTATTGTGCTTCATGTTTATAGCCGTGCCCACAAGCCGGAATTGTCACTTGATAAGTTGAAGCAGATGAAAGAGCTCGGGATCTCTCCCACTGTGGCAACTTATACTTCGGTGATCAAATGCCTCTGTTCTTGTGGGAGGCTTGAGGATGCTGAAAACTTGTTTGGAGAAATGGTGAGAAGTGGAATTTCTCCATCCCCTGCAACTTATAACTGTTTCTTCAAAGAGTACAGAGGTAGAAAGGATGGGGCTGGTGCTTTGAGGTTGTACAAGAAAATGAGGGAGGATTGTTTATGTGTTCCTAGTTTGCATACCTATAACATATTACTGAGCTTGTTTCTGAACCTGGACAAGAAGGAGACTCTGAAAGAGGTGTGGAATGATATGAAAGAGAGGGGTAGAGGGCCAGATTTGGATTCATATACGACGATGATCCATGGGTTGTGTGAGAAGCAGAGATGGAGAGAGGCTTGTCAATTTTTTGTTGAGATGATTGAAAGGGGGTTTCTTCCTCAGAAGGTTACCTTTGAGATGCTTTACAGAGGGTTGATACAGTCTGATATGTTGAGAACTTGGAGGAGATTGAAGAAGAAACTGGAAGAAGAGTCTATAACATATGGCTCTGAGTTCAAAAATTATCACATTAAGCCTTATATGAGATGA

Protein sequence

MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKGTHTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRIDGFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMVGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKEVWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR
BLAST of Cla011676 vs. Swiss-Prot
Match: PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 8.8e-179
Identity = 303/453 (66.89%), Postives = 366/453 (80.79%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQL+ IS + +L+ QTLLRL H+SKIALS F Y +SLP    + +S+N++IDIL +
Sbjct: 58  MESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGR 117

Query: 61  VRQFDAAWHLILQMDHKGTHTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNK-VRIDGFC 120
           VRQFD    LI++MD     TFL+L++RLI+AGLTRQA+RAFDD      N+  R+  F 
Sbjct: 118 VRQFDVVRQLIVEMDQTSPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRLVEFG 177

Query: 121 YLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMVGRG 180
           +LLDTLCKYGY K+AV VFN+RK EFG D K++TILI GWCK+ R +M E+FL +M+  G
Sbjct: 178 FLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESG 237

Query: 181 IEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVLHVY 240
           IEPNVVTYNVLLNG+CR ASLHPE RFE+ +RNAEKVFDEMRQRGIEPDVTSFSIVLH+Y
Sbjct: 238 IEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHMY 297

Query: 241 SRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGISPSP 300
           SRAHK EL+LDK+K MK  GISPT+ TYTSV+KCLCSCGRLE+AE L   MV SGISPS 
Sbjct: 298 SRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSS 357

Query: 301 ATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKEVWN 360
           ATYNCFFKEY+GRKD  GA+ LY+KM+   LC PS  TYN+LL  F+NL K ET+KE+W+
Sbjct: 358 ATYNCFFKEYKGRKDANGAMNLYRKMKNG-LCKPSTQTYNVLLGTFINLGKMETVKEIWD 417

Query: 361 DMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSD 420
           D+K    GPDLDSYT+++HGLC K++W+EAC +FVEMIERGFLPQK+TFE LY+GLIQS+
Sbjct: 418 DLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSN 477

Query: 421 MLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
            +RTWRRLKKKL+EESIT+GSEF+ Y  +PY R
Sbjct: 478 KMRTWRRLKKKLDEESITFGSEFQRYPFEPYKR 509

BLAST of Cla011676 vs. Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-50
Identity = 124/414 (29.95%), Postives = 207/414 (50.00%), Query Frame = 1

Query: 31  ALSLFHYAKSLP-FNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKGTH----TFLLL 90
           +L+ F++A S   ++  S   YN +ID+  KVRQFD AWHLI  M  +       TF +L
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 91  IRRLISAGLTRQAIRAFDDIE--GLTGNKVRIDGFCYLLDTLCKYGYVKVAVEVFNKRKG 150
           IRR + AGL  +A+  F+ +E  G   +K+    F  ++  L +      A   F+  K 
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKI---AFSIVISNLSRKRRASEAQSFFDSLKD 252

Query: 151 EFGVDAKIFTILIYGWCKIGRFEMGERFLKDMVGRGIEPNVVTYNVLLNGVCRRASLHPE 210
            F  D  ++T L+ GWC+ G     E+  K+M   GIEPNV TY+++++ +CR       
Sbjct: 253 RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ---- 312

Query: 211 GRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPT 270
                 I  A  VF +M   G  P+  +F+ ++ V+ +A + E  L    QMK+LG  P 
Sbjct: 313 ------ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 372

Query: 271 VATYTSVIKCLCSCGRLEDAENLFGEMVRSGISPSPATYNCFFKEYRGRKDGAGALRLYK 330
             TY  +I+  C    LE+A  +   M++     + +T+N  F+    ++D  GA R+Y 
Sbjct: 373 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 432

Query: 331 KMREDCLCVPSLHTYNILLSLFLNLDKKETLKEVWNDMKERGRGPDLDSYTTMIHGLCEK 390
           KM E   C P+  TYNIL+ +F+     + + ++  +M ++   P++++Y  ++   C  
Sbjct: 433 KMME-AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGM 492

Query: 391 QRWREACQFFVEMIERGFL-PQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESI 437
             W  A + F EM+E   L P    +EM+   L ++  L+    L +K+ ++ +
Sbjct: 493 GHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532

BLAST of Cla011676 vs. Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-48
Identity = 127/420 (30.24%), Postives = 211/420 (50.24%), Query Frame = 1

Query: 5   LQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPL-STSSYNILIDILAKVRQ 64
           L   +  ++ +L++  L RL +H   AL  FH+  +     +   SS+++ IDI A++  
Sbjct: 47  LSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHL 106

Query: 65  FDAAWHLILQMDH----KGTHTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRIDGFC 124
               W LI +M          TF ++  R  SAG   +A++ F ++    G    +  F 
Sbjct: 107 HPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHE-HGCFQDLASFN 166

Query: 125 YLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMVGRG 184
            +LD LCK   V+ A E+F   +G F VD   + +++ GWC I R       LK+MV RG
Sbjct: 167 TILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 226

Query: 185 IEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVLHVY 244
           I PN+ TYN +L G  R             IR+A + F EM++R  E DV +++ V+H +
Sbjct: 227 INPNLTTYNTMLKGFFRAGQ----------IRHAWEFFLEMKKRDCEIDVVTYTTVVHGF 286

Query: 245 SRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGISPSP 304
             A + + + +   +M   G+ P+VATY ++I+ LC    +E+A  +F EMVR G  P+ 
Sbjct: 287 GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNV 346

Query: 305 ATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKEVWN 364
            TYN   +      + +    L ++M  +  C P+  TYN+++  +    + E    ++ 
Sbjct: 347 TTYNVLIRGLFHAGEFSRGEELMQRMENEG-CEPNFQTYNMMIRYYSECSEVEKALGLFE 406

Query: 365 DMKERGRGPDLDSYTTMIHGLCEKQRWRE---ACQFFVEMIERGFLPQKVTFEMLYRGLI 417
            M      P+LD+Y  +I G+  ++R  +   A +  +EM+ERGF+P+K TF  +  GL+
Sbjct: 407 KMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLL 454


HSP 2 Score: 87.8 bits (216), Expect = 3.3e-16
Identity = 65/240 (27.08%), Postives = 106/240 (44.17%), Query Frame = 1

Query: 213 AEKVFDEMRQRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIK 272
           A K+F  M + G   D+ SF+ +L V  ++ + E + +  + ++      TV TY  ++ 
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILN 204

Query: 273 CLCSCGRLEDAENLFGEMVRSGISPSPATYNCFFKEY--RGRKDGAGALRLYKKMREDCL 332
             C   R   A  +  EMV  GI+P+  TYN   K +   G+   A    L  K R+   
Sbjct: 205 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD--- 264

Query: 333 CVPSLHTYNILLSLFLNLDKKETLKEVWNDMKERGRGPDLDSYTTMIHGLCEKQRWREAC 392
           C   + TY  ++  F    + +  + V+++M   G  P + +Y  MI  LC+K     A 
Sbjct: 265 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 324

Query: 393 QFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPY 451
             F EM+ RG+ P   T+ +L RGL  +        L +++E E      +  N  I+ Y
Sbjct: 325 VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYY 380

BLAST of Cla011676 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 3.0e-46
Identity = 115/436 (26.38%), Postives = 216/436 (49.54%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           ++S+L    +  S  +++  L R  +   +    F +++       S  +Y+++I+  AK
Sbjct: 87  LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146

Query: 61  VRQFDAAWHLILQMDHK---GTHTFLLLIRRLISAGLTRQAIRAFDDIE--GLTGNKVRI 120
           +RQ+   W LI  M  K      TF +++R+   A    +AI AF+ +E   L  N V  
Sbjct: 147 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 206

Query: 121 DGFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDM 180
           +G   LL  LCK   V+ A EVF   +  F  D+K ++IL+ GW K           ++M
Sbjct: 207 NG---LLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREM 266

Query: 181 VGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIV 240
           +  G  P++VTY+++++ +C+       GR ++ +     +   M     +P    +S++
Sbjct: 267 IDAGCHPDIVTYSIMVDILCKA------GRVDEALG----IVRSMDPSICKPTTFIYSVL 326

Query: 241 LHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGI 300
           +H Y   ++ E ++D   +M+  G+   VA + S+I   C   R+++   +  EM   G+
Sbjct: 327 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 386

Query: 301 SPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLK 360
           +P+  + N   +    R +   A  +++KM +  +C P   TY +++ +F    + ET  
Sbjct: 387 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCEPDADTYTMVIKMFCEKKEMETAD 446

Query: 361 EVWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGL 420
           +VW  M+++G  P + +++ +I+GLCE++  ++AC    EMIE G  P  VTF  L + L
Sbjct: 447 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 506

Query: 421 IQSDMLRTWRRLKKKL 432
           I+ +     + L +K+
Sbjct: 507 IKEEREDVLKFLNEKM 507

BLAST of Cla011676 vs. Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 2.6e-45
Identity = 123/419 (29.36%), Postives = 209/419 (49.88%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTL--LRLTHHSKI-ALSLFHYAKSLPFNPLSTSSYNILIDI 60
           ++ SL    I  S  L+D+ L  +R +H + I  L  + YA ++     S+ S + ++ I
Sbjct: 58  LKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYI 117

Query: 61  LAKVRQFDAAWHLILQMDHK-----GTHTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNK 120
           L + R+FD  W L+++   K        T  +++ R+      RQ + +F   + L  + 
Sbjct: 118 LGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDF 177

Query: 121 VRIDGFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFL 180
                F  LL TLC+   +  A  V++  K +F  D + F IL+ GW      E  E F 
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSS---EEAEAFF 237

Query: 181 KDMVGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSF 240
           ++M G+G++P+VVTYN L++  C+          ++ I  A K+ D+MR+    PDV ++
Sbjct: 238 EEMKGKGLKPDVVTYNSLIDVYCK----------DREIEKAYKLIDKMREEEETPDVITY 297

Query: 241 SIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVR 300
           + V+       +P+ + + LK+MKE G  P VA Y + I+  C   RL DA+ L  EMV+
Sbjct: 298 TTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVK 357

Query: 301 SGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKE 360
            G+SP+  TYN FF+      D   +  LY +M  +  C+P+  +   L+ +F   +K +
Sbjct: 358 KGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGN-ECLPNTQSCMFLIKMFKRHEKVD 417

Query: 361 TLKEVWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEML 412
               +W DM  +G G        ++  LC+  +  EA +  +EM+E+G  P  V+F+ +
Sbjct: 418 MAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462


HSP 2 Score: 48.5 bits (114), Expect = 2.2e-04
Identity = 45/184 (24.46%), Postives = 79/184 (42.93%), Query Frame = 1

Query: 265 ATYTSVIKCLCSCGRLEDAENLFGEMVRSGISPSPATYNCFFKEYRGRKDGAGALRLYKK 324
           A + ++++ LC    + DA N++  + +    P   T+N       G K    A   +++
Sbjct: 181 ACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLS---GWKSSEEAEAFFEE 240

Query: 325 MREDCLCVPSLHTYNILLSLFLNLDKKETLKEVWNDMKERGRGPDLDSYTTMIHGLCEKQ 384
           M+   L  P + TYN L+ ++    + E   ++ + M+E    PD+ +YTT+I GL    
Sbjct: 241 MKGKGL-KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 300

Query: 385 RWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRL-----KKKLEEESITYG 444
           +  +A +   EM E G  P    +    R    +  L    +L     KK L   + TY 
Sbjct: 301 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 359


HSP 3 Score: 46.2 bits (108), Expect = 1.1e-03
Identity = 51/234 (21.79%), Postives = 95/234 (40.60%), Query Frame = 1

Query: 223 RGIEPDVTSFSIVLHVYSRAHKP----ELSLDKLKQMKELGISPTVATYTSVIKCLCSCG 282
           RG      S   +L++  R  K     EL ++  ++ + L    T+      +  LCS  
Sbjct: 102 RGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVR 161

Query: 283 RLEDAENLFGEMVRSGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTY 342
           +  ++   F  +V        A +N   +     K    A  +Y  ++      P L T+
Sbjct: 162 QTVESFWKFKRLVPDFFDT--ACFNALLRTLCQEKSMTDARNVYHSLKHQFQ--PDLQTF 221

Query: 343 NILLSLFLNLDKKETLKEVWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIE 402
           NILLS + + ++ E   E   +MK +G  PD+ +Y ++I   C+ +   +A +   +M E
Sbjct: 222 NILLSGWKSSEEAEAFFE---EMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMRE 281

Query: 403 RGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEE-----ESITYGSEFKNYHI 448
               P  +T+  +  GL         R + K+++E     +   Y +  +N+ I
Sbjct: 282 EEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCI 328

BLAST of Cla011676 vs. TrEMBL
Match: A0A0A0KZ73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G506840 PE=4 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 1.2e-243
Identity = 418/452 (92.48%), Postives = 429/452 (94.91%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQLHSISFS+HLLDQTLLRLTHHSKIALS F YA SLP NP+ST+SYNIL+DILAK
Sbjct: 55  MESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANSLPSNPISTTSYNILLDILAK 114

Query: 61  VRQFDAAWHLILQMDHKGTHTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRIDGFCY 120
           VRQFDAAWHLILQMDHKGT TFLLLIRRLIS+G TRQAIRAFDDIEGLTGNKV ID FCY
Sbjct: 115 VRQFDAAWHLILQMDHKGTDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDDFCY 174

Query: 121 LLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMVGRGI 180
           LLD LCKYGYVKVAVEVFNKRK EFGVD KI+TILIYGWCKIGRFEM ERFLKDMV RGI
Sbjct: 175 LLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGI 234

Query: 181 EPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVLHVYS 240
           EPNVVTYNVLLNGVCRRASLHPEGRFEKTIR+AEKVFDEMR+RGIEPDVTSFSIVLHVYS
Sbjct: 235 EPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYS 294

Query: 241 RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGISPSPA 300
           RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLED ENL  EMVRSGISPSP 
Sbjct: 295 RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPT 354

Query: 301 TYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKEVWND 360
           TYNCFFKEYRGRKDGAGALRLYKKMREDCLC PSLHTYNILL+LFLNLDKKETLKE+WND
Sbjct: 355 TYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKELWND 414

Query: 361 MKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM 420
           MKE G GPDLDSYTT+IHGLCEKQRW EACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM
Sbjct: 415 MKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM 474

Query: 421 LRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           LRTWRRLKKKLEEES TYGSE KNYHIKPYMR
Sbjct: 475 LRTWRRLKKKLEEESKTYGSELKNYHIKPYMR 506

BLAST of Cla011676 vs. TrEMBL
Match: M5VHD4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015078mg PE=4 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 1.6e-195
Identity = 332/456 (72.81%), Postives = 388/456 (85.09%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQLH I+ S  LL+ TLLRL H+SKIAL+ F+YAKSLP  PLST+S+N+LIDILAK
Sbjct: 25  MESSLQLHGITLSPQLLNHTLLRLIHNSKIALAFFNYAKSLPDPPLSTASFNLLIDILAK 84

Query: 61  VRQFDAAWHLILQMDHKG----THTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRID 120
           VRQ+D AW LIL+MD+        TFL+LIRRLIS+GLTRQA+RAF+D+E     K    
Sbjct: 85  VRQYDVAWQLILEMDNFNLTPTASTFLILIRRLISSGLTRQAVRAFEDMETFVQTKPSSQ 144

Query: 121 GFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMV 180
            FC LLDTL KYG+VKVA EVFNK+K  F  D K++T+L+YGWCKIGRF+M ERFL+DM+
Sbjct: 145 DFCCLLDTLSKYGHVKVAAEVFNKKKNGFVPDVKMYTVLVYGWCKIGRFDMAERFLRDMI 204

Query: 181 GRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVL 240
            RGIEPNVVTYNV LNG+CRRASLHPE RFE+TIRNAEKVF EM +RGIEPDVTSFSIVL
Sbjct: 205 ERGIEPNVVTYNVFLNGICRRASLHPEERFERTIRNAEKVFKEMWERGIEPDVTSFSIVL 264

Query: 241 HVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGIS 300
           HVYSRAHKPELSL+KLK M+E GI PT+ TYTSV+KCLCSCGRLEDAE L G+MV SG+S
Sbjct: 265 HVYSRAHKPELSLEKLKLMRERGICPTLETYTSVVKCLCSCGRLEDAEELLGKMVTSGVS 324

Query: 301 PSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKE 360
           P  ATYNCFFKEYRGRKD  GAL+LY+KM+E+ LCVPS+HTYNIL+ + L L++ E ++E
Sbjct: 325 PCAATYNCFFKEYRGRKDSEGALKLYRKMKEEGLCVPSMHTYNILVGMLLELNRMEIVRE 384

Query: 361 VWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLI 420
           +WNDMKE G GPDLDSYT +IHGLC KQ+WREACQ FVEMIE+G LPQK+TFE LY+GLI
Sbjct: 385 IWNDMKESGVGPDLDSYTMLIHGLCGKQKWREACQLFVEMIEKGLLPQKITFETLYKGLI 444

Query: 421 QSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           QSDMLRTWRRLKKKL+EESI++GSEF+NYH+KPY R
Sbjct: 445 QSDMLRTWRRLKKKLDEESISFGSEFQNYHLKPYRR 480

BLAST of Cla011676 vs. TrEMBL
Match: V4T738_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000792mg PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 1.4e-191
Identity = 328/467 (70.24%), Postives = 387/467 (82.87%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNP------LSTSSYNIL 60
           MESSLQLH I+ S HLL+QTLLRL H SK+AL+ FHY++SLP N        S SSYN++
Sbjct: 74  MESSLQLHGITLSPHLLNQTLLRLQHSSKVALAFFHYSQSLPSNSNNPRPSTSASSYNLI 133

Query: 61  IDILAKVRQFDAAWHLILQMDHKG----THTFLLLIRRLISAGLTRQAIRAFDDIEGLT- 120
           IDIL+KVRQFD  W LI+QMD       +  FL+LIRRLI+AGLTRQAIRAFDD++    
Sbjct: 134 IDILSKVRQFDVVWQLIVQMDQNNITPISSAFLILIRRLIAAGLTRQAIRAFDDMKCFVQ 193

Query: 121 ----GNKVRIDGFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRF 180
                N   ++ FC+LLDTLCKYGYVKVAVEVFN+ K E   + K++T LIYGWCKI R 
Sbjct: 194 TENQNNNNNVNFFCFLLDTLCKYGYVKVAVEVFNRNKHEIIPNVKMYTSLIYGWCKINRI 253

Query: 181 EMGERFLKDMVGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGI 240
           +M ERFL +M+ RG+EPNVVTYNVLLNGVCRRASLHP  RFEKTIRNAEKVFDEMR RGI
Sbjct: 254 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGI 313

Query: 241 EPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAEN 300
           EPDVTSFSIVLHVYSRAH+P+LSLDKL  MKE GI PTVATY+SV+KCLCSCGR+EDAE 
Sbjct: 314 EPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEE 373

Query: 301 LFGEMVRSGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLF 360
           L GEMVR+G+ PS  TYNCFFKEYRGRKD  GA++LY++M+ED LCVP++H+YNIL+ +F
Sbjct: 374 LLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMF 433

Query: 361 LNLDKKETLKEVWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQK 420
           + L++ + ++E+WND+K  G GPDLDSYT +IHGLCEKQ+W+EACQ+FVEMIE+G LPQK
Sbjct: 434 MALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 493

Query: 421 VTFEMLYRGLIQSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           VTFE LYRGLIQSDMLRTWRRLKKKL+EESIT+GSEF+NYH KPY R
Sbjct: 494 VTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 540

BLAST of Cla011676 vs. TrEMBL
Match: B9RFN9_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1436140 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 1.0e-189
Identity = 316/456 (69.30%), Postives = 385/456 (84.43%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQLH I+ S+ LL QTLLRL H+SKIALS FHY+ SLP + ++T++YN++IDIL+K
Sbjct: 56  MESSLQLHGITLSSSLLHQTLLRLRHNSKIALSFFHYSLSLPSSSVNTTTYNLIIDILSK 115

Query: 61  VRQFDAAWHLILQMDHKG----THTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRID 120
           VRQFD +W LI+QMD       +HTFL+LIRRLISAG TRQAIRAFDD+E      V   
Sbjct: 116 VRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAFDDMESFIAETVNQT 175

Query: 121 GFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMV 180
            FC+LLDTLCKYGY+KVAVEVFNKRK  F  + +I+T+LIYGWCKIGR +M ERF+++M 
Sbjct: 176 HFCFLLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMD 235

Query: 181 GRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVL 240
             GIE NVVTYNVLL+G+CRRA L PEGRFE+TI  A+KVFDEMRQ+GIEPDVTSFSI+L
Sbjct: 236 EMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILL 295

Query: 241 HVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGIS 300
           HVYSRAHKP+L++DKLK M+E+GI PTVATYTSV+KCLCSCGR++DAE L  +MVR+G+S
Sbjct: 296 HVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVS 355

Query: 301 PSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKE 360
           P+ ATYNCFFKEYRGRKD   AL+LY+K+R++ LC PS+HTYNILL +F+ L++   + E
Sbjct: 356 PNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNE 415

Query: 361 VWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLI 420
           +WND++  G GPDLDSYT ++HGLCEKQ+W++ACQFFVEMIE+G LPQK TFEMLY GLI
Sbjct: 416 IWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLI 475

Query: 421 QSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           QS+MLRTWRRLKKKL+EESI +GSEF NYH+KPY R
Sbjct: 476 QSNMLRTWRRLKKKLDEESIAFGSEFSNYHLKPYRR 511

BLAST of Cla011676 vs. TrEMBL
Match: W9S645_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022268 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 2.2e-189
Identity = 320/457 (70.02%), Postives = 382/457 (83.59%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQLH +S S+HLL QTLLRL H SKIAL+ F Y+KSLP  PL+T+SYNILID+LAK
Sbjct: 84  MESSLQLHGLSLSSHLLHQTLLRLKHSSKIALAFFQYSKSLPLPPLTTTSYNILIDVLAK 143

Query: 61  VRQFDAAWHLILQMDHK-----GTHTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRI 120
           VRQFD  W LI++MD        + TFL+LIRRLI+AGLTRQA+RAFDD+E   G +   
Sbjct: 144 VRQFDVVWQLIVEMDRSTGVKPDSDTFLILIRRLIAAGLTRQAVRAFDDVEAFVGTRPTS 203

Query: 121 DGFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDM 180
           + F +LLDTLCKYGYV+ AVEVFNKR+  F VD KI+T L+ GWCKIGR E  ++FL +M
Sbjct: 204 EDFLFLLDTLCKYGYVRQAVEVFNKRRNGFVVDVKIYTALMCGWCKIGRVETAKKFLNEM 263

Query: 181 VGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIV 240
           V RGIEPNVVTYNVLLNGVCR+ASLHPE RFEKTIRNAEKVFDEMR+RGIEPD T+FSIV
Sbjct: 264 VERGIEPNVVTYNVLLNGVCRKASLHPEERFEKTIRNAEKVFDEMRERGIEPDATTFSIV 323

Query: 241 LHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGI 300
           LHVYSRAHKP++S++KL++M+E G+SPTVATYTSV+KCLCSCGRLEDAE L  +MVR GI
Sbjct: 324 LHVYSRAHKPDMSVEKLREMREKGVSPTVATYTSVVKCLCSCGRLEDAEELLDQMVRDGI 383

Query: 301 SPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLK 360
           SP   TYNCFFKEYRGRKD  GAL+LY+KM+++  C+  +HTY+ILL +FL  ++ E  +
Sbjct: 384 SPCVETYNCFFKEYRGRKDVDGALKLYRKMKDEGSCMLGMHTYHILLGMFLKQNRLEIAR 443

Query: 361 EVWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGL 420
           E+W+DMKE G G DLDSYT M+HGLCEK++WREACQFFVEMIE+GFLPQ VTFE LYRGL
Sbjct: 444 EIWDDMKESGSGLDLDSYTMMVHGLCEKEKWREACQFFVEMIEKGFLPQTVTFETLYRGL 503

Query: 421 IQSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           IQSD LRTWRRLKK+L++ESIT+G EF++Y + PY R
Sbjct: 504 IQSDKLRTWRRLKKRLDQESITFGLEFQSYELNPYKR 540

BLAST of Cla011676 vs. NCBI nr
Match: gi|659082952|ref|XP_008442112.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucumis melo])

HSP 1 Score: 854.0 bits (2205), Expect = 1.2e-244
Identity = 418/452 (92.48%), Postives = 431/452 (95.35%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQLHSISFS+HLLDQTLLRLTHHSKIALS F YA +LP NP+ST+SYNIL+DILAK
Sbjct: 55  MESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANTLPSNPISTTSYNILLDILAK 114

Query: 61  VRQFDAAWHLILQMDHKGTHTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRIDGFCY 120
           VRQFDAAWHLILQMDHKGT TFLLLIRRLIS+G TRQAIRAFDDIEGLTGNKV ID FCY
Sbjct: 115 VRQFDAAWHLILQMDHKGTDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDDFCY 174

Query: 121 LLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMVGRGI 180
           LLD LCKYGYVKVAVEVFNKRK EFGVD KI+T+LIYGWCKIGRFEM ERFLKDMV RGI
Sbjct: 175 LLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTVLIYGWCKIGRFEMAERFLKDMVERGI 234

Query: 181 EPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVLHVYS 240
           EPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMR+RGIEPDVTSFSIVLHVYS
Sbjct: 235 EPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRKRGIEPDVTSFSIVLHVYS 294

Query: 241 RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGISPSPA 300
           RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENL GEMVRSGISPSP 
Sbjct: 295 RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLVGEMVRSGISPSPT 354

Query: 301 TYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKEVWND 360
           TYNCFFKEYRGRKDGAGALRLYK+MREDCLC PSLHTYNILL+LFLNLDKK+TLKE+WND
Sbjct: 355 TYNCFFKEYRGRKDGAGALRLYKRMREDCLCAPSLHTYNILLALFLNLDKKQTLKELWND 414

Query: 361 MKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM 420
           MK  G GPDLDSYTTMIHGLCEKQRW EACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM
Sbjct: 415 MKASGVGPDLDSYTTMIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM 474

Query: 421 LRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           LRTWRRLKKKLEEES TYGSEFKNYHIKPYMR
Sbjct: 475 LRTWRRLKKKLEEESKTYGSEFKNYHIKPYMR 506

BLAST of Cla011676 vs. NCBI nr
Match: gi|449457341|ref|XP_004146407.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial [Cucumis sativus])

HSP 1 Score: 850.1 bits (2195), Expect = 1.7e-243
Identity = 418/452 (92.48%), Postives = 429/452 (94.91%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQLHSISFS+HLLDQTLLRLTHHSKIALS F YA SLP NP+ST+SYNIL+DILAK
Sbjct: 55  MESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANSLPSNPISTTSYNILLDILAK 114

Query: 61  VRQFDAAWHLILQMDHKGTHTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRIDGFCY 120
           VRQFDAAWHLILQMDHKGT TFLLLIRRLIS+G TRQAIRAFDDIEGLTGNKV ID FCY
Sbjct: 115 VRQFDAAWHLILQMDHKGTDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDDFCY 174

Query: 121 LLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMVGRGI 180
           LLD LCKYGYVKVAVEVFNKRK EFGVD KI+TILIYGWCKIGRFEM ERFLKDMV RGI
Sbjct: 175 LLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGI 234

Query: 181 EPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVLHVYS 240
           EPNVVTYNVLLNGVCRRASLHPEGRFEKTIR+AEKVFDEMR+RGIEPDVTSFSIVLHVYS
Sbjct: 235 EPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYS 294

Query: 241 RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGISPSPA 300
           RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLED ENL  EMVRSGISPSP 
Sbjct: 295 RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPT 354

Query: 301 TYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKEVWND 360
           TYNCFFKEYRGRKDGAGALRLYKKMREDCLC PSLHTYNILL+LFLNLDKKETLKE+WND
Sbjct: 355 TYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKELWND 414

Query: 361 MKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM 420
           MKE G GPDLDSYTT+IHGLCEKQRW EACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM
Sbjct: 415 MKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM 474

Query: 421 LRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           LRTWRRLKKKLEEES TYGSE KNYHIKPYMR
Sbjct: 475 LRTWRRLKKKLEEESKTYGSELKNYHIKPYMR 506

BLAST of Cla011676 vs. NCBI nr
Match: gi|694326786|ref|XP_009354296.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 701.8 bits (1810), Expect = 7.7e-199
Identity = 338/456 (74.12%), Postives = 392/456 (85.96%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQLH I+ S+ L+  TLLRLT++SKIAL+ F YAKSLP  PL+T+S+N+LIDILAK
Sbjct: 70  MESSLQLHGITLSSQLVHHTLLRLTNNSKIALAFFQYAKSLPNPPLTTASFNLLIDILAK 129

Query: 61  VRQFDAAWHLILQMDHKG----THTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRID 120
           VRQ+D AW LI++MD+      T TFL LIRRLIS+GLTRQA+RAFDDIE     K    
Sbjct: 130 VRQYDVAWQLIVEMDNFNLTPTTATFLTLIRRLISSGLTRQAVRAFDDIETFVQTKPSCQ 189

Query: 121 GFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMV 180
            FC+LLDTLCKYG+VKVA EVFNKRK EF  D K++T+LIYGWCKIGRF+M ERFL DM+
Sbjct: 190 DFCFLLDTLCKYGHVKVATEVFNKRKHEFVPDVKMYTVLIYGWCKIGRFDMAERFLSDMI 249

Query: 181 GRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVL 240
            RGIEPNVVTYNV LNG+CRRASLHP+ RFEKTIRNAEKVF+EMR+RGIEPDVTSFSIVL
Sbjct: 250 ERGIEPNVVTYNVFLNGICRRASLHPQERFEKTIRNAEKVFEEMRKRGIEPDVTSFSIVL 309

Query: 241 HVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGIS 300
           HVYSRAHKPELSLDKLK M+E GI PTV TYTSV+KCLCSCGRLEDAE L G+MVRSG+S
Sbjct: 310 HVYSRAHKPELSLDKLKLMRERGIFPTVETYTSVVKCLCSCGRLEDAEELLGDMVRSGVS 369

Query: 301 PSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKE 360
           P  ATYNCFFKEYRGRK+G  AL+LY+KM+ED LC+PS+HTYNIL+ + L L++ E + E
Sbjct: 370 PCAATYNCFFKEYRGRKNGECALKLYRKMKEDGLCMPSMHTYNILVGMLLELNRMEIVNE 429

Query: 361 VWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLI 420
           +WNDMKE G GPDLDSYT +IHGLC KQ+WREACQFFVEMIE+G LPQK+TFE LY+GLI
Sbjct: 430 IWNDMKEGGVGPDLDSYTMLIHGLCAKQKWREACQFFVEMIEKGLLPQKITFETLYKGLI 489

Query: 421 QSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           QSDMLRTWRRLKKKL+EESI++GSEF+ YH+KP+ R
Sbjct: 490 QSDMLRTWRRLKKKLDEESISFGSEFQKYHLKPFRR 525

BLAST of Cla011676 vs. NCBI nr
Match: gi|658015096|ref|XP_008342880.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Malus domestica])

HSP 1 Score: 701.4 bits (1809), Expect = 1.0e-198
Identity = 338/456 (74.12%), Postives = 391/456 (85.75%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSLQLH I+ S+ L+  TLLRLT++SKIAL+ FHYAKSLP  PL+T+S+N+LIDILAK
Sbjct: 70  MESSLQLHGITLSSQLVHHTLLRLTNNSKIALAFFHYAKSLPNPPLTTASFNLLIDILAK 129

Query: 61  VRQFDAAWHLILQMDHKG----THTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRID 120
           VRQ+D AW LI++MD+        TFL LIRRLIS+GLTRQAIRAFDDIE     K    
Sbjct: 130 VRQYDVAWQLIVEMDNFNLTPTATTFLTLIRRLISSGLTRQAIRAFDDIETFVQTKPSSQ 189

Query: 121 GFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMV 180
            FC+LLDTLCKYG+VKVA EVFNK+K EF  D K++T+LIYGWCKIGRF+M ERFL+DM+
Sbjct: 190 DFCFLLDTLCKYGHVKVATEVFNKKKHEFVPDVKMYTVLIYGWCKIGRFDMAERFLRDMI 249

Query: 181 GRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVL 240
              IEPNVVTYNV LNG+CRRASLHP+ RFEKTIRNAEKVF+EM +RGIEPDVTSFSIVL
Sbjct: 250 EHSIEPNVVTYNVFLNGICRRASLHPQERFEKTIRNAEKVFEEMWKRGIEPDVTSFSIVL 309

Query: 241 HVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGIS 300
           HVYSRAHKPELSLDKLK M+E GI PTV TYTSV+KCLCSCGRLEDAE L GEMVRSG+S
Sbjct: 310 HVYSRAHKPELSLDKLKLMRERGIFPTVETYTSVVKCLCSCGRLEDAEELLGEMVRSGVS 369

Query: 301 PSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKE 360
           P  ATYNCFFKEYRGRK+G GAL+LY+KM+ED  CVPS+HTYNIL+ + L L++ E +KE
Sbjct: 370 PCAATYNCFFKEYRGRKNGEGALKLYRKMKEDGXCVPSMHTYNILVGMLLELNRMEIVKE 429

Query: 361 VWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLI 420
           +WNDMKE G GPDLDSYT +IHGLC KQ+WREACQFFVEMIE+G LPQK+TFE LY+GLI
Sbjct: 430 IWNDMKESGVGPDLDSYTMLIHGLCAKQKWREACQFFVEMIEKGLLPQKITFETLYKGLI 489

Query: 421 QSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           QSDMLRTWRRLKKKL+EESI++GSEF+ YH+KP+ R
Sbjct: 490 QSDMLRTWRRLKKKLDEESISFGSEFQKYHLKPFRR 525

BLAST of Cla011676 vs. NCBI nr
Match: gi|1009146967|ref|XP_015891158.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 699.5 bits (1804), Expect = 3.8e-198
Identity = 333/456 (73.03%), Postives = 394/456 (86.40%), Query Frame = 1

Query: 1   MESSLQLHSISFSTHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 60
           MESSL+LH +S STHLL QTLLR+ H SKIALS FHY+KSLP  PL+ +SYN+LIDILAK
Sbjct: 63  MESSLELHGVSLSTHLLHQTLLRIRHSSKIALSFFHYSKSLPTPPLTATSYNLLIDILAK 122

Query: 61  VRQFDAAWHLILQMDHKGT----HTFLLLIRRLISAGLTRQAIRAFDDIEGLTGNKVRID 120
           VRQFD AW LI++MD          FL+LIRRLISAGLTRQA+RAF+DIE   G K   +
Sbjct: 123 VRQFDVAWQLIVEMDQNKLCPPPTPFLILIRRLISAGLTRQAVRAFNDIESFIGTKPTTE 182

Query: 121 GFCYLLDTLCKYGYVKVAVEVFNKRKGEFGVDAKIFTILIYGWCKIGRFEMGERFLKDMV 180
            F +LLDTLCKYGYVKVA EVFN+RK  F  D K++T+++YGWCKIGR +M ERFL+DM+
Sbjct: 183 DFRFLLDTLCKYGYVKVAAEVFNERKHGFVPDVKMYTVMVYGWCKIGRVDMAERFLRDMI 242

Query: 181 GRGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVL 240
           GRGIEPNVVTYNVLLNG+CRRASLHPE RFE+TIR+A+KVFDEM +RGIEPDVTS+SIVL
Sbjct: 243 GRGIEPNVVTYNVLLNGICRRASLHPEERFERTIRSADKVFDEMWERGIEPDVTSYSIVL 302

Query: 241 HVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLFGEMVRSGIS 300
           HVYSRAHKP+LSLDKLK M+E GISPTVATYTSV+KCL SCGRL+DAE L  EMV +G+S
Sbjct: 303 HVYSRAHKPQLSLDKLKLMRERGISPTVATYTSVVKCLSSCGRLDDAEELLSEMVSNGVS 362

Query: 301 PSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLCVPSLHTYNILLSLFLNLDKKETLKE 360
           P  ATYNCFFKEYRGRKD  GAL+LYKKM++D LC+P++HTYNIL+ +FL L++ E +KE
Sbjct: 363 PCAATYNCFFKEYRGRKDTDGALKLYKKMKQDGLCMPNMHTYNILVGMFLTLNRMEIVKE 422

Query: 361 VWNDMKERGRGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLI 420
           +WNDMK+ G GPDLDSYT +IHGLCEK++WR+AC+FFVEMIE+GFLPQKVTFE LYRGLI
Sbjct: 423 LWNDMKDNGTGPDLDSYTVLIHGLCEKKKWRKACKFFVEMIEKGFLPQKVTFETLYRGLI 482

Query: 421 QSDMLRTWRRLKKKLEEESITYGSEFKNYHIKPYMR 453
           QS+ LRTWRRLKKKL++ESIT+GSEF++YH+KPY R
Sbjct: 483 QSNKLRTWRRLKKKLDQESITFGSEFQSYHLKPYRR 518

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP150_ARATH8.8e-17966.89Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidop... [more]
PPR54_ARATH1.6e-5029.95Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop... [more]
PP125_ARATH2.5e-4830.24Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
PP129_ARATH3.0e-4626.38Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
PPR5_ARATH2.6e-4529.36Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A0A0KZ73_CUCSA1.2e-24392.48Uncharacterized protein OS=Cucumis sativus GN=Csa_4G506840 PE=4 SV=1[more]
M5VHD4_PRUPE1.6e-19572.81Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015078mg PE=4 SV=1[more]
V4T738_9ROSI1.4e-19170.24Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000792mg PE=4 SV=1[more]
B9RFN9_RICCO1.0e-18969.30Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
W9S645_9ROSA2.2e-18970.02Uncharacterized protein OS=Morus notabilis GN=L484_022268 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659082952|ref|XP_008442112.1|1.2e-24492.48PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-... [more]
gi|449457341|ref|XP_004146407.1|1.7e-24392.48PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial ... [more]
gi|694326786|ref|XP_009354296.1|7.7e-19974.12PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-... [more]
gi|658015096|ref|XP_008342880.1|1.0e-19874.12PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-... [more]
gi|1009146967|ref|XP_015891158.1|3.8e-19873.03PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU73980watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011676Cla011676.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU73980WMU73980transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 212..225
score: 1.2coord: 231..260
score: 0.088coord: 50..78
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 333..381
score: 1.3E-11coord: 150..196
score: 5.9E-13coord: 262..308
score: 2.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 336..369
score: 9.2E-4coord: 213..229
score: 0.003coord: 231..264
score: 5.5E-4coord: 372..403
score: 1.7E-9coord: 50..78
score: 1.2E-4coord: 266..298
score: 1.7E-10coord: 151..184
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 47..81
score: 9.197coord: 369..403
score: 12.978coord: 228..262
score: 10.073coord: 298..332
score: 7.037coord: 148..182
score: 11.488coord: 263..297
score: 13.625coord: 334..368
score: 9.251coord: 183..227
score: 8.944coord: 114..144
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..445
score: 2.5E
NoneNo IPR availablePANTHERPTHR24015:SF516SUBFAMILY NOT NAMEDcoord: 1..445
score: 2.5E