Cla011021 (gene) Watermelon (97103) v1

Overview
NameCla011021
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 17141135 .. 17144601 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCTGTATCTACTTTTTTTCGACGCATGGTCTCAACGCATAGGCTCGACGCATGGGTTTCCACTTGTTCTCGCAGCAGCTTCGTCTCTTAGTGCTTGGGTTATTTGTGTTTCTTTTCTTCTTAACCCTGCGTTAGGAACAGAAAAGCTTATAGTTTTTCAGGTATTTTCTTTTGTAAATAGCGCCAATGCATGGTGATACATTTTACATCATTCATCTACCAAAATCATACGTTTAGCTCTAAAGTTCCTCTAATTAAATCAAATAGTGACTATAATAACTTGTATTTCTACAAGTTATCAAGAGTATTAAAAGATGCAAGGGAACTGCCTATTACGAAGCTTCTTGAGCATATTCAGGGTTGGTTACAAAATTGGTCTTATGTCTGACGTACACATGTCATGGCATGCACAAATCTTGTAATCGACTATGCAATGACTATCCTAAAAGAGGCTGAATCGGTGTCCAGAATGTATCGTGTATCTCCAGTGGACATGTATGTGCTAAATGTTGACGATGGGCTGGTTAATCTCCGTTCACGAACATGTACGTGCATGGAGTTCAATTGCATGGAGATTCCATGCTCACATGCAGTAGCTACGGCAGCCATGCAAAACATCAACGTTCAAACGTTGTGCTCAAAGTGGTTCACAGTAGAGTGTGTGCTTGCCACTTATGCCAAACCGATTGGCCATCGACAAGAGTGGAGACAATGACCTGATTTCGATGACTTTGAAATCTTACCACTGCGAAAGGTGCCAAGCGTAGGTCAACGGTAGACTGTTAGAACACCATCTACTAGTGAGGAGCCACGACAAGTACATAAGTGTACGCAATGCGGTCACAGAGTACACAATAGAAAAACATGCCAGCAGCCACTGATAACACCTGCCACGGGGACGCATGGGATGCATGAAACGTGAATATAAGACCCTTGGACCCATTTGATGCATGGACATCATTGAATGCATGAAACGTGAATAGAAACCCCTTCGACGCATTGGACGCATGGGACGCATGGGACGCATAAAATGTGAATAGAAGCCCCTTGGACGCATTGGACGCATGGGACGCATGAGATGCATGAAACGTGAATAGAACCCGTTGGAAGCATTGGACGCATGAGATGCATGAAACGTGAATAGAAGCCTGTTGGATGCATTGGACGCATTGGACATCTTTTTTATAGATAATTTTGGGATGTAATTTTAATTGTAATTACTTTATATTAAGAGATCGTTAAGTGTATATGTAATTGTAATTGTAATTACTTTACTTTGTAATTGTTTACTTAGGCGATCGTTTAGTGTATATGTAATTGTAATTGTAATTACTTTACATTGTAATTGTTTACTTAGGCGATCCTTTACTTTACTTAGGTGATCGTTTAGTGTAAATTGAACGATCGCTTAGTATTCATTATCGGTTGTGTATTGTATATTTAAGCGATTACTTAGTATCTATTAAGCGATCATTTAGTGTAAATTGAACGATCGCTTAGTATTTCATAAACAATCGCTTAGTCAATCTATTGTAATACATGAAAAGGTTTAATTTAAGTATAATAAGAATAGATGTACACGTATACTTGCATTTGATAAATTAATTGGATTATATTAAGTATATACGAAAATTTACAAGAAACAACAATTGTATAAACGAATACTAATATCATTACCATAAAAATTTGTCTACCCATAATTCAGCTACATACTGTTTCCTAAATACAGGCATATTGTTCAAATTTAAACTATCTCTATTAGTATTTGTTGCAAGGTATTCTAAAAATTTACAAGAAAAAATCCCACAGTCGAGGGATTTGCCCCATTGAAGCGTTGTCCTGGATCGCTTCACTTTCCATGGCCAGTACTTGAAATTTGGAAGGTTCTTGTCGAATCCATCAACGATCAAAATGGATAGTATGGCCCCGCTGAGCAACTGGAGTCTTGGGTTCACAATGTCTGCACGTATGTGGTCTGGCATGGAGTCAAAGATGAATATCGTGGACTCCCGAAGGTCGATTGCAGCCATGAGCCAATGCTCATTTATGTTGATTGGCCCAAACACGTAATCCACCTCTGACCATGCAGGCTTGTAGTCTTCGTTCAGACCGTGTGCGAACTCCAGGAACATCAAATGCATTGCCCAAAAACCAGCGTGTGCAACCTTGTTGGTCCAAGGCTTAACTGTCCCGTCGTGCATGACCACACCATCAGGTTGTATATTGCATGAGATTCCTTCAATATTCGTGAGGGAATCCTATAGGAAATCAATTGTTAGATAAAACAACAATAATACTCGGTCAAATGCAGTGTTCACCACCGTAAACCGATGTGAACACAAATCGGGGCGGGAGTGAAGCTTCCGGTGAACGTGGAGTACTAGTATGTCCATAATCTACAGAAAACAACGTAAGAGTTTAGTAATAGCAATTGAATTTCTAAATGATTGTTTATGAATTCATAAGCGATTGCTTACTAAACATAAACGATCGCTTACTAAATTAAACGATCGCTTAAAGTTAACTAAACGATCACATAGTTTTGTCTAAACGATCGCTTATATAATCCTAAACGATCTCTTCATAATAAGCAATCGCATAGGATTATATAAGCGATCACGTAGTCGGAACTATGCAATCGCTTAATAATATCTAAGCGATAAGTGGAAGTTTAAAGAAAAACTTACGTCCCCAATCACCCATGTATTCTTCTCAAGTGTGTGGAAGAATTCCTTGGTCCTTGAGGCGTATGTGACTGTCTTAACCTCGTCCTTCGTCTTCGGAGTGCTCCTCCACTTCTTATATGCAGACCACAGCACATCCGGAATTGGGAACAAGGGGTCATACGCTCGAACCGATCTGATGGGGAAGTTGGGGACAGGGACTACAGGTTGGGGAGGGGGTTGGAGTTGGGCAAGTAGAGGTTGGGAAGGTTGAGAAGGTTGGGGTTGGGAGGGTGGAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAATTAGTTAAGGAGATTTGGAAGAAGATGGTTGGGAAGTTTAGGGTTTGGAGGGTGAAGATTGGGAAGGTTTGGAAGGTTGAGAGGTTTGGGGAATTGGTTGAGGAGATTTGGAAGGAGGAGGTTAAGAAGTTTGGGGTTTGGAGGGTGGAGGTTGGGAAGGTTTGGAAGGTTGTGAGGGGGAACAGGTTTGGAGGATGTTGGCTCCCTCTTCTGCCTCTTCACATCCTCTAG

mRNA sequence

ATGCGTCTGTATCTACTTTTTTTCGACGCATGGTCTCAACGCATAGGCTCGACGCATGGGTTTCCACTTGTTCTCGCAGCAGCTTCGTCTCTTAGTGCTTGGGTTATTTGTGTTTCTTTTCTTCTTAACCCTGCGTTAGGAACAGAAAAGCTTATAGTTTTTCAGGGACTACAGGTTGGGGAGGGGGTTGGAGTTGGGCAAGTAGAGGTTGGGAAGGTTGAGAAGGTTGGGGTTGGGAGGGTGGAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAATTAGTTAAGGAGATTTGGAAGAAGATGGTTGGGAAGTTTAGGGTTTGGAGGGTGAAGATTGGGAAGGTTTGGAAGGTTGAGAGGTTTGGGGAATTGGTTGAGGAGATTTGGAAGGAGGAGGTTAAGAAGTTTGGGGTTTGGAGGGTGGAGGTTGGGAAGGTTTGGAAGGTTGTGAGGGGGAACAGGTTTGGAGGATGTTGGCTCCCTCTTCTGCCTCTTCACATCCTCTAG

Coding sequence (CDS)

ATGCGTCTGTATCTACTTTTTTTCGACGCATGGTCTCAACGCATAGGCTCGACGCATGGGTTTCCACTTGTTCTCGCAGCAGCTTCGTCTCTTAGTGCTTGGGTTATTTGTGTTTCTTTTCTTCTTAACCCTGCGTTAGGAACAGAAAAGCTTATAGTTTTTCAGGGACTACAGGTTGGGGAGGGGGTTGGAGTTGGGCAAGTAGAGGTTGGGAAGGTTGAGAAGGTTGGGGTTGGGAGGGTGGAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAGTTGGTTGTGGAGGTTGGGAATGTGGAGGTTGAGAAGGTTTGGAAGGTTGGGAGGTTTGGGGAATTAGTTAAGGAGATTTGGAAGAAGATGGTTGGGAAGTTTAGGGTTTGGAGGGTGAAGATTGGGAAGGTTTGGAAGGTTGAGAGGTTTGGGGAATTGGTTGAGGAGATTTGGAAGGAGGAGGTTAAGAAGTTTGGGGTTTGGAGGGTGGAGGTTGGGAAGGTTTGGAAGGTTGTGAGGGGGAACAGGTTTGGAGGATGTTGGCTCCCTCTTCTGCCTCTTCACATCCTCTAG

Protein sequence

MRLYLLFFDAWSQRIGSTHGFPLVLAAASSLSAWVICVSFLLNPALGTEKLIVFQGLQVGEGVGVGQVEVGKVEKVGVGRVEVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVKEIWKKMVGKFRVWRVKIGKVWKVERFGELVEEIWKEEVKKFGVWRVEVGKVWKVVRGNRFGGCWLPLLPLHIL
Homology
[Close]
BLAST of Cla011021 vs. TrEMBL
Match: W2T229_NECAM (Uncharacterized protein OS=Necator americanus GN=NECAME_00667 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-07
Identity = 58/127 (45.67%), Postives = 66/127 (51.97%), Query Frame = 1 

Query: 63  VGVGQVEVGKVE-KVGVGRVEVG----RFGELVVEVGNVEVEKVWKVGRFGELVVEVGNV 122
           VG   VEVG V  +VG   VEVG      G +VVEVG V VE    V   G +VVEVG V
Sbjct: 3   VGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTV 62

Query: 123 EVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVKE- 182
            VE    V   G +VVEVG V VE    V   G +VVEVG V V     V   G +V E 
Sbjct: 63  VVEVGTVVVEVGTVVVEVGTVVVEVAAVVVEVGTVVVEVGTVVVLDGAVVVDVGTVVVEV 122

Query: 183 IWKKMVG 184
           +  K+VG
Sbjct: 123 VLVKLVG 129

[Close]
BLAST of Cla011021 vs. TrEMBL
Match: A0A151IWR3_9HYME (Putative PPE family protein PPE16 OS=Trachymyrmex cornetzi GN=ALC57_15583 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-06
Identity = 70/182 (38.46%), Postives = 93/182 (51.10%), Query Frame = 1 

Query: 56  GLQVGEGVGVGQVEVGKVE--KVGVGRVEVGRFGELVVEVGNVEVEKVWKVGRFGELVVE 115
           G++V + VGVG+++VG V+  ++GVG V VG  G  VV VG + VE V  V   G  VV 
Sbjct: 71  GVEVVDVVGVGELDVGVVDVGELGVGVVGVGELGVGVVGVGELGVEVV-GVEELGVEVVG 130

Query: 116 VGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVE---------KV 175
           V +V V  V  VG  G  VV VG + V  V  VG  G  VV VG V+VE         +V
Sbjct: 131 VVDVGVVGVVGVGELGVGVVGVGELGVGVV-GVGELGVEVVGVGVVDVEVLGVGVVDVEV 190

Query: 176 WKVGRFGELVKEIWKKMVGKFRVWRVKIGKVWKVERFGELVEEIWKEEVKKFGVWRVEVG 227
             V      V+E+  ++VG   V  + +G V  VE F  +V       V + GV  V VG
Sbjct: 191 LDVSIGVVDVEELGVEVVGDVGVGELGVGVV-VVEEFDVVV------GVGELGVGVVGVG 243

[Close]
BLAST of Cla011021 vs. TrEMBL
Match: A0A151IWR3_9HYME (Putative PPE family protein PPE16 OS=Trachymyrmex cornetzi GN=ALC57_15583 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.5e-04
Identity = 68/164 (41.46%), Postives = 84/164 (51.22%), Query Frame = 1 

Query: 63  VGVGQVEVGKVEKVGVGRVEVGRFGELVVEVGNVEVEKVWKVGRFGEL---VVEVGNVEV 122
           +GVG V VG+   +GVG V+VG  G  VV VG + VE V  VG  GEL   VV+VG + V
Sbjct: 40  LGVGVVGVGE---LGVGVVDVGELGVGVVGVGELGVEVVDVVG-VGELDVGVVDVGELGV 99

Query: 123 EKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVKEIWK 182
             V  VG  G  VV VG + VE V  V   G  VV V +V V  V  VG  G     +  
Sbjct: 100 GVV-GVGELGVGVVGVGELGVEVV-GVEELGVEVVGVVDVGVVGVVGVGELG-----VGV 159

Query: 183 KMVGKFRVWRVKIGKVWKVERFGELVEEIWKEEVKKFGVWRVEV 224
             VG+  V  V +G++  VE  G  V ++   EV   GV  VEV
Sbjct: 160 VGVGELGVGVVGVGEL-GVEVVGVGVVDV---EVLGVGVVDVEV 188


HSP 2 Score: 50.4 bits (119), Expect = 3.5e-03
Identity = 70/182 (38.46%), Postives = 88/182 (48.35%), Query Frame = 1 

Query: 57  LQVGEGV-GVGQ--VEVGKVEKVGVGRVEVGRFGELVVEVG------------NVEVEKV 116
           L++G GV GV +  VEV  V+++GVG V VG  G  VV+VG             VEV  V
Sbjct: 18  LELGVGVVGVEELGVEVVGVKELGVGVVGVGELGVGVVDVGELGVGVVGVGELGVEVVDV 77

Query: 117 WKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEV 176
             VG     VV+VG + V  V  VG  G  VV VG + VE V  V   G  VV V +V V
Sbjct: 78  VGVGELDVGVVDVGELGVGVV-GVGELGVGVVGVGELGVEVV-GVEELGVEVVGVVDVGV 137

Query: 177 EKVWKVGRFGELVKEIWKKMVGKFRVWRVKIGKVWKVERFGELVEEIWKEEVKKFGVWRV 224
             V  VG  G     +    VG+  V  V +G++  VE  G  V ++   EV   GV  V
Sbjct: 138 VGVVGVGELG-----VGVVGVGELGVGVVGVGEL-GVEVVGVGVVDV---EVLGVGVVDV 188


HSP 3 Score: 46.6 bits (109), Expect = 5.1e-02
Identity = 56/151 (37.09%), Postives = 72/151 (47.68%), Query Frame = 1 

Query: 25  LAAASSLSAWVICVSFLLNPALGTEKLIVFQGLQVGEGVGVGQVEVGKVEKVGVGRVEVG 84
           +     L   V+ V  L    +G E+L    G++V   V VG V V  V ++GVG V VG
Sbjct: 97  VVGVGELGVGVVGVGELGVEVVGVEEL----GVEVVGVVDVGVVGVVGVGELGVGVVGVG 156

Query: 85  RFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEK-- 144
             G  VV VG + VE V  VG     V+ VG V+VE          L V +G V+VE+  
Sbjct: 157 ELGVGVVGVGELGVEVV-GVGVVDVEVLGVGVVDVE---------VLDVSIGVVDVEELG 216

Query: 145 VWKVGRFGELVVEVGNVEVEKVWKVGRFGEL 174
           V  VG  G   + VG V VE+   V   GEL
Sbjct: 217 VEVVGDVGVGELGVGVVVVEEFDVVVGVGEL 233

[Close]
BLAST of Cla011021 vs. NCBI nr
Match: gi|915253917|ref|XP_013297483.1| (hypothetical protein NECAME_00667 [Necator americanus])

HSP 1 Score: 63.9 bits (154), Expect = 4.4e-07
Identity = 58/127 (45.67%), Postives = 66/127 (51.97%), Query Frame = 1 

Query: 63  VGVGQVEVGKVE-KVGVGRVEVG----RFGELVVEVGNVEVEKVWKVGRFGELVVEVGNV 122
           VG   VEVG V  +VG   VEVG      G +VVEVG V VE    V   G +VVEVG V
Sbjct: 3   VGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTVVVEVGTV 62

Query: 123 EVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVKE- 182
            VE    V   G +VVEVG V VE    V   G +VVEVG V V     V   G +V E 
Sbjct: 63  VVEVGTVVVEVGTVVVEVGTVVVEVAAVVVEVGTVVVEVGTVVVLDGAVVVDVGTVVVEV 122

Query: 183 IWKKMVG 184
           +  K+VG
Sbjct: 123 VLVKLVG 129

[Close]
BLAST of Cla011021 vs. NCBI nr
Match: gi|1009390914|gb|KYN12265.1| (putative PPE family protein PPE16 [Trachymyrmex cornetzi])

HSP 1 Score: 61.6 bits (148), Expect = 2.2e-06
Identity = 70/182 (38.46%), Postives = 93/182 (51.10%), Query Frame = 1 

Query: 56  GLQVGEGVGVGQVEVGKVE--KVGVGRVEVGRFGELVVEVGNVEVEKVWKVGRFGELVVE 115
           G++V + VGVG+++VG V+  ++GVG V VG  G  VV VG + VE V  V   G  VV 
Sbjct: 71  GVEVVDVVGVGELDVGVVDVGELGVGVVGVGELGVGVVGVGELGVEVV-GVEELGVEVVG 130

Query: 116 VGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVE---------KV 175
           V +V V  V  VG  G  VV VG + V  V  VG  G  VV VG V+VE         +V
Sbjct: 131 VVDVGVVGVVGVGELGVGVVGVGELGVGVV-GVGELGVEVVGVGVVDVEVLGVGVVDVEV 190

Query: 176 WKVGRFGELVKEIWKKMVGKFRVWRVKIGKVWKVERFGELVEEIWKEEVKKFGVWRVEVG 227
             V      V+E+  ++VG   V  + +G V  VE F  +V       V + GV  V VG
Sbjct: 191 LDVSIGVVDVEELGVEVVGDVGVGELGVGVV-VVEEFDVVV------GVGELGVGVVGVG 243

[Close]
BLAST of Cla011021 vs. NCBI nr
Match: gi|1009390914|gb|KYN12265.1| (putative PPE family protein PPE16 [Trachymyrmex cornetzi])

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-04
Identity = 68/164 (41.46%), Postives = 84/164 (51.22%), Query Frame = 1 

Query: 63  VGVGQVEVGKVEKVGVGRVEVGRFGELVVEVGNVEVEKVWKVGRFGEL---VVEVGNVEV 122
           +GVG V VG+   +GVG V+VG  G  VV VG + VE V  VG  GEL   VV+VG + V
Sbjct: 40  LGVGVVGVGE---LGVGVVDVGELGVGVVGVGELGVEVVDVVG-VGELDVGVVDVGELGV 99

Query: 123 EKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVKEIWK 182
             V  VG  G  VV VG + VE V  V   G  VV V +V V  V  VG  G     +  
Sbjct: 100 GVV-GVGELGVGVVGVGELGVEVV-GVEELGVEVVGVVDVGVVGVVGVGELG-----VGV 159

Query: 183 KMVGKFRVWRVKIGKVWKVERFGELVEEIWKEEVKKFGVWRVEV 224
             VG+  V  V +G++  VE  G  V ++   EV   GV  VEV
Sbjct: 160 VGVGELGVGVVGVGEL-GVEVVGVGVVDV---EVLGVGVVDVEV 188


HSP 2 Score: 50.4 bits (119), Expect = 5.1e-03
Identity = 70/182 (38.46%), Postives = 88/182 (48.35%), Query Frame = 1 

Query: 57  LQVGEGV-GVGQ--VEVGKVEKVGVGRVEVGRFGELVVEVG------------NVEVEKV 116
           L++G GV GV +  VEV  V+++GVG V VG  G  VV+VG             VEV  V
Sbjct: 18  LELGVGVVGVEELGVEVVGVKELGVGVVGVGELGVGVVDVGELGVGVVGVGELGVEVVDV 77

Query: 117 WKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEV 176
             VG     VV+VG + V  V  VG  G  VV VG + VE V  V   G  VV V +V V
Sbjct: 78  VGVGELDVGVVDVGELGVGVV-GVGELGVGVVGVGELGVEVV-GVEELGVEVVGVVDVGV 137

Query: 177 EKVWKVGRFGELVKEIWKKMVGKFRVWRVKIGKVWKVERFGELVEEIWKEEVKKFGVWRV 224
             V  VG  G     +    VG+  V  V +G++  VE  G  V ++   EV   GV  V
Sbjct: 138 VGVVGVGELG-----VGVVGVGELGVGVVGVGEL-GVEVVGVGVVDV---EVLGVGVVDV 188


HSP 3 Score: 46.6 bits (109), Expect = 7.3e-02
Identity = 56/151 (37.09%), Postives = 72/151 (47.68%), Query Frame = 1 

Query: 25  LAAASSLSAWVICVSFLLNPALGTEKLIVFQGLQVGEGVGVGQVEVGKVEKVGVGRVEVG 84
           +     L   V+ V  L    +G E+L    G++V   V VG V V  V ++GVG V VG
Sbjct: 97  VVGVGELGVGVVGVGELGVEVVGVEEL----GVEVVGVVDVGVVGVVGVGELGVGVVGVG 156

Query: 85  RFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEKVWKVGRFGELVVEVGNVEVEK-- 144
             G  VV VG + VE V  VG     V+ VG V+VE          L V +G V+VE+  
Sbjct: 157 ELGVGVVGVGELGVEVV-GVGVVDVEVLGVGVVDVE---------VLDVSIGVVDVEELG 216

Query: 145 VWKVGRFGELVVEVGNVEVEKVWKVGRFGEL 174
           V  VG  G   + VG V VE+   V   GEL
Sbjct: 217 VEVVGDVGVGELGVGVVVVEEFDVVVGVGEL 233

The following BLAST results are available for this feature:
BLAST of Cla011021 vs. TrEMBL
Match NameE-valueIdentityDescription
W2T229_NECAM3.1e-0745.67Uncharacterized protein OS=Necator americanus GN=NECAME_00667 PE=4 SV=1[more]
A0A151IWR3_9HYME1.5e-0638.46Putative PPE family protein PPE16 OS=Trachymyrmex cornetzi GN=ALC57_15583 PE=4 S... [more]
A0A151IWR3_9HYME5.5e-0441.46Putative PPE family protein PPE16 OS=Trachymyrmex cornetzi GN=ALC57_15583 PE=4 S... [more]
BLAST of Cla011021 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|915253917|ref|XP_013297483.1|4.4e-0745.67hypothetical protein NECAME_00667 [Necator americanus][more]
gi|1009390914|gb|KYN12265.1|2.2e-0638.46putative PPE family protein PPE16 [Trachymyrmex cornetzi][more]
gi|1009390914|gb|KYN12265.1|7.8e-0441.46putative PPE family protein PPE16 [Trachymyrmex cornetzi][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011021Cla011021.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla011021Watermelon (97103) v2wmwmbB246
Cla011021Wax gourdwgowmB500
Cla011021Cucumber (Gy14) v1cgywmB581
Cla011021Cucurbita maxima (Rimu)cmawmB202
Cla011021Cucurbita maxima (Rimu)cmawmB386
Cla011021Cucurbita moschata (Rifu)cmowmB189
Cla011021Cucurbita moschata (Rifu)cmowmB378
Cla011021Melon (DHL92) v3.5.1mewmB164
Cla011021Watermelon (Charleston Gray)wcgwmB155
Cla011021Cucumber (Chinese Long) v2cuwmB042
Cla011021Cucurbita pepo (Zucchini)cpewmB516
Cla011021Bottle gourd (USVL1VR-Ls)lsiwmB205
Cla011021Cucumber (Gy14) v2cgybwmB043
Cla011021Melon (DHL92) v3.6.1medwmB162
Cla011021Cucumber (Chinese Long) v3cucwmB049