Cla011003 (gene) Watermelon (97103) v1

Overview
NameCla011003
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 17650751 .. 17651746 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACACAGTCCGAGTATTAGTGAAGCCCGGGGCGAAGTGGGACGTATCACCCACAAGGATTAAAACTTTGTCTGCTAACAGCCTATGGCCAGAGGCCAACATGTGGGTATACTTGGTGAAGAAGCGGCTAATCCCCAGGACGCATGACAGAACAGTGTTAAGGGATTGGGTGATGGCAGCTTATTGCATTATGCGTCGCATCCCCCTTGATGTCGGACGCATAATTTCGGTGCAGATAAGAGGGGTCTTCAACAAACCAAGAGGCCAACTCTTTTTCCCCTCACTTATCATGAACCTATATGCCAATGCCGCCATTGGAGGGCAAACAGAAGTGTTAGATGCAGAGAAGATGATCGAAGTCAGTGGGGTAATCGCCCATAAGACTCTACGTCGGTTGATGAGACGATCGCAACATTTGCCAGAGCCTGCTAAGGCCACCAAAAGACCTCATCAACCCACTCCGTCACCTAAAGTGTCGCCTCTAAAGCCGCAAATACAGAAGAAGGGGAAGTCATCCAAACTGAAACAAAAGACTGTGGCAAGTCTTGATGCCACCATTAAACCTTCCCCTTCCTCAAGTCCTTCACCTCCACTCCCATTAACCGCAAGAGAGCCAACGTCTCCTCCACCTCCTCCAGAAACGCAACCTCAGCCATCCACTTTCCCATCAATCCAAACTTCTTCTTCTTCCTTTTTTCAAAGAGTTGATGATTCACACCATGGAGATTTTAGCGCAACTACCATGCATCCATCATCCCCTGCATTTGACGAAACTCCATCAACTTCTCACCCCCAGCCAAATCGTCCTCACCCACAACCGCAGCCTCAACCTCAAGAAACCCAACTCGACCTCGACTGGGAGACAATGCAAACATACCTACAACAATCAATCTTGTGTCCAATGATGCATTTGATGAATATGTTAGCACGCCGGCAGACGGAGCAGTTTCACTTTACATTGAATTATATTCATCAACTATTTTCGATTTGA

mRNA sequence

ATGGAAGACACAGTCCGAGTATTAGTGAAGCCCGGGGCGAAGTGGGACGTATCACCCACAAGGATTAAAACTTTGTCTGCTAACAGCCTATGGCCAGAGGCCAACATGTGGGTATACTTGGTGAAGAAGCGGCTAATCCCCAGGACGCATGACAGAACAGTGTTAAGGGATTGGGTGATGGCAGCTTATTGCATTATGCGTCGCATCCCCCTTGATGTCGGACGCATAATTTCGGTGCAGATAAGAGGGGTCTTCAACAAACCAAGAGGCCAACTCTTTTTCCCCTCACTTATCATGAACCTATATGCCAATGCCGCCATTGGAGGGCAAACAGAAGTGTTAGATGCAGAGAAGATGATCGAAGTCAGTGGGGTAATCGCCCATAAGACTCTACGTCGGTTGATGAGACGATCGCAACATTTGCCAGAGCCTGCTAAGGCCACCAAAAGACCTCATCAACCCACTCCGTCACCTAAAGTGTCGCCTCTAAAGCCGCAAATACAGAAGAAGGGGAAGTCATCCAAACTGAAACAAAAGACTGTGGCAAGTCTTGATGCCACCATTAAACCTTCCCCTTCCTCAAGTCCTTCACCTCCACTCCCATTAACCGCAAGAGAGCCAACGTCTCCTCCACCTCCTCCAGAAACGCAACCTCAGCCATCCACTTTCCCATCAATCCAAACTTCTTCTTCTTCCTTTTTTCAAAGAGTTGATGATTCACACCATGGAGATTTTAGCGCAACTACCATGCATCCATCATCCCCTGCATTTGACGAAACTCCATCAACTTCTCACCCCCAGCCAAATCGTCCTCACCCACAACCGCAGCCTCAACCTCAAGAAACCCAACTCGACCTCGACTGGGAGACAATGCAAACATACCTACAACAATCAATCTTGTGTCCAATGATGCATTTGATGAATATGTTAGCACGCCGGCAGACGGAGCAGTTTCACTTTACATTGAATTATATTCATCAACTATTTTCGATTTGA

Coding sequence (CDS)

ATGGAAGACACAGTCCGAGTATTAGTGAAGCCCGGGGCGAAGTGGGACGTATCACCCACAAGGATTAAAACTTTGTCTGCTAACAGCCTATGGCCAGAGGCCAACATGTGGGTATACTTGGTGAAGAAGCGGCTAATCCCCAGGACGCATGACAGAACAGTGTTAAGGGATTGGGTGATGGCAGCTTATTGCATTATGCGTCGCATCCCCCTTGATGTCGGACGCATAATTTCGGTGCAGATAAGAGGGGTCTTCAACAAACCAAGAGGCCAACTCTTTTTCCCCTCACTTATCATGAACCTATATGCCAATGCCGCCATTGGAGGGCAAACAGAAGTGTTAGATGCAGAGAAGATGATCGAAGTCAGTGGGGTAATCGCCCATAAGACTCTACGTCGGTTGATGAGACGATCGCAACATTTGCCAGAGCCTGCTAAGGCCACCAAAAGACCTCATCAACCCACTCCGTCACCTAAAGTGTCGCCTCTAAAGCCGCAAATACAGAAGAAGGGGAAGTCATCCAAACTGAAACAAAAGACTGTGGCAAGTCTTGATGCCACCATTAAACCTTCCCCTTCCTCAAGTCCTTCACCTCCACTCCCATTAACCGCAAGAGAGCCAACGTCTCCTCCACCTCCTCCAGAAACGCAACCTCAGCCATCCACTTTCCCATCAATCCAAACTTCTTCTTCTTCCTTTTTTCAAAGAGTTGATGATTCACACCATGGAGATTTTAGCGCAACTACCATGCATCCATCATCCCCTGCATTTGACGAAACTCCATCAACTTCTCACCCCCAGCCAAATCGTCCTCACCCACAACCGCAGCCTCAACCTCAAGAAACCCAACTCGACCTCGACTGGGAGACAATGCAAACATACCTACAACAATCAATCTTGTGTCCAATGATGCATTTGATGAATATGTTAGCACGCCGGCAGACGGAGCAGTTTCACTTTACATTGAATTATATTCATCAACTATTTTCGATTTGA

Protein sequence

MEDTVRVLVKPGAKWDVSPTRIKTLSANSLWPEANMWVYLVKKRLIPRTHDRTVLRDWVMAAYCIMRRIPLDVGRIISVQIRGVFNKPRGQLFFPSLIMNLYANAAIGGQTEVLDAEKMIEVSGVIAHKTLRRLMRRSQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETPSTSHPQPNRPHPQPQPQPQETQLDLDWETMQTYLQQSILCPMMHLMNMLARRQTEQFHFTLNYIHQLFSI
Homology
[Close]
BLAST of Cla011003 vs. Swiss-Prot
Match: LRX5_ARATH (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana GN=LRX5 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 1.0e-06
Identity = 40/141 (28.37%), Postives = 49/141 (34.75%), Query Frame = 1 

Query: 144 PAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLPLT 203
           P+ ++  P  P PSP      P     G++S      +        PSP SSPSPPLP  
Sbjct: 547 PSPSSPTPSSPIPSPPTPSTPPTPISPGQNSP----PIIPSPPFTGPSPPSSPSPPLPPV 606

Query: 204 AREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETPST 263
              P    P P + P  +  P       S          G    +   P  P F  +PS 
Sbjct: 607 IPSPPIVGPTPSSPPPSTPTPVYSPPPPSTGYPPPPPFTGYSPPSPPPPPPPTFSPSPSI 666

Query: 264 SHPQPN--RPHPQPQPQPQET 283
             P P    P P P P P +T
Sbjct: 667 PPPPPQTYSPFPPPPPPPPQT 683


HSP 2 Score: 45.4 bits (106), Expect = 1.4e-03
Identity = 44/135 (32.59%), Postives = 45/135 (33.33%), Query Frame = 1 

Query: 151 PHQPTP--SPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPL--PLTARE 210
           P  PTP  SP  SP  P       SS        S      PSPS SPSPP+  P     
Sbjct: 485 PTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGS-----PPSPSISPSPPITVPSPPST 544

Query: 211 PTSP--PPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETPSTS 270
           PTSP  PP P +    S  PS  T S                 T   P SP  +  P   
Sbjct: 545 PTSPGSPPSPSSPTPSSPIPSPPTPS-----------------TPPTPISPGQNSPPIIP 597

Query: 271 HPQPNRPHPQPQPQP 280
            P    P P   P P
Sbjct: 605 SPPFTGPSPPSSPSP 597


HSP 3 Score: 44.7 bits (104), Expect = 2.3e-03
Identity = 45/157 (28.66%), Postives = 54/157 (34.39%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPT-PSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKP-----SPSSS 201
           P P  +   P  P  PSP +    P        + +      S      P     SP S 
Sbjct: 589 PSPPSSPSPPLPPVIPSPPIVGPTPSSPPPSTPTPVYSPPPPSTGYPPPPPFTGYSPPSP 648

Query: 202 PSPPLPLTAREPTSPPPPPET--------QPQPSTFPSIQTSSSSFFQRVDDSHHGDFSA 261
           P PP P  +  P+ PPPPP+T         P P T+   Q S S   Q      +G    
Sbjct: 649 PPPPPPTFSPSPSIPPPPPQTYSPFPPPPPPPPQTYYPPQPSPS---QPPQSPIYG---- 708

Query: 262 TTMHPSS-PAFDETPSTSHPQPNRPH----PQPQPQP 280
            T  PS  P     P  + P P  P+    PQP P P
Sbjct: 709 -TPPPSPIPYLPSPPQFASPPPPAPYYYSSPQPPPPP 737


HSP 4 Score: 40.0 bits (92), Expect = 5.7e-02
Identity = 32/93 (34.41%), Postives = 39/93 (41.94%), Query Frame = 1 

Query: 190 PSPSSSPSPPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATT 249
           PSPS SPSP  P+T   P + P P  + P PS  PS  +++ S             S TT
Sbjct: 424 PSPSISPSP--PITVPSPPTTPSPGGSPPSPSIVPSPPSTTPS-------PGSPPTSPTT 483

Query: 250 MHP--SSPAFDETPSTSHPQPNRP-HPQPQPQP 280
             P  S P+   TP+     P+ P  P P   P
Sbjct: 484 PTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSP 507

[Close]
BLAST of Cla011003 vs. Swiss-Prot
Match: PEXLP_TOBAC (Pistil-specific extensin-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.6e-06
Identity = 32/96 (33.33%), Postives = 39/96 (40.62%), Query Frame = 1 

Query: 188 IKPSPSSSPSPPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSA 247
           + P PS  PSPP P       SPPPP  + P PST P I   +  F   +  S   DF+ 
Sbjct: 60  VLPPPSPLPSPPPP-----SPSPPPPSPSPPPPSTIPLIPPFTGGFLPPLPGSKLPDFAG 119

Query: 248 ----TTMHPSSPAFDETPSTSHPQPNRPHPQPQPQP 280
                   P  P     P  + P+P+ P P  +P P
Sbjct: 120 LLPLIPNLPDVPPIGGGPPVNQPKPSSPSPLVKPPP 150


HSP 2 Score: 43.1 bits (100), Expect = 6.8e-03
Identity = 36/138 (26.09%), Postives = 47/138 (34.06%), Query Frame = 1 

Query: 150 RPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSP--SSSPSPPLPLTAREP 209
           +P   +PSP V P  P                    +  KPSP   S+  PP P  A++P
Sbjct: 136 QPKPSSPSPLVKPPPPP------------------PSPCKPSPPDQSAKQPPQPPPAKQP 195

Query: 210 TSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHP------SSPAFDETP 269
           + PPPPP  +  PS  P+ Q        +           T   P       SP     P
Sbjct: 196 SPPPPPPPVK-APSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPP 254

Query: 270 STSHPQPNRPHPQPQPQP 280
             ++P    P P P  +P
Sbjct: 256 PVAYPPVMTPSPSPAAEP 254

[Close]
BLAST of Cla011003 vs. TrEMBL
Match: A0A0W4ZSL3_PNECA (Uncharacterized protein OS=Pneumocystis carinii B80 GN=T552_00004 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-07
Identity = 42/144 (29.17%), Postives = 58/144 (40.28%), Query Frame = 1 

Query: 138 SQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPS 197
           S+  P+P    + P +P P+P   P   Q      SS L   T +S    + P P  +P+
Sbjct: 735 SEPPPQPPLDPRPPSKPYPNPPSDPSSQQDPDTSLSSNLTS-TSSSEPPPLPPPPPPAPT 794

Query: 198 PPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAF 257
           PP P     P  PPPPP ++P+P   P  +                        P  P  
Sbjct: 795 PPPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQP--------------------QPPKPPQ 854

Query: 258 DETPS-TSHPQPNRPHPQPQPQPQ 281
            E P+    PQP  P P P+PQP+
Sbjct: 855 PEPPAPPPKPQPEPPAPPPKPQPE 857

[Close]
BLAST of Cla011003 vs. TrEMBL
Match: A0A0W4ZSL3_PNECA (Uncharacterized protein OS=Pneumocystis carinii B80 GN=T552_00004 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07
Identity = 42/156 (26.92%), Postives = 61/156 (39.10%), Query Frame = 1 

Query: 138 SQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPS 197
           S+  P+P    + P +P P+P   P   Q      SS L   T +S    + P P  +P+
Sbjct: 735 SEPPPQPPLDPRPPSKPYPNPPSDPSSQQDPDTSLSSNLTS-TSSSEPPPLPPPPPPAPT 794

Query: 198 PPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAF 257
           PP P     P  PPPPP ++P+P   P  +           +            P  P  
Sbjct: 795 PPPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQPQPPKPPQPEP--------PAPPPKPQP 854

Query: 258 DETPSTSHPQPNRPHPQPQPQPQETQLDLDWETMQT 294
           +       PQP  P P P+PQP++    +   T  T
Sbjct: 855 EPPAPPPKPQPEPPAPPPKPQPEQKPTSITSSTSTT 881


HSP 2 Score: 46.2 bits (108), Expect = 8.9e-02
Identity = 32/129 (24.81%), Postives = 52/129 (40.31%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLP 201
           P PA     P  P P P     +PQ + + +    K           KP P     PP P
Sbjct: 795 PPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQPQPPKPPQPEPPAPPPKPQPEPPAPPPKP 854

Query: 202 LTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETP 261
               EP +PPP P+ + +P++  S  +++SS   ++        S T    S+     T 
Sbjct: 855 QP--EPPAPPPKPQPEQKPTSITSSTSTTSSSKTKI--------STTRKASSTKTSSTTK 913

Query: 262 STSHPQPNR 271
           +++ P P +
Sbjct: 915 TSTRPSPTK 913


HSP 3 Score: 65.5 bits (158), Expect = 1.4e-07
Identity = 42/144 (29.17%), Postives = 58/144 (40.28%), Query Frame = 1 

Query: 138 SQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPS 197
           S+  P+P    + P +P P+P   P   Q      SS L   T +S    + P P  +P+
Sbjct: 732 SEPPPQPPLDPRPPSKPYPNPPSDPSSQQDPDTSLSSNLTS-TSSSEPPPLPPPPPPAPT 791

Query: 198 PPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAF 257
           PP P     P  PPPPP ++P+P   P  +                        P  P  
Sbjct: 792 PPPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQP--------------------QPPKPPQ 851

Query: 258 DETPS-TSHPQPNRPHPQPQPQPQ 281
            E P+    PQP  P P P+PQP+
Sbjct: 852 PEPPAPPPKPQPEPPAPPPKPQPE 854

[Close]
BLAST of Cla011003 vs. TrEMBL
Match: Q6AHT0_PNECA (Protease-1 (PRT1) protein, putative OS=Pneumocystis carinii GN=PC21H1.04 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07
Identity = 42/156 (26.92%), Postives = 61/156 (39.10%), Query Frame = 1 

Query: 138 SQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPS 197
           S+  P+P    + P +P P+P   P   Q      SS L   T +S    + P P  +P+
Sbjct: 732 SEPPPQPPLDPRPPSKPYPNPPSDPSSQQDPDTSLSSNLTS-TSSSEPPPLPPPPPPAPT 791

Query: 198 PPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAF 257
           PP P     P  PPPPP ++P+P   P  +           +            P  P  
Sbjct: 792 PPPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQPQPPKPPQPEP--------PAPPPKPQP 851

Query: 258 DETPSTSHPQPNRPHPQPQPQPQETQLDLDWETMQT 294
           +       PQP  P P P+PQP++    +   T  T
Sbjct: 852 EPPAPPPKPQPEPPAPPPKPQPEQKPTSITSSTSTT 878


HSP 2 Score: 43.9 bits (102), Expect = 4.4e-01
Identity = 31/129 (24.03%), Postives = 51/129 (39.53%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLP 201
           P PA     P  P P P     +PQ + + +    K           KP P     PP P
Sbjct: 792 PPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQPQPPKPPQPEPPAPPPKPQPEPPAPPPKP 851

Query: 202 LTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETP 261
               EP +PPP P+ + +P++  S  +++SS   ++        S      S+     T 
Sbjct: 852 QP--EPPAPPPKPQPEQKPTSITSSTSTTSSSKTKI--------STIRKASSTKTSSTTK 910

Query: 262 STSHPQPNR 271
           +++ P P +
Sbjct: 912 TSTRPSPTK 910


HSP 3 Score: 65.1 bits (157), Expect = 1.9e-07
Identity = 45/138 (32.61%), Postives = 52/138 (37.68%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLP 201
           P PA  +  P  P+P P   P  P        S       +   A   PSP S PSPP P
Sbjct: 328 PSPAPPSPPPSPPSPPPPPPPSPPSPPPSPPPS-------SPSPAPSPPSPPSPPSPPSP 387

Query: 202 LTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETP 261
             +  P SPPPPP   P PS  PS                    S  +  PS P    +P
Sbjct: 388 PPSSPPPSPPPPPPPSPPPSP-PSPSPPP---------------SPPSPPPSPPPSSPSP 442

Query: 262 STSHPQPNRPHPQPQPQP 280
           + S P P  P P P P P
Sbjct: 448 APSPPSPPSPPPSPPPSP 442

[Close]
BLAST of Cla011003 vs. TrEMBL
Match: W5PQH5_SHEEP (Uncharacterized protein OS=Ovis aries PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 49/154 (31.82%), Postives = 59/154 (38.31%), Query Frame = 1 

Query: 140 HLPEPAKATKRPHQPT--------------PSPKVSPLKPQIQKKGKSSKLKQKTVASLD 199
           H P P     RP  P+              PSP ++PL P       S+ L+   ++S  
Sbjct: 266 HGPRPIPTGPRPGLPSSAGPLGAGAARGLPPSPPLTPLPPSSLPPPPSAPLETLPLSS-- 325

Query: 200 ATIKPSPSSSPSPPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDF 259
               P  S SP+PP P     P SPPPPP   P PS  PS   SS S             
Sbjct: 326 ----PPSSPSPAPPSP--PPSPPSPPPPPPPSP-PSPPPSPPPSSPS------------- 385

Query: 260 SATTMHPSSPAFDETPSTSHPQPNRPHPQPQPQP 280
                 PS P+    PS   P P+ P P P P P
Sbjct: 386 ----PAPSPPSPPSPPSPPSPPPSSPPPSPPPPP 393


HSP 2 Score: 54.7 bits (130), Expect = 2.5e-04
Identity = 42/136 (30.88%), Postives = 46/136 (33.82%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLP 201
           P P      P  P  SP  SP  P       S                PSPS  PSPP P
Sbjct: 369 PSPPSPPSPPSPPPSSPPPSPPPPPPPSPPPSP---------------PSPSPPPSPPSP 428

Query: 202 LTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETP 261
             +  P+SP P P     PS  PS   S  S       S           PS P    +P
Sbjct: 429 PPSPPPSSPSPAPSPPSPPSPPPSPPPSPPSPPPPPPPSSPPSPPPPPSPPSPPPSSPSP 488

Query: 262 STSHPQPNRPHPQPQP 278
           + S P P  P P P P
Sbjct: 489 APSPPSPPSPPPSPPP 489


HSP 3 Score: 53.9 bits (128), Expect = 4.3e-04
Identity = 41/139 (29.50%), Postives = 49/139 (35.25%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSS-PSPPL 201
           P P   +  P  P+PSP  SP  P       S                PSP+ S PSPP 
Sbjct: 390 PPPPPPSPPPSPPSPSPPPSPPSPPPSPPPSS----------------PSPAPSPPSPPS 449

Query: 202 PLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDET 261
           P  +  P+ P PPP   P     P    S  S             S  +  PS P    +
Sbjct: 450 PPPSPPPSPPSPPPPPPPSSPPSPPPPPSPPSPPPSSPSPAPSPPSPPSPPPSPPPSSPS 509

Query: 262 PSTSHPQPNRPHPQPQPQP 280
           P +S   P  P P P P P
Sbjct: 510 PPSSPSPPPSPSPSPPPSP 512


HSP 4 Score: 64.3 bits (155), Expect = 3.2e-07
Identity = 46/146 (31.51%), Postives = 58/146 (39.73%), Query Frame = 1 

Query: 139 QHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSP 198
           Q LP P      P +P P P   P +PQ       ++  Q   A L    +P P+  P+ 
Sbjct: 176 QPLPAPL-----PTEPQPLPAPLPTEPQPLPAPLPTE-PQPLPAPLPTEPQPLPAPLPTE 235

Query: 199 PLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFD 258
           P PL A  PT P P P+ QPQP   P                           P+ P   
Sbjct: 236 PQPLPAPLPTEPQPQPQPQPQPQPQPQPAEPQPQ---------------PQPQPAEPQPQ 295

Query: 259 ETPSTSHPQPN-RPHPQPQPQPQETQ 284
             P  + PQP  +P PQPQPQPQ  +
Sbjct: 296 PQPQPAEPQPQPQPQPQPQPQPQPAE 300

[Close]
BLAST of Cla011003 vs. TrEMBL
Match: A0A161ZXD6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020865 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 46/149 (30.87%), Postives = 59/149 (39.60%), Query Frame = 1 

Query: 139 QHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSP 198
           Q +P P      P QP P+P   P +PQ       ++  Q   A L    +P P+  P+ 
Sbjct: 139 QPVPNPVPLPTEP-QPQPNPGPQPTEPQPMPAPLPTE-PQPLPAPLPTEPQPLPAPLPTE 198

Query: 199 PLPLTAREPTSPPPPPE---TQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSP 258
           P PL A  PT P P P    T+PQP   P                           P+ P
Sbjct: 199 PQPLPAPLPTEPQPLPAPLPTEPQPLPAPL--------------------------PTEP 258

Query: 259 AFDETPSTSHPQPN-RPHPQPQPQPQETQ 284
                P  + PQP  +P PQPQPQPQ  +
Sbjct: 259 QPLPAPLPTEPQPQPQPQPQPQPQPQPAE 259


HSP 2 Score: 55.8 bits (133), Expect = 1.1e-04
Identity = 41/139 (29.50%), Postives = 52/139 (37.41%), Query Frame = 1 

Query: 150 RPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLPLTAREPTS 209
           +P +P P P   P +PQ       ++  Q   A L    +P P+  P+ P PL A  PT 
Sbjct: 160 QPTEPQPMPAPLPTEPQPLPAPLPTE-PQPLPAPLPTEPQPLPAPLPTEPQPLPAPLPTE 219

Query: 210 PPP-----PPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETPSTS 269
           P P     P E QP P+  P+                          P      +     
Sbjct: 220 PQPLPAPLPTEPQPLPAPLPT-------------------------EPQPQPQPQPQPQP 272

Query: 270 HPQPNRPHPQPQPQPQETQ 284
            PQP  P PQPQPQP E Q
Sbjct: 280 QPQPAEPQPQPQPQPAEPQ 272


HSP 3 Score: 62.8 bits (151), Expect = 9.2e-07
Identity = 53/157 (33.76%), Postives = 64/157 (40.76%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSP--SPP 201
           P  +  +  P   +P P  SP  P       SS     T         PSPSS P  SPP
Sbjct: 490 PSSSPPSSSPSSSSPPPSSSP--PPSSPPSPSSAPSSST--------SPSPSSPPSSSPP 549

Query: 202 LP------LTAREPTSPP----PPPETQPQPSTFPSIQTSSSSFFQRVDDS---HHGDFS 261
            P       T+  P+SPP    PPP + P PS+ PS  TS S        S        S
Sbjct: 550 SPSSAPSSSTSPSPSSPPSPSSPPPSSPPSPSSAPSSSTSPSPSSPPSPSSPPPSSPPSS 609

Query: 262 ATTMHPSSPAFDETPSTSHPQPNRP----HPQPQPQP 280
           +T+  PSSP     PS+S P P+ P     P P P P
Sbjct: 610 STSPSPSSPPSSSPPSSSPPSPSSPPSSSPPSPSPPP 636

[Close]
BLAST of Cla011003 vs. NCBI nr
Match: gi|703082781|ref|XP_010092041.1| (hypothetical protein L484_000844 [Morus notabilis])

HSP 1 Score: 67.4 bits (163), Expect = 5.4e-08
Identity = 33/101 (32.67%), Postives = 58/101 (57.43%), Query Frame = 1 

Query: 1   MEDTVRVLVKPGAKWDVSPTRIKTLSANSLWPEANMWVYLVKKRLIPRTHDRTVLRDWVM 60
           +++ ++ +   GA+W +S     T + + L P A +W + +  RL+  TH +T+ R+  +
Sbjct: 157 LKEVLKTIAILGAQWLLSAKGSYTCNRHELQPAAKVWYHFLASRLLLSTHGKTISRNRAI 216

Query: 61  AAYCIMRRIPLDVGRIISVQIRGVFNKPRGQLFFPSLIMNL 102
             Y ++   P++VGR+I  QIR    K +G L+FPSLI  L
Sbjct: 217 LLYAVLVGKPINVGRLIIDQIRACAEKGKGGLYFPSLISEL 257

[Close]
BLAST of Cla011003 vs. NCBI nr
Match: gi|968586686|gb|KTW31359.1| (hypothetical protein T552_00004 [Pneumocystis carinii B80])

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-07
Identity = 42/144 (29.17%), Postives = 58/144 (40.28%), Query Frame = 1 

Query: 138 SQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPS 197
           S+  P+P    + P +P P+P   P   Q      SS L   T +S    + P P  +P+
Sbjct: 735 SEPPPQPPLDPRPPSKPYPNPPSDPSSQQDPDTSLSSNLTS-TSSSEPPPLPPPPPPAPT 794

Query: 198 PPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAF 257
           PP P     P  PPPPP ++P+P   P  +                        P  P  
Sbjct: 795 PPPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQP--------------------QPPKPPQ 854

Query: 258 DETPS-TSHPQPNRPHPQPQPQPQ 281
            E P+    PQP  P P P+PQP+
Sbjct: 855 PEPPAPPPKPQPEPPAPPPKPQPE 857

[Close]
BLAST of Cla011003 vs. NCBI nr
Match: gi|968586686|gb|KTW31359.1| (hypothetical protein T552_00004 [Pneumocystis carinii B80])

HSP 1 Score: 64.7 bits (156), Expect = 3.5e-07
Identity = 42/156 (26.92%), Postives = 61/156 (39.10%), Query Frame = 1 

Query: 138 SQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPS 197
           S+  P+P    + P +P P+P   P   Q      SS L   T +S    + P P  +P+
Sbjct: 735 SEPPPQPPLDPRPPSKPYPNPPSDPSSQQDPDTSLSSNLTS-TSSSEPPPLPPPPPPAPT 794

Query: 198 PPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAF 257
           PP P     P  PPPPP ++P+P   P  +           +            P  P  
Sbjct: 795 PPPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQPQPPKPPQPEP--------PAPPPKPQP 854

Query: 258 DETPSTSHPQPNRPHPQPQPQPQETQLDLDWETMQT 294
           +       PQP  P P P+PQP++    +   T  T
Sbjct: 855 EPPAPPPKPQPEPPAPPPKPQPEQKPTSITSSTSTT 881


HSP 2 Score: 46.2 bits (108), Expect = 1.3e-01
Identity = 32/129 (24.81%), Postives = 52/129 (40.31%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLP 201
           P PA     P  P P P     +PQ + + +    K           KP P     PP P
Sbjct: 795 PPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQPQPPKPPQPEPPAPPPKPQPEPPAPPPKP 854

Query: 202 LTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETP 261
               EP +PPP P+ + +P++  S  +++SS   ++        S T    S+     T 
Sbjct: 855 QP--EPPAPPPKPQPEQKPTSITSSTSTTSSSKTKI--------STTRKASSTKTSSTTK 913

Query: 262 STSHPQPNR 271
           +++ P P +
Sbjct: 915 TSTRPSPTK 913


HSP 3 Score: 65.5 bits (158), Expect = 2.0e-07
Identity = 42/144 (29.17%), Postives = 58/144 (40.28%), Query Frame = 1 

Query: 138 SQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPS 197
           S+  P+P    + P +P P+P   P   Q      SS L   T +S    + P P  +P+
Sbjct: 732 SEPPPQPPLDPRPPSKPYPNPPSDPSSQQDPDTSLSSNLTS-TSSSEPPPLPPPPPPAPT 791

Query: 198 PPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAF 257
           PP P     P  PPPPP ++P+P   P  +                        P  P  
Sbjct: 792 PPPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQP--------------------QPPKPPQ 851

Query: 258 DETPS-TSHPQPNRPHPQPQPQPQ 281
            E P+    PQP  P P P+PQP+
Sbjct: 852 PEPPAPPPKPQPEPPAPPPKPQPE 854

[Close]
BLAST of Cla011003 vs. NCBI nr
Match: gi|51215118|emb|CAH17890.1| (Protease-1 (PRT1) protein, putative [Pneumocystis carinii])

HSP 1 Score: 64.7 bits (156), Expect = 3.5e-07
Identity = 42/156 (26.92%), Postives = 61/156 (39.10%), Query Frame = 1 

Query: 138 SQHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPS 197
           S+  P+P    + P +P P+P   P   Q      SS L   T +S    + P P  +P+
Sbjct: 732 SEPPPQPPLDPRPPSKPYPNPPSDPSSQQDPDTSLSSNLTS-TSSSEPPPLPPPPPPAPT 791

Query: 198 PPLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAF 257
           PP P     P  PPPPP ++P+P   P  +           +            P  P  
Sbjct: 792 PPPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQPQPPKPPQPEP--------PAPPPKPQP 851

Query: 258 DETPSTSHPQPNRPHPQPQPQPQETQLDLDWETMQT 294
           +       PQP  P P P+PQP++    +   T  T
Sbjct: 852 EPPAPPPKPQPEPPAPPPKPQPEQKPTSITSSTSTT 878


HSP 2 Score: 43.9 bits (102), Expect = 6.4e-01
Identity = 31/129 (24.03%), Postives = 51/129 (39.53%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLP 201
           P PA     P  P P P     +PQ + + +    K           KP P     PP P
Sbjct: 792 PPPAPTPAPPPPPPPPPSRPEPQPQPRPEPQPQPPKPPQPEPPAPPPKPQPEPPAPPPKP 851

Query: 202 LTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETP 261
               EP +PPP P+ + +P++  S  +++SS   ++        S      S+     T 
Sbjct: 852 QP--EPPAPPPKPQPEQKPTSITSSTSTTSSSKTKI--------STIRKASSTKTSSTTK 910

Query: 262 STSHPQPNR 271
           +++ P P +
Sbjct: 912 TSTRPSPTK 910


HSP 3 Score: 64.3 bits (155), Expect = 4.5e-07
Identity = 46/146 (31.51%), Postives = 58/146 (39.73%), Query Frame = 1 

Query: 139 QHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSP 198
           Q LP P      P +P P P   P +PQ       ++  Q   A L    +P P+  P+ 
Sbjct: 176 QPLPAPL-----PTEPQPLPAPLPTEPQPLPAPLPTE-PQPLPAPLPTEPQPLPAPLPTE 235

Query: 199 PLPLTAREPTSPPPPPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFD 258
           P PL A  PT P P P+ QPQP   P                           P+ P   
Sbjct: 236 PQPLPAPLPTEPQPQPQPQPQPQPQPQPAEPQPQ---------------PQPQPAEPQPQ 295

Query: 259 ETPSTSHPQPN-RPHPQPQPQPQETQ 284
             P  + PQP  +P PQPQPQPQ  +
Sbjct: 296 PQPQPAEPQPQPQPQPQPQPQPQPAE 300

[Close]
BLAST of Cla011003 vs. NCBI nr
Match: gi|1021033986|gb|KZM91770.1| (hypothetical protein DCAR_020865 [Daucus carota subsp. sativus])

HSP 1 Score: 58.9 bits (141), Expect = 1.9e-05
Identity = 46/149 (30.87%), Postives = 59/149 (39.60%), Query Frame = 1 

Query: 139 QHLPEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSP 198
           Q +P P      P QP P+P   P +PQ       ++  Q   A L    +P P+  P+ 
Sbjct: 139 QPVPNPVPLPTEP-QPQPNPGPQPTEPQPMPAPLPTE-PQPLPAPLPTEPQPLPAPLPTE 198

Query: 199 PLPLTAREPTSPPPPPE---TQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSP 258
           P PL A  PT P P P    T+PQP   P                           P+ P
Sbjct: 199 PQPLPAPLPTEPQPLPAPLPTEPQPLPAPL--------------------------PTEP 258

Query: 259 AFDETPSTSHPQPN-RPHPQPQPQPQETQ 284
                P  + PQP  +P PQPQPQPQ  +
Sbjct: 259 QPLPAPLPTEPQPQPQPQPQPQPQPQPAE 259


HSP 2 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 41/139 (29.50%), Postives = 52/139 (37.41%), Query Frame = 1 

Query: 150 RPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSPSPPLPLTAREPTS 209
           +P +P P P   P +PQ       ++  Q   A L    +P P+  P+ P PL A  PT 
Sbjct: 160 QPTEPQPMPAPLPTEPQPLPAPLPTE-PQPLPAPLPTEPQPLPAPLPTEPQPLPAPLPTE 219

Query: 210 PPP-----PPETQPQPSTFPSIQTSSSSFFQRVDDSHHGDFSATTMHPSSPAFDETPSTS 269
           P P     P E QP P+  P+                          P      +     
Sbjct: 220 PQPLPAPLPTEPQPLPAPLPT-------------------------EPQPQPQPQPQPQP 272

Query: 270 HPQPNRPHPQPQPQPQETQ 284
            PQP  P PQPQPQP E Q
Sbjct: 280 QPQPAEPQPQPQPQPAEPQ 272


HSP 3 Score: 62.8 bits (151), Expect = 1.3e-06
Identity = 53/157 (33.76%), Postives = 64/157 (40.76%), Query Frame = 1 

Query: 142 PEPAKATKRPHQPTPSPKVSPLKPQIQKKGKSSKLKQKTVASLDATIKPSPSSSP--SPP 201
           P  +  +  P   +P P  SP  P       SS     T         PSPSS P  SPP
Sbjct: 490 PSSSPPSSSPSSSSPPPSSSP--PPSSPPSPSSAPSSST--------SPSPSSPPSSSPP 549

Query: 202 LP------LTAREPTSPP----PPPETQPQPSTFPSIQTSSSSFFQRVDDS---HHGDFS 261
            P       T+  P+SPP    PPP + P PS+ PS  TS S        S        S
Sbjct: 550 SPSSAPSSSTSPSPSSPPSPSSPPPSSPPSPSSAPSSSTSPSPSSPPSPSSPPPSSPPSS 609

Query: 262 ATTMHPSSPAFDETPSTSHPQPNRP----HPQPQPQP 280
           +T+  PSSP     PS+S P P+ P     P P P P
Sbjct: 610 STSPSPSSPPSSSPPSSSPPSPSSPPSSSPPSPSPPP 636

The following BLAST results are available for this feature:
BLAST of Cla011003 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LRX5_ARATH1.0e-0628.37Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana GN=LRX5 PE=2... [more]
PEXLP_TOBAC6.6e-0633.33Pistil-specific extensin-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
BLAST of Cla011003 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0W4ZSL3_PNECA1.4e-0729.17Uncharacterized protein OS=Pneumocystis carinii B80 GN=T552_00004 PE=4 SV=1[more]
A0A0W4ZSL3_PNECA2.4e-0726.92Uncharacterized protein OS=Pneumocystis carinii B80 GN=T552_00004 PE=4 SV=1[more]
Q6AHT0_PNECA2.4e-0726.92Protease-1 (PRT1) protein, putative OS=Pneumocystis carinii GN=PC21H1.04 PE=4 SV... [more]
W5PQH5_SHEEP1.3e-0531.82Uncharacterized protein OS=Ovis aries PE=4 SV=1[more]
A0A161ZXD6_DAUCA1.3e-0530.87Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020865 PE=4 SV=1[more]
BLAST of Cla011003 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|703082781|ref|XP_010092041.1|5.4e-0832.67hypothetical protein L484_000844 [Morus notabilis][more]
gi|968586686|gb|KTW31359.1|2.0e-0729.17hypothetical protein T552_00004 [Pneumocystis carinii B80][more]
gi|968586686|gb|KTW31359.1|3.5e-0726.92hypothetical protein T552_00004 [Pneumocystis carinii B80][more]
gi|51215118|emb|CAH17890.1|3.5e-0726.92Protease-1 (PRT1) protein, putative [Pneumocystis carinii][more]
gi|1021033986|gb|KZM91770.1|1.9e-0530.87hypothetical protein DCAR_020865 [Daucus carota subsp. sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011003Cla011003.1mRNA