Cla010767 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla010767
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr7 : 29687300 .. 29688647 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAAGAGGAGATTCTACAGGCTTGAACATGGTGATAACGACAATGCTTCAGATTCATCTGTATCATCATCTGACTCTGAACCAGAAGTAGGAGCGGAAGAATCACAAGATGATGTAGAAGTTCAAGAAGATGATGAGTCCTGCTCTACCTCATCTGGTTTGTTCATCTTTATACCATGATTTCTCATAGAATACTAATAGGCTCAATTTCACTAATCAGGAGATCCATGTCTCTATATTTCCTTTAATCTTATACTAGTATTAGTTTTTGCACTTATCATACTATTCTATTTGGAATGTTCTAGTCAGAAAACTTATTGTTCTGCGTTGCTGTCTGTTTTACTTTGGCCTCCACCAAATAAGAGAGACAGATAATTTCTAGTATAGCTAAATACATTGGAGACAATAACATTTAGTTCATATTTCTTAATTCTTTAATTGAAGAAAAAATATTCTAAATGACTACTATGCGGGCAAATTTAATCCAGGCATGCATAGGTGCACTGCTATTGTATTGTAGTGAAAGCACACACCTGCGTTAATTAATATTTGACTAATTATCAATATTTTTTCATTTCAGGGTATGAAAGCGAGGATAGCTCTGTTAACGAAGTTGATATTGACTCGTCAGGTTTTCTTTTTCTTGTCTATTAAATCACTATTGCTTTGTATGAAGTGTTGCTTCTTCCTGGTCAACAGTTGACATTGCAACACTTTTACCCATTGAACTTAAAAATGGATTCTGAAATTCCTTTATACGTGCAATTGACTATATATTTTTCTAGCTATATATGCATTATATAGAACTTAAGATGTAACTTGGAATTAGTACAATGACAGCTTTGGTTGCTTATTTAATTTCAACTGAGGTTTATTTCTTAAGCATTATGATATTATCTTTTGAATTGACGATTTATTTTGGCTTCACAGATGTTTGATATCCGTTTTATTCTTTGTATCTCAGGTCTTCCGAGTACTGAAGATGATCCTGACATTGGAAAAGAAATCCAATCTCTTACTGGGACTCAGGTACCTGATGAAATCCCTTCGGATACTCAGTTACCTGATGAAAGCCCTTTGGGAACACTGGACCTTCATTCAGACATCTTATCCATGAAGGAACCATTACCGGCAGATATTCCAGTGTGCATCCTGAAATGCAAATCAGTTTTTAAGTGTAAGTTGTGCCCTAGAGTTGTCTGTTTGAATGAGGAGACATTAAAGGCTCATCTTAAATCCAAGGTATATACGTGATCTTACTCTCTCCTATTTAGCCTAGTCAGTTAATTTTTATTTATATTTAATTTTTTTCTAGATTGTGGAGTCTACAGCGTGTTCCATGTAG

mRNA sequence

ATGATAAAGAGGAGATTCTACAGGCTTGAACATGGTGATAACGACAATGCTTCAGATTCATCTGTATCATCATCTGACTCTGAACCAGAAGTAGGAGCGGAAGAATCACAAGATGATGTAGAAGTTCAAGAAGATGATGAGTCCTGCTCTACCTCATCTGGGTATGAAAGCGAGGATAGCTCTGTTAACGAAGTTGATATTGACTCGTCAGGTCTTCCGAGTACTGAAGATGATCCTGACATTGGAAAAGAAATCCAATCTCTTACTGGGACTCAGGTACCTGATGAAATCCCTTCGGATACTCAGTTACCTGATGAAAGCCCTTTGGGAACACTGGACCTTCATTCAGACATCTTATCCATGAAGGAACCATTACCGGCAGATATTCCAGTGTGCATCCTGAAATGCAAATCAGTTTTTAAGTGTAAGTTGTGCCCTAGAGTTGTCTGTTTGAATGAGGAGACATTAAAGGCTCATCTTAAATCCAAGATTGTGGAGTCTACAGCGTGTTCCATGTAG

Coding sequence (CDS)

ATGATAAAGAGGAGATTCTACAGGCTTGAACATGGTGATAACGACAATGCTTCAGATTCATCTGTATCATCATCTGACTCTGAACCAGAAGTAGGAGCGGAAGAATCACAAGATGATGTAGAAGTTCAAGAAGATGATGAGTCCTGCTCTACCTCATCTGGGTATGAAAGCGAGGATAGCTCTGTTAACGAAGTTGATATTGACTCGTCAGGTCTTCCGAGTACTGAAGATGATCCTGACATTGGAAAAGAAATCCAATCTCTTACTGGGACTCAGGTACCTGATGAAATCCCTTCGGATACTCAGTTACCTGATGAAAGCCCTTTGGGAACACTGGACCTTCATTCAGACATCTTATCCATGAAGGAACCATTACCGGCAGATATTCCAGTGTGCATCCTGAAATGCAAATCAGTTTTTAAGTGTAAGTTGTGCCCTAGAGTTGTCTGTTTGAATGAGGAGACATTAAAGGCTCATCTTAAATCCAAGATTGTGGAGTCTACAGCGTGTTCCATGTAG

Protein sequence

MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGAEESQDDVEVQEDDESCSTSSGYESEDSSVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLDLHSDILSMKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSKIVESTACSM

Homology

[Close]

BLAST of Cla010767 vs. TrEMBL
Match: M5X7B2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016221mg PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 93/168 (55.36%), Postives = 112/168 (66.67%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGAEESQDD-----VEVQEDDESCSTSSGY 60
           MIKRRFY+LEHGD D  S+SS SSSDSE E  A E  DD      E++ED ++CSTSSGY
Sbjct: 1   MIKRRFYKLEHGDRDGPSNSSSSSSDSEIEPEAIEDSDDDDDVVEELEEDAQACSTSSGY 60

Query: 61  ESEDSSVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLDLH 120
           +SEDSS NEV  DS  LP  EDD   G E Q          +P   QL  +S    L+  
Sbjct: 61  QSEDSSANEVPDDSLDLPIYEDDAKTGNERQ----------VPLANQLFGKSGSEILEEQ 120

Query: 121 SDILSMKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
           S+I++ +E LP D P C++KCKS FKC++CPRVVCLNEETL+AHLKSK
Sbjct: 121 SNIVANEESLPVDFPDCVVKCKSAFKCRICPRVVCLNEETLRAHLKSK 158

[Close]

BLAST of Cla010767 vs. TrEMBL
Match: A0A061ENZ9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_019327 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-38
Identity = 93/170 (54.71%), Postives = 114/170 (67.06%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGA-EESQDDVE------VQEDDESCSTSS 60
           MIKRRFY+ EHGD DN SDSS SSSDSE +V A EES+ + E      V+E D++CSTSS
Sbjct: 1   MIKRRFYKFEHGDKDNVSDSSSSSSDSELDVEATEESESESEEEAVAQVKETDQTCSTSS 60

Query: 61  GYESEDSSVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLD 120
           GYESEDSS NEV +DS+GL   ++D            T    EI    +LP +     L+
Sbjct: 61  GYESEDSSANEVGVDSAGLIDDDNDE-----------TDDDREIFIKDKLPSKHGAQMLE 120

Query: 121 LHSDILSMKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
             S+  + ++ LP D P CILKCKSVFKCKLCPR+VCLNEET++AHLKSK
Sbjct: 121 TISNTPTKEDSLPDDFPTCILKCKSVFKCKLCPRIVCLNEETMRAHLKSK 159

[Close]

BLAST of Cla010767 vs. TrEMBL
Match: A0A0D2PB70_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G178700 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.8e-36
Identity = 90/171 (52.63%), Postives = 112/171 (65.50%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGA-EESQDDVE------VQEDDESCSTSS 60
           MIKRRFY+ EH D DN SDSS SSSDSE EV A EES+ + E      V +++++CS+SS
Sbjct: 1   MIKRRFYKFEHADKDNVSDSSSSSSDSELEVEASEESESEPEQEVAAQVNQNNQACSSSS 60

Query: 61  GYESEDSSVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLD 120
           GYESEDSS NEV +DS+GL   +DD D  ++ + +  T          +L  E       
Sbjct: 61  GYESEDSSANEVGVDSAGL--IDDDNDESEDDKQIFITN---------RLHAEHGAQIRG 120

Query: 121 LHSDILSMKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSKI 165
              D+   KEPLP D P CILKCKSVFKCKLCPR+VCLNEET++AH  SK+
Sbjct: 121 KKWDVPCNKEPLPDDFPACILKCKSVFKCKLCPRIVCLNEETVRAHFNSKV 160

[Close]

BLAST of Cla010767 vs. TrEMBL
Match: A0A0B0MYA7_GOSAR (Pre-mRNA-splicing factor PRP9 OS=Gossypium arboreum GN=F383_30607 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.9e-36
Identity = 89/170 (52.35%), Postives = 112/170 (65.88%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGA-EESQDDVE------VQEDDESCSTSS 60
           MIKRRFY+ EH D DN SDSS SSSDSE EV A EES+ + E      V +++++CS+SS
Sbjct: 1   MIKRRFYKFEHADKDNVSDSSSSSSDSELEVEASEESESEPEQEVAAQVNQNNQACSSSS 60

Query: 61  GYESEDSSVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLD 120
           GYESEDSS NEV +DS+GL   +DD D  ++ + +   ++  E  +  +           
Sbjct: 61  GYESEDSSANEVGVDSAGL--IDDDNDESEDDKQIFINRLHTEHGAQIR----------G 120

Query: 121 LHSDILSMKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
             SD+   KEPLP D P CILKCKSVFKCKLCPR+VCLNEET +AH  SK
Sbjct: 121 KKSDVPCNKEPLPDDFPACILKCKSVFKCKLCPRIVCLNEETARAHFNSK 158

[Close]

BLAST of Cla010767 vs. TrEMBL
Match: A0A0D2QUV4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G178700 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.4e-36
Identity = 90/170 (52.94%), Postives = 111/170 (65.29%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGA-EESQDDVE------VQEDDESCSTSS 60
           MIKRRFY+ EH D DN SDSS SSSDSE EV A EES+ + E      V +++++CS+SS
Sbjct: 1   MIKRRFYKFEHADKDNVSDSSSSSSDSELEVEASEESESEPEQEVAAQVNQNNQACSSSS 60

Query: 61  GYESEDSSVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLD 120
           GYESEDSS NEV +DS+GL   +DD D  ++ + +  T          +L  E       
Sbjct: 61  GYESEDSSANEVGVDSAGL--IDDDNDESEDDKQIFITN---------RLHAEHGAQIRG 120

Query: 121 LHSDILSMKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
              D+   KEPLP D P CILKCKSVFKCKLCPR+VCLNEET++AH  SK
Sbjct: 121 KKWDVPCNKEPLPDDFPACILKCKSVFKCKLCPRIVCLNEETVRAHFNSK 159

[Close]

BLAST of Cla010767 vs. NCBI nr
Match: gi|659086692|ref|XP_008444072.1| (PREDICTED: uncharacterized protein LOC103487507 isoform X3 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 2.1e-80
Identity = 152/163 (93.25%), Postives = 155/163 (95.09%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGAEESQDDVEVQEDDESCSTSSGYESEDS 60
           MIKRRFYRLEHGDNDNASDSSVSSSDSEP+   EESQDDVEVQEDDESCSTSSGYESEDS
Sbjct: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPDAYIEESQDDVEVQEDDESCSTSSGYESEDS 60

Query: 61  SVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLDLHSDILS 120
           SVNEVDIDSSG PSTEDDPDIGKEIQS +GTQVPDEIPSDTQLPDE PLGTLDL SDILS
Sbjct: 61  SVNEVDIDSSGRPSTEDDPDIGKEIQSHSGTQVPDEIPSDTQLPDERPLGTLDLRSDILS 120

Query: 121 MKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
           MKE LPAD+PVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK
Sbjct: 121 MKESLPADVPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 163

[Close]

BLAST of Cla010767 vs. NCBI nr
Match: gi|659086688|ref|XP_008444069.1| (PREDICTED: uncharacterized protein LOC103487507 isoform X1 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 2.1e-80
Identity = 152/163 (93.25%), Postives = 155/163 (95.09%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGAEESQDDVEVQEDDESCSTSSGYESEDS 60
           MIKRRFYRLEHGDNDNASDSSVSSSDSEP+   EESQDDVEVQEDDESCSTSSGYESEDS
Sbjct: 49  MIKRRFYRLEHGDNDNASDSSVSSSDSEPDAYIEESQDDVEVQEDDESCSTSSGYESEDS 108

Query: 61  SVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLDLHSDILS 120
           SVNEVDIDSSG PSTEDDPDIGKEIQS +GTQVPDEIPSDTQLPDE PLGTLDL SDILS
Sbjct: 109 SVNEVDIDSSGRPSTEDDPDIGKEIQSHSGTQVPDEIPSDTQLPDERPLGTLDLRSDILS 168

Query: 121 MKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
           MKE LPAD+PVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK
Sbjct: 169 MKESLPADVPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 211

[Close]

BLAST of Cla010767 vs. NCBI nr
Match: gi|449438957|ref|XP_004137254.1| (PREDICTED: uncharacterized protein LOC101216062 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 3.7e-77
Identity = 147/164 (89.63%), Postives = 151/164 (92.07%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGAEESQDDVEVQE-DDESCSTSSGYESED 60
           MIKRRFYRLEHGDNDNASDSSVSSSDSEP+   EESQDDVEVQE DDESCSTSSGYESED
Sbjct: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPDAYVEESQDDVEVQEDDDESCSTSSGYESED 60

Query: 61  SSVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLDLHSDIL 120
           SSVNEVD+DSSG PSTEDDPD+GKEIQS TGTQVPDEIPSD QLPDE P GTLDLHSDIL
Sbjct: 61  SSVNEVDVDSSGCPSTEDDPDVGKEIQSRTGTQVPDEIPSDMQLPDECPSGTLDLHSDIL 120

Query: 121 SMKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
           S K  LPAD PVC+LKCKSVFKCKLCPRVVCLNEETLKAHLKSK
Sbjct: 121 STKASLPADTPVCVLKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164

[Close]

BLAST of Cla010767 vs. NCBI nr
Match: gi|659086690|ref|XP_008444071.1| (PREDICTED: uncharacterized protein LOC103487507 isoform X2 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-67
Identity = 135/163 (82.82%), Postives = 138/163 (84.66%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGAEESQDDVEVQEDDESCSTSSGYESEDS 60
           MIKRRFYRLEHGDNDNASDSSVSSSDSEP+   EESQDDVEVQEDDESCSTSSG      
Sbjct: 49  MIKRRFYRLEHGDNDNASDSSVSSSDSEPDAYIEESQDDVEVQEDDESCSTSSGR----- 108

Query: 61  SVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLDLHSDILS 120
                       PSTEDDPDIGKEIQS +GTQVPDEIPSDTQLPDE PLGTLDL SDILS
Sbjct: 109 ------------PSTEDDPDIGKEIQSHSGTQVPDEIPSDTQLPDERPLGTLDLRSDILS 168

Query: 121 MKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
           MKE LPAD+PVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK
Sbjct: 169 MKESLPADVPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 194

[Close]

BLAST of Cla010767 vs. NCBI nr
Match: gi|645246289|ref|XP_008229284.1| (PREDICTED: uncharacterized protein LOC103328655 [Prunus mume])

HSP 1 Score: 173.3 bits (438), Expect = 3.6e-40
Identity = 94/167 (56.29%), Postives = 113/167 (67.66%), Query Frame = 1


Query: 1   MIKRRFYRLEHGDNDNASDSSVSSSDSEPEVGAEESQDD----VEVQEDDESCSTSSGYE 60
           MIKRRFY+LEHGD D  S+SS SSSDSE E  A E  DD     E++ED ++CSTSSGY+
Sbjct: 1   MIKRRFYKLEHGDRDGPSNSSSSSSDSEIEPEAIEDSDDDDVVEELEEDAQACSTSSGYQ 60

Query: 61  SEDSSVNEVDIDSSGLPSTEDDPDIGKEIQSLTGTQVPDEIPSDTQLPDESPLGTLDLHS 120
           SEDSS NEV  DSS LP  EDD   G E Q          +P   QL  +S    L+  S
Sbjct: 61  SEDSSANEVPDDSSDLPINEDDATTGNERQ----------VPLANQLFGKSGSEILEEQS 120

Query: 121 DILSMKEPLPADIPVCILKCKSVFKCKLCPRVVCLNEETLKAHLKSK 164
           +I++ +E LP D P C++KCKS FKC++CPRVVCLNEETL+AHLKSK
Sbjct: 121 NIVANEESLPVDFPDCVVKCKSAFKCRICPRVVCLNEETLRAHLKSK 157

The following BLAST results are available for this feature:

BLAST of Cla010767 vs. TrEMBL


Match Name	E-value	Identity	Description
M5X7B2_PRUPE	2.8e-39	55.36	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016221mg PE=4 S...	[more]
A0A061ENZ9_THECC	1.4e-38	54.71	Uncharacterized protein OS=Theobroma cacao GN=TCM_019327 PE=4 SV=1	[more]
A0A0D2PB70_GOSRA	3.8e-36	52.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G178700 PE=4 SV=1	[more]
A0A0B0MYA7_GOSAR	4.9e-36	52.35	Pre-mRNA-splicing factor PRP9 OS=Gossypium arboreum GN=F383_30607 PE=4 SV=1	[more]
A0A0D2QUV4_GOSRA	8.4e-36	52.94	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G178700 PE=4 SV=1	[more]

BLAST of Cla010767 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086692\|ref\|XP_008444072.1\|	2.1e-80	93.25	PREDICTED: uncharacterized protein LOC103487507 isoform X3 [Cucumis melo]	[more]
gi\|659086688\|ref\|XP_008444069.1\|	2.1e-80	93.25	PREDICTED: uncharacterized protein LOC103487507 isoform X1 [Cucumis melo]	[more]
gi\|449438957\|ref\|XP_004137254.1\|	3.7e-77	89.63	PREDICTED: uncharacterized protein LOC101216062 [Cucumis sativus]	[more]
gi\|659086690\|ref\|XP_008444071.1\|	2.0e-67	82.82	PREDICTED: uncharacterized protein LOC103487507 isoform X2 [Cucumis melo]	[more]
gi\|645246289\|ref\|XP_008229284.1\|	3.6e-40	56.29	PREDICTED: uncharacterized protein LOC103328655 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU12546	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla010767	Cla010767.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU12546	WMU12546	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36332	FAMILY NOT NAMED	coord: 2..163 score: 9.9
None	No IPR available	PFAM	PF12874	zf-met	coord: 140..163 score: 9.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla010767	Cla97C07G143460	Watermelon (97103) v2	wmwmbB174
Cla010767	Csa4G132690	Cucumber (Chinese Long) v2	cuwmB309
Cla010767	MELO3C010379	Melon (DHL92) v3.5.1	mewmB519
Cla010767	ClCG07G016450	Watermelon (Charleston Gray)	wcgwmB372
Cla010767	CSPI04G10210	Wild cucumber (PI 183967)	cpiwmB312
Cla010767	CmoCh14G011900	Cucurbita moschata (Rifu)	cmowmB221
Cla010767	Lsi07G009340	Bottle gourd (USVL1VR-Ls)	lsiwmB447
Cla010767	Cp4.1LG03g15230	Cucurbita pepo (Zucchini)	cpewmB603
Cla010767	CsGy4G009850	Cucumber (Gy14) v2	cgybwmB285
Cla010767	MELO3C010379.2	Melon (DHL92) v3.6.1	medwmB505
Cla010767	CsaV3_4G010370	Cucumber (Chinese Long) v3	cucwmB320
Cla010767	Bhi01G001674	Wax gourd	wgowmB179

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla010767	Cucurbita maxima (Rimu)	cmawmB433