Cla010749 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla010749
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	ATP-dependent DNA helicase 2 subunit KU70 (AHRD V1 **-- KU70_ORYSJ); contains Interpro domain(s) IPR016194 Spen Paralogue and Orthologue C-terminal-like
Location	Chr7 : 29441024 .. 29447247 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGACAGAGAGATCATTCATTTGTGCGGATACAGGTGCATTATTTCTGGAGCCTTCAAAGCGATTTCAGCTTTATAAAAAGTAAGTCTTATATACATTAGCCTTTCTTAATATTAAACATAAAATTTCATCAGGAAATTAATCTTTCATTGCCTACTACTATTCTTTTTCTTTGATTTTATTGAAGTAAGAAAGATAATTATTGGCAAATTATCTTGCATATAACTATTTATGAGCAACATGAATGAAAAAAGAATGAGAGAAGCTTTCTGTAGGAATTTCTAATTTTTGGCAAATTATATTACATATTACTTTAAAGGGGTTGGAACTATGCAGAATTGCAAATTATTGAAGTATCAACACATACTGAAACTGGAAAATATTTATGCTTTTATTGCATGCCTAATATATTATATATTACTCGGTGAATTTCTGTAATAATTTTGCTTAATATCTAGTCAGGTAATTAAATTCTCTGGGGAGGAGTTATCTGAGATCAAGGGAGTATCTGCTGGACATCTTCGGCTTCTCGGTTTCAAGCCATTGAGTTGCTTAAAAGATTATCACAATTTACGTTCATCAACATTCTTATATCCTAGTGATGAGGTTGCTTTTCATCTTTTTTTTCTTCCCCTTGCATCACATTTGCTGTGCTTTTATTTATATTCTTAGGCTTTTCAAAACAATGAATAGTTAGGTGCTGTCTGCTTAACATTCTTTCACCTTCCAGGCTGTTTTGATGCTTCTCACATGTTTGTTTCTTTCACCTTTTATACATTTGTTGGCCACTTTCCTTCCTTATGACAACCACTTGCATGCATAAACAATGCAACAGATATTGTCTAATATCTGGAATTACATGTGATGGTTTTCATGATCCTCAATATTTTGTTATACTGATTGTGGTTGAAAGGTGATCTGTTCAAATGTGCCATATCATCGCTGCCTAAAGAAAATCCTTACTTGGATTTTGACGGTCATTATTGGTGTAGGAAATGGGTGGTAGCACTTGCATCTTCATTGCCCTCCACAGGTCCATGGTGAAGCTCAATCGGTTTGTACATATAACCCCATCCTTACCTAGTTACCTCATCTAATTAATGCCATATTTTTTCTCCATTGTTCCAAAAATCGTTATCTGCCATATATCTTTTATAGTAGTAAAGTTTTTTTTTCCCCCTTTCACAGTAATTATAGTTGTATGCTTGTCAACATACAAATGTTTTTATGTGCCTGCAATAGTCCTTTGGGGCTTAACTGCAAAGCACCAAGAAAAATGGGGGTATTTTATGTTTGATAAACGCAATAGAAAAATTTGAACAATTTTTTAGATATGTAAAAATAATGAAATTATGAATGATATAATGGAAATTTTTGAAAACTTATTGTGCATAAAAATGAGCATTTTTAATAGAATTTCACATATTTTAAATAATAATTTTTAAAAAAAAGATGAAAAAGAGGAGTTTAGGTGCCGAGTTCATGCATTGAACATGTTTTTTCAAGATACAACAACATATATGCGGTGAGAGTGCTTTGGTACAATGGGACGAACCAGTTAGTGAGCTTAGGCTCAGTCATGTCCTTTGTTGAGTAAGTTTTATTTAGTGGATTGTCAAACTGGTATGAATTTCTGCACATGTTAGAATCCCGCACAAAACGGGGAAATCTACTGGATTATTTGAGAGGTTGCGCTGAGGCAAGTTTGATAGGGTTCATACTGATAACAACCAGTTTCATTTTGGATATCACGATTCATGTGGGAAGGCCAGTAGTAGGGACTAGGGATTGAAGATTAATGAAAAAAGTAGTAGCTGCAAAGGCTCAGTTTCGAGAGATCCAGAATCTTTCAATTCTACATTTTTATCTTTAAGTAAAGAATTGGTTTCGCTTTCTGGCCCAACCCAGACTGAACAATTGGACAGTATACAGAACGGATCTTGTTTCTTGAAAATTTTTAGGGCTTAAGACGTAAATGGCCTGTTACACTAACACTCAGAAATTGGATGAAACTGTGTACCTTGGGTTTACCTCCTCCATGGGGTTGGGTACTTGTACTACGGATGGAAGTTGACCATAGATTATCAATAAGCTTGCAATTTATATTCTCACTTGTAACTTCTCACAAAATCATTGAAAAGTTTTGTTTCAAAGAAAAAAAATGTTTCTCAAGATATATTCTTCCTGGTTGATGAAAGAGTAGTTAATGAGAGCAAATCCTTTTAGAACATTGATTCAAGCTATTGCAAGTATGTCGTCGGATGCAGCTTATTGACCCTTTTTTATCTCTCGTTTTTACTTTATCCTTTACGAATAAATTTTAAGTTTGAAATTCCTTGTAAATGTTCCATGCCTAAAATTCTCTGAAAAAATTAGGAATGATTTAATTACACATCCATCTGTTGTGATATGTGGTTCGCCGTGTATCCAACTAGAGCTGTATGTTTTGTCCATTAAGTGTTGGCTTATATTACTGGAATGAACGTATAGTTCTCAATTGTTATTGATAAATGGCAGATTTTTAATTGATGTGGTTCTCTGCAACGATCCTTTGTTTTTACCCAGTTTTGCAGTTGCTTTCTTGGGTAGTCCATCTCGCCCCCAACTAGTTGCTCTTGTGGCCCAAGTAAGATGAAACTATCCTACCTTACTCAAAAGTTCTTACAATGAGGAATGCCTTGTATAAAGTGCTGGTTTTTATTATTATGTTTTATAAAAACCTTCACTGATGAAACATTGGATTACAGGAAATAATAGTTGTGACATGATATGTTCAATTTTCCTTGGGATGTCAATCACAAAGTGACTAGCGCTATTGTAGATAAATGCACTGGACAGATTGTTGAATTCACGATTTTTAGGATTTTTATGCACAATATTGTAACAGCTAATATATTTCATTTTGTAGTAGGCCTTGTCTGTAAAGGGCCATCAGCAATCTAGTGCTCTCTTTCATTTTATTTTCTTGCTACTTGGTCATCTCGGCTACCACTTTTAATTTGTGTTATTGATTTAATGGACATCAGATCACTGAAGTCGAAAAATTGTTTTGAAGCTCCAGAATGGCATTTGTTATTGTTGCATTTTGAACTTTCAGTTTTCACAAGGAAAGAACCTCTCCAAGGGAATGGAAAAATAAGAAAAAAAAAGAGTTTTAAAAAAAGACCCAAAGAAACAACAAAACTCCAAAAATCATAAAAGCATAGAAAGCATTCAACTATTTAGAGGAACCAACTATCCAACCAAAAAGCTGCACCAAACTTAACTCAAAAAGATTGAATATTCGGTATTATCAATTGTCTCTTGTTCTAACTTAGTTTAATGGCTTCTTGAAACATCACAGGATGAGATCATTACTGCTGGGGGACAGGTTGAGCCACCAGGAATGAACATGTTATATCTACCTTATGCTGATGACATCCGACATGTTGAGGAGGCAAGAAAAATGTTTTAGTTGGGAAGTAGCTTTCTTGAAGTTGCTGCTAATTATATACTGTAATGTGCTGCAGCTTCATCCGGATCCTGACATTGCACCTAGAGCGACTGACGATCAAGTAAAAAAGGCTGCTGCTTTAATGAAGCGCATTGACTTGAAAGACTTTTCAGTTTGCCAGTTTGCCAATCCTGGTATGGTTACAGATCAACCTTGTAATTTGATAGGAACCAGAAATTGAAATGGAAATGAATAGAATATAGTATTAATATGAAAAAAAGGGAAAAGTACGAGTTTCTCAAGCACTTCGCTAAATATTAGCAATTTTGATAGTCACATTTCTTATAGAGGCGACAATAATTAATTTCAATTTTTACTGATGGAATCTTTTCCTTCCCGACCAAACAGGGAAAGCATAATTTTATGTTGTCATGCTGCAACATAACTCTTATAAAATGCATGCTCCCTTATTTAAATGCCTCTTTTTGGGCGTTTGTGTCTCAAGATTTTTGTAACTATCCTCAAGATCTTAGCATTTGAGATTGCAGCCTCTTTTTCAAGGTAGCCAGTTGGCCTATAGTTGTGGTAGTCTCTCTTTTTGCTGGGGGTTGTTTCATTTATTATCAATGAAACATCCTATTTTAAAATGAATAAATAAATAAATAAAACCTATATATTTTTTTAGCTTGATAAAAGGTATATATTGTATCACTGCTTTTTGTGAGGACATGTTTTTCCTTGATTCATTTAGGTCGTCAATTAGCTTGATGGTAAAAGTTACACAGGTATATGGATGGAAAGAAGAGTCTTATTTTTATTTTTATTTTTTTAACATTTTGTTATATAGTTGAATCTTACCCCTCATCAGTTCAGGGCTGATGAATTCATATATATGTAACATAACTCTAGCGTGTGGAACAATATGGAGTATTCTCTGATGTTTTGTCTCTCGCATTATGTCACAATAATAAATGGTTTTTTGAGTATATTGCATTATTGCATCCGTGAAGTTCTTGCCAGCAATTCCATTTAAATAAACAAGTAGCTGTTTTTTGTTGGTATTATGGAGAGCATTGGTGTGGTTCCAAAGTCAGCTATATTATGATAAGTCTGCAACAAAGGATAATAGTGCATCACGGCCCTCAAACTGGTGGAAAGCAAGCTCCATCTCTCTTTTAGAACGCAAACAAAAGAGTTTTACTAAGAAAAGATTAATGTTTACAAAGCTAAAAGATATTGTGGAGCTTGAATATCAATGTTATAATACTACATTAAGGAACCTTTTTTCTCTCTTCCCACCAAATCAATGTCATTGTTTCCCCTTTCAAATTTTGGATTCTCGTGGCTTGAAGGCGTCACCAGTTTAGTCCAGCCCTAGTGAAGTTGGTTTTTGATGATAGCTTTTTTGCTTTTACGTTGCGAGACAACTTCAATGTATAATGGAAATCAACTTTCAGCCTTGCAGAGACATTATGCAGTACTGCAGGCTTTAGCCTTGGAAGAAGATGAGATGCCTGAGGTTAATGACGAAACAGTCCCTGATGAAGAAGGAATGTCTAGGTATGATTATGATGTAGCGGTTTGTCTACCTCTTTTCTTTAGCTACTACGGAATTGTATAGTGTATTGCTATTGCTAAATGAGCAAAAACAAGAAGAAATCAGAGAACGATTAAAAAGTTTCAACTGCTGCCATCTTAAACCTGGAGGTAAATAAACCCTTCTCACTTTATTCAATGAAATAAGGCATATATATGGCCTCTCAGTGCAACCAGAGTTAAGTACATCAGAGAGAAAATAATAACCATAAAACTGACTAAGGTTAAGTACAAATCTGAAGTCTAATACTAATCTTATCTGCTAAAGGCTTTCTGTTTCTGCATGTTTTATTGTAGACCTGGGGTCGTCAAGACATTAGAAGAATTCAAACTATCGGTTTATGGGGAAAATTACGAGGAGGAGGAAGCTGGAAAAGGAAAAGTGAGTGAAGCTTCAAAAAAGAGAAAAGCTATTTCAGAGACTGCTTCAAAAAAGTGTAAAGAATATGACTGGGCTGACCTTGCAGACAATGGAAAGGTGAAACAACTCCATCTCTTCTTCCCCATATCTGTCTTGTTTTCGTCTCTGCAGGAAGGAGGGGAATTGGGAGGGTAGGATTCACAAAATATATTACCTCGAAAATTTTTCAATGTAGCTGCCACATTGTGGTTGCCTCCTGCATGGTTAACTAGAACTTTGGCTGTTTGGAACGATGAGTTGGTTATTATAGTCAGTGGTTATTATACTTGGTATGTTGTATAATCTGGGAGTTATAATAGTCTCTGTTCGGGGTGCAAACTATTTTAGATAATGAGAGTTTTTAAATAGTTTTATTGTAGCTAAGTGTAAGTTAATAATTGGAAACTTGCACTATAGTAATGGGAGGTCCAAACATTGTGTGGGCTATAATAGCTCACTCCACCCAAGGCAAGTTGGGGGTGCAAATGCCCCTTTCCTTTGTTTCTCTCATGACATGGTACAAATCCACCCACTACATTGTTTCAACCTCTTTAATTGTTTTATCCCCTAGACTTTTGGTTGAAACTTATATGCATAATTGGGATGAATGTGATTTTCTTCTCGTGATCTCGTAGTATCAACGATATGAATAAAAAATGTGTTGGTTTGTGTTTTGCAGTTGAAGGAATTGTCGGTTGTTGAGTTGAAGTATTATTTGACAGCACATGATCTTCCTGTGTCCGGAAAGAAGGAAGCCTTGATAAGCAGGATATTATCACATATGGGAAAGTAA

mRNA sequence

ATGCAGACAGAGAGATCATTCATTTGTGCGGATACAGGTGCATTATTTCTGGAGCCTTCAAAGCGATTTCAGCTTTATAAAAATCAGGTAATTAAATTCTCTGGGGAGGAGTTATCTGAGATCAAGGGAGTATCTGCTGGACATCTTCGGCTTCTCGGTTTCAAGCCATTGAGTTGCTTAAAAGATTATCACAATTTACGTTCATCAACATTCTTATATCCTAGTGATGAGGAAATGGGTGGTAGCACTTGCATCTTCATTGCCCTCCACAGGTCCATGGTGAAGCTCAATCGATTTTTAATTGATGTGGTTCTCTGCAACGATCCTTTGTTTTTACCCAGTTTTGCAGTTGCTTTCTTGGGTAGTCCATCTCGCCCCCAACTAGTTGCTCTTGTGGCCCAAGATGAGATCATTACTGCTGGGGGACAGGTTGAGCCACCAGGAATGAACATGTTATATCTACCTTATGCTGATGACATCCGACATCTTCATCCGGATCCTGACATTGCACCTAGAGCGACTGACGATCAAGTAAAAAAGGCTGCTGCTTTAATGAAGCGCATTGACTTGAAAGACTTTTCAGTTTGCCAGTTTGCCAATCCTGCCTTGCAGAGACATTATGCAGTACTGCAGGCTTTAGCCTTGGAAGAAGATGAGATGCCTGAGGTTAATGACGAAACAGTCCCTGATGAAGAAGGAATGTCTAGACCTGGGGTCGTCAAGACATTAGAAGAATTCAAACTATCGGTTTATGGGGAAAATTACGAGGAGGAGGAAGCTGGAAAAGGAAAAGTGAGTGAAGCTTCAAAAAAGAGAAAAGCTATTTCAGAGACTGCTTCAAAAAAGTGTAAAGAATATGACTGGGCTGACCTTGCAGACAATGGAAAGGTGAAACAACTCCATCTCTTCTTCCCCATATCTGTCTTGTTTTCGTCTCTGCAGGAAGGAGGGGAATTGGGAGGCTCACTCCACCCAAGGCAAGTTGGGGGTGCAAATGCCCCTTTCCTTTGTTTCTCTCATGACATGTTGAAGGAATTGTCGGTTGTTGAGTTGAAGTATTATTTGACAGCACATGATCTTCCTGTGTCCGGAAAGAAGGAAGCCTTGATAAGCAGGATATTATCACATATGGGAAAGTAA

Coding sequence (CDS)

ATGCAGACAGAGAGATCATTCATTTGTGCGGATACAGGTGCATTATTTCTGGAGCCTTCAAAGCGATTTCAGCTTTATAAAAATCAGGTAATTAAATTCTCTGGGGAGGAGTTATCTGAGATCAAGGGAGTATCTGCTGGACATCTTCGGCTTCTCGGTTTCAAGCCATTGAGTTGCTTAAAAGATTATCACAATTTACGTTCATCAACATTCTTATATCCTAGTGATGAGGAAATGGGTGGTAGCACTTGCATCTTCATTGCCCTCCACAGGTCCATGGTGAAGCTCAATCGATTTTTAATTGATGTGGTTCTCTGCAACGATCCTTTGTTTTTACCCAGTTTTGCAGTTGCTTTCTTGGGTAGTCCATCTCGCCCCCAACTAGTTGCTCTTGTGGCCCAAGATGAGATCATTACTGCTGGGGGACAGGTTGAGCCACCAGGAATGAACATGTTATATCTACCTTATGCTGATGACATCCGACATCTTCATCCGGATCCTGACATTGCACCTAGAGCGACTGACGATCAAGTAAAAAAGGCTGCTGCTTTAATGAAGCGCATTGACTTGAAAGACTTTTCAGTTTGCCAGTTTGCCAATCCTGCCTTGCAGAGACATTATGCAGTACTGCAGGCTTTAGCCTTGGAAGAAGATGAGATGCCTGAGGTTAATGACGAAACAGTCCCTGATGAAGAAGGAATGTCTAGACCTGGGGTCGTCAAGACATTAGAAGAATTCAAACTATCGGTTTATGGGGAAAATTACGAGGAGGAGGAAGCTGGAAAAGGAAAAGTGAGTGAAGCTTCAAAAAAGAGAAAAGCTATTTCAGAGACTGCTTCAAAAAAGTGTAAAGAATATGACTGGGCTGACCTTGCAGACAATGGAAAGGTGAAACAACTCCATCTCTTCTTCCCCATATCTGTCTTGTTTTCGTCTCTGCAGGAAGGAGGGGAATTGGGAGGCTCACTCCACCCAAGGCAAGTTGGGGGTGCAAATGCCCCTTTCCTTTGTTTCTCTCATGACATGTTGAAGGAATTGTCGGTTGTTGAGTTGAAGTATTATTTGACAGCACATGATCTTCCTGTGTCCGGAAAGAAGGAAGCCTTGATAAGCAGGATATTATCACATATGGGAAAGTAA

Protein sequence

MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCLKDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFLGSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRHLHPDPDIAPRATDDQVKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRPGVVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKVKQLHLFFPISVLFSSLQEGGELGGSLHPRQVGGANAPFLCFSHDMLKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK

Homology

[Close]

BLAST of Cla010749 vs. Swiss-Prot
Match: KU70_ORYSJ (ATP-dependent DNA helicase 2 subunit KU70 OS=Oryza sativa subsp. japonica GN=KU70 PE=1 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.5e-102
Identity = 182/304 (59.87%), Postives = 239/304 (78.62%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++ ERSFIC DTGAL  +P KRFQ+Y ++++KFS  ELS++K VS+ HLRLLGFKPL  L
Sbjct: 304 LKAERSFICNDTGALIQDPQKRFQVYNDKIVKFSTRELSDVKRVSSHHLRLLGFKPLDYL 363

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STF+YPSDE++ GST +F+ALH SM +L RF                A+AF 
Sbjct: 364 KDYHNLRPSTFIYPSDEQIFGSTRVFVALHSSMRRLGRF----------------ALAFY 423

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH---LHPDPDIAPRATDDQ 180
           G+P+RPQLVAL+AQ+E+ +AGGQ+EPPG++M+YLPY+DD+R+   +H   D APRATD+Q
Sbjct: 424 GNPTRPQLVALIAQEEVTSAGGQIEPPGIHMIYLPYSDDVRYPEEVHLTSDDAPRATDEQ 483

Query: 181 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRP 240
           +KKA+ L++RIDLK+FSVCQF+NPALQRHY +L+ALAL EDEMP+V DET+PDEEG++RP
Sbjct: 484 IKKASNLLRRIDLKNFSVCQFSNPALQRHYGILEALALGEDEMPDVKDETLPDEEGLARP 543

Query: 241 GVVKTLEEFKLSVYGENYEEEEA-GKGKVSEASKKRKAISETASKKCKEYDWADLADNGK 300
            VVK +EEFK SVYGENY++EEA      + ASKKRKA+++ A++K   ++WA+LAD GK
Sbjct: 544 VVVKAVEEFKASVYGENYDQEEAEAAAAKAGASKKRKALTDAAAEKSAAHNWAELADTGK 591

HSP 2 Score: 342.0 bits (876), Expect = 8.1e-93
Identity = 190/382 (49.74%), Postives = 248/382 (64.92%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++ ERSFIC DTGAL  +P KRFQ+Y ++++KFS  ELS++K VS+ HLRLLGFKPL  L
Sbjct: 304 LKAERSFICNDTGALIQDPQKRFQVYNDKIVKFSTRELSDVKRVSSHHLRLLGFKPLDYL 363

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STF+YPSDE++ GST +F+ALH SM +L RF                A+AF 
Sbjct: 364 KDYHNLRPSTFIYPSDEQIFGSTRVFVALHSSMRRLGRF----------------ALAFY 423

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH---LHPDPDIAPRATDDQ 180
           G+P+RPQLVAL+AQ+E+ +AGGQ+EPPG++M+YLPY+DD+R+   +H   D APRATD+Q
Sbjct: 424 GNPTRPQLVALIAQEEVTSAGGQIEPPGIHMIYLPYSDDVRYPEEVHLTSDDAPRATDEQ 483

Query: 181 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRP 240
           +KKA+ L++RIDLK+FSVCQF+NPALQRHY +L+ALAL EDEMP+V DET+PDEEG++RP
Sbjct: 484 IKKASNLLRRIDLKNFSVCQFSNPALQRHYGILEALALGEDEMPDVKDETLPDEEGLARP 543

Query: 241 GVVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKV 300
            VVK                          A ++ KA S       +E   A  A  G  
Sbjct: 544 VVVK--------------------------AVEEFKA-SVYGENYDQEEAEAAAAKAGAS 603

Query: 301 KQLHLFFPISVLFSSLQEGGELGGSLHPRQVGGANAPFLCFSHDMLKELSVVELKYYLTA 360
           K+       +   S+     EL  +                    LK+++VV+LK YL+A
Sbjct: 604 KKRKALTDAAAEKSAAHNWAELADT------------------GKLKDMTVVDLKSYLSA 624

Query: 361 HDLPVSGKKEALISRILSHMGK 380
           H LPVSGKKEAL+SRIL+H+GK
Sbjct: 664 HGLPVSGKKEALVSRILTHLGK 624

[Close]

BLAST of Cla010749 vs. Swiss-Prot
Match: KU70_ARATH (ATP-dependent DNA helicase 2 subunit KU70 OS=Arabidopsis thaliana GN=KU70 PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 5.1e-95
Identity = 184/304 (60.53%), Postives = 226/304 (74.34%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++ ERS+IC DTGA+  +P +R Q YKNQ I F+ EELS++K +S GHLRLLGFKPLSCL
Sbjct: 307 VKVERSYICTDTGAIMQDPIQRIQPYKNQNIMFTVEELSQVKRISTGHLRLLGFKPLSCL 366

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNL+ STFLYPSD+E+ GST  FIALHRSM++L R                FAVAF 
Sbjct: 367 KDYHNLKPSTFLYPSDKEVIGSTRAFIALHRSMIQLER----------------FAVAFY 426

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIR---HLHPDPDI-APRATDD 180
           G  + P+LVALVAQDEI + GGQVEPPG+NM+YLPYA+DIR    LH  P + APRA+DD
Sbjct: 427 GGTTPPRLVALVAQDEIESDGGQVEPPGINMIYLPYANDIRDIDELHSKPGVAAPRASDD 486

Query: 181 QVKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSR 240
           Q+KKA+ALM+R++LKDFSVCQFANPALQRHYA+LQA+AL+E+E+ E  DET+PDEEGM+R
Sbjct: 487 QLKKASALMRRLELKDFSVCQFANPALQRHYAILQAIALDENELRETRDETLPDEEGMNR 546

Query: 241 PGVVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGK 300
           P VVK +E+FK S+YG++ +EE     K  E SKKRKA      K    YD+ +LA  GK
Sbjct: 547 PAVVKAIEQFKQSIYGDDPDEESDSGAK--EKSKKRKAGDADDGK----YDYIELAKTGK 588

HSP 2 Score: 55.1 bits (131), Expect = 2.0e-06
Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1


Query: 343 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
           LK+L+VVELK YLTA++L VSGKKE LI+RIL+H+GK
Sbjct: 585 LKDLTVVELKTYLTANNLLVSGKKEVLINRILTHIGK 621

[Close]

BLAST of Cla010749 vs. Swiss-Prot
Match: XRCC6_CHICK (X-ray repair cross-complementing protein 5 OS=Gallus gallus GN=XRCC6 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-29
Identity = 96/286 (33.57%), Postives = 150/286 (52.45%), Query Frame = 1


Query: 1   MQTERSFICADTGALFL-EPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSC 60
           ++T+       TG+L L   +KR Q Y N+ I    EE  E+K   +  L L+GFKPLS 
Sbjct: 318 VKTKTRVFNGKTGSLLLPSDTKRAQTYGNRQIAMEKEETEEVKRFDSPGLFLIGFKPLSM 377

Query: 61  LKDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAF 120
           LK +H++R S F+YP +  + GST +F AL    ++       + LC          +A 
Sbjct: 378 LKQHHHIRPSQFMYPEESLVTGSTTLFNALLMKCLEKE----VMALCR--------YIAR 437

Query: 121 LGSPSRPQLVALVAQDEIITAGG-QVEPPGMNMLYLPYADDIRHLHPDPDIAPRATDDQV 180
             +P  P++VAL+ Q+E +     Q+ PPG ++++LPYADD R++     +   A  +QV
Sbjct: 438 RNTP--PRIVALIPQEEEVDEQKVQIAPPGFHIIFLPYADDKRNVDFTEKVP--ANREQV 497

Query: 181 KKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRPG 240
            K   +++++  K +    F NP LQ+H+  L+ALAL+  E  +  D T+P  E MSR  
Sbjct: 498 DKMKGIIQKLRFK-YRTDSFENPVLQQHFRNLEALALDMLEPEQAEDLTMPKTEEMSR-R 557

Query: 241 VVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCK 285
           +   +EEFK  VY  +Y  E        +A+K+++A    A K+ K
Sbjct: 558 LGNLVEEFKQLVYPPDYSPE-------GKAAKRKQAGDAQAEKRPK 578

[Close]

BLAST of Cla010749 vs. Swiss-Prot
Match: KU70_ASPSO (ATP-dependent DNA helicase II subunit 1 OS=Aspergillus sojae GN=ku70 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.5e-25
Identity = 104/374 (27.81%), Postives = 175/374 (46.79%), Query Frame = 1


Query: 10  ADTGALFLEPSKRFQLYK--NQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCLKDYHNLR 69
           AD  A  +E  +  + YK     + F+ EE+  ++      +R++GFKPLS L  + N++
Sbjct: 329 ADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNFGDPVIRIIGFKPLSALPFWANIK 388

Query: 70  SSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFLG-SPSRP 129
             +F+YPS+E+  GST +F ALH+++++  +  +               V F+    + P
Sbjct: 389 HPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAAL---------------VWFIARKNASP 448

Query: 130 QLVALVAQDEIITAGG-QVEPPGMNMLYLPYADDIRHLHPDP--DIAPRATDDQVKKAAA 189
            L A+VA +E +   G Q  PPGM ++ LP+ADD+R  +P+    +AP    DQ++    
Sbjct: 449 VLGAMVAGEEKLDESGVQKFPPGMWIIPLPFADDVRQ-NPETTLHVAPEPLIDQMRYIVQ 508

Query: 190 LMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRPGVVKTL 249
            + ++    +   ++ NP+LQ HY +LQALAL+ED   +  D+T+P    +      K  
Sbjct: 509 QL-QLPKASYDPFKYPNPSLQWHYRILQALALDEDLPEKPEDKTLPRYRQID-----KRT 568

Query: 250 EEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKVKQLHLF 309
            ++ LS + +  E++ A   K+S    K   +  +A  +  E + A      KVK     
Sbjct: 569 GDYVLS-WADELEKQYA---KISAHGPKSTLVERSAKDRTSEVEDAAPKPYKKVK----- 628

Query: 310 FPISVLFSSLQEGGELGGSLHPRQVGGANAPFLCFSHDMLKELSVVELKYYLTAHDLPVS 369
                      E G       P Q G             L +L+V  LK +L AH    +
Sbjct: 629 -------VETDEQGVEDVVRAPYQKGS------------LSKLTVPVLKNFLKAHGRSAA 652

Query: 370 GKKEALISRILSHM 378
           GKK+ L+ R+  ++
Sbjct: 689 GKKKELVERVEEYL 652

[Close]

BLAST of Cla010749 vs. Swiss-Prot
Match: XRCC6_HUMAN (X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 9.4e-25
Identity = 95/290 (32.76%), Postives = 145/290 (50.00%), Query Frame = 1


Query: 5   RSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCLKDYH 64
           R+F  +  G L    +KR Q+Y ++ I    EE  E+K      L L+GFKPL  LK +H
Sbjct: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360

Query: 65  NLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFLGSPS 124
            LR S F+YP +  + GS+ +F AL             ++ C +       A     +P 
Sbjct: 361 YLRPSLFVYPEESLVIGSSTLFSAL-------------LIKCLE----KEVAALCRYTPR 420

Query: 125 R---PQLVALVAQDEIITAGG-QVEPPGMNMLYLPYADDIRHLHPDPDIAPRATDDQVKK 184
           R   P  VALV Q+E +     QV PPG  +++LP+ADD R +     I   AT +QV K
Sbjct: 421 RNIPPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKI--MATPEQVGK 480

Query: 185 AAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRPGVV 244
             A+++++    +    F NP LQ+H+  L+ALAL+  E  +  D T+P  E M++  + 
Sbjct: 481 MKAIVEKLRF-TYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNK-RLG 540

Query: 245 KTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWAD 291
             ++EFK  VY  +Y  E    GKV+    KRK  +E +  K  + ++++
Sbjct: 541 SLVDEFKELVYPPDYNPE----GKVT----KRKHDNEGSGSKRPKVEYSE 561

[Close]

BLAST of Cla010749 vs. TrEMBL
Match: A0A0A0KXI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017100 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 7.5e-146
Identity = 269/301 (89.37%), Postives = 275/301 (91.36%), Query Frame = 1


Query: 3   TERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCLKD 62
           TERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIK VSAGHL+LLGFKPLSCLKD
Sbjct: 232 TERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKRVSAGHLQLLGFKPLSCLKD 291

Query: 63  YHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFLGS 122
           YHNLR STFLYPSDE M GSTCIFIALHRSMVKLNRF                AVAF GS
Sbjct: 292 YHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRF----------------AVAFFGS 351

Query: 123 PSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH---LHPDPDIAPRATDDQVK 182
           PSRPQLVALVAQDEIITA GQVEPPGMNMLYLPYADDIRH   LHP+PDIAPRATDDQVK
Sbjct: 352 PSRPQLVALVAQDEIITAAGQVEPPGMNMLYLPYADDIRHVEELHPNPDIAPRATDDQVK 411

Query: 183 KAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRPGV 242
           KAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGM+RPGV
Sbjct: 412 KAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGV 471

Query: 243 VKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKVKQ 301
           VKTLEEFKLSVYGENYEEEEAGKGKVSE SKKRKAISETAS+KCKEYDWADLADNGK+K+
Sbjct: 472 VKTLEEFKLSVYGENYEEEEAGKGKVSEVSKKRKAISETASQKCKEYDWADLADNGKLKE 516

[Close]

BLAST of Cla010749 vs. TrEMBL
Match: A0A0A0KXI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017100 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.7e-10
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 1


Query: 343 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
           LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK
Sbjct: 513 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 549

HSP 2 Score: 429.1 bits (1102), Expect = 5.6e-117
Identity = 218/303 (71.95%), Postives = 251/303 (82.84%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++TERSFICADTGAL  EP+KRFQ YK + IKFS +ELSEIK VS GHLRL GFKPLS L
Sbjct: 306 LKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STF++PSD+E+ GSTC FIALHRSM++L RF                AVAF 
Sbjct: 366 KDYHNLRPSTFVFPSDKEVVGSTCTFIALHRSMLRLKRF----------------AVAFY 425

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIR---HLHPDPDIAPRATDDQ 180
           G+PS P+LVALVAQDEI+ AGGQVEPPGM+M+YLPY+DDIR    LH D D  PRA+DD+
Sbjct: 426 GNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE 485

Query: 181 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRP 240
           VKKAAALMKRIDLKDFSVCQFANP+LQRHYAVLQALALEED+MPE+ DETVPDEEGM+RP
Sbjct: 486 VKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARP 545

Query: 241 GVVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKV 300
           GVVK +EEFKLSVYG+NY+EE  G  KVSEAS+KRKA +E A+K+C  YDWADLAD GK+
Sbjct: 546 GVVKAIEEFKLSVYGDNYDEE--GDVKVSEASRKRKAATENAAKECANYDWADLADKGKL 590

[Close]

BLAST of Cla010749 vs. TrEMBL
Match: V4VRF5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019318mg PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.4e-05
Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 1


Query: 287 DWADLADNGKVKQLHLFFPISVLFSSLQEGGELGGS--LHPRQVGGANAPFLCFSHDM-- 346
           D   +A  G VK +  F  +SV   +  E G++  S     R+    NA   C ++D   
Sbjct: 522 DEEGMARPGVVKAIEEF-KLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWAD 581

Query: 347 ------LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
                 LKE++V ELK YL AH+L  +G+KE LISRIL+HMGK
Sbjct: 582 LADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623

HSP 2 Score: 423.7 bits (1088), Expect = 2.4e-115
Identity = 214/304 (70.39%), Postives = 249/304 (81.91%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++TERSFICADTGAL ++P+KRF  YKN+ +KF+ EELSE+K +S GHLRLLGFKPLSCL
Sbjct: 304 LKTERSFICADTGAL-VQPTKRFHPYKNKNVKFTTEELSEVKRISTGHLRLLGFKPLSCL 363

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STF++P+D+E+ GSTCIFIALHRSM++L RF                AVAF 
Sbjct: 364 KDYHNLRPSTFVFPTDKEVVGSTCIFIALHRSMLRLKRF----------------AVAFY 423

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH---LHPDPDI-APRATDD 180
           G  + PQLVALVAQDEII  G QVEPPGM+M+YLPY+DDIRH   LH D  +  PRATDD
Sbjct: 424 GGSAHPQLVALVAQDEIIAGGVQVEPPGMHMIYLPYSDDIRHIEELHSDITVPTPRATDD 483

Query: 181 QVKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSR 240
           Q+KKA ALM+RIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPE+ DET+PDEEGM+R
Sbjct: 484 QIKKATALMRRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEIKDETLPDEEGMAR 543

Query: 241 PGVVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGK 300
           PGVV  LEEFK SVYGENY EE+ G GK S+ASKKRKA++E A K+  +YDWADLADNG+
Sbjct: 544 PGVVNALEEFKKSVYGENYNEEDEGHGKASDASKKRKAVAENAVKESAKYDWADLADNGR 590

[Close]

BLAST of Cla010749 vs. TrEMBL
Match: D7U9N4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01170 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 1


Query: 343 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
           LK+L+ VELKYYLTAH+L V GKKE LISRIL+HMGK
Sbjct: 587 LKDLTTVELKYYLTAHNLAVGGKKEVLISRILTHMGK 623

HSP 2 Score: 417.2 bits (1071), Expect = 2.2e-113
Identity = 216/305 (70.82%), Postives = 248/305 (81.31%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++TERSFICADTGAL  EP+KR+Q YKN  I  S EELSEIK VS GHL LLGFKPLSCL
Sbjct: 306 LKTERSFICADTGALMQEPAKRYQPYKNDNIMLSVEELSEIKRVSMGHLHLLGFKPLSCL 365

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STF++PSD+E+ GSTCIFIAL RSMV L RF                AVAF 
Sbjct: 366 KDYHNLRPSTFIFPSDKEVIGSTCIFIALLRSMVNLKRF----------------AVAFY 425

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH---LHPDPDI-APRATDD 180
           GS SRPQLVALVAQDEII+AGGQVEPPGM+M+YLPY+DD+RH   +H D +  APRATD+
Sbjct: 426 GSSSRPQLVALVAQDEIISAGGQVEPPGMHMIYLPYSDDVRHVEEIHSDTNAGAPRATDE 485

Query: 181 QVKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSR 240
           Q+KKAAAL+KRIDLKDFSV QFANP LQRHYAVLQALAL+ED+MPE+NDET+PDEEGM+R
Sbjct: 486 QIKKAAALIKRIDLKDFSVFQFANPGLQRHYAVLQALALDEDDMPEINDETLPDEEGMAR 545

Query: 241 PGVVKTLEEFKLSVYGENYEEE-EAGKGKVSEASKKRKAISETASKKCKEYDWADLADNG 300
           PGVVK +EEFKLSVYGENY+EE + G GK S+ASKKRK   E A+K+   Y+W DLADNG
Sbjct: 546 PGVVKAVEEFKLSVYGENYDEESDMGNGKASDASKKRKTAVENAAKESANYNWPDLADNG 594

[Close]

BLAST of Cla010749 vs. TrEMBL
Match: Q0KJ40_POPNI (Ku70 homolog OS=Populus nigra GN=PnKu70 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.7e-07
Identity = 29/37 (78.38%), Postives = 35/37 (94.59%), Query Frame = 1


Query: 343 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
           LK+L+V ELKYYLTAH+LPV+GKKE LISRIL+H+GK
Sbjct: 591 LKDLTVTELKYYLTAHNLPVTGKKEVLISRILTHLGK 627

HSP 2 Score: 412.1 bits (1058), Expect = 7.1e-112
Identity = 214/306 (69.93%), Postives = 247/306 (80.72%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++TERSFICADTGAL  EP+KR+Q YKN  I  S EELSEIK VS GHL LLGFKPLSCL
Sbjct: 306 LKTERSFICADTGALMQEPAKRYQPYKNDNIMLSVEELSEIKRVSTGHLHLLGFKPLSCL 365

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STF++PSD+E+ GSTCIFIAL RSMV L RF                AVAF 
Sbjct: 366 KDYHNLRPSTFIFPSDKEVIGSTCIFIALLRSMVNLKRF----------------AVAFY 425

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADD----IRHLHPDPDI-APRATD 180
           GS SRPQLVALVAQDEII+AGGQVEPPGM+M+YLPY+DD    +  +H D +  APRATD
Sbjct: 426 GSSSRPQLVALVAQDEIISAGGQVEPPGMHMIYLPYSDDGMVDLLQIHSDTNAGAPRATD 485

Query: 181 DQVKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMS 240
           +Q+KKAAAL+KRIDLKDFSV QFANP LQRHYAVLQALAL+ED+MPE+NDET+PDEEGM+
Sbjct: 486 EQIKKAAALIKRIDLKDFSVFQFANPGLQRHYAVLQALALDEDDMPEINDETLPDEEGMA 545

Query: 241 RPGVVKTLEEFKLSVYGENYEEE-EAGKGKVSEASKKRKAISETASKKCKEYDWADLADN 300
           RPGVVK +EEFKLSVYGENY+EE + G GK S+ASKKRK  +E A+K+   Y+W DLADN
Sbjct: 546 RPGVVKAVEEFKLSVYGENYDEESDMGSGKASDASKKRKTAAENAAKESANYNWPDLADN 595

[Close]

BLAST of Cla010749 vs. NCBI nr
Match: gi|449468754|ref|XP_004152086.1| (PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Cucumis sativus])

HSP 1 Score: 526.2 bits (1354), Expect = 4.8e-146
Identity = 269/303 (88.78%), Postives = 277/303 (91.42%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++TERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIK VSAGHL+LLGFKPLSCL
Sbjct: 306 LKTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKRVSAGHLQLLGFKPLSCL 365

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STFLYPSDE M GSTCIFIALHRSMVKLNRF                AVAF 
Sbjct: 366 KDYHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRF----------------AVAFF 425

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH---LHPDPDIAPRATDDQ 180
           GSPSRPQLVALVAQDEIITA GQVEPPGMNMLYLPYADDIRH   LHP+PDIAPRATDDQ
Sbjct: 426 GSPSRPQLVALVAQDEIITAAGQVEPPGMNMLYLPYADDIRHVEELHPNPDIAPRATDDQ 485

Query: 181 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRP 240
           VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGM+RP
Sbjct: 486 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARP 545

Query: 241 GVVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKV 300
           GVVKTLEEFKLSVYGENYEEEEAGKGKVSE SKKRKAISETAS+KCKEYDWADLADNGK+
Sbjct: 546 GVVKTLEEFKLSVYGENYEEEEAGKGKVSEVSKKRKAISETASQKCKEYDWADLADNGKL 592

[Close]

BLAST of Cla010749 vs. NCBI nr
Match: gi|449468754|ref|XP_004152086.1| (PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 3.9e-10
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 1


Query: 343 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
           LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK
Sbjct: 589 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 625

HSP 2 Score: 525.0 bits (1351), Expect = 1.1e-145
Identity = 269/301 (89.37%), Postives = 275/301 (91.36%), Query Frame = 1


Query: 3   TERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCLKD 62
           TERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIK VSAGHL+LLGFKPLSCLKD
Sbjct: 232 TERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKRVSAGHLQLLGFKPLSCLKD 291

Query: 63  YHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFLGS 122
           YHNLR STFLYPSDE M GSTCIFIALHRSMVKLNRF                AVAF GS
Sbjct: 292 YHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRF----------------AVAFFGS 351

Query: 123 PSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH---LHPDPDIAPRATDDQVK 182
           PSRPQLVALVAQDEIITA GQVEPPGMNMLYLPYADDIRH   LHP+PDIAPRATDDQVK
Sbjct: 352 PSRPQLVALVAQDEIITAAGQVEPPGMNMLYLPYADDIRHVEELHPNPDIAPRATDDQVK 411

Query: 183 KAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRPGV 242
           KAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGM+RPGV
Sbjct: 412 KAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGV 471

Query: 243 VKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKVKQ 301
           VKTLEEFKLSVYGENYEEEEAGKGKVSE SKKRKAISETAS+KCKEYDWADLADNGK+K+
Sbjct: 472 VKTLEEFKLSVYGENYEEEEAGKGKVSEVSKKRKAISETASQKCKEYDWADLADNGKLKE 516

[Close]

BLAST of Cla010749 vs. NCBI nr
Match: gi|700197964|gb|KGN53122.1| (hypothetical protein Csa_4G017100 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 3.9e-10
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 1


Query: 343 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
           LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK
Sbjct: 513 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 549

HSP 2 Score: 519.6 bits (1337), Expect = 4.5e-144
Identity = 268/304 (88.16%), Postives = 276/304 (90.79%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++TERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIK VSAGHL+LLGFKPLSCL
Sbjct: 306 LKTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKRVSAGHLQLLGFKPLSCL 365

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STFLYPSDE M GSTCIFIALHRSMVKLNRF                AVAF 
Sbjct: 366 KDYHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRF----------------AVAFF 425

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH---LHPDPDIAPRATDDQ 180
           GSPS PQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRH   LHP+PDIAPRATDDQ
Sbjct: 426 GSPSHPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIRHVEELHPNPDIAPRATDDQ 485

Query: 181 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRP 240
           VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGM+RP
Sbjct: 486 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARP 545

Query: 241 GVVKTLEEFKLSVYGENY-EEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGK 300
           GVVKTLEEFKLSVYGENY EEEEAGKGKVSE SKKRKAISE AS+KCKEYDWADLADNGK
Sbjct: 546 GVVKTLEEFKLSVYGENYEEEEEAGKGKVSEVSKKRKAISEIASQKCKEYDWADLADNGK 593

[Close]

BLAST of Cla010749 vs. NCBI nr
Match: gi|659107941|ref|XP_008453932.1| (PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Cucumis melo])

HSP 1 Score: 72.0 bits (175), Expect = 2.5e-09
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1


Query: 343 LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
           LKELSVVELKYYLTA+DLPVSGKKEALISRILSHMGK
Sbjct: 590 LKELSVVELKYYLTANDLPVSGKKEALISRILSHMGK 626

HSP 2 Score: 433.0 bits (1112), Expect = 5.6e-118
Identity = 220/303 (72.61%), Postives = 253/303 (83.50%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++TERSFICADTGAL  EP+KRFQ YK + IKFS +ELSEIK VS GHLRL GFKPLS L
Sbjct: 306 LKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STF++PSD+E+ GSTCIFIALHRSM++LNRF                AVAF 
Sbjct: 366 KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF----------------AVAFY 425

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIR---HLHPDPDIAPRATDDQ 180
           G+PS P+LVALVAQDEI+ AGGQVEPPGM+M+YLPY+DDIR    LH D D  PRA+DD+
Sbjct: 426 GNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE 485

Query: 181 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRP 240
           VKKAAALMKRIDLKDFSVCQFANP+LQRHYAVLQALALEED+MPE+ DETVPDEEGM+RP
Sbjct: 486 VKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARP 545

Query: 241 GVVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKV 300
           GVVK +EEFKLSVYG+NY+EE  G  KVSEAS+KRKA +E A+K+C  YDWADLAD GK+
Sbjct: 546 GVVKAVEEFKLSVYGDNYDEE--GDVKVSEASRKRKAATENAAKECANYDWADLADKGKL 590

[Close]

BLAST of Cla010749 vs. NCBI nr
Match: gi|568848070|ref|XP_006477846.1| (PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Citrus sinensis])

HSP 1 Score: 57.0 bits (136), Expect = 8.3e-05
Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 1


Query: 287 DWADLADNGKVKQLHLFFPISVLFSSLQEGGELGGS--LHPRQVGGANAPFLCFSHDM-- 346
           D   +A  G VK +  F  +SV   +  E G++  S     R+    NA   C ++D   
Sbjct: 522 DEEGMARPGVVKAVEEF-KLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWAD 581

Query: 347 ------LKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 380
                 LKE++V ELK YL AH+L  +G+KE LISRIL+HMGK
Sbjct: 582 LADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623

HSP 2 Score: 429.1 bits (1102), Expect = 8.0e-117
Identity = 218/303 (71.95%), Postives = 251/303 (82.84%), Query Frame = 1


Query: 1   MQTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKGVSAGHLRLLGFKPLSCL 60
           ++TERSFICADTGAL  EP+KRFQ YK + IKFS +ELSEIK VS GHLRL GFKPLS L
Sbjct: 306 LKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365

Query: 61  KDYHNLRSSTFLYPSDEEMGGSTCIFIALHRSMVKLNRFLIDVVLCNDPLFLPSFAVAFL 120
           KDYHNLR STF++PSD+E+ GSTC FIALHRSM++L RF                AVAF 
Sbjct: 366 KDYHNLRPSTFVFPSDKEVVGSTCTFIALHRSMLRLKRF----------------AVAFY 425

Query: 121 GSPSRPQLVALVAQDEIITAGGQVEPPGMNMLYLPYADDIR---HLHPDPDIAPRATDDQ 180
           G+PS P+LVALVAQDEI+ AGGQVEPPGM+M+YLPY+DDIR    LH D D  PRA+DD+
Sbjct: 426 GNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE 485

Query: 181 VKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMSRP 240
           VKKAAALMKRIDLKDFSVCQFANP+LQRHYAVLQALALEED+MPE+ DETVPDEEGM+RP
Sbjct: 486 VKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARP 545

Query: 241 GVVKTLEEFKLSVYGENYEEEEAGKGKVSEASKKRKAISETASKKCKEYDWADLADNGKV 300
           GVVK +EEFKLSVYG+NY+EE  G  KVSEAS+KRKA +E A+K+C  YDWADLAD GK+
Sbjct: 546 GVVKAIEEFKLSVYGDNYDEE--GDVKVSEASRKRKAATENAAKECANYDWADLADKGKL 590

The following BLAST results are available for this feature:

BLAST of Cla010749 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KU70_ORYSJ	2.5e-102	59.87	ATP-dependent DNA helicase 2 subunit KU70 OS=Oryza sativa subsp. japonica GN=KU7...	[more]
KU70_ARATH	5.1e-95	60.53	ATP-dependent DNA helicase 2 subunit KU70 OS=Arabidopsis thaliana GN=KU70 PE=1 S...	[more]
XRCC6_CHICK	1.3e-29	33.57	X-ray repair cross-complementing protein 5 OS=Gallus gallus GN=XRCC6 PE=2 SV=1	[more]
KU70_ASPSO	5.5e-25	27.81	ATP-dependent DNA helicase II subunit 1 OS=Aspergillus sojae GN=ku70 PE=3 SV=1	[more]
XRCC6_HUMAN	9.4e-25	32.76	X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2	[more]

BLAST of Cla010749 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXI0_CUCSA	7.5e-146	89.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017100 PE=4 SV=1	[more]
A0A0A0KXI0_CUCSA	2.7e-10	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017100 PE=4 SV=1	[more]
V4VRF5_9ROSI	4.4e-05	39.81	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019318mg PE=4 SV=1	[more]
D7U9N4_VITVI	2.4e-06	78.38	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01170 PE=4 SV=...	[more]
Q0KJ40_POPNI	4.7e-07	78.38	Ku70 homolog OS=Populus nigra GN=PnKu70 PE=2 SV=1	[more]

BLAST of Cla010749 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468754\|ref\|XP_004152086.1\|	4.8e-146	88.78	PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Cucumis sativus]	[more]
gi\|449468754\|ref\|XP_004152086.1\|	3.9e-10	100.00	PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Cucumis sativus]	[more]
gi\|700197964\|gb\|KGN53122.1\|	3.9e-10	100.00	hypothetical protein Csa_4G017100 [Cucumis sativus]	[more]
gi\|659107941\|ref\|XP_008453932.1\|	2.5e-09	97.30	PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Cucumis melo]	[more]
gi\|568848070\|ref\|XP_006477846.1\|	8.3e-05	39.81	PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003034	SAP_dom
IPR005160	Ku_C
IPR006164	Ku70/Ku80_beta-barrel_dom
IPR006165	Ku70
IPR016194	SPOC-like_C_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0004003	ATP-dependent DNA helicase activity
GO:0003684	damaged DNA binding
GO:0042162	telomeric DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006303	double-strand break repair via nonhomologous end joining
GO:0000723	telomere maintenance

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0043564	Ku70:Ku80 complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0000723	telomere maintenance
cellular_component	GO:0043564	Ku70:Ku80 complex
cellular_component	GO:0005657	replication fork
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004003	ATP-dependent DNA helicase activity
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0042162	telomeric DNA binding
molecular_function	GO:0003677	DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU79690	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla010749	Cla010749.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU79690	WMU79690	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003034	SAP domain	GENE3D	G3DSA:1.10.720.30		coord: 343..377 score: 2.
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 343..376 score: 3.
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 343..377 score: 7.
IPR003034	SAP domain	PROFILE	PS50800	SAP	coord: 343..377 score: 9
IPR005160	Ku70/Ku80 C-terminal arm	GENE3D	G3DSA:1.10.1600.10		coord: 157..253 score: 1.5
IPR005160	Ku70/Ku80 C-terminal arm	PFAM	PF03730	Ku_C	coord: 192..284 score: 1.3
IPR006164	Ku70/Ku80 beta-barrel domain	PFAM	PF02735	Ku	coord: 122..179 score: 2.7E-7coord: 2..101 score: 5.5
IPR006164	Ku70/Ku80 beta-barrel domain	SMART	SM00559	ku_4	coord: 12..172 score: 4.8
IPR006165	Ku70	PANTHER	PTHR12604:SF2	X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 6	coord: 1..99 score: 3.0E-93coord: 332..379 score: 3.0E-93coord: 116..281 score: 3.0
IPR016194	SPOC-like, C-terminal domain	GENE3D	G3DSA:2.40.290.10		coord: 21..156 score: 4.5
IPR016194	SPOC-like, C-terminal domain	unknown	SSF100939	SPOC domain-like	coord: 3..252 score: 3.53
None	No IPR available	PANTHER	PTHR12604	KU AUTOANTIGEN DNA HELICASE	coord: 1..99 score: 3.0E-93coord: 116..281 score: 3.0E-93coord: 332..379 score: 3.0
None	No IPR available	unknown	SSF68906	SAP domain	coord: 339..377 score: 2.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla010749	MELO3C017679	Melon (DHL92) v3.5.1	mewmB506

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla010749	Cucurbita maxima (Rimu)	cmawmB237
Cla010749	Cucurbita maxima (Rimu)	cmawmB795
Cla010749	Cucurbita moschata (Rifu)	cmowmB224
Cla010749	Cucurbita moschata (Rifu)	cmowmB789
Cla010749	Watermelon (Charleston Gray)	wcgwmB372
Cla010749	Cucumber (Chinese Long) v2	cuwmB312
Cla010749	Cucurbita pepo (Zucchini)	cpewmB606
Cla010749	Cucurbita pepo (Zucchini)	cpewmB842
Cla010749	Bottle gourd (USVL1VR-Ls)	lsiwmB441
Cla010749	Cucumber (Gy14) v2	cgybwmB290
Cla010749	Melon (DHL92) v3.6.1	medwmB493
Cla010749	Silver-seed gourd	carwmB0691
Cla010749	Silver-seed gourd	carwmB0183
Cla010749	Cucumber (Chinese Long) v3	cucwmB324
Cla010749	Watermelon (97103) v2	wmwmbB174
Cla010749	Wax gourd	wgowmB176
Cla010749	Cucumber (Gy14) v1	cgywmB117