Cla010679 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla010679
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Hydrolase-like protein (AHRD V1 ***- Q7XI46_ORYSJ)
Location	Chr7 : 28802732 .. 28803061 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTTGTTTTAGTTTCTCTTCCACCATGGATTCCTGCTTCCGCTACTCCTTTTCTAGGGCAGGACTCAAATCCATCACCACCGATCTTGGCGATGGAACCATCGTCCACTGTTGGGCGCCCAAATTCAGAAGAGACACCAAACCTAATTTGCTTCTCCTCCATGGATTTGGAGCCAACGCAATGTGGCAATGGAACGAATTCATATCGCCGTTGATTCGATTCTTCAATGTCTACGTTCCCGACCTAATTTTCTTCGGCAATTCCTACANNNNTCCTACACGACTCGCCCAGAGAGGTCCGAGTCCTTTCAGGCTCGCTGTATGA

mRNA sequence

ATGGCAACTTGTTTTAGTTTCTCTTCCACCATGGATTCCTGCTTCCGCTACTCCTTTTCTAGGGCAGGACTCAAATCCATCACCACCGATCTTGGCGATGGAACCATCGTCCACTGTTGGGCGCCCAAATTCAGAAGAGACACCAAACCTAATTTGCTTCTCCTCCATGGATTTGGAGCCAACGCAATGTGGCAATGGAACGAATTCATATCGCCGTTGATTCGATTCTTCAATGTCTACGTTCCCGACCTAATTTTCTTCGGCAATTCCTACANNNNTCCTACACGACTCGCCCAGAGAGGTCCGAGTCCTTTCAGGCTCGCTGTATGA

Coding sequence (CDS)

ATGGCAACTTGTTTTAGTTTCTCTTCCACCATGGATTCCTGCTTCCGCTACTCCTTTTCTAGGGCAGGACTCAAATCCATCACCACCGATCTTGGCGATGGAACCATCGTCCACTGTTGGGCGCCCAAATTCAGAAGAGACACCAAACCTAATTTGCTTCTCCTCCATGGATTTGGAGCCAACGCAATGTGGCAATGGAACGAATTCATATCGCCGTTGATTCGATTCTTCAATGTCTACGTTCCCGACCTAATTTTCTTCGGCAATTCCTACANNNNTCCTACACGACTCGCCCAGAGAGGTCCGAGTCCTTTCAGGCTCGCTGTATGA

Protein sequence

MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGANAMWQWNEFISPLIRFFNVYVPDLIFFGNSYXXPTRLAQRGPSPFRLAV

Homology

[Close]

BLAST of Cla010679 vs. TrEMBL
Match: A0A0A0KWE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G026270 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-46
Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 1


Query: 1  MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGA 60
          MA CFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTI+HCWAPKFRR+TKPNLLLLHGFGA
Sbjct: 1  MAACFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIIHCWAPKFRRETKPNLLLLHGFGA 60

Query: 61 NAMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          NAMWQWNEFI+PLIRFFNVYVPDLIFFGNSY
Sbjct: 61 NAMWQWNEFIAPLIRFFNVYVPDLIFFGNSY 91

[Close]

BLAST of Cla010679 vs. TrEMBL
Match: A0A0R0K3T3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G177400 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-36
Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = 1


Query: 2  ATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGAN 61
          A C SF++T D CFR+SFS AGLKS+TTDLGDGTI+HCWAPK  +D+KPNLLL+HGFGAN
Sbjct: 3  AGCISFTATRDRCFRFSFSNAGLKSVTTDLGDGTIMHCWAPKAHKDSKPNLLLIHGFGAN 62

Query: 62 AMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          AMWQWN+F+SPL R FNVYVPDL+FFG+S+
Sbjct: 63 AMWQWNDFLSPLTRRFNVYVPDLLFFGDSH 92

[Close]

BLAST of Cla010679 vs. TrEMBL
Match: A0A151S3C5_CAJCA (Monoacylglycerol lipase ABHD6 OS=Cajanus cajan GN=KK1_029006 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-35
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 1


Query: 1  MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGA 60
          MA CFSF++T D+CFRYSFS AGLKS TTDLGDG+I+H WAPK   D+KP LLLLHG GA
Sbjct: 1  MAGCFSFTATRDTCFRYSFSNAGLKSTTTDLGDGSIIHSWAPKAHNDSKPTLLLLHGIGA 60

Query: 61 NAMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          NAMWQWN+F+SPL R FNVYVPDL+FFG+SY
Sbjct: 61 NAMWQWNDFVSPLTRRFNVYVPDLLFFGDSY 91

[Close]

BLAST of Cla010679 vs. TrEMBL
Match: A0A0L9TJS4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g028000 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 1


Query: 1  MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGA 60
          MA C SF++T D CFR+SFS AGLKS TTDLG GTI+HCW PK  +D+KPNLLLLHGFGA
Sbjct: 1  MAGCISFTATRDRCFRFSFSSAGLKSATTDLGQGTIMHCWVPKAHKDSKPNLLLLHGFGA 60

Query: 61 NAMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          NAMWQWN+F+ PL R FNVYVPDL+FFG+S+
Sbjct: 61 NAMWQWNDFLPPLTRRFNVYVPDLLFFGDSH 91

[Close]

BLAST of Cla010679 vs. TrEMBL
Match: A0A0S3QYH4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G087900 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 1


Query: 1  MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGA 60
          MA C SF++T D CFR+SFS AGLKS TTDLG GTI+HCW PK  +D+KPNLLLLHGFGA
Sbjct: 1  MAGCISFTATRDRCFRFSFSSAGLKSATTDLGQGTIMHCWVPKAHKDSKPNLLLLHGFGA 60

Query: 61 NAMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          NAMWQWN+F+ PL R FNVYVPDL+FFG+S+
Sbjct: 61 NAMWQWNDFLPPLTRRFNVYVPDLLFFGDSH 91

[Close]

BLAST of Cla010679 vs. NCBI nr
Match: gi|449458293|ref|XP_004146882.1| (PREDICTED: monoacylglycerol lipase ABHD6 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-46
Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 1


Query: 1  MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGA 60
          MA CFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTI+HCWAPKFRR+TKPNLLLLHGFGA
Sbjct: 1  MAACFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIIHCWAPKFRRETKPNLLLLHGFGA 60

Query: 61 NAMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          NAMWQWNEFI+PLIRFFNVYVPDLIFFGNSY
Sbjct: 61 NAMWQWNEFIAPLIRFFNVYVPDLIFFGNSY 91

[Close]

BLAST of Cla010679 vs. NCBI nr
Match: gi|659107717|ref|XP_008453821.1| (PREDICTED: uncharacterized protein LOC103494432 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-46
Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 1


Query: 1  MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGA 60
          MA CFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTI+HCWAPKFRR+TKPNLLLLHGFGA
Sbjct: 1  MAACFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIIHCWAPKFRRETKPNLLLLHGFGA 60

Query: 61 NAMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          NAMWQWNEFI+PLIRFFNVYVPDLIFFGNSY
Sbjct: 61 NAMWQWNEFIAPLIRFFNVYVPDLIFFGNSY 91

[Close]

BLAST of Cla010679 vs. NCBI nr
Match: gi|356511085|ref|XP_003524260.1| (PREDICTED: monoacylglycerol lipase ABHD6 [Glycine max])

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-36
Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = 1


Query: 2  ATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGAN 61
          A C SF++T D CFR+SFS AGLKS+TTDLGDGTI+HCWAPK  +D+KPNLLL+HGFGAN
Sbjct: 3  AGCISFTATRDRCFRFSFSNAGLKSVTTDLGDGTIMHCWAPKAHKDSKPNLLLIHGFGAN 62

Query: 62 AMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          AMWQWN+F+SPL R FNVYVPDL+FFG+S+
Sbjct: 63 AMWQWNDFLSPLTRRFNVYVPDLLFFGDSH 92

[Close]

BLAST of Cla010679 vs. NCBI nr
Match: gi|1012338006|gb|KYP49268.1| (Monoacylglycerol lipase ABHD6 [Cajanus cajan])

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-35
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 1


Query: 1  MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGA 60
          MA CFSF++T D+CFRYSFS AGLKS TTDLGDG+I+H WAPK   D+KP LLLLHG GA
Sbjct: 1  MAGCFSFTATRDTCFRYSFSNAGLKSTTTDLGDGSIIHSWAPKAHNDSKPTLLLLHGIGA 60

Query: 61 NAMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          NAMWQWN+F+SPL R FNVYVPDL+FFG+SY
Sbjct: 61 NAMWQWNDFVSPLTRRFNVYVPDLLFFGDSY 91

[Close]

BLAST of Cla010679 vs. NCBI nr
Match: gi|951002770|ref|XP_014507429.1| (PREDICTED: monoacylglycerol lipase ABHD6 [Vigna radiata var. radiata])

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-35
Identity = 68/91 (74.73%), Postives = 79/91 (86.81%), Query Frame = 1


Query: 1  MATCFSFSSTMDSCFRYSFSRAGLKSITTDLGDGTIVHCWAPKFRRDTKPNLLLLHGFGA 60
          MA C SF++T D CFR+SFS AGLKS TTDLG GTI+HCWAPK  +D+KPNLLLLHGFGA
Sbjct: 1  MAGCISFTATRDRCFRFSFSNAGLKSATTDLGQGTIMHCWAPKAHKDSKPNLLLLHGFGA 60

Query: 61 NAMWQWNEFISPLIRFFNVYVPDLIFFGNSY 92
          NAMWQWN+F+ PL R FNVYVPDL+FFG+S+
Sbjct: 61 NAMWQWNDFLPPLTRRFNVYVPDLLFFGDSH 91

The following BLAST results are available for this feature:

BLAST of Cla010679 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWE2_CUCSA	1.9e-46	95.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G026270 PE=4 SV=1	[more]
A0A0R0K3T3_SOYBN	3.1e-36	75.56	Uncharacterized protein OS=Glycine max GN=GLYMA_05G177400 PE=4 SV=1	[more]
A0A151S3C5_CAJCA	1.2e-35	75.82	Monoacylglycerol lipase ABHD6 OS=Cajanus cajan GN=KK1_029006 PE=4 SV=1	[more]
A0A0L9TJS4_PHAAN	1.0e-34	73.63	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g028000 PE=4 SV=1	[more]
A0A0S3QYH4_PHAAN	1.0e-34	73.63	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G087900 PE=...	[more]

BLAST of Cla010679 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458293\|ref\|XP_004146882.1\|	2.8e-46	95.60	PREDICTED: monoacylglycerol lipase ABHD6 [Cucumis sativus]	[more]
gi\|659107717\|ref\|XP_008453821.1\|	2.8e-46	95.60	PREDICTED: uncharacterized protein LOC103494432 [Cucumis melo]	[more]
gi\|356511085\|ref\|XP_003524260.1\|	4.5e-36	75.56	PREDICTED: monoacylglycerol lipase ABHD6 [Glycine max]	[more]
gi\|1012338006\|gb\|KYP49268.1\|	1.7e-35	75.82	Monoacylglycerol lipase ABHD6 [Cajanus cajan]	[more]
gi\|951002770\|ref\|XP_014507429.1\|	3.8e-35	74.73	PREDICTED: monoacylglycerol lipase ABHD6 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0047372	acylglycerol lipase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla010679	Cla010679.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10992	ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN	coord: 15..90 score: 5.3
None	No IPR available	PANTHER	PTHR10992:SF792	SUBFAMILY NOT NAMED	coord: 15..90 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla010679	Cla97C07G144350	Watermelon (97103) v2	wmwmbB174
Cla010679	Csa4G026270	Cucumber (Chinese Long) v2	cuwmB312
Cla010679	MELO3C017612	Melon (DHL92) v3.5.1	mewmB506
Cla010679	ClCG07G017330	Watermelon (Charleston Gray)	wcgwmB372
Cla010679	CSPI04G04430	Wild cucumber (PI 183967)	cpiwmB315
Cla010679	Cucsa.093800	Cucumber (Gy14) v1	cgywmB117
Cla010679	CmaCh16G007060	Cucurbita maxima (Rimu)	cmawmB312
Cla010679	CmaCh04G008200	Cucurbita maxima (Rimu)	cmawmB689
Cla010679	CmoCh16G007630	Cucurbita moschata (Rifu)	cmowmB306
Cla010679	CmoCh04G008770	Cucurbita moschata (Rifu)	cmowmB682
Cla010679	Lsi07G001500	Bottle gourd (USVL1VR-Ls)	lsiwmB441
Cla010679	Cp4.1LG14g01230	Cucurbita pepo (Zucchini)	cpewmB223
Cla010679	Cp4.1LG01g09240	Cucurbita pepo (Zucchini)	cpewmB415
Cla010679	CsGy4G004340	Cucumber (Gy14) v2	cgybwmB290
Cla010679	MELO3C017612.2	Melon (DHL92) v3.6.1	medwmB493
Cla010679	Carg14220	Silver-seed gourd	carwmB0941
Cla010679	Carg05820	Silver-seed gourd	carwmB1019
Cla010679	CsaV3_4G004530	Cucumber (Chinese Long) v3	cucwmB324
Cla010679	Bhi01G001963	Wax gourd	wgowmB176

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla010679	Cucurbita maxima (Rimu)	cmawmB313
Cla010679	Cucurbita maxima (Rimu)	cmawmB693
Cla010679	Cucurbita moschata (Rifu)	cmowmB307
Cla010679	Cucurbita pepo (Zucchini)	cpewmB224
Cla010679	Cucurbita pepo (Zucchini)	cpewmB421
Cla010679	Silver-seed gourd	carwmB0369
Cla010679	Silver-seed gourd	carwmB0873