Cla010625 (gene) Watermelon (97103) v1

Overview
NameCla010625
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPlant cell wall protein SlTFR88 (AHRD V1 *-*- Q19QU4_SOLLC); contains Interpro domain(s) IPR010847 Harpin-induced 1
LocationChr6 : 11745954 .. 11747827 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTCCAGTTCCAGGGACGATTCGGTCCCTCTGCCCTACACTCTTCTTCCCCAAAATGCTGCACAGCAAAACGTCGTCGTTTTATCCCTCTACCGTCCCCCTTCATGCCGACATCGGCGACTTCTCCGACTCTGTGCCCTCTACTCCGCCGCCTTCTTCCTCCTCTTCGCCGTTGCTTTTCTACTTTTCCCCTCCGATCCTTCGCTCCAACTCGTCCGATTAAAACTCAATCGCGTCAAAGTCCATTTGTTGCCTGTTGTCGCGCTTGACCTTTCTTTCTCTGCTTCTCTTAGGGTTCGCAATAAGAACTTCTTCTCTCTCGATTACGATTACATTGGCGTTTCGGTCGGCTACCGGGGAAGACGACTTGGATTTGTGAGCTCTGAGGGCGGTCGAGTTTCTGCTCGAGGCTCTTCTTATGTGAATGCCACTCTCGATTTGAATGGGTTAGAAGTTGTTCACGATGTCTTTTACTTGCTTGCGGATCTGGGGAAGGGTATCATTCCCTTCGATACGGAGACGGAAGTGGAAGGATCCGTGGGGATTTTCTTAATCAAATTCCCGATTAAGGTAATATTGATTTTGATTCTGTTTCCGACCATAAATCAAATCTTTACTTGGAATTGTAAATTGCTTCGATGTTGATTTGTTTTGTTTCTTTGATTAGTTGGCAATCATTGAATGGATGAACAGTAGTAAGACTCCATTTCTTTGCAAACAGCACGATTTAAATAATGCTTATTCTGCTGTGGCGACTATTACACGTTTCTTAGTGTAGAAGTTCAGATAATTGGAATAAGACATTCAACTTTGTAATTGACTCTTTGGATGTCCAGTATTGAACCCATTTCTTGGTCCTGCAAGCTGCAGCACTCCTTAAATCATTGCCAAATGCTTAGGCCCCATTTGATTACTTTTGGTCTTTGACCATTTTGTTTCTTTTCTCACAATTTCTTTAACATGGATTTTCAAAACATAACAAAGCAAAGAAACTAATAAACTAAAAATCAAATCATCTTTGGCTTCTTCACCTCTGTGCCCTCTACTGGCCCATTTTGTGCTATGATGTTGATAGGGAAAATGGTTGAAGACGATTAACCTTCTTATTCTGAACTTGAACCCTGCCGTTGATTTGATTATTGCCTGCCGATTCGTACATTAAATATAATTATAACCATGTCGTCTTAGGCTATTGGAATGTGTAGATCTCAAATGCTTTTCTTGTGGAATGTGTCATCCGAGTTAAAAGAACATCCCTATTCTATCCTTCACTGCCTTCTTTCCCCAACTTGACTATTCAGCTAAATAAATAGTCTAAGCTATTCTCGAGGGTTTGCTATTATTGTAATTATAATGTTGTGTTACGCTACTGTGGTTCTTGTATAAATGTCAAATAGTGGAATGTGTCATTTGAATTCAAAGAAGTCTGTCTTCCTCATCCTCACCCGACCCTCCTGTCATTCTGTGGCCTCTTTCACCAACTTAACTATTCAGCACAAATAATTCTAATTTAGTGTGTGTTCTGTTCTTTTAATGGTGTTTCTTAATGCTCGTCAGGCAAGAGTGTCATGTGAGGTACTTGTGAATACAAATAACCAAACAATTGAACATCAAGATTGCTACCCTGAGGTGAGAATTCATCACGTTGCTCACTTTTCTGTTGATATTTCTGCCAAAGTTTCAACCTCACAACCCCTTGGATCTTTCTTCTTGTATTTGCAGTGAAGGGAAGATGGAAATTGGGTTTTGATTATTACTTTCGTGACATGAAGCTGAAACTGGGAAGTGGGAACTCCCCTGATCTTGCTGAATATGACTGTAAATATCACTCGCAGAAAGTTAGTGTTCATTGTGGTATGCTAGGGATTTGA

mRNA sequence

ATGACCTCCAGTTCCAGGGACGATTCGGTCCCTCTGCCCTACACTCTTCTTCCCCAAAATGCTGCACAGCAAAACGTCGTCGTTTTATCCCTCTACCGTCCCCCTTCATGCCGACATCGGCGACTTCTCCGACTCTGTGCCCTCTACTCCGCCGCCTTCTTCCTCCTCTTCGCCGTTGCTTTTCTACTTTTCCCCTCCGATCCTTCGCTCCAACTCGTCCGATTAAAACTCAATCGCGTCAAAGTCCATTTGTTGCCTGTTGTCGCGCTTGACCTTTCTTTCTCTGCTTCTCTTAGGGTTCGCAATAAGAACTTCTTCTCTCTCGATTACGATTACATTGGCGTTTCGGTCGGCTACCGGGGAAGACGACTTGGATTTGTGAGCTCTGAGGGCGGTCGAGTTTCTGCTCGAGGCTCTTCTTATGTGAATGCCACTCTCGATTTGAATGGGTTAGAAGTTGTTCACGATGTCTTTTACTTGCTTGCGGATCTGGGGAAGGGTATCATTCCCTTCGATACGGAGACGGAAGTGGAAGGATCCGTGGGGATTTTCTTAATCAAATTCCCGATTAAGGCAAGAGTGTCATGTGAGGTACTTGTGAATACAAATAACCAAACAATTGAACATCAAGATTGCTACCCTGAGGGAAGATGGAAATTGGGTTTTGATTATTACTTTCGTGACATGAAGCTGAAACTGGGAAGTGGGAACTCCCCTGATCTTGCTGAATATGACTGTAAATATCACTCGCAGAAAGTTAGTGTTCATTGTGGTATGCTAGGGATTTGA

Coding sequence (CDS)

ATGACCTCCAGTTCCAGGGACGATTCGGTCCCTCTGCCCTACACTCTTCTTCCCCAAAATGCTGCACAGCAAAACGTCGTCGTTTTATCCCTCTACCGTCCCCCTTCATGCCGACATCGGCGACTTCTCCGACTCTGTGCCCTCTACTCCGCCGCCTTCTTCCTCCTCTTCGCCGTTGCTTTTCTACTTTTCCCCTCCGATCCTTCGCTCCAACTCGTCCGATTAAAACTCAATCGCGTCAAAGTCCATTTGTTGCCTGTTGTCGCGCTTGACCTTTCTTTCTCTGCTTCTCTTAGGGTTCGCAATAAGAACTTCTTCTCTCTCGATTACGATTACATTGGCGTTTCGGTCGGCTACCGGGGAAGACGACTTGGATTTGTGAGCTCTGAGGGCGGTCGAGTTTCTGCTCGAGGCTCTTCTTATGTGAATGCCACTCTCGATTTGAATGGGTTAGAAGTTGTTCACGATGTCTTTTACTTGCTTGCGGATCTGGGGAAGGGTATCATTCCCTTCGATACGGAGACGGAAGTGGAAGGATCCGTGGGGATTTTCTTAATCAAATTCCCGATTAAGGCAAGAGTGTCATGTGAGGTACTTGTGAATACAAATAACCAAACAATTGAACATCAAGATTGCTACCCTGAGGGAAGATGGAAATTGGGTTTTGATTATTACTTTCGTGACATGAAGCTGAAACTGGGAAGTGGGAACTCCCCTGATCTTGCTGAATATGACTGTAAATATCACTCGCAGAAAGTTAGTGTTCATTGTGGTATGCTAGGGATTTGA

Protein sequence

MTSSSRDDSVPLPYTLLPQNAAQQNVVVLSLYRPPSCRHRRLLRLCALYSAAFFLLFAVAFLLFPSDPSLQLVRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYRGRRLGFVSSEGGRVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGSVGIFLIKFPIKARVSCEVLVNTNNQTIEHQDCYPEGRWKLGFDYYFRDMKLKLGSGNSPDLAEYDCKYHSQKVSVHCGMLGI
Homology
[Close]
BLAST of Cla010625 vs. TrEMBL
Match: A0A0A0LTV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G369500 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.0e-106
Identity = 194/215 (90.23%), Postives = 206/215 (95.81%), Query Frame = 1 

Query: 1   MTSSSRDDSVPLPYTLLPQNAAQQNVVVLSLYRPPSCRHRRLLRLCALYSAAFFLLFAVA 60
           MTSSS DDSVP+PYTL+P NAAQQNVVVLSLYRPP CRHRRLLRLCA YSAAF LLFAVA
Sbjct: 1   MTSSSGDDSVPVPYTLIPSNAAQQNVVVLSLYRPPPCRHRRLLRLCAFYSAAFLLLFAVA 60

Query: 61  FLLFPSDPSLQLVRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYR 120
           FLLFPSDPSLQLVRLKLNRVKVHL+PVV+LDLSFS SLRVRNKNFFSL+Y+++GVSVGYR
Sbjct: 61  FLLFPSDPSLQLVRLKLNRVKVHLVPVVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120

Query: 121 GRRLGFVSSEGGRVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGS 180
           GRRLG+VSSEGGRVSARGSSYVNATLDLNGLEVVHDV YLLADLGKGIIPFDTET+VEGS
Sbjct: 121 GRRLGYVSSEGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETDVEGS 180

Query: 181 VGIFLIKFPIKARVSCEVLVNTNNQTIEHQDCYPE 216
           +G+F IK PIKARVSCEVLVNTNNQTIEHQDCYPE
Sbjct: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215

[Close]
BLAST of Cla010625 vs. TrEMBL
Match: A0A061GN48_THECC (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isoform 1 OS=Theobroma cacao GN=TCM_037898 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.5e-68
Identity = 135/210 (64.29%), Postives = 160/210 (76.19%), Query Frame = 1 

Query: 6   RDDSVPLPYTLLPQNAAQQNVVVLSLYRPPSCRHRRLLRLCALYSAAFFLLFAVAFLLFP 65
           RD S  +PY  LP N  QQNV+VL +Y     ++ R LR C +++    LL A  F L+P
Sbjct: 7   RDSS--VPYAALPSNPNQQNVIVLPVYYSRPNQNYRCLRRCLIFTGIVVLLSAAVFFLYP 66

Query: 66  SDPSLQLVRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYRGRRLG 125
           SDP+LQLVRL+LN V+V+  P + LDLSFS ++RVRN++FFSLDYD + VSVGYRGR LG
Sbjct: 67  SDPTLQLVRLQLNHVRVNSSPALTLDLSFSLTIRVRNRDFFSLDYDKLVVSVGYRGRELG 126

Query: 126 FVSSEGGRVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGSVGIFL 185
            VSSEGGRV ARGSSYVNATLDLNG EVVHDV YL+AD  KG+IPFDT T+V+G +G+FL
Sbjct: 127 VVSSEGGRVRARGSSYVNATLDLNGFEVVHDVIYLIADWAKGVIPFDTNTKVDGDLGLFL 186

Query: 186 IKFPIKARVSCEVLVNTNNQTIEHQDCYPE 216
            K PIKA VSCEV VNTNNQTI  QDCY E
Sbjct: 187 FKAPIKAEVSCEVYVNTNNQTIVRQDCYAE 214

[Close]
BLAST of Cla010625 vs. TrEMBL
Match: M5VQY3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011027mg PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-66
Identity = 132/197 (67.01%), Postives = 157/197 (79.70%), Query Frame = 1 

Query: 22  AQQNVVVLSLYRP-PSCRHRRLLRLCALYSAAFFLLFAVAFLLFPSDPSLQLVRLKLNRV 81
           +QQ VVVL+ YRP P+ R RR LRLC   +A+  LL    FLLFPSDP+LQLVRLKLN V
Sbjct: 22  SQQTVVVLAPYRPNPNYRRRRRLRLCFSITASLLLLSTAIFLLFPSDPTLQLVRLKLNHV 81

Query: 82  KVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYRGRRLGFVSSEGGRVSARGSS 141
           +V+  P   LDLSFS ++RVRN++ FSL+YD + V+VGYR R LGFVSS+GGRV ARGSS
Sbjct: 82  RVNSSPRPTLDLSFSLTIRVRNRDLFSLNYDSLRVTVGYRARELGFVSSDGGRVRARGSS 141

Query: 142 YVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGSVGIFLIKFPIKARVSCEVLV 201
           YVNATL L+GLEV+HDVFYLL DL +G+IPFDT+TEVEG++G+F  K PIKA+ SCEV V
Sbjct: 142 YVNATLVLDGLEVIHDVFYLLEDLARGVIPFDTDTEVEGTLGLFFFKIPIKAKASCEVYV 201

Query: 202 NTNNQTIEHQDCYPEGR 218
           NTNNQTI  QDC PE R
Sbjct: 202 NTNNQTIVRQDCSPEVR 218

[Close]
BLAST of Cla010625 vs. TrEMBL
Match: A0A067KBX2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07228 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 120/203 (59.11%), Postives = 154/203 (75.86%), Query Frame = 1 

Query: 13  PYTLLPQNAAQQNVVVLSLYRPPSCRHRRLLRLCALYSAAFFLLFAVAFLLFPSDPSLQL 72
           PYT LP +    NV+VL  Y+PP       LR C L+++   LL AV F L+PSDP+LQ+
Sbjct: 9   PYTSLPSHPIPHNVIVLPYYQPPPNPSLIFLRRCLLFTSVILLLSAVVFFLYPSDPALQV 68

Query: 73  VRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYRGRRLGFVSSEGG 132
            R++LN ++V+  P + LD+S S  +RVRN++FFSLDYD + VSVGYRGR LG V S+GG
Sbjct: 69  DRIRLNHIRVNSSPKLTLDISLSLLMRVRNRDFFSLDYDSLDVSVGYRGRELGLVRSQGG 128

Query: 133 RVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGSVGIFLIKFPIKA 192
           ++ ARGSSYVNATLDLNGL+++HDVFYL+ DL +G+IPFDT+T +EG +G+   K PIKA
Sbjct: 129 KLRARGSSYVNATLDLNGLQIIHDVFYLIEDLARGVIPFDTDTMIEGELGLLFFKIPIKA 188

Query: 193 RVSCEVLVNTNNQTIEHQDCYPE 216
           RVSCEV VNTNNQT+  QDCYPE
Sbjct: 189 RVSCEVYVNTNNQTVARQDCYPE 211

[Close]
BLAST of Cla010625 vs. TrEMBL
Match: W9QGI4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020812 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 132/207 (63.77%), Postives = 159/207 (76.81%), Query Frame = 1 

Query: 14  YTLLPQN----AAQQNVVVLSLYRP-PSCRHRRLLRLCALYSAAFFLLFAVAFLLFPSDP 73
           Y+ LP N    A  QNVVVL  YRP PS R  R L  C L SAA  LL A  F+L+PSDP
Sbjct: 10  YSPLPPNPTATAYHQNVVVLPYYRPSPSKRRSRRLCRCLLASAAVLLLIAAVFILYPSDP 69

Query: 74  SLQLVRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYRGRRLGFVS 133
           SLQLVR+ LNRV+V+  P + LDLSF  +++V N++FFSLDYD + VSVGYRGR LGFV+
Sbjct: 70  SLQLVRVHLNRVRVNSSPDLTLDLSFFLTVKVFNRDFFSLDYDSLAVSVGYRGRELGFVN 129

Query: 134 SEGGRVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGSVGIFLIKF 193
           S+GG++ ARGSSYV+ATLDLNG  ++ DVFYLL DL +G+IPFDT T+VEG++G+FL K 
Sbjct: 130 SDGGKIRARGSSYVDATLDLNGFAIIQDVFYLLEDLARGVIPFDTVTKVEGNLGLFLFKI 189

Query: 194 PIKARVSCEVLVNTNNQTIEHQDCYPE 216
           P+KA VSCEV VNTNNQTI  QDCYPE
Sbjct: 190 PLKASVSCEVYVNTNNQTIARQDCYPE 216

[Close]
BLAST of Cla010625 vs. NCBI nr
Match: gi|449461975|ref|XP_004148717.1| (PREDICTED: uncharacterized protein LOC101219269 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 5.8e-106
Identity = 194/215 (90.23%), Postives = 206/215 (95.81%), Query Frame = 1 

Query: 1   MTSSSRDDSVPLPYTLLPQNAAQQNVVVLSLYRPPSCRHRRLLRLCALYSAAFFLLFAVA 60
           MTSSS DDSVP+PYTL+P NAAQQNVVVLSLYRPP CRHRRLLRLCA YSAAF LLFAVA
Sbjct: 1   MTSSSGDDSVPVPYTLIPSNAAQQNVVVLSLYRPPPCRHRRLLRLCAFYSAAFLLLFAVA 60

Query: 61  FLLFPSDPSLQLVRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYR 120
           FLLFPSDPSLQLVRLKLNRVKVHL+PVV+LDLSFS SLRVRNKNFFSL+Y+++GVSVGYR
Sbjct: 61  FLLFPSDPSLQLVRLKLNRVKVHLVPVVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120

Query: 121 GRRLGFVSSEGGRVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGS 180
           GRRLG+VSSEGGRVSARGSSYVNATLDLNGLEVVHDV YLLADLGKGIIPFDTET+VEGS
Sbjct: 121 GRRLGYVSSEGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETDVEGS 180

Query: 181 VGIFLIKFPIKARVSCEVLVNTNNQTIEHQDCYPE 216
           +G+F IK PIKARVSCEVLVNTNNQTIEHQDCYPE
Sbjct: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215

[Close]
BLAST of Cla010625 vs. NCBI nr
Match: gi|659126820|ref|XP_008463384.1| (PREDICTED: uncharacterized protein LOC103501551 [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.1e-101
Identity = 190/215 (88.37%), Postives = 201/215 (93.49%), Query Frame = 1 

Query: 1   MTSSSRDDSVPLPYTLLPQNAAQQNVVVLSLYRPPSCRHRRLLRLCALYSAAFFLLFAVA 60
           MT+SS DDSVP+PYTLL  NAAQQNVVVLSLYRP  CRHRRLLRL A YSAAF LLFAVA
Sbjct: 1   MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60

Query: 61  FLLFPSDPSLQLVRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYR 120
           FLLFPSDPSLQLVRLKLNRVKVHL+P V+LDLSFS SLRVRNKNFFSL+Y+++GVSVGYR
Sbjct: 61  FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120

Query: 121 GRRLGFVSSEGGRVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGS 180
           GRRLG+VSS GGRVSARGSSYVNATLDLNGLEVVHDV YLLADLGKGIIPFDTETEVEGS
Sbjct: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180

Query: 181 VGIFLIKFPIKARVSCEVLVNTNNQTIEHQDCYPE 216
           +G+F IK PIKARVSCEVLVNTNNQTIEHQDCYPE
Sbjct: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215

[Close]
BLAST of Cla010625 vs. NCBI nr
Match: gi|590577307|ref|XP_007013199.1| (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isoform 1 [Theobroma cacao])

HSP 1 Score: 266.9 bits (681), Expect = 3.7e-68
Identity = 135/210 (64.29%), Postives = 160/210 (76.19%), Query Frame = 1 

Query: 6   RDDSVPLPYTLLPQNAAQQNVVVLSLYRPPSCRHRRLLRLCALYSAAFFLLFAVAFLLFP 65
           RD S  +PY  LP N  QQNV+VL +Y     ++ R LR C +++    LL A  F L+P
Sbjct: 7   RDSS--VPYAALPSNPNQQNVIVLPVYYSRPNQNYRCLRRCLIFTGIVVLLSAAVFFLYP 66

Query: 66  SDPSLQLVRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYRGRRLG 125
           SDP+LQLVRL+LN V+V+  P + LDLSFS ++RVRN++FFSLDYD + VSVGYRGR LG
Sbjct: 67  SDPTLQLVRLQLNHVRVNSSPALTLDLSFSLTIRVRNRDFFSLDYDKLVVSVGYRGRELG 126

Query: 126 FVSSEGGRVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGSVGIFL 185
            VSSEGGRV ARGSSYVNATLDLNG EVVHDV YL+AD  KG+IPFDT T+V+G +G+FL
Sbjct: 127 VVSSEGGRVRARGSSYVNATLDLNGFEVVHDVIYLIADWAKGVIPFDTNTKVDGDLGLFL 186

Query: 186 IKFPIKARVSCEVLVNTNNQTIEHQDCYPE 216
            K PIKA VSCEV VNTNNQTI  QDCY E
Sbjct: 187 FKAPIKAEVSCEVYVNTNNQTIVRQDCYAE 214

[Close]
BLAST of Cla010625 vs. NCBI nr
Match: gi|1009160406|ref|XP_015898332.1| (PREDICTED: uncharacterized protein LOC107431840 [Ziziphus jujuba])

HSP 1 Score: 265.8 bits (678), Expect = 8.1e-68
Identity = 133/212 (62.74%), Postives = 166/212 (78.30%), Query Frame = 1 

Query: 4   SSRDDSVPLPYTLLPQNAAQQNVVVLSLYRPPSCRHRRLLRLCALYSAAFFLLFAVAFLL 63
           +S+D+  P+ Y  +P +   QNV+VL LY+P S R RR LRLC L   A  LL A  + L
Sbjct: 2   ASKDE--PVFYAPIPSHPTHQNVIVLPLYQPASYRRRRRLRLC-LIPTAVLLLCAAVYCL 61

Query: 64  FPSDPSLQLVRLKLNRVKVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYRGRR 123
           +PSDP LQL RL+LN V+V+  P + LD+SFS  ++VRN++F+SLDYD + VSVGYRGR 
Sbjct: 62  YPSDPFLQLARLQLNHVRVNSFPKLTLDVSFSLLVKVRNRDFYSLDYDSLVVSVGYRGRE 121

Query: 124 LGFVSSEGGRVSARGSSYVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGSVGI 183
           LGFVSS GGRV ARGSSYVNATL+L+GLEV+HDVFYLLADL KG+IPFDT+TEV G++G+
Sbjct: 122 LGFVSSGGGRVRARGSSYVNATLNLDGLEVIHDVFYLLADLAKGVIPFDTDTEVVGNLGL 181

Query: 184 FLIKFPIKARVSCEVLVNTNNQTIEHQDCYPE 216
           F  K P+KA+VSCEV VNTN+QT+  QDCYPE
Sbjct: 182 FFFKIPLKAKVSCEVYVNTNDQTVVRQDCYPE 210

[Close]
BLAST of Cla010625 vs. NCBI nr
Match: gi|595807016|ref|XP_007202533.1| (hypothetical protein PRUPE_ppa011027mg [Prunus persica])

HSP 1 Score: 259.2 bits (661), Expect = 7.6e-66
Identity = 132/197 (67.01%), Postives = 157/197 (79.70%), Query Frame = 1 

Query: 22  AQQNVVVLSLYRP-PSCRHRRLLRLCALYSAAFFLLFAVAFLLFPSDPSLQLVRLKLNRV 81
           +QQ VVVL+ YRP P+ R RR LRLC   +A+  LL    FLLFPSDP+LQLVRLKLN V
Sbjct: 22  SQQTVVVLAPYRPNPNYRRRRRLRLCFSITASLLLLSTAIFLLFPSDPTLQLVRLKLNHV 81

Query: 82  KVHLLPVVALDLSFSASLRVRNKNFFSLDYDYIGVSVGYRGRRLGFVSSEGGRVSARGSS 141
           +V+  P   LDLSFS ++RVRN++ FSL+YD + V+VGYR R LGFVSS+GGRV ARGSS
Sbjct: 82  RVNSSPRPTLDLSFSLTIRVRNRDLFSLNYDSLRVTVGYRARELGFVSSDGGRVRARGSS 141

Query: 142 YVNATLDLNGLEVVHDVFYLLADLGKGIIPFDTETEVEGSVGIFLIKFPIKARVSCEVLV 201
           YVNATL L+GLEV+HDVFYLL DL +G+IPFDT+TEVEG++G+F  K PIKA+ SCEV V
Sbjct: 142 YVNATLVLDGLEVIHDVFYLLEDLARGVIPFDTDTEVEGTLGLFFFKIPIKAKASCEVYV 201

Query: 202 NTNNQTIEHQDCYPEGR 218
           NTNNQTI  QDC PE R
Sbjct: 202 NTNNQTIVRQDCSPEVR 218

The following BLAST results are available for this feature:
BLAST of Cla010625 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTV4_CUCSA4.0e-10690.23Uncharacterized protein OS=Cucumis sativus GN=Csa_1G369500 PE=4 SV=1[more]
A0A061GN48_THECC2.5e-6864.29Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isofor... [more]
M5VQY3_PRUPE5.3e-6667.01Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011027mg PE=4 SV=1[more]
A0A067KBX2_JATCU2.0e-6559.11Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07228 PE=4 SV=1[more]
W9QGI4_9ROSA2.0e-6563.77Uncharacterized protein OS=Morus notabilis GN=L484_020812 PE=4 SV=1[more]
BLAST of Cla010625 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461975|ref|XP_004148717.1|5.8e-10690.23PREDICTED: uncharacterized protein LOC101219269 [Cucumis sativus][more]
gi|659126820|ref|XP_008463384.1|1.1e-10188.37PREDICTED: uncharacterized protein LOC103501551 [Cucumis melo][more]
gi|590577307|ref|XP_007013199.1|3.7e-6864.29Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isofor... [more]
gi|1009160406|ref|XP_015898332.1|8.1e-6862.74PREDICTED: uncharacterized protein LOC107431840 [Ziziphus jujuba][more]
gi|595807016|ref|XP_007202533.1|7.6e-6667.01hypothetical protein PRUPE_ppa011027mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044763 single-organism cellular process
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
biological_process GO:0009269 response to desiccation
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU79270watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla010625Cla010625.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU79270WMU79270transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 98..196
score: 1.2
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 1..215
score: 1.3
NoneNo IPR availablePANTHERPTHR31852:SF15SUBFAMILY NOT NAMEDcoord: 1..215
score: 1.3
NoneNo IPR availableunknownSSF117070LEA14-likecoord: 53..190
score: 2.7