Cla010587 (gene) Watermelon (97103) v1

Overview
NameCla010587
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr6 : 10646485 .. 10646949 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAACGTCAATGACGATCCTCAACCTAGTTTGGAATCTTCCATTCCTAATCCCTCTCTTATGAAAACAACAACTGAGTCTGCTTATGTGAAGAAGAATCCTCATGCATATGAAGATAGATCTGGAACTTTCCCAGTCGATACTCCTACGTTTGCAAATCCGTTGAATCAGGTAACTTCCATAAAGATGGATCACAACAACTTCTTACTGTGGCAGAACATTGCTCTCCCAATCCTTCGTAGCTACAAACTCGAAGGACATCTCACTAGTAAGGATGTCTGTCTTGAAATGTCTATTATTCTTCCTCCCTCAAAGGATGAACCCCGGGGTTTGTTACTCCCAAATCTAAAATATGATATCTTGAAAGTAGCTGATCAACTACTTGTTGGATGGTTGTACAACTCAATGATAGTAGAGGTGGCATCCCAAGTCACCGAGTATGATACAACAAAGGACCTATAG

mRNA sequence

ATGGCTAACGTCAATGACGATCCTCAACCTAGTTTGGAATCTTCCATTCCTAATCCCTCTCTTATGAAAACAACAACTGAGTCTGCTTATGTGAAGAAGAATCCTCATGCATATGAAGATAGATCTGGAACTTTCCCAGTCGATACTCCTACGTTTGCAAATCCGTTGAATCAGGTAACTTCCATAAAGATGGATCACAACAACTTCTTACTGTGGCAGAACATTGCTCTCCCAATCCTTCGTAGCTACAAACTCGAAGGACATCTCACTAGTAAGGATGTCTGTCTTGAAATGTCTATTATTCTTCCTCCCTCAAAGGATGAACCCCGGGGTTTGTTACTCCCAAATCTAAAATATGATATCTTGAAAGTAGCTGATCAACTACTTGTTGGATGGTTGTACAACTCAATGATAGTAGAGGTGGCATCCCAAGTCACCGAGTATGATACAACAAAGGACCTATAG

Coding sequence (CDS)

ATGGCTAACGTCAATGACGATCCTCAACCTAGTTTGGAATCTTCCATTCCTAATCCCTCTCTTATGAAAACAACAACTGAGTCTGCTTATGTGAAGAAGAATCCTCATGCATATGAAGATAGATCTGGAACTTTCCCAGTCGATACTCCTACGTTTGCAAATCCGTTGAATCAGGTAACTTCCATAAAGATGGATCACAACAACTTCTTACTGTGGCAGAACATTGCTCTCCCAATCCTTCGTAGCTACAAACTCGAAGGACATCTCACTAGTAAGGATGTCTGTCTTGAAATGTCTATTATTCTTCCTCCCTCAAAGGATGAACCCCGGGGTTTGTTACTCCCAAATCTAAAATATGATATCTTGAAAGTAGCTGATCAACTACTTGTTGGATGGTTGTACAACTCAATGATAGTAGAGGTGGCATCCCAAGTCACCGAGTATGATACAACAAAGGACCTATAG

Protein sequence

MANVNDDPQPSLESSIPNPSLMKTTTESAYVKKNPHAYEDRSGTFPVDTPTFANPLNQVTSIKMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLLLPNLKYDILKVADQLLVGWLYNSMIVEVASQVTEYDTTKDL
Homology
[Close]
BLAST of Cla010587 vs. TrEMBL
Match: V7CEQ5_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_002G005200g PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-08
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 63  KMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLLLPNLKYDIL 122
           K+DH N+LLW+   LPI+R +KL+GH+     C    +   P       + +PN +++  
Sbjct: 22  KLDHTNYLLWETTILPIIRGHKLDGHVFGNKPCPPEFL---PRTTPGSTVKIPNPEFEEW 81

Query: 123 KVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
               QLL+GWLY++M  ++ASQ+    T K+L
Sbjct: 82  VSNHQLLLGWLYSTMRTDIASQLMRNSTLKEL 110

[Close]
BLAST of Cla010587 vs. TrEMBL
Match: A0A151QNK8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_047566 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-08
Identity = 32/101 (31.68%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 54  NPLNQVTSIKMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLL 113
           N L  + S+K+D +N+ LW+++ + I++  +L+GH+     C E  I    S  +     
Sbjct: 11  NDLPSIVSVKLDRDNYPLWKSLVISIVKGCRLDGHMLGTKECPEEFIASADSSKK----- 70

Query: 114 LPNLKYDILKVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
            PN  ++  +  D  L+GWL NSM +E+A+Q+   +T+K L
Sbjct: 71  -PNPAFENWQAHDSQLLGWLMNSMTIEMATQLLHCETSKQL 105

[Close]
BLAST of Cla010587 vs. TrEMBL
Match: A0A151RKJ3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_035512 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-06
Identity = 34/101 (33.66%), Postives = 53/101 (52.48%), Query Frame = 1 

Query: 54  NPLNQVTSIKMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLL 113
           N L+   S+K+D  N+ LW+++ LP L+ + L+G+L     C    II    K       
Sbjct: 14  NILSIPCSVKLDRKNYRLWKSLVLPSLKGHNLDGYLFGTTKCPPEFIIDETGKKN----- 73

Query: 114 LPNLKYDILKVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
             N  +      DQLL+GWL NSM  EVA+Q+   +T++ +
Sbjct: 74  --NPAFADWTSTDQLLLGWLINSMTQEVATQLLHCETSQQI 107

[Close]
BLAST of Cla010587 vs. TrEMBL
Match: A0A151TYZ8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_004833 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-06
Identity = 32/96 (33.33%), Postives = 56/96 (58.33%), Query Frame = 1 

Query: 61  SIKMDHNNFLLWQNIALPILRSYKLEGHL--TSKDVCLEMSIILPPSKDEPRGLLLPNLK 120
           S+K+D NN++LWQ++ L +++  K+  ++  T+K            + +E + +   NL 
Sbjct: 17  SVKLDRNNYMLWQSLLLHVIKGKKMYSYISVTNKQF----------TNEENKKV---NLT 76

Query: 121 YDILKVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
           Y+     DQ L+GWL+NSM  ++A+Q+  YDT K L
Sbjct: 77  YEEWIANDQQLLGWLFNSMTHDIATQLLHYDTLKKL 99

[Close]
BLAST of Cla010587 vs. NCBI nr
Match: gi|593787208|ref|XP_007156643.1| (hypothetical protein PHAVU_002G005200g, partial [Phaseolus vulgaris])

HSP 1 Score: 67.4 bits (163), Expect = 2.5e-08
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 63  KMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLLLPNLKYDIL 122
           K+DH N+LLW+   LPI+R +KL+GH+     C    +   P       + +PN +++  
Sbjct: 22  KLDHTNYLLWETTILPIIRGHKLDGHVFGNKPCPPEFL---PRTTPGSTVKIPNPEFEEW 81

Query: 123 KVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
               QLL+GWLY++M  ++ASQ+    T K+L
Sbjct: 82  VSNHQLLLGWLYSTMRTDIASQLMRNSTLKEL 110

[Close]
BLAST of Cla010587 vs. NCBI nr
Match: gi|828332633|ref|XP_004513130.2| (PREDICTED: uncharacterized protein LOC101488260, partial [Cicer arietinum])

HSP 1 Score: 66.6 bits (161), Expect = 4.3e-08
Identity = 33/101 (32.67%), Postives = 58/101 (57.43%), Query Frame = 1 

Query: 54  NPLNQVTSIKMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLL 113
           N L    S+K+D +N+LLW+++ LP++R  KL+G++     C E  I    +  +     
Sbjct: 15  NDLPTTVSVKLDRDNYLLWKSLVLPLIRGCKLDGYIIGTKECPEQFISTNDTTKK----- 74

Query: 114 LPNLKYDILKVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
             N  Y+     DQ L+GWL NS+ +++A+Q+   +T+K+L
Sbjct: 75  -NNPDYEEWIAHDQALLGWLRNSVAIDIATQLLHCETSKEL 109

[Close]
BLAST of Cla010587 vs. NCBI nr
Match: gi|1012318520|gb|KYP31890.1| (hypothetical protein KK1_047566 [Cajanus cajan])

HSP 1 Score: 65.9 bits (159), Expect = 7.3e-08
Identity = 32/101 (31.68%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 54  NPLNQVTSIKMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLL 113
           N L  + S+K+D +N+ LW+++ + I++  +L+GH+     C E  I    S  +     
Sbjct: 11  NDLPSIVSVKLDRDNYPLWKSLVISIVKGCRLDGHMLGTKECPEEFIASADSSKK----- 70

Query: 114 LPNLKYDILKVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
            PN  ++  +  D  L+GWL NSM +E+A+Q+   +T+K L
Sbjct: 71  -PNPAFENWQAHDSQLLGWLMNSMTIEMATQLLHCETSKQL 105

[Close]
BLAST of Cla010587 vs. NCBI nr
Match: gi|828335907|ref|XP_012575528.1| (PREDICTED: uncharacterized protein LOC105853050 [Cicer arietinum])

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07
Identity = 33/101 (32.67%), Postives = 56/101 (55.45%), Query Frame = 1 

Query: 54  NPLNQVTSIKMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLL 113
           N L    S+K+D +N+ LW+++ + I++ Y+L+GH+     C E  I    S      + 
Sbjct: 11  NDLPFTVSVKLDRDNYPLWKSLVISIVKGYRLDGHMLGTKECPEKFIASTDS------IK 70

Query: 114 LPNLKYDILKVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
            PN  ++  +  D  L+GWL NSM  E+A+Q+   +T+K L
Sbjct: 71  NPNPAFEDWQAHDSQLLGWLMNSMTTEMATQLLHCETSKQL 105

[Close]
BLAST of Cla010587 vs. NCBI nr
Match: gi|828334685|ref|XP_012575223.1| (PREDICTED: uncharacterized protein LOC101501674 [Cicer arietinum])

HSP 1 Score: 63.2 bits (152), Expect = 4.7e-07
Identity = 33/101 (32.67%), Postives = 56/101 (55.45%), Query Frame = 1 

Query: 54  NPLNQVTSIKMDHNNFLLWQNIALPILRSYKLEGHLTSKDVCLEMSIILPPSKDEPRGLL 113
           N L  V S+K+D +N+ LW+++ + I++ Y+L G++     C E       S D  +   
Sbjct: 11  NDLPFVVSVKLDRDNYPLWKSLVISIVKGYRLHGYMLGTKECPEK---FTASTDSSKN-- 70

Query: 114 LPNLKYDILKVADQLLVGWLYNSMIVEVASQVTEYDTTKDL 155
            PN  ++  +  D  L+GWL NSM  E+A+Q+   +T+K L
Sbjct: 71  -PNPAFEDWQAHDSQLLGWLMNSMTTEMATQLLHCETSKQL 105

The following BLAST results are available for this feature:
BLAST of Cla010587 vs. TrEMBL
Match NameE-valueIdentityDescription
V7CEQ5_PHAVU1.7e-0835.87Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_002G005200g PE... [more]
A0A151QNK8_CAJCA5.1e-0831.68Uncharacterized protein OS=Cajanus cajan GN=KK1_047566 PE=4 SV=1[more]
A0A151RKJ3_CAJCA6.2e-0633.66Uncharacterized protein OS=Cajanus cajan GN=KK1_035512 PE=4 SV=1[more]
A0A151TYZ8_CAJCA6.2e-0633.33Uncharacterized protein OS=Cajanus cajan GN=KK1_004833 PE=4 SV=1[more]
BLAST of Cla010587 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|593787208|ref|XP_007156643.1|2.5e-0835.87hypothetical protein PHAVU_002G005200g, partial [Phaseolus vulgaris][more]
gi|828332633|ref|XP_004513130.2|4.3e-0832.67PREDICTED: uncharacterized protein LOC101488260, partial [Cicer arietinum][more]
gi|1012318520|gb|KYP31890.1|7.3e-0831.68hypothetical protein KK1_047566 [Cajanus cajan][more]
gi|828335907|ref|XP_012575528.1|1.2e-0732.67PREDICTED: uncharacterized protein LOC105853050 [Cicer arietinum][more]
gi|828334685|ref|XP_012575223.1|4.7e-0732.67PREDICTED: uncharacterized protein LOC101501674 [Cicer arietinum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla010587Cla010587.1mRNA