Cla010288 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla010288
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Long-chain fatty acyl-CoA synthetase 6 (AHRD V1 ***- E2D782_ANSCY); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase
Location	Chr9 : 29916256 .. 29917102 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATGTATACATACTACAGGGGACATTGGTGAATGGCAGCCTGATGGATCGATGAAAATAATTGATCGGAGAAAGAATATATTTAAGCTGTCACAGGGGGAGTATGTTGCCGTGGAGAACATTGAAAACATATTCTCGCAATGCCCTCTGATTACCTCGGTAGGAGTTTGGAGAAAGTGATTCTTGCATAACTGAGATACATTAGATGACAGTTTTGTTTCTTTGAGTGCTTTCTTTCTCTAATGGTCACATCTTTTGCTCATATTGGATTATGTTCACTTCTAAAATTTTCATTTTTATCTTTCCTTTCCTCATGGCAAAAACTAATTCCTGTGGCGTACAGATTTGGGTCTATGGAAATAGTTTTGAGTCATTTCTTGTGGGTGTGGTGGTTCCCGATCAAAAGGCCTTGGAGGATTGGGCACGGAATCATAATGTGATTGGTGACTTTAAATCTTTATGCGAGAATCTCGAAGCAAGGAAGTATATTTTGGATGAGCTCAATAGCAATGGTCAGAAGCACCATGTAAGTACCTTTAAGATGTTCAATTTCAGTCAGGATATTATTGTTTATTTACAAATACTTCTTTATCTAATATGGAAATTATTTTGGCAGCTTCGAGGATTTGAGCTATTAAAAGCAATTCATTTGGAACCATATCCCTTTGACATGGAGAGGGATCTGATAACACCAACATTTAAGTTGAAGAGACCACAACTGCTTAAATACTACAAGGTACGACTTATCCCACTTAAATCCTTTAGAATTTCTGCTGTTATCTTTTATTCCGAGCTTCTTTGCATCAGTACTGAATCACCCATCAGAGCTTGTTTCGAGTGTTAA

mRNA sequence

ATGACATGTATACATACTACAGGGGACATTGGTGAATGGCAGCCTGATGGATCGATGAAAATAATTGATCGGAGAAAGAATATATTTAAGCTGTCACAGGGGGAGTATGTTGCCGTGGAGAACATTGAAAACATATTCTCGCAATGCCCTCTGATTACCTCGATTTGGGTCTATGGAAATAGTTTTGAGTCATTTCTTGTGGGTGTGGTGGTTCCCGATCAAAAGGCCTTGGAGGATTGGGCACGGAATCATAATGTGATTGGTGACTTTAAATCTTTATGCGAGAATCTCGAAGCAAGGAAGTATATTTTGGATGAGCTCAATAGCAATGGTCAGAAGCACCATCTTCGAGGATTTGAGCTATTAAAAGCAATTCATTTGGAACCATATCCCTTTGACATGGAGAGGGATCTGATAACACCAACATTTAAGTTGAAGAGACCACAACTGCTTAAATACTACAAGGTACGACTTATCCCACTTAAATCCTTTAGAATTTCTGCTGTTATCTTTTATTCCGAGCTTCTTTGCATCAGTACTGAATCACCCATCAGAGCTTGTTTCGAGTGTTAA

Coding sequence (CDS)

ATGACATGTATACATACTACAGGGGACATTGGTGAATGGCAGCCTGATGGATCGATGAAAATAATTGATCGGAGAAAGAATATATTTAAGCTGTCACAGGGGGAGTATGTTGCCGTGGAGAACATTGAAAACATATTCTCGCAATGCCCTCTGATTACCTCGATTTGGGTCTATGGAAATAGTTTTGAGTCATTTCTTGTGGGTGTGGTGGTTCCCGATCAAAAGGCCTTGGAGGATTGGGCACGGAATCATAATGTGATTGGTGACTTTAAATCTTTATGCGAGAATCTCGAAGCAAGGAAGTATATTTTGGATGAGCTCAATAGCAATGGTCAGAAGCACCATCTTCGAGGATTTGAGCTATTAAAAGCAATTCATTTGGAACCATATCCCTTTGACATGGAGAGGGATCTGATAACACCAACATTTAAGTTGAAGAGACCACAACTGCTTAAATACTACAAGGTACGACTTATCCCACTTAAATCCTTTAGAATTTCTGCTGTTATCTTTTATTCCGAGCTTCTTTGCATCAGTACTGAATCACCCATCAGAGCTTGTTTCGAGTGTTAA

Protein sequence

MTCIHTTGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFLVGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIHLEPYPFDMERDLITPTFKLKRPQLLKYYKVRLIPLKSFRISAVIFYSELLCISTESPIRACFEC

Homology

[Close]

BLAST of Cla010288 vs. Swiss-Prot
Match: LACS2_ARATH (Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana GN=LACS2 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-64
Identity = 116/150 (77.33%), Postives = 134/150 (89.33%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQ DGSMKIIDR+KNIFKLSQGEYVAVEN+EN +S+CPLI  IWVYGNSFESFL
Sbjct: 501 TGDIGEWQEDGSMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIAQIWVYGNSFESFL 560

Query: 67  VGVVVPDQKALEDWAR-NHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAI 126
           VGVVVPD+KA+EDWA+ N+    DF+SLC+NL+A+KY LDELNS  +++ L+GFE+LKAI
Sbjct: 561 VGVVVPDRKAIEDWAKLNYQSPNDFESLCQNLKAQKYFLDELNSTAKQYQLKGFEMLKAI 620

Query: 127 HLEPYPFDMERDLITPTFKLKRPQLLKYYK 156
           HLEP PFD+ERDLITPTFKLKRPQLL++YK
Sbjct: 621 HLEPNPFDIERDLITPTFKLKRPQLLQHYK 650

[Close]

BLAST of Cla010288 vs. Swiss-Prot
Match: LACS4_ARATH (Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana GN=LACS4 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-55
Identity = 97/149 (65.10%), Postives = 121/149 (81.21%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGD+GEWQPDGSMKIIDR+KNIFKLSQGEYVAVENIENI+ +   + S+WVYGNSFESFL
Sbjct: 500 TGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFESFL 559

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           + +  P+Q  LE WA  + V GD+ +LC+N +A+++IL EL    ++  ++GFE++KAIH
Sbjct: 560 IAIANPNQHILERWAAENGVSGDYDALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIH 619

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYK 156
           L+P PFDMERDL+TPTFK KRPQLLKYY+
Sbjct: 620 LDPVPFDMERDLLTPTFKKKRPQLLKYYQ 648

[Close]

BLAST of Cla010288 vs. Swiss-Prot
Match: LACS5_ARATH (Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana GN=LACS5 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-54
Identity = 97/149 (65.10%), Postives = 121/149 (81.21%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGD+GEWQP+GSMKIIDR+KNIFKL+QGEYVAVEN+EN++SQ  +I SIWVYGNSFESFL
Sbjct: 500 TGDVGEWQPNGSMKIIDRKKNIFKLAQGEYVAVENLENVYSQVEVIESIWVYGNSFESFL 559

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V +  P Q+ LE WA  + V GDF S+C+N +A+ +IL EL    +++ L+GFE++K +H
Sbjct: 560 VAIANPAQQTLERWAVENGVNGDFNSICQNAKAKAFILGELVKTAKENKLKGFEIIKDVH 619

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYK 156
           LEP  FDMERDL+TPT+K KRPQLLKYY+
Sbjct: 620 LEPVAFDMERDLLTPTYKKKRPQLLKYYQ 648

[Close]

BLAST of Cla010288 vs. Swiss-Prot
Match: LACS3_ARATH (Long chain acyl-CoA synthetase 3 OS=Arabidopsis thaliana GN=LACS3 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-54
Identity = 95/149 (63.76%), Postives = 119/149 (79.87%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGD+GEWQPDG+MKIIDR+KNIFKLSQGEYVAVEN+ENI+S    I SIWVYGNS+ES+L
Sbjct: 500 TGDVGEWQPDGAMKIIDRKKNIFKLSQGEYVAVENLENIYSHVAAIESIWVYGNSYESYL 559

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VV P +  +E WA+ H V GDF+S+C N + ++++L E N   +   L+GFEL+K +H
Sbjct: 560 VAVVCPSKIQIEHWAKEHKVSGDFESICRNQKTKEFVLGEFNRVAKDKKLKGFELIKGVH 619

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYK 156
           L+  PFDMERDLITP++K+KRPQLLKYY+
Sbjct: 620 LDTVPFDMERDLITPSYKMKRPQLLKYYQ 648

[Close]

BLAST of Cla010288 vs. Swiss-Prot
Match: LACS1_ARATH (Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana GN=LACS1 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.2e-40
Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGE  P+G +KIIDR+KN+ KLSQGEYVA+E++ENIF Q  ++  IWVYG+SF+S L
Sbjct: 497 TGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEHLENIFGQNSVVQDIWVYGDSFKSML 556

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VVVP+ + +  WA++      F+ LC   E +++I+ EL S  +K+ LR FE +KA+ 
Sbjct: 557 VAVVVPNPETVNRWAKDLGFTKPFEELCSFPELKEHIISELKSTAEKNKLRKFEYIKAVT 616

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYKVRL 159
           +E  PFD+ERDL+T T K +R  LLKYY+V++
Sbjct: 617 VETKPFDVERDLVTATLKNRRNNLLKYYQVQI 648

[Close]

BLAST of Cla010288 vs. TrEMBL
Match: A0A0A0LL21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238260 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.7e-77
Identity = 141/152 (92.76%), Postives = 147/152 (96.71%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQPDGSMKIIDR+KNIFKLSQGEYVAVENIENIF QC LITSIWVYGNSFESFL
Sbjct: 498 TGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIFLQCSLITSIWVYGNSFESFL 557

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           VGV VPDQKALEDWA+NHN+ GDFKSLCENL+ARKYILDELNSNGQKHHLRGFELLKAIH
Sbjct: 558 VGVAVPDQKALEDWAQNHNMTGDFKSLCENLKARKYILDELNSNGQKHHLRGFELLKAIH 617

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYKVRL 159
           LEPYPFDMERDLITPTFKLKRPQLLKYYK ++
Sbjct: 618 LEPYPFDMERDLITPTFKLKRPQLLKYYKEQI 649

[Close]

BLAST of Cla010288 vs. TrEMBL
Match: D7TPV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01880 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 8.9e-71
Identity = 127/149 (85.23%), Postives = 140/149 (93.96%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQP+G+MKIIDR+KNIFKLSQGEYVAVEN+EN +S+CPLITSIWVYGNSFESFL
Sbjct: 496 TGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLITSIWVYGNSFESFL 555

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VVVPD+KALEDWA NHNV GDFKSLCENLEARKYILDELN+ GQ H L+GFE LKA+H
Sbjct: 556 VAVVVPDKKALEDWAENHNVTGDFKSLCENLEARKYILDELNNTGQNHQLKGFERLKAVH 615

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYK 156
           L+P PFD+ERDL+TPTFKLKRPQLLKYYK
Sbjct: 616 LDPNPFDIERDLVTPTFKLKRPQLLKYYK 644

[Close]

BLAST of Cla010288 vs. TrEMBL
Match: A0A0B2QZD1_GLYSO (Long chain acyl-CoA synthetase 2 OS=Glycine soja GN=glysoja_010256 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 8.3e-69
Identity = 129/153 (84.31%), Postives = 139/153 (90.85%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQP+G+MKIIDR+KNIFKLSQGEYVAVENIEN + QCPLITSIWVYGNSFESFL
Sbjct: 496 TGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSIWVYGNSFESFL 555

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VVVP++KALEDWA  HN   DFKSLCEN +ARKYILDELN+ GQKH LRGFELLKA+H
Sbjct: 556 VAVVVPERKALEDWAVKHNSTDDFKSLCENPKARKYILDELNNTGQKHQLRGFELLKAVH 615

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYKVRLI 160
           LEP PFDMERDLITPTFKLKRPQLLK YKV L+
Sbjct: 616 LEPIPFDMERDLITPTFKLKRPQLLKQYKVCLL 648

[Close]

BLAST of Cla010288 vs. TrEMBL
Match: I1KKP6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G161900 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.8e-68
Identity = 125/152 (82.24%), Postives = 138/152 (90.79%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQ +G+MKIIDR+KNIFKLSQGEY+AVENIEN + QCPLI SIWVYGNSFESFL
Sbjct: 497 TGDIGEWQSNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFL 556

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VV+P++  +EDWA+ HNV  DFKSLC+NL+ARKYILDELNS GQKH LRGFELLKAIH
Sbjct: 557 VAVVIPERTVIEDWAKEHNVTDDFKSLCDNLKARKYILDELNSTGQKHQLRGFELLKAIH 616

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYKVRL 159
           LEP PFDMERDLITPTFKLKRPQLLKYYK R+
Sbjct: 617 LEPIPFDMERDLITPTFKLKRPQLLKYYKDRI 648

[Close]

BLAST of Cla010288 vs. TrEMBL
Match: A0A151TEV6_CAJCA (Long-chain-fatty-acid--CoA ligase 5 OS=Cajanus cajan GN=KK1_011814 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.8e-68
Identity = 125/149 (83.89%), Postives = 138/149 (92.62%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQP+G+MKIIDR+KNIFKLSQGEY+AVENIEN + QCPLIT+IWVYGNSFESFL
Sbjct: 498 TGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLITTIWVYGNSFESFL 557

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VVVP++KA+EDWA  HN+  DFKSLC+NL+ARKYILDELNS GQKH L+GFE LKAIH
Sbjct: 558 VAVVVPERKAIEDWALQHNLTDDFKSLCDNLKARKYILDELNSTGQKHQLKGFEQLKAIH 617

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYK 156
           LEP PFDMERDLITPTFKLKRPQLLKYYK
Sbjct: 618 LEPNPFDMERDLITPTFKLKRPQLLKYYK 646

[Close]

BLAST of Cla010288 vs. NCBI nr
Match: gi|659118672|ref|XP_008459243.1| (PREDICTED: long chain acyl-CoA synthetase 2 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 142/152 (93.42%), Postives = 147/152 (96.71%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQPDGSMKIIDR+KNIFKLSQGEYVAVENIENIF QCPLITSIWVYGNSFESFL
Sbjct: 498 TGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIFLQCPLITSIWVYGNSFESFL 557

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           VGV VPDQKALEDWA+NHNV GDFKSLCENL+ARKYILDELNSNGQKH LRGFELLKAIH
Sbjct: 558 VGVAVPDQKALEDWAQNHNVTGDFKSLCENLKARKYILDELNSNGQKHRLRGFELLKAIH 617

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYKVRL 159
           LEPYPFDMERDLITPTFKLKRPQLLKYYK ++
Sbjct: 618 LEPYPFDMERDLITPTFKLKRPQLLKYYKEQI 649

[Close]

BLAST of Cla010288 vs. NCBI nr
Match: gi|778669213|ref|XP_011649216.1| (PREDICTED: long chain acyl-CoA synthetase 2 [Cucumis sativus])

HSP 1 Score: 297.0 bits (759), Expect = 2.4e-77
Identity = 141/152 (92.76%), Postives = 147/152 (96.71%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQPDGSMKIIDR+KNIFKLSQGEYVAVENIENIF QC LITSIWVYGNSFESFL
Sbjct: 498 TGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIFLQCSLITSIWVYGNSFESFL 557

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           VGV VPDQKALEDWA+NHN+ GDFKSLCENL+ARKYILDELNSNGQKHHLRGFELLKAIH
Sbjct: 558 VGVAVPDQKALEDWAQNHNMTGDFKSLCENLKARKYILDELNSNGQKHHLRGFELLKAIH 617

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYKVRL 159
           LEPYPFDMERDLITPTFKLKRPQLLKYYK ++
Sbjct: 618 LEPYPFDMERDLITPTFKLKRPQLLKYYKEQI 649

[Close]

BLAST of Cla010288 vs. NCBI nr
Match: gi|225428594|ref|XP_002281151.1| (PREDICTED: long chain acyl-CoA synthetase 2 [Vitis vinifera])

HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70
Identity = 127/149 (85.23%), Postives = 140/149 (93.96%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQP+G+MKIIDR+KNIFKLSQGEYVAVEN+EN +S+CPLITSIWVYGNSFESFL
Sbjct: 496 TGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLITSIWVYGNSFESFL 555

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VVVPD+KALEDWA NHNV GDFKSLCENLEARKYILDELN+ GQ H L+GFE LKA+H
Sbjct: 556 VAVVVPDKKALEDWAENHNVTGDFKSLCENLEARKYILDELNNTGQNHQLKGFERLKAVH 615

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYK 156
           L+P PFD+ERDL+TPTFKLKRPQLLKYYK
Sbjct: 616 LDPNPFDIERDLVTPTFKLKRPQLLKYYK 644

[Close]

BLAST of Cla010288 vs. NCBI nr
Match: gi|734387576|gb|KHN25339.1| (Long chain acyl-CoA synthetase 2 [Glycine soja])

HSP 1 Score: 268.1 bits (684), Expect = 1.2e-68
Identity = 129/153 (84.31%), Postives = 139/153 (90.85%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQP+G+MKIIDR+KNIFKLSQGEYVAVENIEN + QCPLITSIWVYGNSFESFL
Sbjct: 496 TGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSIWVYGNSFESFL 555

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VVVP++KALEDWA  HN   DFKSLCEN +ARKYILDELN+ GQKH LRGFELLKA+H
Sbjct: 556 VAVVVPERKALEDWAVKHNSTDDFKSLCENPKARKYILDELNNTGQKHQLRGFELLKAVH 615

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYKVRLI 160
           LEP PFDMERDLITPTFKLKRPQLLK YKV L+
Sbjct: 616 LEPIPFDMERDLITPTFKLKRPQLLKQYKVCLL 648

[Close]

BLAST of Cla010288 vs. NCBI nr
Match: gi|356523415|ref|XP_003530335.1| (PREDICTED: long chain acyl-CoA synthetase 2-like [Glycine max])

HSP 1 Score: 266.9 bits (681), Expect = 2.6e-68
Identity = 125/152 (82.24%), Postives = 138/152 (90.79%), Query Frame = 1


Query: 7   TGDIGEWQPDGSMKIIDRRKNIFKLSQGEYVAVENIENIFSQCPLITSIWVYGNSFESFL 66
           TGDIGEWQ +G+MKIIDR+KNIFKLSQGEY+AVENIEN + QCPLI SIWVYGNSFESFL
Sbjct: 497 TGDIGEWQSNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFL 556

Query: 67  VGVVVPDQKALEDWARNHNVIGDFKSLCENLEARKYILDELNSNGQKHHLRGFELLKAIH 126
           V VV+P++  +EDWA+ HNV  DFKSLC+NL+ARKYILDELNS GQKH LRGFELLKAIH
Sbjct: 557 VAVVIPERTVIEDWAKEHNVTDDFKSLCDNLKARKYILDELNSTGQKHQLRGFELLKAIH 616

Query: 127 LEPYPFDMERDLITPTFKLKRPQLLKYYKVRL 159
           LEP PFDMERDLITPTFKLKRPQLLKYYK R+
Sbjct: 617 LEPIPFDMERDLITPTFKLKRPQLLKYYKDRI 648

The following BLAST results are available for this feature:

BLAST of Cla010288 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LACS2_ARATH	1.8e-64	77.33	Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana GN=LACS2 PE=2 SV=1	[more]
LACS4_ARATH	5.7e-55	65.10	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana GN=LACS4 PE=2 SV=1	[more]
LACS5_ARATH	2.8e-54	65.10	Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana GN=LACS5 PE=2 SV=1	[more]
LACS3_ARATH	2.8e-54	63.76	Long chain acyl-CoA synthetase 3 OS=Arabidopsis thaliana GN=LACS3 PE=2 SV=1	[more]
LACS1_ARATH	5.2e-40	51.97	Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana GN=LACS1 PE=2 SV=1	[more]

BLAST of Cla010288 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL21_CUCSA	1.7e-77	92.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238260 PE=4 SV=1	[more]
D7TPV8_VITVI	8.9e-71	85.23	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01880 PE=4 SV=...	[more]
A0A0B2QZD1_GLYSO	8.3e-69	84.31	Long chain acyl-CoA synthetase 2 OS=Glycine soja GN=glysoja_010256 PE=4 SV=1	[more]
I1KKP6_SOYBN	1.8e-68	82.24	Uncharacterized protein OS=Glycine max GN=GLYMA_07G161900 PE=4 SV=1	[more]
A0A151TEV6_CAJCA	1.8e-68	83.89	Long-chain-fatty-acid--CoA ligase 5 OS=Cajanus cajan GN=KK1_011814 PE=4 SV=1	[more]

BLAST of Cla010288 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118672\|ref\|XP_008459243.1\|	1.1e-77	93.42	PREDICTED: long chain acyl-CoA synthetase 2 [Cucumis melo]	[more]
gi\|778669213\|ref\|XP_011649216.1\|	2.4e-77	92.76	PREDICTED: long chain acyl-CoA synthetase 2 [Cucumis sativus]	[more]
gi\|225428594\|ref\|XP_002281151.1\|	1.3e-70	85.23	PREDICTED: long chain acyl-CoA synthetase 2 [Vitis vinifera]	[more]
gi\|734387576\|gb\|KHN25339.1\|	1.2e-68	84.31	Long chain acyl-CoA synthetase 2 [Glycine soja]	[more]
gi\|356523415\|ref\|XP_003530335.1\|	2.6e-68	82.24	PREDICTED: long chain acyl-CoA synthetase 2-like [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000873	AMP-dep_Synth/Lig
IPR025110	AMP-bd_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010143	cutin biosynthetic process
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0002213	defense response to insect
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0010311	lateral root formation
biological_process	GO:0001676	long-chain fatty acid metabolic process
biological_process	GO:0010025	wax biosynthetic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004467	long-chain fatty acid-CoA ligase activity
molecular_function	GO:0031957	very long-chain fatty acid-CoA ligase activity
molecular_function	GO:0003824	catalytic activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU45086	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla010288	Cla010288.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU45086	WMU45086	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 6..32 score: 2.
IPR025110	AMP-binding enzyme C-terminal domain	PFAM	PF13193	AMP-binding_C	coord: 42..91 score: 1.
None	No IPR available	PANTHER	PTHR24096	FAMILY NOT NAMED	coord: 7..155 score: 3.0E
None	No IPR available	PANTHER	PTHR24096:SF134	LONG CHAIN ACYL-COA SYNTHETASE 2	coord: 7..155 score: 3.0E
None	No IPR available	unknown	SSF56801	Acetyl-CoA synthetase-like	coord: 6..155 score: 1.26

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla010288	Cla97C09G179150	Watermelon (97103) v2	wmwmbB042
Cla010288	Csa2G238260	Cucumber (Chinese Long) v2	cuwmB101
Cla010288	MELO3C021941	Melon (DHL92) v3.5.1	mewmB085
Cla010288	ClCG09G017750	Watermelon (Charleston Gray)	wcgwmB008
Cla010288	CSPI02G11840	Wild cucumber (PI 183967)	cpiwmB106
Cla010288	Cucsa.109940	Cucumber (Gy14) v1	cgywmB154
Cla010288	CmaCh20G008770	Cucurbita maxima (Rimu)	cmawmB509
Cla010288	CmoCh20G008840	Cucurbita moschata (Rifu)	cmowmB502
Cla010288	Lsi10G003310	Bottle gourd (USVL1VR-Ls)	lsiwmB043
Cla010288	Cp4.1LG16g02260	Cucurbita pepo (Zucchini)	cpewmB273
Cla010288	CsGy2G011870	Cucumber (Gy14) v2	cgybwmB099
Cla010288	MELO3C021941.2	Melon (DHL92) v3.6.1	medwmB084
Cla010288	Carg23627	Silver-seed gourd	carwmB0794
Cla010288	CsaV3_2G014350	Cucumber (Chinese Long) v3	cucwmB113
Cla010288	Bhi10G001667	Wax gourd	wgowmB358

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla010288	Silver-seed gourd	carwmB0893
Cla010288	Cucumber (Chinese Long) v3	cucwmB474
Cla010288	Watermelon (97103) v2	wmwmbB008
Cla010288	Watermelon (97103) v2	wmwmbB021
Cla010288	Wax gourd	wgowmB250
Cla010288	Watermelon (97103) v1	wmwmB025
Cla010288	Cucumber (Gy14) v1	cgywmB131
Cla010288	Cucumber (Gy14) v1	cgywmB418
Cla010288	Cucurbita maxima (Rimu)	cmawmB082
Cla010288	Cucurbita maxima (Rimu)	cmawmB548
Cla010288	Cucurbita moschata (Rifu)	cmowmB076
Cla010288	Cucurbita moschata (Rifu)	cmowmB538
Cla010288	Wild cucumber (PI 183967)	cpiwmB463
Cla010288	Wild cucumber (PI 183967)	cpiwmB584
Cla010288	Melon (DHL92) v3.5.1	mewmB552
Cla010288	Watermelon (Charleston Gray)	wcgwmB117
Cla010288	Cucumber (Chinese Long) v2	cuwmB448
Cla010288	Cucurbita pepo (Zucchini)	cpewmB685
Cla010288	Bottle gourd (USVL1VR-Ls)	lsiwmB088
Cla010288	Cucumber (Gy14) v2	cgybwmB420
Cla010288	Cucumber (Gy14) v2	cgybwmB527
Cla010288	Melon (DHL92) v3.6.1	medwmB538