Cla010091 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla010091
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Sentrin/sumo-specific protease (AHRD V1 ***- E5GBJ8_CUCME)
Location	Chr5 : 32184128 .. 32184547 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATGGAGCAAGAGAAAACGACGAACACACCTCTGAAGATTGACTGGAAGAAAGTTTGGCGTAAACACGAGGAACCTACACCTGATTTAGTCATTCAGCCCGCCATCACGGCCACGAAACATCTTGAAATGGACTCCGATCGGCAGCATTTGTTAAGGGAAGAATTGCAAAAGCTTAGCGATGGCGAGCTGGAAGATAAGATTCGCAGAATGAAGCATTCCTACGAGACCATCTCTTCCGGATTGCCAGACAAGGGGAAAAAGTATCGTCACAATCTAGTGCTGTCAGAGGAAGAGAGGGAATTCAGAAAGCTCCGTCGAGTTGAAAAGGTCTTCCTGTTACGTTTTGATTCCCTCCTTTTAATTCATTTACTCGCGTTAATTACTCCGTTAATTTTGGTTTCTTGTGAAACCTGA

mRNA sequence

ATGGTGATGGAGCAAGAGAAAACGACGAACACACCTCTGAAGATTGACTGGAAGAAAGTTTGGCGTAAACACGAGGAACCTACACCTGATTTAGTCATTCAGCCCGCCATCACGGCCACGAAACATCTTGAAATGGACTCCGATCGGCAGCATTTGTTAAGGGAAGAATTGCAAAAGCTTAGCGATGGCGAGCTGGAAGATAAGATTCGCAGAATGAAGCATTCCTACGAGACCATCTCTTCCGGATTGCCAGACAAGGGGAAAAAGTATCGTCACAATCTAGTGCTGTCAGAGGAAGAGAGGGAATTCAGAAAGCTCCGTCGAGTTGAAAAGGTCTTCCTGTTACGTTTTGATTCCCTCCTTTTAATTCATTTACTCGCGTTAATTACTCCGTTAATTTTGGTTTCTTGTGAAACCTGA

Coding sequence (CDS)

ATGGTGATGGAGCAAGAGAAAACGACGAACACACCTCTGAAGATTGACTGGAAGAAAGTTTGGCGTAAACACGAGGAACCTACACCTGATTTAGTCATTCAGCCCGCCATCACGGCCACGAAACATCTTGAAATGGACTCCGATCGGCAGCATTTGTTAAGGGAAGAATTGCAAAAGCTTAGCGATGGCGAGCTGGAAGATAAGATTCGCAGAATGAAGCATTCCTACGAGACCATCTCTTCCGGATTGCCAGACAAGGGGAAAAAGTATCGTCACAATCTAGTGCTGTCAGAGGAAGAGAGGGAATTCAGAAAGCTCCGTCGAGTTGAAAAGGTCTTCCTGTTACGTTTTGATTCCCTCCTTTTAATTCATTTACTCGCGTTAATTACTCCGTTAATTTTGGTTTCTTGTGAAACCTGA

Protein sequence

MVMEQEKTTNTPLKIDWKKVWRKHEEPTPDLVIQPAITATKHLEMDSDRQHLLREELQKLSDGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEKVFLLRFDSLLLIHLLALITPLILVSCET

Homology

[Close]

BLAST of Cla010091 vs. TrEMBL
Match: E5GBJ8_CUCME (Sentrin/sumo-specific protease OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.8e-27
Identity = 70/112 (62.50%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 1   MVMEQEKTTNTPLKIDWKKVW-RKHEEPTPDLVIQPAITATKHLEMDSDRQHLLREELQK 60
           MV+EQEK TNTPLKIDW KVW RK ++P PDL+I      T   +MDSD +H  REEL K
Sbjct: 1   MVIEQEKPTNTPLKIDWGKVWARKDDDPIPDLLI-----TTTTSKMDSDWEHSSREELLK 60

Query: 61  LSDGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEK 112
           LSDGELEDKIRRM +  +T    LPDKG+K R  + L+EEERE RKLRR+EK
Sbjct: 61  LSDGELEDKIRRMTNLLKTSCYRLPDKGEKLRRCIELAEEERESRKLRRIEK 107

[Close]

BLAST of Cla010091 vs. TrEMBL
Match: A0A0A0KSC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601590 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.5e-24
Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = 1


Query: 1   MVMEQEKTTNTPLKIDWKKVW-RKHEEPTPDLVIQPAITATKHLEMDSDRQHLLREELQK 60
           MV++++K TN P KIDW KVW RK ++P PDL+I     AT   +M SD +H  REELQK
Sbjct: 1   MVIQRDKPTNAPFKIDWGKVWARKDDDPIPDLLI-----ATTTSKMGSDWEHSFREELQK 60

Query: 61  LSDGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEK 112
           LSDGELEDKI RMK+  +T    L DKG+K R ++ L EEERE RKLRR+EK
Sbjct: 61  LSDGELEDKIDRMKNLSKTSCYRLSDKGEKLRRSIELLEEERESRKLRRIEK 107

[Close]

BLAST of Cla010091 vs. TrEMBL
Match: W1PG63_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00058p00168420 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.6e-08
Identity = 38/107 (35.51%), Postives = 67/107 (62.62%), Query Frame = 1


Query: 10  NTPLKIDWKKVWRKHEEPTPDLVI----QPAITATKHLEMDSDRQHLLREELQKLSDGEL 69
           N PLK+DW K+    ++P  +L +    +  I      E+DS    + RE+++K++D +L
Sbjct: 12  NQPLKLDWNKLLPGRDDPVAELEVLSDSRGKIRDETVTELDS--LSMSREKVEKITDHQL 71

Query: 70  EDKIRRMKHSYET-ISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEK 112
           E+KI+R+K +  T  +  LPD G+K+R +L   E+E+E RK++R++K
Sbjct: 72  EEKIQRVKRTLSTSFTLKLPDGGEKFRTSLKRLEDEKERRKIQRLKK 116

[Close]

BLAST of Cla010091 vs. TrEMBL
Match: W9S1V1_9ROSA (Ubiquitin-like-specific protease 1D OS=Morus notabilis GN=L484_027788 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.6e-07
Identity = 39/126 (30.95%), Postives = 64/126 (50.79%), Query Frame = 1


Query: 3   MEQEKTTNTPLKIDWKKVWRKHEE--PTPDLVI------------QPAITATKHLEMDSD 62
           ME+      PL++DW K++ + ++  P P +VI            +PA+ A    +    
Sbjct: 1   MEEGSAAKQPLELDWNKLFYEGDDDGPPPSVVIVNSKALAGENWKEPAMAAADSADRRPA 60

Query: 63  RQHLLREELQKLSDGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLRR 115
            +H   E  ++++D  L ++I   + S   +   LPDKG K R +L   E+ER+ RKLRR
Sbjct: 61  DKH---ETYEQMADHVLLERINSTRQSIPNLIRTLPDKGAKLRESLKCMEDERDRRKLRR 120

[Close]

BLAST of Cla010091 vs. TrEMBL
Match: A0A067JUQ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17731 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-06
Identity = 36/106 (33.96%), Postives = 60/106 (56.60%), Query Frame = 1


Query: 3   MEQEKTTNTPLKIDWKKVWRKHEEPTPDL-VIQPAITATKHLEMDSDRQHLLREELQKLS 62
           ME+E +    LK+DWK+V  ++++  P L +++      K   M +D     R++   ++
Sbjct: 1   MEEENSKKKRLKLDWKEVLDQNDDEPPTLMIVKTTPEPPKPSPMTTDLSS--RDDCSYMT 60

Query: 63  DGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLR 108
           D +L++ I+R K    ++SS LPD G+K R  L   EEE + RKLR
Sbjct: 61  DHQLKEAIKRHKAHITSLSSNLPDNGEKLRTTLKAYEEELDRRKLR 104

[Close]

BLAST of Cla010091 vs. NCBI nr
Match: gi|659090808|ref|XP_008446213.1| (PREDICTED: ubiquitin-like-specific protease 1D [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-26
Identity = 70/112 (62.50%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 1   MVMEQEKTTNTPLKIDWKKVW-RKHEEPTPDLVIQPAITATKHLEMDSDRQHLLREELQK 60
           MV+EQEK TNTPLKIDW KVW RK ++P PDL+I      T   +MDSD +H  REEL K
Sbjct: 1   MVIEQEKPTNTPLKIDWGKVWARKDDDPIPDLLI-----TTTTSKMDSDWEHSSREELLK 60

Query: 61  LSDGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEK 112
           LSDGELEDKIRRM +  +T    LPDKG+K R  + L+EEERE RKLRR+EK
Sbjct: 61  LSDGELEDKIRRMTNLLKTSCYRLPDKGEKLRRCIELAEEERESRKLRRIEK 107

[Close]

BLAST of Cla010091 vs. NCBI nr
Match: gi|307135980|gb|ADN33839.1| (sentrin/sumo-specific protease [Cucumis melo subsp. melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-26
Identity = 70/112 (62.50%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 1   MVMEQEKTTNTPLKIDWKKVW-RKHEEPTPDLVIQPAITATKHLEMDSDRQHLLREELQK 60
           MV+EQEK TNTPLKIDW KVW RK ++P PDL+I      T   +MDSD +H  REEL K
Sbjct: 1   MVIEQEKPTNTPLKIDWGKVWARKDDDPIPDLLI-----TTTTSKMDSDWEHSSREELLK 60

Query: 61  LSDGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEK 112
           LSDGELEDKIRRM +  +T    LPDKG+K R  + L+EEERE RKLRR+EK
Sbjct: 61  LSDGELEDKIRRMTNLLKTSCYRLPDKGEKLRRCIELAEEERESRKLRRIEK 107

[Close]

BLAST of Cla010091 vs. NCBI nr
Match: gi|778705066|ref|XP_011655628.1| (PREDICTED: ubiquitin-like-specific protease 1D [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 5.0e-24
Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = 1


Query: 1   MVMEQEKTTNTPLKIDWKKVW-RKHEEPTPDLVIQPAITATKHLEMDSDRQHLLREELQK 60
           MV++++K TN P KIDW KVW RK ++P PDL+I     AT   +M SD +H  REELQK
Sbjct: 1   MVIQRDKPTNAPFKIDWGKVWARKDDDPIPDLLI-----ATTTSKMGSDWEHSFREELQK 60

Query: 61  LSDGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEK 112
           LSDGELEDKI RMK+  +T    L DKG+K R ++ L EEERE RKLRR+EK
Sbjct: 61  LSDGELEDKIDRMKNLSKTSCYRLSDKGEKLRRSIELLEEERESRKLRRIEK 107

[Close]

BLAST of Cla010091 vs. NCBI nr
Match: gi|1009153520|ref|XP_015894680.1| (PREDICTED: ubiquitin-like-specific protease 1D [Ziziphus jujuba])

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-09
Identity = 47/124 (37.90%), Postives = 64/124 (51.61%), Query Frame = 1


Query: 1   MVMEQEKTTNT-PLKIDWKKVWRKHEEPTPDLVIQPA-----ITATKHLEMDSDRQHLLR 60
           M ME+ K     PL +DW+ +    E+  P ++I  +     I   K   M +       
Sbjct: 1   MCMEEAKPRKRRPLDLDWETLLPSQEDDPPAVLIVKSNNNQNINTLKDSSMAAADSRNSD 60

Query: 61  EELQKLSDGELEDKIRRMKHSYETISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEKVFL 119
            E  +L D EL+D+I R K + E +   LPDKG+K R +L   EEERE RKLRRVE V+L
Sbjct: 61  SEYSELRDHELDDRIVRQKKNIEGMGPRLPDKGEKLRLSLKRMEEERERRKLRRVETVYL 120

[Close]

BLAST of Cla010091 vs. NCBI nr
Match: gi|586701149|ref|XP_006844951.1| (PREDICTED: ubiquitin-like-specific protease 1D [Amborella trichopoda])

HSP 1 Score: 65.9 bits (159), Expect = 6.6e-08
Identity = 38/107 (35.51%), Postives = 67/107 (62.62%), Query Frame = 1


Query: 10  NTPLKIDWKKVWRKHEEPTPDLVI----QPAITATKHLEMDSDRQHLLREELQKLSDGEL 69
           N PLK+DW K+    ++P  +L +    +  I      E+DS    + RE+++K++D +L
Sbjct: 12  NQPLKLDWNKLLPGRDDPVAELEVLSDSRGKIRDETVTELDS--LSMSREKVEKITDHQL 71

Query: 70  EDKIRRMKHSYET-ISSGLPDKGKKYRHNLVLSEEEREFRKLRRVEK 112
           E+KI+R+K +  T  +  LPD G+K+R +L   E+E+E RK++R++K
Sbjct: 72  EEKIQRVKRTLSTSFTLKLPDGGEKFRTSLKRLEDEKERRKIQRLKK 116

The following BLAST results are available for this feature:

BLAST of Cla010091 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBJ8_CUCME	9.8e-27	62.50	Sentrin/sumo-specific protease OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KSC8_CUCSA	3.5e-24	58.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601590 PE=4 SV=1	[more]
W1PG63_AMBTC	4.6e-08	35.51	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00058p00168420 PE=4 SV=...	[more]
W9S1V1_9ROSA	8.6e-07	30.95	Ubiquitin-like-specific protease 1D OS=Morus notabilis GN=L484_027788 PE=4 SV=1	[more]
A0A067JUQ7_JATCU	1.1e-06	33.96	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17731 PE=4 SV=1	[more]

BLAST of Cla010091 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090808\|ref\|XP_008446213.1\|	1.4e-26	62.50	PREDICTED: ubiquitin-like-specific protease 1D [Cucumis melo]	[more]
gi\|307135980\|gb\|ADN33839.1\|	1.4e-26	62.50	sentrin/sumo-specific protease [Cucumis melo subsp. melo]	[more]
gi\|778705066\|ref\|XP_011655628.1\|	5.0e-24	58.04	PREDICTED: ubiquitin-like-specific protease 1D [Cucumis sativus]	[more]
gi\|1009153520\|ref\|XP_015894680.1\|	3.5e-09	37.90	PREDICTED: ubiquitin-like-specific protease 1D [Ziziphus jujuba]	[more]
gi\|586701149\|ref\|XP_006844951.1\|	6.6e-08	35.51	PREDICTED: ubiquitin-like-specific protease 1D [Amborella trichopoda]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU08658	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla010091	Cla010091.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU08658	WMU08658	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla010091	Cla97C05G107450	Watermelon (97103) v2	wmwmbB207
Cla010091	Csa5G601590	Cucumber (Chinese Long) v2	cuwmB401
Cla010091	MELO3C012000	Melon (DHL92) v3.5.1	mewmB061
Cla010091	ClCG05G025290	Watermelon (Charleston Gray)	wcgwmB285
Cla010091	CSPI05G22720	Wild cucumber (PI 183967)	cpiwmB410
Cla010091	Cucsa.286020	Cucumber (Gy14) v1	cgywmB524
Cla010091	CmaCh18G008010	Cucurbita maxima (Rimu)	cmawmB375
Cla010091	CmaCh04G017280	Cucurbita maxima (Rimu)	cmawmB700
Cla010091	CmoCh18G008060	Cucurbita moschata (Rifu)	cmowmB367
Cla010091	CmoCh04G018110	Cucurbita moschata (Rifu)	cmowmB694
Cla010091	Lsi04G005430	Bottle gourd (USVL1VR-Ls)	lsiwmB312
Cla010091	Cp4.1LG09g04960	Cucurbita pepo (Zucchini)	cpewmB028
Cla010091	Cp4.1LG01g15240	Cucurbita pepo (Zucchini)	cpewmB428
Cla010091	CsGy5G022240	Cucumber (Gy14) v2	cgybwmB377
Cla010091	MELO3C012000.2	Melon (DHL92) v3.6.1	medwmB061
Cla010091	Carg14345	Silver-seed gourd	carwmB0232
Cla010091	Carg14465	Silver-seed gourd	carwmB0721
Cla010091	CsaV3_5G031600	Cucumber (Chinese Long) v3	cucwmB428
Cla010091	Bhi07G001378	Wax gourd	wgowmB550

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla010091	Watermelon (97103) v1	wmwmB047
Cla010091	Watermelon (97103) v1	wmwmB120
Cla010091	Watermelon (97103) v1	wmwmB136
Cla010091	Cucumber (Gy14) v1	cgywmB126
Cla010091	Cucumber (Gy14) v1	cgywmB614
Cla010091	Cucurbita maxima (Rimu)	cmawmB374
Cla010091	Cucurbita maxima (Rimu)	cmawmB755
Cla010091	Cucurbita moschata (Rifu)	cmowmB750
Cla010091	Melon (DHL92) v3.5.1	mewmB155
Cla010091	Melon (DHL92) v3.5.1	mewmB275
Cla010091	Melon (DHL92) v3.5.1	mewmB376
Cla010091	Watermelon (Charleston Gray)	wcgwmB070
Cla010091	Watermelon (Charleston Gray)	wcgwmB132
Cla010091	Cucumber (Chinese Long) v2	cuwmB037
Cla010091	Cucumber (Chinese Long) v2	cuwmB242
Cla010091	Cucurbita pepo (Zucchini)	cpewmB105
Cla010091	Bottle gourd (USVL1VR-Ls)	lsiwmB195
Cla010091	Bottle gourd (USVL1VR-Ls)	lsiwmB259
Cla010091	Cucumber (Gy14) v2	cgybwmB035
Cla010091	Cucumber (Gy14) v2	cgybwmB226
Cla010091	Melon (DHL92) v3.6.1	medwmB150
Cla010091	Melon (DHL92) v3.6.1	medwmB371
Cla010091	Silver-seed gourd	carwmB0501
Cla010091	Silver-seed gourd	carwmB0623
Cla010091	Cucumber (Chinese Long) v3	cucwmB041
Cla010091	Cucumber (Chinese Long) v3	cucwmB044
Cla010091	Cucumber (Chinese Long) v3	cucwmB248
Cla010091	Watermelon (97103) v2	wmwmbB190
Cla010091	Watermelon (97103) v2	wmwmbB200
Cla010091	Wax gourd	wgowmB494