Cla009996 (gene) Watermelon (97103) v1

Overview
NameCla009996
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionHeat shock protein (AHRD V1 ***- A9QVH3_9FABA); contains Interpro domain(s) IPR008978 HSP20-like chaperone
LocationChr5 : 32904720 .. 32905521 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAAGCTGTGTCAAATCTGACTCGATTCGTCTCCTTCACGCCTACCAAAGCCTCTAACGATCCCAAGAAGCTTACAGGGTTTGCTCGTAGAAGTAGCATTAAAGCCATGGCTGGGAATGGCAAAGATAATCTCGATCACTTACAGAGAACTAACGGAAAGGAACATCAAACAACTCAGCCACCAAAGAAACGACTAGCTCCAGTTGCTCCTGTTGGTAAGTAGTATAACCTTATTGCTAGATTTAATGTTTTCCCTTCGTTTTTTCTTTTTGTTGAATTTTGTTTATTGGTTGTGTTTGTTTTTTCTTCTAGGGCTTTGGGATCGATTTCCGACGGCCAGAACGGTGCAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGGGCATGGCCATCACCTCCATTTACGAGCGATGGAGCTGGGTACAGCAGGGGAAGAACTCCATGGGAGATTAAGGAAGGGGAAAATGAGTATAAGATGAGGTTCGACATGCCAGGAATGACGAAGAACGATGTGAAGGTGTGGGTGGAGGAGAAAATGCTGGTTGTGAAGGCTGAGAAGGCTGAGAAGGTGAAGAAGACTAGTCCAGAAAATGGGAAGGTAGAAGAAGAAGGAGATTGGTCTGCTAAAAGCTATGGAAGATATAGCAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAAGTAAAAGATGGGGTCTTGTACATAACTATACCAAAGGCTAGTGTTACAAGTAAAATTGTGGACATCAATGTCCAGTGA

mRNA sequence

ATGGCTCAAGCTGTGTCAAATCTGACTCGATTCGTCTCCTTCACGCCTACCAAAGCCTCTAACGATCCCAAGAAGCTTACAGGGTTTGCTCGTAGAAGTAGCATTAAAGCCATGGCTGGGAATGGCAAAGATAATCTCGATCACTTACAGAGAACTAACGGAAAGGAACATCAAACAACTCAGCCACCAAAGAAACGACTAGCTCCAGTTGCTCCTGTTGGGCTTTGGGATCGATTTCCGACGGCCAGAACGGTGCAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGGGCATGGCCATCACCTCCATTTACGAGCGATGGAGCTGGGTACAGCAGGGGAAGAACTCCATGGGAGATTAAGGAAGGGGAAAATGAGTATAAGATGAGGTTCGACATGCCAGGAATGACGAAGAACGATGTGAAGGTGTGGGTGGAGGAGAAAATGCTGGTTGTGAAGGCTGAGAAGGCTGAGAAGGTGAAGAAGACTAGTCCAGAAAATGGGAAGGTAGAAGAAGAAGGAGATTGGTCTGCTAAAAGCTATGGAAGATATAGCAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAAGTAAAAGATGGGGTCTTGTACATAACTATACCAAAGGCTAGTGTTACAAGTAAAATTGTGGACATCAATGTCCAGTGA

Coding sequence (CDS)

ATGGCTCAAGCTGTGTCAAATCTGACTCGATTCGTCTCCTTCACGCCTACCAAAGCCTCTAACGATCCCAAGAAGCTTACAGGGTTTGCTCGTAGAAGTAGCATTAAAGCCATGGCTGGGAATGGCAAAGATAATCTCGATCACTTACAGAGAACTAACGGAAAGGAACATCAAACAACTCAGCCACCAAAGAAACGACTAGCTCCAGTTGCTCCTGTTGGGCTTTGGGATCGATTTCCGACGGCCAGAACGGTGCAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGGGCATGGCCATCACCTCCATTTACGAGCGATGGAGCTGGGTACAGCAGGGGAAGAACTCCATGGGAGATTAAGGAAGGGGAAAATGAGTATAAGATGAGGTTCGACATGCCAGGAATGACGAAGAACGATGTGAAGGTGTGGGTGGAGGAGAAAATGCTGGTTGTGAAGGCTGAGAAGGCTGAGAAGGTGAAGAAGACTAGTCCAGAAAATGGGAAGGTAGAAGAAGAAGGAGATTGGTCTGCTAAAAGCTATGGAAGATATAGCAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAAGTAAAAGATGGGGTCTTGTACATAACTATACCAAAGGCTAGTGTTACAAGTAAAATTGTGGACATCAATGTCCAGTGA

Protein sequence

MAQAVSNLTRFVSFTPTKASNDPKKLTGFARRSSIKAMAGNGKDNLDHLQRTNGKEHQTTQPPKKRLAPVAPVGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKAEKVKKTSPENGKVEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ
Homology
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BLAST of Cla009996 vs. Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.1e-34
Identity = 81/206 (39.32%), Postives = 120/206 (58.25%), Query Frame = 1 

Query: 34  SIKAMAGNGKDNLDH---LQRTNGKEHQTT--QPPKKRLAPVAPVGLWDRFPTARTVQQM 93
           +++A AG   DN D+   + R N  +  T   + P++    ++P GL D +   R+++QM
Sbjct: 46  NVRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQM 105

Query: 94  METMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDV 153
           ++TM+RI +D     G            G    R PWEIK+ E+E +MRFDMPG++K DV
Sbjct: 106 LDTMDRIFEDAITIPGR---------NIGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDV 165

Query: 154 KVWVEEKMLVVKAEKAEKVKKTSPENGKVEEEGDWSAKSYGRYSSRIALPENVQFEQIKA 213
           KV VE+ +LV+K++  E       ENG    E  WS KSY  Y +R+ LP+N + E++KA
Sbjct: 166 KVSVEDDVLVIKSDHRE-------ENGG---EDCWSRKSYSCYDTRLKLPDNCEKEKVKA 225

Query: 214 EVKDGVLYITIPKASVTSKIVDINVQ 235
           E+KDGVLYITIPK  +   ++D+ +Q
Sbjct: 226 ELKDGVLYITIPKTKIERTVIDVQIQ 232

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BLAST of Cla009996 vs. Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.0e-34
Identity = 81/211 (38.39%), Postives = 126/211 (59.72%), Query Frame = 1 

Query: 29  FARRSSIKAMAGNGKDN-LDHLQRTNGKEHQTT---QPPKKRLA-PVAPVGLWDRFPTAR 88
           F R+   +  A + ++N +D +Q+   K +Q +   + P++RL   V+P GL D     R
Sbjct: 34  FPRKIPSRIRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMR 93

Query: 89  TVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGM 148
           T++QM++TM+R+ +D    SG          G+G S  R PW+IKE E+E KMRFDMPG+
Sbjct: 94  TMRQMLDTMDRMFEDTMPVSGR------NRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGL 153

Query: 149 TKNDVKVWVEEKMLVVKAEKAEKVKKTSPENGKVEEEGDWSAKSYGRYSSRIALPENVQF 208
           +K DVK+ VE+ +LV+K E+            K + +  WS +S   Y +R+ LP+N + 
Sbjct: 154 SKEDVKISVEDNVLVIKGEQK-----------KEDSDDSWSGRSVSSYGTRLQLPDNCEK 213

Query: 209 EQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           ++IKAE+K+GVL+ITIPK  V  K++D+ +Q
Sbjct: 214 DKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227

[Close]
BLAST of Cla009996 vs. Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32
Identity = 72/197 (36.55%), Postives = 116/197 (58.88%), Query Frame = 1 

Query: 40  GNGKDNLDHLQRTNGKEHQTT--QPPKKRLAPVAPVGLWDRFPTARTVQQMMETMERIMD 99
           G+ KDN   +Q  +  +  T   + P++    ++P G+ D +   R+++Q+++TM+R+ +
Sbjct: 2   GDNKDNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFE 61

Query: 100 DPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKML 159
           D   + G            G    R PW+IK+ E+E +MRFDMPG+ K DVKV VE+ ML
Sbjct: 62  DTMTFPGR---------NIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDML 121

Query: 160 VVKAEKAEKVKKTSPENGKVEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYI 219
           V+K        K+  E+G    +  WS+++Y  Y +R+ LP+N + +++KAE+K+GVLYI
Sbjct: 122 VIKGGH-----KSEQEHGG---DDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYI 181

Query: 220 TIPKASVTSKIVDINVQ 235
           TIPK  V  K++D+ VQ
Sbjct: 182 TIPKTKVERKVIDVQVQ 181

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BLAST of Cla009996 vs. Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-31
Identity = 78/211 (36.97%), Postives = 121/211 (57.35%), Query Frame = 1 

Query: 31  RRSSIKAMAGNGKDNLD-----HLQRTNGKEHQTT---QPPKKRLAPVAPVGLWDRFPTA 90
           RR + + +A    DN D     H     G  +Q T   + P +    V+P G+ D     
Sbjct: 40  RRPTTRLVARATGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPM 99

Query: 91  RTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPG 150
           RT++QM++TM+R+ +D   + G        +  +G    RTPW+I + ENE KMRFDMPG
Sbjct: 100 RTMRQMIDTMDRLFEDTMTFPGR-------NRASGTGEIRTPWDIHDDENEIKMRFDMPG 159

Query: 151 MTKNDVKVWVEEKMLVVKAEKAEKVKKTSPENGKVEEEGDWSAKSYGRYSSRIALPENVQ 210
           ++K DVKV VE  MLV+K E  ++      E+G+  ++  W  ++Y  Y +R++LP+NV 
Sbjct: 160 LSKEDVKVSVENDMLVIKGEHKKE------EDGR--DKHSW-GRNYSSYDTRLSLPDNVV 219

Query: 211 FEQIKAEVKDGVLYITIPKASVTSKIVDINV 234
            ++IKAE+K+GVL+I+IPK  V  K++D+ +
Sbjct: 220 KDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234

[Close]
BLAST of Cla009996 vs. Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.3e-31
Identity = 77/216 (35.65%), Postives = 119/216 (55.09%), Query Frame = 1 

Query: 19  ASNDPKKLTGFARRSSIKAMAGNGKDNLDHLQRTNGKEHQTTQPPKKRLAPVAPVGLWDR 78
           AS    + TG  + +S+     N        Q  N +     + P++    V+P GL D 
Sbjct: 50  ASRLVAQATGDNKDTSVDVHVSNNN------QGGNNQGSAVERRPRRMALDVSPFGLLDP 109

Query: 79  FPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRF 138
               RT++QMM+TM+R+ +D   + G        S   G    R PW+IK+ ENE KMRF
Sbjct: 110 MSPMRTMRQMMDTMDRLFEDTMTFPG--------SRNRGTGEIRAPWDIKDDENEIKMRF 169

Query: 139 DMPGMTKNDVKVWVEEKMLVVKAEKAEKVKKTSPENGKVEEEGDWSAKSYGRYSSRIALP 198
           DMPG++K +VKV VE+ +LV+K E  ++      E+GK +  G    ++Y  Y +R++LP
Sbjct: 170 DMPGLSKEEVKVSVEDDVLVIKGEHKKE------ESGKDDSWG----RNYSSYDTRLSLP 229

Query: 199 ENVQFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           +NV  +++KAE+K+GVL I+IPK  V  K+ D+ ++
Sbjct: 230 DNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241

[Close]
BLAST of Cla009996 vs. TrEMBL
Match: A0A0A0KTF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591720 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.5e-115
Identity = 211/235 (89.79%), Postives = 220/235 (93.62%), Query Frame = 1 

Query: 1   MAQAVSNLTRFVSFTPTKASNDPKKLTGFARRSSIKAMAGNGKDNLDHLQRTNGKEHQTT 60
           MAQAVSNLTRFV FTPTKASNDPKK   F R+SS+KA+ G+G++NLDHLQRT  KE QT 
Sbjct: 1   MAQAVSNLTRFVCFTPTKASNDPKK---FVRKSSVKAVRGDGRENLDHLQRTIEKEKQTA 60

Query: 61  QPPKKRLAPVAPVGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSR 120
           QPPKKR+APVAP+GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSR
Sbjct: 61  QPPKKRVAPVAPIGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSR 120

Query: 121 GRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKAEKVKKTSPENGKV-EE 180
           GRTPWEIKEGENEYKMRFDMPGMTK+DVKVWVEEKMLVVKAEKAEKVKK S ENGKV EE
Sbjct: 121 GRTPWEIKEGENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEE 180

Query: 181 EGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           EGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKA  TSKIVDINVQ
Sbjct: 181 EGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 232

[Close]
BLAST of Cla009996 vs. TrEMBL
Match: B9RMP5_RICCO (Heat shock protein, putative OS=Ricinus communis GN=RCOM_1082490 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.6e-83
Identity = 158/213 (74.18%), Postives = 174/213 (81.69%), Query Frame = 1 

Query: 31  RRSSIKAMAGN-GKDNLDHLQRTNGKEHQTTQPPKKRLAPVAPVGLWDRFPTARTVQQMM 90
           + S IKAMA +  +DNLDHLQR NGK+HQ    PKKR+A VAPVGLWDRFPTARTVQQMM
Sbjct: 41  KNSVIKAMAASESRDNLDHLQRVNGKQHQQQAQPKKRVARVAPVGLWDRFPTARTVQQMM 100

Query: 91  ETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVK 150
           ETMER+MDDPF YS +WP+P    +G+GY RGRTPWEIKEGENEYKMRFDMPGMTK DVK
Sbjct: 101 ETMERMMDDPFTYSSSWPTPAAPIEGSGYGRGRTPWEIKEGENEYKMRFDMPGMTKEDVK 160

Query: 151 VWVEEKMLVVKAEKAEKVKKTSPENGK--------VEEEGDWSAKSYGRYSSRIALPENV 210
           VWVEEKMLVVKAEK  K K     NG+         EEE +WSAKSYGRYSSRIALPEN+
Sbjct: 161 VWVEEKMLVVKAEKLPKQKVNEERNGEDQKAKAEAEEEEEEWSAKSYGRYSSRIALPENI 220

Query: 211 QFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           QFE+IKAEVKDGVLYITIPKAS  +KI+DINVQ
Sbjct: 221 QFEKIKAEVKDGVLYITIPKASNFAKILDINVQ 253

[Close]
BLAST of Cla009996 vs. TrEMBL
Match: B9HTE1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s06320g PE=3 SV=2)

HSP 1 Score: 305.8 bits (782), Expect = 4.4e-80
Identity = 159/242 (65.70%), Postives = 185/242 (76.45%), Query Frame = 1 

Query: 1   MAQAVSNLTRFVSFTPTKASNDPKKLTGFA--------RRSSIKAMAGNGKDNLDHLQRT 60
           M+ A+SNL+  +     K ++  + L G A          +++KAMA   ++NLDHLQR 
Sbjct: 4   MSHALSNLSLSLPLPSMKGASS-RNLHGIAFSYNHNHKSNNNMKAMAAESRENLDHLQRA 63

Query: 61  NGKEHQTTQPPKKRLAPVAPVGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFT 120
                Q+    KKR+AP AP+GLWDRFPTARTVQQMMETMER+M+DPF YSG WPSP   
Sbjct: 64  RKNPQQSQH--KKRVAPAAPIGLWDRFPTARTVQQMMETMERVMEDPFVYSGRWPSP-LP 123

Query: 121 SDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKAEKVKKTSP 180
            +G+GYSRGRTPWEIKEGE+EYKMRFDMPGMTK DVKVWVEEKMLVVKAEK  +      
Sbjct: 124 VEGSGYSRGRTPWEIKEGEDEYKMRFDMPGMTKEDVKVWVEEKMLVVKAEKVPQKTVNGV 183

Query: 181 ENGKVEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKASVTSKIVDIN 235
           ENG+ EEEG+WSAKSYGRYSSRIALPEN+QFE+I AEVKDGVLYITIPKAS T+KI DIN
Sbjct: 184 ENGE-EEEGEWSAKSYGRYSSRIALPENIQFEKITAEVKDGVLYITIPKASATAKIHDIN 240

[Close]
BLAST of Cla009996 vs. TrEMBL
Match: A0A067K3C8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17893 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.4e-80
Identity = 158/238 (66.39%), Postives = 182/238 (76.47%), Query Frame = 1 

Query: 1   MAQAVSNLTRFVSFTPTKASNDPKKLTGFARRSSIKAMAGNGKDNLDHLQRTNGKEHQTT 60
           M+QA+SNL+  +  +    S   + L     R  +KA A   +DNLDHLQ+   ++H   
Sbjct: 1   MSQALSNLSFSLPLSSKSTSVRSRNL-----RFIVKAKAAENRDNLDHLQKATKQQHHQQ 60

Query: 61  QPPKKRLAPVAPVGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPS-PPFTSDGAGYS 120
              KKR APVAPVGLWDRFPTARTVQQMMETMER+M+DPFAY+G WPS PP   + +GYS
Sbjct: 61  PQTKKRTAPVAPVGLWDRFPTARTVQQMMETMERMMEDPFAYTGTWPSEPPSPVERSGYS 120

Query: 121 RGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKA-EKVKKTSPENG--K 180
           RGRTPWEIKEGE EYKMRFDMPGMTK DVKVWVEEKMLV+KAEK  EK      +NG  +
Sbjct: 121 RGRTPWEIKEGETEYKMRFDMPGMTKEDVKVWVEEKMLVLKAEKVPEKNNVNGAQNGIEE 180

Query: 181 VEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
            EE+G WSAKSYG+YS RIALPEN+QFE+IKAEVKDGVLYITIPKAS T KI+DINVQ
Sbjct: 181 EEEDGGWSAKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPKASTTGKILDINVQ 233

[Close]
BLAST of Cla009996 vs. TrEMBL
Match: M5XTX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010762mg PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 9.2e-78
Identity = 157/239 (65.69%), Postives = 185/239 (77.41%), Query Frame = 1 

Query: 1   MAQAVSNLTRFVSFTP-TKASNDPKKLTGFARRSSIKAMAGNGKDNLDHLQRTNGKEHQT 60
           M+ AVSNL+ F+  +   +  N P  +     ++S+KAMA + +DNLDHLQR   K HQ 
Sbjct: 1   MSHAVSNLSIFLPMSSGRRTKNCPSPVFSKPVKNSLKAMARDARDNLDHLQRATTK-HQQ 60

Query: 61  TQPP--KKRLAPVAPVGLWDRFPTARTVQQMMETMERIMDDPFAYSGA--WPSPPFTSDG 120
            QPP  KKR+A   PVGLWDRFPTARTVQQMMETMER+MDDPFAYSG   W SP  T  G
Sbjct: 61  QQPPQPKKRVASAPPVGLWDRFPTARTVQQMMETMERMMDDPFAYSGGSGWASPLPTETG 120

Query: 121 AGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKAEKVKKTSPENG 180
            GYSRGRTPWEIKEGE +YKMRFDMPGMTK DVKVWVEEKMLVVKAEK  K K++  +  
Sbjct: 121 -GYSRGRTPWEIKEGEADYKMRFDMPGMTKEDVKVWVEEKMLVVKAEKMTKKKESGVQEE 180

Query: 181 KVEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           +     +WSAKSYGRYS+RIALPEN+QFE+IKAEVKDGVLY+TIPKA+ +SKI+DI+V+
Sbjct: 181 EDNGNDEWSAKSYGRYSTRIALPENIQFEKIKAEVKDGVLYVTIPKATSSSKILDIHVE 237

[Close]
BLAST of Cla009996 vs. NCBI nr
Match: gi|449435033|ref|XP_004135300.1| (PREDICTED: small heat shock protein, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 2.1e-115
Identity = 211/235 (89.79%), Postives = 220/235 (93.62%), Query Frame = 1 

Query: 1   MAQAVSNLTRFVSFTPTKASNDPKKLTGFARRSSIKAMAGNGKDNLDHLQRTNGKEHQTT 60
           MAQAVSNLTRFV FTPTKASNDPKK   F R+SS+KA+ G+G++NLDHLQRT  KE QT 
Sbjct: 1   MAQAVSNLTRFVCFTPTKASNDPKK---FVRKSSVKAVRGDGRENLDHLQRTIEKEKQTA 60

Query: 61  QPPKKRLAPVAPVGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSR 120
           QPPKKR+APVAP+GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSR
Sbjct: 61  QPPKKRVAPVAPIGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSR 120

Query: 121 GRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKAEKVKKTSPENGKV-EE 180
           GRTPWEIKEGENEYKMRFDMPGMTK+DVKVWVEEKMLVVKAEKAEKVKK S ENGKV EE
Sbjct: 121 GRTPWEIKEGENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEE 180

Query: 181 EGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           EGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKA  TSKIVDINVQ
Sbjct: 181 EGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 232

[Close]
BLAST of Cla009996 vs. NCBI nr
Match: gi|659090617|ref|XP_008446109.1| (PREDICTED: small heat shock protein, chloroplastic-like [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.3e-113
Identity = 211/236 (89.41%), Postives = 220/236 (93.22%), Query Frame = 1 

Query: 1   MAQAVSNLTRFVSFTPTKA-SNDPKKLTGFARRSSIKAMAGNGKDNLDHLQRTNGKEHQT 60
           MAQAVSNLTRFVSFTPTKA SNDPKK   F RRS++KA+AG+G+DNLDHLQRT GKE QT
Sbjct: 1   MAQAVSNLTRFVSFTPTKAASNDPKK---FVRRSNVKAVAGDGRDNLDHLQRTIGKEKQT 60

Query: 61  TQPPKKRLAPVAPVGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYS 120
           TQPPKKR+APVAP+GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTS+GAGYS
Sbjct: 61  TQPPKKRVAPVAPIGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSEGAGYS 120

Query: 121 RGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKAEKVKKTSPENGKV-E 180
           RGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVV   KAEKVKK   ENGKV E
Sbjct: 121 RGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVV---KAEKVKKAGEENGKVEE 180

Query: 181 EEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           EEGDWSAKSYG+YSSRIALPENVQFEQIKAEVKDGVLYITIPKA  TSKIVDINVQ
Sbjct: 181 EEGDWSAKSYGKYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 230

[Close]
BLAST of Cla009996 vs. NCBI nr
Match: gi|223546065|gb|EEF47568.1| (heat shock protein, putative [Ricinus communis])

HSP 1 Score: 315.5 bits (807), Expect = 8.0e-83
Identity = 158/213 (74.18%), Postives = 174/213 (81.69%), Query Frame = 1 

Query: 31  RRSSIKAMAGN-GKDNLDHLQRTNGKEHQTTQPPKKRLAPVAPVGLWDRFPTARTVQQMM 90
           + S IKAMA +  +DNLDHLQR NGK+HQ    PKKR+A VAPVGLWDRFPTARTVQQMM
Sbjct: 41  KNSVIKAMAASESRDNLDHLQRVNGKQHQQQAQPKKRVARVAPVGLWDRFPTARTVQQMM 100

Query: 91  ETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVK 150
           ETMER+MDDPF YS +WP+P    +G+GY RGRTPWEIKEGENEYKMRFDMPGMTK DVK
Sbjct: 101 ETMERMMDDPFTYSSSWPTPAAPIEGSGYGRGRTPWEIKEGENEYKMRFDMPGMTKEDVK 160

Query: 151 VWVEEKMLVVKAEKAEKVKKTSPENGK--------VEEEGDWSAKSYGRYSSRIALPENV 210
           VWVEEKMLVVKAEK  K K     NG+         EEE +WSAKSYGRYSSRIALPEN+
Sbjct: 161 VWVEEKMLVVKAEKLPKQKVNEERNGEDQKAKAEAEEEEEEWSAKSYGRYSSRIALPENI 220

Query: 211 QFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           QFE+IKAEVKDGVLYITIPKAS  +KI+DINVQ
Sbjct: 221 QFEKIKAEVKDGVLYITIPKASNFAKILDINVQ 253

[Close]
BLAST of Cla009996 vs. NCBI nr
Match: gi|1000975367|ref|XP_015572155.1| (PREDICTED: small heat shock protein, chloroplastic [Ricinus communis])

HSP 1 Score: 315.5 bits (807), Expect = 8.0e-83
Identity = 158/213 (74.18%), Postives = 174/213 (81.69%), Query Frame = 1 

Query: 31  RRSSIKAMAGN-GKDNLDHLQRTNGKEHQTTQPPKKRLAPVAPVGLWDRFPTARTVQQMM 90
           + S IKAMA +  +DNLDHLQR NGK+HQ    PKKR+A VAPVGLWDRFPTARTVQQMM
Sbjct: 42  KNSVIKAMAASESRDNLDHLQRVNGKQHQQQAQPKKRVARVAPVGLWDRFPTARTVQQMM 101

Query: 91  ETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVK 150
           ETMER+MDDPF YS +WP+P    +G+GY RGRTPWEIKEGENEYKMRFDMPGMTK DVK
Sbjct: 102 ETMERMMDDPFTYSSSWPTPAAPIEGSGYGRGRTPWEIKEGENEYKMRFDMPGMTKEDVK 161

Query: 151 VWVEEKMLVVKAEKAEKVKKTSPENGK--------VEEEGDWSAKSYGRYSSRIALPENV 210
           VWVEEKMLVVKAEK  K K     NG+         EEE +WSAKSYGRYSSRIALPEN+
Sbjct: 162 VWVEEKMLVVKAEKLPKQKVNEERNGEDQKAKAEAEEEEEEWSAKSYGRYSSRIALPENI 221

Query: 211 QFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 235
           QFE+IKAEVKDGVLYITIPKAS  +KI+DINVQ
Sbjct: 222 QFEKIKAEVKDGVLYITIPKASNFAKILDINVQ 254

[Close]
BLAST of Cla009996 vs. NCBI nr
Match: gi|1009153190|ref|XP_015894503.1| (PREDICTED: small heat shock protein, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 311.2 bits (796), Expect = 1.5e-81
Identity = 163/250 (65.20%), Postives = 187/250 (74.80%), Query Frame = 1 

Query: 1   MAQAVSNLTRFVSFTPTKASNDPKKLT----------------GFARRSSIKAMAGNGKD 60
           M+QA+SNL+  +  +  K SN   K                  G  R++ + AMAG  +D
Sbjct: 1   MSQALSNLSLVLPLSSGKTSNGANKSLYSWYPSNTFKPAVYGEGRYRKNRVIAMAGENRD 60

Query: 61  NLDHLQRTNGKEHQTTQPPKKRLAPVAPVGLWDRFPTARTVQQMMETMERIMDDPFAYSG 120
           NLDHLQR + ++      PKKR+AP APVGLWDRFPTARTVQQMMETMER+M+DPFAYS 
Sbjct: 61  NLDHLQRISSQQPNHQPQPKKRVAPTAPVGLWDRFPTARTVQQMMETMERMMEDPFAYSS 120

Query: 121 AWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKA 180
            WPSP  TS+  GYSRGRTPWEIKEGE E+KMRFDMPGMTK DVKVWVEEKMLVVKAEK 
Sbjct: 121 GWPSPS-TSETGGYSRGRTPWEIKEGEAEFKMRFDMPGMTKEDVKVWVEEKMLVVKAEKV 180

Query: 181 EKVKKTSPENGKVEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKASV 235
            + KK+    G   EE +WSAKSYGRYSSRIALPEN+QFE+IKAEVKDGVLYITIPKA+ 
Sbjct: 181 PR-KKSENGKGPNGEEEEWSAKSYGRYSSRIALPENIQFEKIKAEVKDGVLYITIPKAAN 240

The following BLAST results are available for this feature:
BLAST of Cla009996 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HS21C_PEA3.1e-3439.32Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1[more]
HS25P_ARATH9.0e-3438.3925.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE... [more]
HS22C_SOYBN2.9e-3236.55Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 ... [more]
HS21C_SOLLC5.4e-3136.97Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV... [more]
HS22C_PETHY9.3e-3135.65Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1[more]
BLAST of Cla009996 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTF5_CUCSA1.5e-11589.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591720 PE=3 SV=1[more]
B9RMP5_RICCO5.6e-8374.18Heat shock protein, putative OS=Ricinus communis GN=RCOM_1082490 PE=3 SV=1[more]
B9HTE1_POPTR4.4e-8065.70Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s06320g PE=3 SV=2[more]
A0A067K3C8_JATCU4.4e-8066.39Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17893 PE=3 SV=1[more]
M5XTX0_PRUPE9.2e-7865.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010762mg PE=3 SV=1[more]
BLAST of Cla009996 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435033|ref|XP_004135300.1|2.1e-11589.79PREDICTED: small heat shock protein, chloroplastic-like [Cucumis sativus][more]
gi|659090617|ref|XP_008446109.1|3.3e-11389.41PREDICTED: small heat shock protein, chloroplastic-like [Cucumis melo][more]
gi|223546065|gb|EEF47568.1|8.0e-8374.18heat shock protein, putative [Ricinus communis][more]
gi|1000975367|ref|XP_015572155.1|8.0e-8374.18PREDICTED: small heat shock protein, chloroplastic [Ricinus communis][more]
gi|1009153190|ref|XP_015894503.1|1.5e-8165.20PREDICTED: small heat shock protein, chloroplastic-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU64009watermelon EST collection version 2.0transcribed_cluster
WMU68275watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla009996Cla009996.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU68275WMU68275transcribed_cluster
WMU64009WMU64009transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 126..231
score: 2.4
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 126..221
score: 21
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 76..233
score: 6.2
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 89..224
score: 2.09
NoneNo IPR availablePANTHERPTHR11527:SF137SUBFAMILY NOT NAMEDcoord: 31..234
score: 1.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla009996Cla97C05G108440Watermelon (97103) v2wmwmbB207
Cla009996Csa5G591720Cucumber (Chinese Long) v2cuwmB401
Cla009996MELO3C011908Melon (DHL92) v3.5.1mewmB063
Cla009996ClCG05G026230Watermelon (Charleston Gray)wcgwmB285
Cla009996CSPI05G21740Wild cucumber (PI 183967)cpiwmB410
Cla009996Cucsa.075390Cucumber (Gy14) v1cgywmB079
Cla009996CmaCh04G018080Cucurbita maxima (Rimu)cmawmB700
Cla009996Lsi04G006440Bottle gourd (USVL1VR-Ls)lsiwmB312
Cla009996Cp4.1LG01g15910Cucurbita pepo (Zucchini)cpewmB428
Cla009996CsGy5G021250Cucumber (Gy14) v2cgybwmB377
Cla009996Carg14284Silver-seed gourdcarwmB0232
Cla009996CsaV3_5G030610Cucumber (Chinese Long) v3cucwmB428
Cla009996Bhi07G001495Wax gourdwgowmB550
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla009996Silver-seed gourdcarwmB0501
Cla009996Silver-seed gourdcarwmB0623
Cla009996Silver-seed gourdcarwmB0686
Cla009996Cucumber (Chinese Long) v3cucwmB137
Cla009996Watermelon (97103) v2wmwmbB225
Cla009996Wax gourdwgowmB338
Cla009996Watermelon (97103) v1wmwmB063
Cla009996Cucumber (Gy14) v1cgywmB708
Cla009996Cucurbita maxima (Rimu)cmawmB160
Cla009996Cucurbita maxima (Rimu)cmawmB375
Cla009996Cucurbita maxima (Rimu)cmawmB755
Cla009996Cucurbita moschata (Rifu)cmowmB146
Cla009996Cucurbita moschata (Rifu)cmowmB367
Cla009996Cucurbita moschata (Rifu)cmowmB694
Cla009996Cucurbita moschata (Rifu)cmowmB750
Cla009996Melon (DHL92) v3.5.1mewmB061
Cla009996Melon (DHL92) v3.5.1mewmB155
Cla009996Melon (DHL92) v3.5.1mewmB320
Cla009996Watermelon (Charleston Gray)wcgwmB416
Cla009996Cucumber (Chinese Long) v2cuwmB123
Cla009996Cucurbita pepo (Zucchini)cpewmB028
Cla009996Cucurbita pepo (Zucchini)cpewmB105
Cla009996Cucurbita pepo (Zucchini)cpewmB796
Cla009996Bottle gourd (USVL1VR-Ls)lsiwmB483
Cla009996Cucumber (Gy14) v2cgybwmB118
Cla009996Melon (DHL92) v3.6.1medwmB061
Cla009996Melon (DHL92) v3.6.1medwmB317