Cla009987 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009987
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	SAUR-like auxin-responsive protein (AHRD V1 ***- Q2V359_ARATH); contains Interpro domain(s) IPR003676 Auxin responsive SAUR protein
Location	Chr5 : 33006683 .. 33007192 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAAATTCAAAGAAATCCAACAAAATCAGAGACATCGTACGGCTTCAACAGATCCTGAAGAAATGGCGGAAGCTAGCGAACTCGTCGAAGACGGCCAACAAAATCTCCGGCACGGCGGCAGGACCTGCCGGAAAGAGCATAAAGTTTCTGAAACGGACGTTATCATCGGCCGGTGGGGAAAGCTGCGGCGGCGCAGTACCAAAAGGCTATTTGGCGGTGAGCGTGGGGGAGGAGCAAAAGCGATTTGTGATACCGACGCAGTATTTAGGGCATCCGGCTTTTGAGATTCTGTTAAGAGAAGCGGAGGAGGAGTTCGGATTTCAACAAACGGGGGTTTTGAGGCTGCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAAAAGAAGAAAGGGGACTTGTTGTTAGGGGGAGAAGAGGTTTTGAGTTTTTGTTCATTGGAAACGCTGCAGTTAACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG

mRNA sequence

ATGGATTCAAATTCAAAGAAATCCAACAAAATCAGAGACATCGTACGGCTTCAACAGATCCTGAAGAAATGGCGGAAGCTAGCGAACTCGTCGAAGACGGCCAACAAAATCTCCGGCACGGCGGCAGGACCTGCCGGAAAGAGCATAAAGTTTCTGAAACGGACGTTATCATCGGCCGGTGGGGAAAGCTGCGGCGGCGCAGTACCAAAAGGCTATTTGGCGGTGAGCGTGGGGGAGGAGCAAAAGCGATTTGTGATACCGACGCAGTATTTAGGGCATCCGGCTTTTGAGATTCTGTTAAGAGAAGCGGAGGAGGAGTTCGGATTTCAACAAACGGGGGTTTTGAGGCTGCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAAAAGAAGAAAGGGGACTTGTTGTTAGGGGGAGAAGAGGTTTTGAGTTTTTGTTCATTGGAAACGCTGCAGTTAACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG

Coding sequence (CDS)

ATGGATTCAAATTCAAAGAAATCCAACAAAATCAGAGACATCGTACGGCTTCAACAGATCCTGAAGAAATGGCGGAAGCTAGCGAACTCGTCGAAGACGGCCAACAAAATCTCCGGCACGGCGGCAGGACCTGCCGGAAAGAGCATAAAGTTTCTGAAACGGACGTTATCATCGGCCGGTGGGGAAAGCTGCGGCGGCGCAGTACCAAAAGGCTATTTGGCGGTGAGCGTGGGGGAGGAGCAAAAGCGATTTGTGATACCGACGCAGTATTTAGGGCATCCGGCTTTTGAGATTCTGTTAAGAGAAGCGGAGGAGGAGTTCGGATTTCAACAAACGGGGGTTTTGAGGCTGCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAAAAGAAGAAAGGGGACTTGTTGTTAGGGGGAGAAGAGGTTTTGAGTTTTTGTTCATTGGAAACGCTGCAGTTAACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG

Protein sequence

MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAGGESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR

Homology

[Close]

BLAST of Cla009987 vs. Swiss-Prot
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 8.2e-13
Identity = 35/113 (30.97%), Postives = 72/113 (63.72%), Query Frame = 1


Query: 17  LQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAGGESCGGAVPKGYLAVS 76
           ++Q++++  ++A+S++ +  +   +  P+ +S  FL+ +++    +    +VP+G++ V 
Sbjct: 1   MKQLIRRLSRVADSAQYS-LLRSDSQRPSRRSESFLRSSVTRRSKKQTS-SVPEGHVPVY 60

Query: 77  VGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVK 130
           VG+E +RFV+  + L HP F  LL  + +E+G++Q GVL++PC V VFE +++
Sbjct: 61  VGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIME 111

[Close]

BLAST of Cla009987 vs. Swiss-Prot
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 43/138 (31.16%), Postives = 73/138 (52.90%), Query Frame = 1


Query: 17  LQQILKKWRKLANSSKTANKISGTAAGPAG---KSIKFLKRTLSSAGGESCGGAVPKGYL 76
           ++ ++++  ++A+SS      SG    P      S+  +KR        +   +VP G++
Sbjct: 1   MKPLIRRLSRIADSSSCNRNRSGDIHHPTSTYSSSVFLVKRA-------TVASSVPSGHV 60

Query: 77  AVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVK---- 136
            V+VGE+++RFV+  + L HP F  LL  + +E+G+ Q GVL +PC V VFE VV+    
Sbjct: 61  PVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRS 120

Query: 137 -LVEEKKKGDLLLGGEEV 147
            + ++  +    L GE+V
Sbjct: 121 GIADDTSELIASLSGEDV 131

[Close]

BLAST of Cla009987 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-12
Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 1


Query: 68  VPKGYLAVSV---GEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF 127
           VPKG LA+ V   GEEQ+RF++P  Y  HP F  LL+EAE+E+GF Q G + +PC V  F
Sbjct: 24  VPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEF 83

Query: 128 ENVVKLVEEKK 136
             V  L++ ++
Sbjct: 84  RYVQALIDGER 94

[Close]

BLAST of Cla009987 vs. Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 9.1e-12
Identity = 29/62 (46.77%), Postives = 44/62 (70.97%), Query Frame = 1


Query: 68  VPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENV 127
           VP+G++ V VG E +RFV+  + L HP F  LL+++ +E+G++Q GVLR+PC V VFE +
Sbjct: 38  VPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERI 97

Query: 128 VK 130
           ++
Sbjct: 98  LE 99

[Close]

BLAST of Cla009987 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 1


Query: 69  PKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQ-TGVLRLPCEVTVFENV 128
           PKGYLAV VGE+ KRFVIP  Y+  P+F+ LL +AEEEFG+    G L +PC   VF+ +
Sbjct: 18  PKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77

[Close]

BLAST of Cla009987 vs. TrEMBL
Match: A0A0A0LHH5_CUCSA (SAUR family protein OS=Cucumis sativus GN=Csa_3G883020 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 9.3e-80
Identity = 158/170 (92.94%), Postives = 162/170 (95.29%), Query Frame = 1


Query: 1   MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAG 60
           MDSN+KKSNKIRDIVRLQQILKKWRKLANSSKTANKI+GTAAGPAGKSIKFLKRTLSSAG
Sbjct: 1   MDSNAKKSNKIRDIVRLQQILKKWRKLANSSKTANKITGTAAGPAGKSIKFLKRTLSSAG 60

Query: 61  GESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 120
           GE     VPKGYLAVSVGEEQKRFVIPT YLGHPAFEILLREAEEEFGFQQTGVLRLPCE
Sbjct: 61  GE-----VPKGYLAVSVGEEQKRFVIPTSYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 120

Query: 121 VTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTP-SHRPQSPMCR 170
           V VFENVVKLVEEKKKGDLLLGGEEVL+FCSLE+LQLTP SHRPQSPMCR
Sbjct: 121 VFVFENVVKLVEEKKKGDLLLGGEEVLNFCSLESLQLTPSSHRPQSPMCR 165

[Close]

BLAST of Cla009987 vs. TrEMBL
Match: B9N6C6_POPTR (Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0006s29280g PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.6e-50
Identity = 112/173 (64.74%), Postives = 134/173 (77.46%), Query Frame = 1


Query: 4   NSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLS---SAG 63
           +SKKSNKIRDIVRLQQILKKWRKLA+SS+T    + T++    KS+KFLKRTLS   ++ 
Sbjct: 2   DSKKSNKIRDIVRLQQILKKWRKLASSSRTTAASTTTSS----KSMKFLKRTLSIPENSA 61

Query: 64  GESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 123
            E+   AVPKGYLAV VGEEQKRF+IPT+YL HPAF ILLREAEEEFGFQQ GVLR+PCE
Sbjct: 62  KETSSNAVPKGYLAVGVGEEQKRFIIPTEYLSHPAFLILLREAEEEFGFQQAGVLRIPCE 121

Query: 124 VTVFENVVKLVEEKK----KGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR 170
           V VFE+++KLVEEKK      +  L  + +  +CS ++ Q TPSH PQSPMCR
Sbjct: 122 VAVFESILKLVEEKKDLFFMQECRLDVDNIAVYCSSKS-QQTPSHHPQSPMCR 169

[Close]

BLAST of Cla009987 vs. TrEMBL
Match: A0A061GH12_THECC (SAUR family protein OS=Theobroma cacao GN=TCM_036780 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.0e-49
Identity = 108/169 (63.91%), Postives = 132/169 (78.11%), Query Frame = 1


Query: 4   NSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAGG-- 63
           +S+KSNKIR+IVRLQQILKKWRKLAN+SK+++  +        KSIKFLKRTLS +    
Sbjct: 2   DSRKSNKIREIVRLQQILKKWRKLANTSKSSSNCNS-----GSKSIKFLKRTLSLSDNSV 61

Query: 64  -ESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 123
            E+    VPKGYLAVSVGEEQKRF+IPT+YL H AF +LLREAEEEFGFQQ GVLR+PCE
Sbjct: 62  REASSNTVPKGYLAVSVGEEQKRFIIPTEYLSHHAFHLLLREAEEEFGFQQAGVLRIPCE 121

Query: 124 VTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR 170
           V++FE++VK+VEEKK    L   +E L +C+ E+ Q TPSH PQSP+CR
Sbjct: 122 VSIFESIVKMVEEKKD---LFFMQESLGYCASES-QRTPSHHPQSPLCR 161

[Close]

BLAST of Cla009987 vs. TrEMBL
Match: A0A067KMA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06991 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-49
Identity = 109/170 (64.12%), Postives = 129/170 (75.88%), Query Frame = 1


Query: 4   NSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLS---SAG 63
           +SKKSNKI +IVRLQQILKKWRKLANSSK     +   +  + KSIKFL+RTLS   ++ 
Sbjct: 2   DSKKSNKITEIVRLQQILKKWRKLANSSKAKANTNTNTSNGSSKSIKFLRRTLSLSETSS 61

Query: 64  GESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 123
             +   AVPKGYLA+ VGEE KRF+IPT+YLGHPAF  LLREAEEEFGFQQTGVLR+PCE
Sbjct: 62  QSTPSNAVPKGYLAICVGEELKRFIIPTEYLGHPAFHFLLREAEEEFGFQQTGVLRIPCE 121

Query: 124 VTVFENVVKLVEEKKKGDLLLGGEEV-LSFCSLETLQLTPSHRPQSPMCR 170
           V VFE+++KLVEE K  D+    + V L+ CS +  Q TPSH PQSPMCR
Sbjct: 122 VAVFESILKLVEENK--DVYFTQDSVGLAHCSSKNHQ-TPSHHPQSPMCR 168

[Close]

BLAST of Cla009987 vs. TrEMBL
Match: G7I561_MEDTR (SAUR-like auxin-responsive family protein OS=Medicago truncatula GN=MTR_1g009150 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-47
Identity = 109/183 (59.56%), Postives = 132/183 (72.13%), Query Frame = 1


Query: 1   MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSA- 60
           M  + KKSNKIR+IVRLQQILKKWRK+ANSSKT    + T      KS+KFLKRTLS + 
Sbjct: 1   MSMDQKKSNKIREIVRLQQILKKWRKIANSSKTT---ANTTTITRSKSMKFLKRTLSLSE 60

Query: 61  --GGESCG---GAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGV 120
             GG +     G+VPKGYLAV VGEE KRF+IPT+YLGH AF+ILLREAEEEFGFQQ GV
Sbjct: 61  REGGTTSSNNNGSVPKGYLAVCVGEELKRFIIPTEYLGHQAFQILLREAEEEFGFQQAGV 120

Query: 121 LRLPCEVTVFENVVKLVEEKKKGD--------LLLGGEEVLSFCSLETLQLTPSHRPQSP 170
           LR+PCEV+ FE+++K+VE+  K            +  EE++ +CSLE  QL  SH PQSP
Sbjct: 121 LRIPCEVSTFESILKMVEDHGKNKDKFSNQECRSISIEEMMGYCSLEN-QLACSHHPQSP 179

[Close]

BLAST of Cla009987 vs. NCBI nr
Match: gi|659132571|ref|XP_008466269.1| (PREDICTED: uncharacterized protein LOC103503729 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 2.3e-84
Identity = 163/170 (95.88%), Postives = 165/170 (97.06%), Query Frame = 1


Query: 1   MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAG 60
           MD NSKKSNKIRDIVRLQQILKKWRKLANSSK ANKI+GTAAGPAGKSIKFLKRTLSSAG
Sbjct: 1   MDLNSKKSNKIRDIVRLQQILKKWRKLANSSKAANKITGTAAGPAGKSIKFLKRTLSSAG 60

Query: 61  GESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 120
           GESCGGAVPKGYLAVSVGEEQKRFVIPT YLGHPAFEILLREAEEEFGFQQTGVLRLPCE
Sbjct: 61  GESCGGAVPKGYLAVSVGEEQKRFVIPTSYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 120

Query: 121 VTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTP-SHRPQSPMCR 170
           V VFENVVKLVEEKKKGDLLLGGEEVL+FCSLETLQLTP SHRPQSPMCR
Sbjct: 121 VFVFENVVKLVEEKKKGDLLLGGEEVLNFCSLETLQLTPSSHRPQSPMCR 170

[Close]

BLAST of Cla009987 vs. NCBI nr
Match: gi|449437046|ref|XP_004136303.1| (PREDICTED: auxin-induced protein 6B [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.3e-79
Identity = 158/170 (92.94%), Postives = 162/170 (95.29%), Query Frame = 1


Query: 1   MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAG 60
           MDSN+KKSNKIRDIVRLQQILKKWRKLANSSKTANKI+GTAAGPAGKSIKFLKRTLSSAG
Sbjct: 1   MDSNAKKSNKIRDIVRLQQILKKWRKLANSSKTANKITGTAAGPAGKSIKFLKRTLSSAG 60

Query: 61  GESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 120
           GE     VPKGYLAVSVGEEQKRFVIPT YLGHPAFEILLREAEEEFGFQQTGVLRLPCE
Sbjct: 61  GE-----VPKGYLAVSVGEEQKRFVIPTSYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 120

Query: 121 VTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTP-SHRPQSPMCR 170
           V VFENVVKLVEEKKKGDLLLGGEEVL+FCSLE+LQLTP SHRPQSPMCR
Sbjct: 121 VFVFENVVKLVEEKKKGDLLLGGEEVLNFCSLESLQLTPSSHRPQSPMCR 165

[Close]

BLAST of Cla009987 vs. NCBI nr
Match: gi|743925015|ref|XP_011006641.1| (PREDICTED: uncharacterized protein LOC105112603 [Populus euphratica])

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50
Identity = 112/173 (64.74%), Postives = 132/173 (76.30%), Query Frame = 1


Query: 4   NSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLS---SAG 63
           +SKKSNKIRDIVRLQQILKKWRKLA+SSKT    S  +   + KS+KFLKRTLS   ++ 
Sbjct: 2   DSKKSNKIRDIVRLQQILKKWRKLASSSKT----SAVSTTTSSKSMKFLKRTLSISDNSA 61

Query: 64  GESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 123
            E+   AVPKGYLAV VGEEQKRF+IPT YL HPAF +LLREAEEEFGFQQ GVLR+PCE
Sbjct: 62  KETSSNAVPKGYLAVGVGEEQKRFIIPTDYLSHPAFLVLLREAEEEFGFQQAGVLRIPCE 121

Query: 124 VTVFENVVKLVEEKK----KGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR 170
           V VFE+++KLVEEKK      +  L  + +  +CS ++ Q TPSH PQSPMCR
Sbjct: 122 VAVFESILKLVEEKKDLFFMQECRLDVDNIAVYCSSKS-QQTPSHHPQSPMCR 169

[Close]

BLAST of Cla009987 vs. NCBI nr
Match: gi|566178776|ref|XP_006382198.1| (auxin-responsive family protein [Populus trichocarpa])

HSP 1 Score: 206.5 bits (524), Expect = 3.8e-50
Identity = 112/173 (64.74%), Postives = 134/173 (77.46%), Query Frame = 1


Query: 4   NSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLS---SAG 63
           +SKKSNKIRDIVRLQQILKKWRKLA+SS+T    + T++    KS+KFLKRTLS   ++ 
Sbjct: 2   DSKKSNKIRDIVRLQQILKKWRKLASSSRTTAASTTTSS----KSMKFLKRTLSIPENSA 61

Query: 64  GESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 123
            E+   AVPKGYLAV VGEEQKRF+IPT+YL HPAF ILLREAEEEFGFQQ GVLR+PCE
Sbjct: 62  KETSSNAVPKGYLAVGVGEEQKRFIIPTEYLSHPAFLILLREAEEEFGFQQAGVLRIPCE 121

Query: 124 VTVFENVVKLVEEKK----KGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR 170
           V VFE+++KLVEEKK      +  L  + +  +CS ++ Q TPSH PQSPMCR
Sbjct: 122 VAVFESILKLVEEKKDLFFMQECRLDVDNIAVYCSSKS-QQTPSHHPQSPMCR 169

[Close]

BLAST of Cla009987 vs. NCBI nr
Match: gi|590571195|ref|XP_007011526.1| (SAUR family protein [Theobroma cacao])

HSP 1 Score: 204.5 bits (519), Expect = 1.4e-49
Identity = 108/169 (63.91%), Postives = 132/169 (78.11%), Query Frame = 1


Query: 4   NSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAGG-- 63
           +S+KSNKIR+IVRLQQILKKWRKLAN+SK+++  +        KSIKFLKRTLS +    
Sbjct: 2   DSRKSNKIREIVRLQQILKKWRKLANTSKSSSNCNS-----GSKSIKFLKRTLSLSDNSV 61

Query: 64  -ESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCE 123
            E+    VPKGYLAVSVGEEQKRF+IPT+YL H AF +LLREAEEEFGFQQ GVLR+PCE
Sbjct: 62  REASSNTVPKGYLAVSVGEEQKRFIIPTEYLSHHAFHLLLREAEEEFGFQQAGVLRIPCE 121

Query: 124 VTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR 170
           V++FE++VK+VEEKK    L   +E L +C+ E+ Q TPSH PQSP+CR
Sbjct: 122 VSIFESIVKMVEEKKD---LFFMQESLGYCASES-QRTPSHHPQSPLCR 161

The following BLAST results are available for this feature:

BLAST of Cla009987 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU72_ARATH	8.2e-13	30.97	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1	[more]
SAU40_ARATH	1.1e-12	31.16	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1	[more]
SAU32_ARATH	3.1e-12	47.89	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1	[more]
SAU71_ARATH	9.1e-12	46.77	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1	[more]
AXX15_SOYBN	2.6e-11	55.00	Auxin-induced protein X15 OS=Glycine max PE=2 SV=1	[more]

BLAST of Cla009987 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHH5_CUCSA	9.3e-80	92.94	SAUR family protein OS=Cucumis sativus GN=Csa_3G883020 PE=4 SV=1	[more]
B9N6C6_POPTR	2.6e-50	64.74	Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0006s29280g PE=4...	[more]
A0A061GH12_THECC	1.0e-49	63.91	SAUR family protein OS=Theobroma cacao GN=TCM_036780 PE=4 SV=1	[more]
A0A067KMA1_JATCU	3.8e-49	64.12	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06991 PE=4 SV=1	[more]
G7I561_MEDTR	1.6e-47	59.56	SAUR-like auxin-responsive family protein OS=Medicago truncatula GN=MTR_1g009150...	[more]

BLAST of Cla009987 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132571\|ref\|XP_008466269.1\|	2.3e-84	95.88	PREDICTED: uncharacterized protein LOC103503729 [Cucumis melo]	[more]
gi\|449437046\|ref\|XP_004136303.1\|	1.3e-79	92.94	PREDICTED: auxin-induced protein 6B [Cucumis sativus]	[more]
gi\|743925015\|ref\|XP_011006641.1\|	2.2e-50	64.74	PREDICTED: uncharacterized protein LOC105112603 [Populus euphratica]	[more]
gi\|566178776\|ref\|XP_006382198.1\|	3.8e-50	64.74	auxin-responsive family protein [Populus trichocarpa]	[more]
gi\|590571195\|ref\|XP_007011526.1\|	1.4e-49	63.91	SAUR family protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0006024	glycosaminoglycan biosynthetic process
biological_process	GO:0015012	heparan sulfate proteoglycan biosynthetic process
biological_process	GO:0009117	nucleotide metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0009702	L-arabinokinase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009987	Cla009987.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..130 score: 7.5
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 5..139 score: 2.0
None	No IPR available	PANTHER	PTHR31374:SF7	AUXIN INDUCED LIKE-PROTEIN	coord: 5..139 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009987	Cla97C05G108540	Watermelon (97103) v2	wmwmbB207
Cla009987	Csa3G883020	Cucumber (Chinese Long) v2	cuwmB251
Cla009987	MELO3C003599	Melon (DHL92) v3.5.1	mewmB370
Cla009987	ClCG05G026300	Watermelon (Charleston Gray)	wcgwmB285
Cla009987	CSPI03G44870	Wild cucumber (PI 183967)	cpiwmB250
Cla009987	Cucsa.311240	Cucumber (Gy14) v1	cgywmB570
Cla009987	CmaCh09G005430	Cucurbita maxima (Rimu)	cmawmB031
Cla009987	CmaCh01G015890	Cucurbita maxima (Rimu)	cmawmB445
Cla009987	CmoCh09G005320	Cucurbita moschata (Rifu)	cmowmB023
Cla009987	CmoCh01G016370	Cucurbita moschata (Rifu)	cmowmB438
Cla009987	Lsi04G022130	Bottle gourd (USVL1VR-Ls)	lsiwmB321
Cla009987	Cp4.1LG02g04830	Cucurbita pepo (Zucchini)	cpewmB564
Cla009987	Cp4.1LG06g04420	Cucurbita pepo (Zucchini)	cpewmB770
Cla009987	CsGy3G042360	Cucumber (Gy14) v2	cgybwmB236
Cla009987	MELO3C003599.2	Melon (DHL92) v3.6.1	medwmB366
Cla009987	Carg21189	Silver-seed gourd	carwmB0550
Cla009987	Carg02954	Silver-seed gourd	carwmB0632
Cla009987	CsaV3_3G047300	Cucumber (Chinese Long) v3	cucwmB259
Cla009987	Bhi09G002035	Wax gourd	wgowmB627

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None