Cla009193 (gene) Watermelon (97103) v1

NameCla009193
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 24292221 .. 24292514 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAACCAGAAGAGCTCACGTTGAGGGACCTCTTCACCCCTCATGTTGATCAACAGCCTCTATGCATCACCCATCCCACCACTATAGGTAATTTCGAGCTTAAGTCGAGACTGATTCGCTTACTTTCTTCCTTTTCTAGTCGTGCAGGTGAAGATTCACTTAGTAGTGCTCCCTGTGTTCGACCCAGCCTTGCCACTGCTATAGTTTTGGTAAGCACGAAAAATTATTTGGCATGGAATTGGACGACGAATTTCATCTGCCACATTCGCAGCAGCGAGCACCATCGGTAA

mRNA sequence

ATGGAGCAACCAGAAGAGCTCACGTTGAGGGACCTCTTCACCCCTCATGTTGATCAACAGCCTCTATGCATCACCCATCCCACCACTATAGGTAATTTCGAGCTTAAGTCGAGACTGATTCGCTTACTTTCTTCCTTTTCTAGTCGTGCAGGTGAAGATTCACTTAGTAGTGCTCCCTGTGTTCGACCCAGCCTTGCCACTGCTATAGTTTTGGTAAGCACGAAAAATTATTTGGCATGGAATTGGACGACGAATTTCATCTGCCACATTCGCAGCAGCGAGCACCATCGGTAA

Coding sequence (CDS)

ATGGAGCAACCAGAAGAGCTCACGTTGAGGGACCTCTTCACCCCTCATGTTGATCAACAGCCTCTATGCATCACCCATCCCACCACTATAGGTAATTTCGAGCTTAAGTCGAGACTGATTCGCTTACTTTCTTCCTTTTCTAGTCGTGCAGGTGAAGATTCACTTAGTAGTGCTCCCTGTGTTCGACCCAGCCTTGCCACTGCTATAGTTTTGGTAAGCACGAAAAATTATTTGGCATGGAATTGGACGACGAATTTCATCTGCCACATTCGCAGCAGCGAGCACCATCGGTAA

Protein sequence

MEQPEELTLRDLFTPHVDQQPLCITHPTTIGNFELKSRLIRLLSSFSSRAGEDSLSSAPCVRPSLATAIVLVSTKNYLAWNWTTNFICHIRSSEHHR
BLAST of Cla009193 vs. NCBI nr
Match: gi|985470763|ref|XP_015381067.1| (PREDICTED: uncharacterized protein LOC107174570 [Citrus sinensis])

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-06
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 1

Query: 1  MEQPEELTLRDLFTPHVDQQPLCITHPTTIGNFELKSRLIRLLSSFSSRAGED 54
          M Q    TL++L  P++DQQPLCI +P    NFELKSR+I LL +F   AGED
Sbjct: 1  MAQNNNRTLKELAAPNLDQQPLCIENPNPQVNFELKSRMIHLLPTFHVLAGED 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|985470763|ref|XP_015381067.1|7.3e-0654.72PREDICTED: uncharacterized protein LOC107174570 [Citrus sinensis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla009193Cla009193.1mRNA