BLAST of Cla009159 vs. Swiss-Prot
Match:
RAD4_ARATH (DNA repair protein RAD4 OS=Arabidopsis thaliana GN=RAD4 PE=1 SV=1)
HSP 1 Score: 493.8 bits (1270), Expect = 2.9e-138
Identity = 292/637 (45.84%), Postives = 375/637 (58.87%), Query Frame = 1
Query: 20 KKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCNSKPDIPETFPPNNSQVPKR 79
+K L D + NAVN SSC + I S +R
Sbjct: 310 EKPQLGNPLGSDQVQDNAVN-----------------SSCEAGMSI-------KSDGTRR 369
Query: 80 KGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSPKKLKRI--VNEESASSSHG 139
KGDVEFE Q+ MALSATA +SS +N + KK++ I ++ S+ S
Sbjct: 370 KGDVEFERQIAMALSATADNQ--QSSQVN----------NTKKVREITKISNSSSVSDQV 429
Query: 140 ISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYV 199
ISTA GS K SPL W EVYCN EN+ GKWVHVDAVN ++D E +E AAACKT LRYV
Sbjct: 430 ISTAFGSKKVDSPLCWLEVYCNGENMDGKWVHVDAVNGMIDAEQNIEAAAAACKTVLRYV 489
Query: 200 VAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEGQVVGGSGHLEKSCIDG 259
VAF+ GAKDVTRRYC KW+ I +KRV+++WWD VLAPL LE G+ H E +
Sbjct: 490 VAFAAGGAKDVTRRYCTKWHTISSKRVSSVWWDMVLAPLVHLE----SGATHDEDIALRN 549
Query: 260 L--MEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDRDCSMGNQFVATRDHL 319
+ + S S + ++ L+D ++ ++E L T++ A + H
Sbjct: 550 FNGLNPVSSRASSSSSSFGIRSALEDMELATRA---LTESLPTNQQ--------AYKSH- 609
Query: 320 EDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCV 379
E A+ + L NQ + + LGFCSGHPVYPRTCV
Sbjct: 610 -----EIYAIEKWLHKNQILHPKGPV-------------------LGFCSGHPVYPRTCV 669
Query: 380 QMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQGDSQGVIPLYGKWQL 439
Q LKTK++WLR+GLQ+K+NE+P+K LKR+ K KV + E D + + LYGKWQ+
Sbjct: 670 QTLKTKERWLRDGLQLKANEVPSKILKRNSKFKKVKDFEDGDNNIKGGSSCMELYGKWQM 729
Query: 440 EPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFE 499
EPL LP A+NGIVPKNERGQVDVWSEKCLPPGTVH+R PR+F+VAKR IDYAPAMVGFE
Sbjct: 730 EPLCLPPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPRIFAVAKRFGIDYAPAMVGFE 789
Query: 500 FRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQLLSSILTR 559
+R+G + PI++GIVVC+EFKD ILEAY EE E+ E EERR E QA SRWYQLLSSILTR
Sbjct: 790 YRSGGATPIFEGIVVCTEFKDTILEAYAEEQEKKEEEERRRNEAQAASRWYQLLSSILTR 849
Query: 560 QRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNN 619
+RL +RY ++ N ++ S + + + ++ P K + S N
Sbjct: 850 ERLKNRYANNSNDVEAKS-----LEVNSETVVKAKNVKAPEKQRVAKRGEKSRVRKSRNE 865
Query: 620 QEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
E H+HVFL E++ DE++ V TKRC CGFSV+VE++
Sbjct: 910 DESHEHVFLDEEETFDEETSVKTKRCKCGFSVEVEQM 865
BLAST of Cla009159 vs. Swiss-Prot
Match:
XPC_HUMAN (DNA repair protein complementing XP-C cells OS=Homo sapiens GN=XPC PE=1 SV=4)
HSP 1 Score: 194.5 bits (493), Expect = 3.6e-48
Identity = 102/286 (35.66%), Postives = 158/286 (55.24%), Query Frame = 1
Query: 312 RDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK-GPVLGFCSGHPVY 371
R+ ED+E + + + +PLPT YKNH LYAL++ L KY+ ++P+ +LG+C G VY
Sbjct: 617 REKKEDLEFQAKHMDQPLPTAIGLYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVY 676
Query: 372 PRTCVQMLKTKQKWLREGLQVKSNELPAKELK---RSIKKIKVLESEADDFDQGDSQGVI 431
R CV L ++ WL++ V+ E+P K +K +K ++ E + + + +
Sbjct: 677 SRDCVHTLHSRDTWLKKARVVRLGEVPYKMVKGFSNRARKARLAEPQLRE------ENDL 736
Query: 432 PLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDY 491
L+G WQ E Q P A++G VP+NE G V ++ +P G V + LP + VA++L+ID
Sbjct: 737 GLFGYWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQLNLPNLHRVARKLDIDC 796
Query: 492 APAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQ 551
A+ GF+F G S+P+ DG +VC EFKDV+L A+ E +E +E+ +EK+A+ W
Sbjct: 797 VQAITGFDFHGGYSHPVTDGYIVCEEFKDVLLTAWENEQAVIERKEKEKKEKRALGNWKL 856
Query: 552 LLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDA 594
L +L R+RL RYG +D G + S Q +A
Sbjct: 857 LAKGLLIRERLKRRYGPKSEAAAPHTDAGGGLSSDEEEGTSSQAEA 896
BLAST of Cla009159 vs. Swiss-Prot
Match:
XPC_MOUSE (DNA repair protein complementing XP-C cells homolog OS=Mus musculus GN=Xpc PE=1 SV=2)
HSP 1 Score: 192.6 bits (488), Expect = 1.4e-47
Identity = 102/254 (40.16%), Postives = 148/254 (58.27%), Query Frame = 1
Query: 312 RDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK-GPVLGFCSGHPVY 371
R+ ED E + + L +PLPT+ YKNH LYAL++ L K+Q ++P+ VLG+C G VY
Sbjct: 610 REKKEDQEFQAKHLDQPLPTSISTYKNHPLYALKRHLLKFQAIYPETAAVLGYCRGEAVY 669
Query: 372 PRTCVQMLKTKQKWLREGLQVKSNELPAKELKR-SIKKIKVLESEADDFDQGDSQGVIPL 431
R CV L ++ WL++ V+ E+P K +K S + K SE D D + L
Sbjct: 670 SRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKARLSEPQLHDHND----LGL 729
Query: 432 YGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAP 491
YG WQ E Q P A++G VP+NE G V ++ +P G V + LP + VA++L ID
Sbjct: 730 YGHWQTEEYQPPIAVDGKVPRNEFGNVYLFLPSMMPVGCVQMTLPNLNRVARKLGIDCVQ 789
Query: 492 AMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQLL 551
A+ GF+F G +P+ DG +VC EF+DV+L A+ E +E +E+ +EK+A+ W L+
Sbjct: 790 AITGFDFHGGYCHPVTDGYIVCEEFRDVLLAAWENEQAIIEKKEKEKKEKRALGNWKLLV 849
Query: 552 SSILTRQRLSSRYG 564
+L R+RL RYG
Sbjct: 850 RGLLIRERLKLRYG 859
BLAST of Cla009159 vs. Swiss-Prot
Match:
XPC_DROME (DNA repair protein complementing XP-C cells homolog OS=Drosophila melanogaster GN=Xpc PE=1 SV=2)
HSP 1 Score: 177.6 bits (449), Expect = 4.5e-43
Identity = 92/252 (36.51%), Postives = 140/252 (55.56%), Query Frame = 1
Query: 312 RDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK-GPVLGFCSGHPVY 371
RD ED +L +PLP + +K+H LY LE+ L K+Q L+P P LGF G VY
Sbjct: 1047 RDITEDDQLRRIHSDKPLPKSISEFKDHPLYVLERHLLKFQGLYPPDAPTLGFIRGEAVY 1106
Query: 372 PRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQGDSQGVIPLY 431
R CV +L +++ WL+ VK E P K +K K ++ + D + ++
Sbjct: 1107 SRDCVHLLHSREIWLKSARVVKLGEQPYKVVKARPKWDRLTRTVIKDQP-------LEIF 1166
Query: 432 GKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPA 491
G WQ + + P A NGIVP+N G V+++ + LP TVH+RLP + + K+L ID A A
Sbjct: 1167 GYWQTQEYEPPTAENGIVPRNAYGNVELFKDCMLPKKTVHLRLPGLMRICKKLNIDCANA 1226
Query: 492 MVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQLLS 551
+VGF+F G +P+YDG +VC EF++V+ A+ E+ + +E+ E + W +L+
Sbjct: 1227 VVGFDFHQGACHPMYDGFIVCEEFREVVTAAWEEDQQVQVLKEQEKYETRVYGNWKKLIK 1286
Query: 552 SILTRQRLSSRY 563
+L R+RL +Y
Sbjct: 1287 GLLIRERLKKKY 1291
BLAST of Cla009159 vs. Swiss-Prot
Match:
RHP41_SCHPO (DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rhp41 PE=3 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 2.3e-23
Identity = 83/260 (31.92%), Postives = 117/260 (45.00%), Query Frame = 1
Query: 308 FVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK---GPVLGFC 367
F D +ED EL +E +P N Q K+H L+ LE+ L K Q + G +
Sbjct: 399 FYNDMDAIEDAELLRLEQSEGIPRNIQDLKDHPLFVLERHLKKNQAIKTGKSCGRINTKN 458
Query: 368 SGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQGDSQ 427
VYPR V + + W R+G +K P K +K K
Sbjct: 459 GVELVYPRKYVSNGFSAEHWYRKGRIIKPGAQPLKHVKNGDK------------------ 518
Query: 428 GVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLE 487
V+PLY + + + IVPKN G +D++ LP G H R + AK LE
Sbjct: 519 -VLPLYDEEATQLYTPKPVVANIVPKNAYGNIDLYVPSMLPYGAYHCRKRCALAAAKFLE 578
Query: 488 IDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVI-LEAYNEEAERMEAEERRHREKQAIS 547
IDYA A+VGF+F+ S P +G+VV +++ I L A + E EAE R R K +
Sbjct: 579 IDYAKAVVGFDFQRKYSKPKLEGVVVSKRYEEAIDLIAEEIDQEEKEAEARNVR-KTCLL 638
Query: 548 RWYQLLSSILTRQRLSSRYG 564
W +L++ + RQR+ YG
Sbjct: 639 LWKRLITGLRIRQRVFEEYG 638
HSP 2 Score: 43.1 bits (100), Expect = 1.3e-02
Identity = 27/78 (34.62%), Postives = 36/78 (46.15%), Query Frame = 1
Query: 150 PLYWAEVYCNAENLTGKWVHVDAVN--MVVDGEHKVEDLAAACKTSLRYVVAFSGLG-AK 209
P++W E + A KWV VD V+ + E ++ + YV A G K
Sbjct: 302 PVFWVEAFNKAMQ---KWVCVDPFGDASVIGKYRRFEPASSDHLNQMTYVFAIEANGYVK 361
Query: 210 DVTRRYCMKWYKIETKRV 225
DVTR+YC+ +YKI RV
Sbjct: 362 DVTRKYCLHYYKILKNRV 376
BLAST of Cla009159 vs. TrEMBL
Match:
A0A0A0KQC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G424880 PE=4 SV=1)
HSP 1 Score: 1161.0 bits (3002), Expect = 0.0e+00
Identity = 577/652 (88.50%), Postives = 601/652 (92.18%), Query Frame = 1
Query: 1 MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
MVDK E VDKDSLTSRC DKKDN K TSGDN E NAVNL KK HVL+ L+ T SSSCN
Sbjct: 326 MVDKAEAVDKDSLTSRCLDKKDNPRKRTSGDNRESNAVNLVGKKTHVLNALSSTGSSSCN 385
Query: 61 SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
SKPDI ETFPP NSQV KRKGD+EFEMQLQMALSATAVETMP +SSIN+ NEPPLNFP
Sbjct: 386 SKPDISETFPPKNSQVQKRKGDIEFEMQLQMALSATAVETMPSNSSINHLNEPPLNFPPS 445
Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
KKLKRIVNEESASS HGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 446 KKLKRIVNEESASS-HGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 505
Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 506 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 565
Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
GQ V G+GHLEK CID LMEQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGL TDR
Sbjct: 566 GQAVRGTGHLEKCCIDDLMEQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLVTDR 625
Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
D S+GNQ VATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 626 DFSLGNQ-VATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 685
Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
LGFCSG+PVYPRTCVQ+LKTK KWLREGLQV+SNELP KELKRSIKKIK+LESEADDFDQ
Sbjct: 686 LGFCSGYPVYPRTCVQVLKTKHKWLREGLQVRSNELPVKELKRSIKKIKILESEADDFDQ 745
Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA 480
GDSQG IPLYGKWQLEPLQLPRA++GIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA
Sbjct: 746 GDSQGTIPLYGKWQLEPLQLPRAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA 805
Query: 481 KRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQ 540
K+LEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILE YNEEAERMEAEERR REKQ
Sbjct: 806 KKLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRLREKQ 865
Query: 541 AISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLHQ 600
AISRWYQLLSSI+TRQRL+SRYGDSEN QV SD+R HD+ NAD+PSCQ+D EPFK
Sbjct: 866 AISRWYQLLSSIITRQRLNSRYGDSENLSQVTSDIRNMHDERNADVPSCQEDVEPFKGQP 925
Query: 601 DNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
DN+SNTN+DAPSF NQ DHKHVFLLEDQI DEKSLVVTKRC CGFSVQVEEL
Sbjct: 926 DNLSNTNMDAPSFINQ-DHKHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 974
BLAST of Cla009159 vs. TrEMBL
Match:
A0A061ENL1_THECC (DNA repair protein xp-C / rad4, putative isoform 1 OS=Theobroma cacao GN=TCM_019127 PE=4 SV=1)
HSP 1 Score: 722.6 bits (1864), Expect = 4.2e-205
Identity = 384/653 (58.81%), Postives = 472/653 (72.28%), Query Frame = 1
Query: 10 KDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSS--SCNSKPDIPE 69
++SL S C+ K TS D R + +DE+T TS+ +C ++ D
Sbjct: 335 ENSLRSSCKSKGGC---PTSNDTQSRYST--------AVDEVTDRTSNLFACQAQLDTYG 394
Query: 70 TFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRS------SSINYSNEPPLNFPSPK 129
P SQ KRKGD+EFEMQL MA+SAT V T+ S S+ N +N + PS K
Sbjct: 395 QCAPTKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPS-K 454
Query: 130 KLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 189
+ K+I ESA+SS G+STA+GS K GSPL+WAEVYC ENLTGKWVHVDA+N ++DGE
Sbjct: 455 RWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNAIIDGEQ 514
Query: 190 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEG 249
KVED AAACKT+LRYVVAF+G GAKDVTRRYCMKWYKI KRVN++WWD VLAPLR LE
Sbjct: 515 KVEDAAAACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKRVNSIWWDAVLAPLRELES 574
Query: 250 QVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSE--GLDTD 309
GG+ ++EK + EQ+K+K S +S+ + + P KS + G ++
Sbjct: 575 GATGGTINMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVILPEKSGQEAFKEYGSKSE 634
Query: 310 RDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGP 369
+ S + VATR+ LED+ELETRALTEPLPTNQQAYKNH LYALE+WLTK Q+LHP+GP
Sbjct: 635 VESSTKHSLVATRNSLEDMELETRALTEPLPTNQQAYKNHALYALERWLTKCQILHPRGP 694
Query: 370 VLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFD 429
+LG+CSGHPVYPRTCVQ LK +++WLREGLQVK NE+PAK LKRS K KV SE DD++
Sbjct: 695 ILGYCSGHPVYPRTCVQTLKPRERWLREGLQVKGNEIPAKVLKRSAKLKKVQVSEEDDYE 754
Query: 430 QGDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSV 489
+ DS+G I LYGKWQLEPL LP A++GIVPKNERGQVDVWSEKCLPPGTVH+RLPRVFSV
Sbjct: 755 EIDSKGTIELYGKWQLEPLCLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFSV 814
Query: 490 AKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREK 549
AKRLEIDYAPAMVGFEFRNGR+ PI+DGIVVCSEFKD ILEAY EE ER AEE++ E
Sbjct: 815 AKRLEIDYAPAMVGFEFRNGRAAPIFDGIVVCSEFKDAILEAYAEEEERRVAEEKKRNEA 874
Query: 550 QAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLH 609
QAISRWYQLLSSI+TRQ+L S YGD + Q + +++ +++ NA S +DD + L
Sbjct: 875 QAISRWYQLLSSIITRQKLKSYYGDGSSS-QASRNIQDKNNEINAPDESSKDDRQSTGLW 934
Query: 610 QDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
+ + +T + PS EDH+HVFL E++ D ++ V TKRC CGFS+QVEEL
Sbjct: 935 KGDGEDTLCNIPSGTLVEDHEHVFLRENESFDAENSVRTKRCHCGFSIQVEEL 974
BLAST of Cla009159 vs. TrEMBL
Match:
A0A061EFW6_THECC (DNA repair protein xp-C / rad4, putative isoform 2 OS=Theobroma cacao GN=TCM_019127 PE=4 SV=1)
HSP 1 Score: 722.6 bits (1864), Expect = 4.2e-205
Identity = 384/653 (58.81%), Postives = 472/653 (72.28%), Query Frame = 1
Query: 10 KDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSS--SCNSKPDIPE 69
++SL S C+ K TS D R + +DE+T TS+ +C ++ D
Sbjct: 269 ENSLRSSCKSKGGC---PTSNDTQSRYST--------AVDEVTDRTSNLFACQAQLDTYG 328
Query: 70 TFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRS------SSINYSNEPPLNFPSPK 129
P SQ KRKGD+EFEMQL MA+SAT V T+ S S+ N +N + PS K
Sbjct: 329 QCAPTKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPS-K 388
Query: 130 KLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 189
+ K+I ESA+SS G+STA+GS K GSPL+WAEVYC ENLTGKWVHVDA+N ++DGE
Sbjct: 389 RWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNAIIDGEQ 448
Query: 190 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEG 249
KVED AAACKT+LRYVVAF+G GAKDVTRRYCMKWYKI KRVN++WWD VLAPLR LE
Sbjct: 449 KVEDAAAACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKRVNSIWWDAVLAPLRELES 508
Query: 250 QVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSE--GLDTD 309
GG+ ++EK + EQ+K+K S +S+ + + P KS + G ++
Sbjct: 509 GATGGTINMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVILPEKSGQEAFKEYGSKSE 568
Query: 310 RDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGP 369
+ S + VATR+ LED+ELETRALTEPLPTNQQAYKNH LYALE+WLTK Q+LHP+GP
Sbjct: 569 VESSTKHSLVATRNSLEDMELETRALTEPLPTNQQAYKNHALYALERWLTKCQILHPRGP 628
Query: 370 VLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFD 429
+LG+CSGHPVYPRTCVQ LK +++WLREGLQVK NE+PAK LKRS K KV SE DD++
Sbjct: 629 ILGYCSGHPVYPRTCVQTLKPRERWLREGLQVKGNEIPAKVLKRSAKLKKVQVSEEDDYE 688
Query: 430 QGDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSV 489
+ DS+G I LYGKWQLEPL LP A++GIVPKNERGQVDVWSEKCLPPGTVH+RLPRVFSV
Sbjct: 689 EIDSKGTIELYGKWQLEPLCLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFSV 748
Query: 490 AKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREK 549
AKRLEIDYAPAMVGFEFRNGR+ PI+DGIVVCSEFKD ILEAY EE ER AEE++ E
Sbjct: 749 AKRLEIDYAPAMVGFEFRNGRAAPIFDGIVVCSEFKDAILEAYAEEEERRVAEEKKRNEA 808
Query: 550 QAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLH 609
QAISRWYQLLSSI+TRQ+L S YGD + Q + +++ +++ NA S +DD + L
Sbjct: 809 QAISRWYQLLSSIITRQKLKSYYGDGSSS-QASRNIQDKNNEINAPDESSKDDRQSTGLW 868
Query: 610 QDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
+ + +T + PS EDH+HVFL E++ D ++ V TKRC CGFS+QVEEL
Sbjct: 869 KGDGEDTLCNIPSGTLVEDHEHVFLRENESFDAENSVRTKRCHCGFSIQVEEL 908
BLAST of Cla009159 vs. TrEMBL
Match:
W9S159_9ROSA (DNA repair protein complementing XP-C cell OS=Morus notabilis GN=L484_027190 PE=4 SV=1)
HSP 1 Score: 709.5 bits (1830), Expect = 3.7e-201
Identity = 374/658 (56.84%), Postives = 466/658 (70.82%), Query Frame = 1
Query: 7 PVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCNSKPDIP 66
P +KDS + S D+ N + ++ ++ EL +S +C+++
Sbjct: 323 PNEKDSACETSHRSSCKRSNAESKDSASANESS-NKQPCPLVFELKHDSSGACHTQI--- 382
Query: 67 ETFPPNNSQVPKRKGDVEFEMQLQMALSATA-----VETMPRSSSINYSNEPPLNFPSPK 126
SQ PKRKGD+EF +Q++MA+SATA + SS+ N NF SP
Sbjct: 383 -------SQGPKRKGDIEFSLQMEMAISATAAVIANIADGKMGSSMGNPNSNLPNFISPF 442
Query: 127 KLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 186
K + V E +SSSHGISTA+GS + GSPLYWAEVYC+ ENLTGKWVHVDAVN ++D E
Sbjct: 443 KRMKKVLSEGSSSSHGISTAIGSRRVGSPLYWAEVYCSGENLTGKWVHVDAVNAIIDEEE 502
Query: 187 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEG 246
KVE LAAACK SLRYVVAF+G GAKDVTRRYCMKWYKI +KRVN++WWD+VLAPL+ +E
Sbjct: 503 KVEALAAACKRSLRYVVAFAGNGAKDVTRRYCMKWYKIASKRVNSIWWDSVLAPLKEIES 562
Query: 247 QVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSE--GLDTD 306
+ G HLE ID + D K +++NLK +N ++ G S VS+ G+ TD
Sbjct: 563 RATNGMFHLENDNIDASFKHDNPK--HIAENLKAENFPNNATLLGSSGLEVSKVCGVKTD 622
Query: 307 RDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGP 366
S+ A+R LED+ELETRALTEPLPTNQQAY+ H+LYA+EKWL KYQ+LHP+GP
Sbjct: 623 MGSSLT---AASRSSLEDMELETRALTEPLPTNQQAYRTHQLYAIEKWLNKYQILHPRGP 682
Query: 367 VLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFD 426
+LGFC+GH VYPRTCVQ LKTK++WLREGLQVK++ELP KELKRS K++ L+S DD
Sbjct: 683 ILGFCAGHAVYPRTCVQTLKTKERWLREGLQVKASELPVKELKRS-GKLQKLKSFEDDES 742
Query: 427 QGD-SQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFS 486
GD S+G + LYGKWQLEPLQLP A+NGIVPKNERGQVDVWSEKCLPPGT H+RLPRVFS
Sbjct: 743 VGDNSEGTLKLYGKWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTAHLRLPRVFS 802
Query: 487 VAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHRE 546
VAKRLEIDYAPAMVGFE++NG+SYP+++GIVVC+EFKDVILEAY EE ER EAEE++ E
Sbjct: 803 VAKRLEIDYAPAMVGFEYKNGQSYPVFEGIVVCAEFKDVILEAYREEQERREAEEKKRNE 862
Query: 547 KQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKL 606
QAISRWYQLLSSI+T+QRL +RYG +SD + + + QDD + +
Sbjct: 863 MQAISRWYQLLSSIVTQQRLKNRYGKGVLS-HTSSDEPTVDNNLSLKVSGSQDDKQSLEF 922
Query: 607 HQ----DNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
+ N N +PS +EDHKH+FL EDQ D+++L++TKRC CGFSVQVEEL
Sbjct: 923 RKGNKHKNKPNPPSRSPSAELEEDHKHLFLTEDQSFDDETLILTKRCHCGFSVQVEEL 962
BLAST of Cla009159 vs. TrEMBL
Match:
B9H3A4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s08580g PE=4 SV=2)
HSP 1 Score: 704.5 bits (1817), Expect = 1.2e-199
Identity = 381/654 (58.26%), Postives = 454/654 (69.42%), Query Frame = 1
Query: 1 MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLD-ELTCTTSSSC 60
MVD+ + V + C +KK+ + + S AV L K + E TS C
Sbjct: 305 MVDRPKEVFIPPKSLSCNEKKNKIQSNDSPP-----AVELKDKMVDTFPCEAQNNTSEEC 364
Query: 61 NSKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPS 120
+K SQ KRKGD+EFEMQLQMA+SATAV T + + S
Sbjct: 365 VTK----------KSQGSKRKGDLEFEMQLQMAMSATAVATQSNKELDVKESSNSSDVSS 424
Query: 121 P-KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVD 180
P K++++I NEES SS GISTA+GS K GSPLYWAEVYC+ ENLTGKWVHVDAV+ +VD
Sbjct: 425 PFKRIRKIANEES--SSQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVD 484
Query: 181 GEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRI 240
GE KVE A ACKTSLRYVVAF+GLGAKDVTRRYCMKWYKI ++RVN+LWWD VLAPLR
Sbjct: 485 GEQKVEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSLWWDAVLAPLRE 544
Query: 241 LEGQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDT 300
LE GG HLEK D E ++ ++ GL
Sbjct: 545 LESGATGGMAHLEKPHADASNE---------------------------HENVIASGL-- 604
Query: 301 DRDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKG 360
N F ATR+ +ED+EL+TRALTEPLPTNQQAYKNH LYA+EKWLTK Q+LHPKG
Sbjct: 605 -------NSFAATRNTIEDMELQTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKG 664
Query: 361 PVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDF 420
P+LGFCSGHPVYPR CVQ L+TK++WLREGLQVK ELPAK +K+S K KV SE DD+
Sbjct: 665 PILGFCSGHPVYPRACVQTLRTKERWLREGLQVKVKELPAKVVKQSGKLKKVQFSEDDDY 724
Query: 421 DQGDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFS 480
+ DS GV+ LYG WQLEPLQLP A+NGIVPKNERGQVDVWSEKCLPPGTVH+RLPRVF
Sbjct: 725 GETDS-GVVELYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFY 784
Query: 481 VAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHRE 540
VAKRLEIDYAPAMVGFEFRNGRS P++DGIVVC+EFKD ILEAY EE ER +AEE++ E
Sbjct: 785 VAKRLEIDYAPAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNE 844
Query: 541 KQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKL 600
QAISRWYQLLSSI+TRQRL++ YG+ P Q+ S+V+ T+++ + + S Q
Sbjct: 845 AQAISRWYQLLSSIITRQRLNNSYGNGLLP-QMPSNVQNTNNQPDVHVGSTQPPG----- 898
Query: 601 HQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
HQ + + ++APS +DH+HVFL+EDQ DE++ TKRC CGFSVQVEEL
Sbjct: 905 HQKDAKDRKLNAPSMTLTDDHEHVFLVEDQSFDEETSTRTKRCHCGFSVQVEEL 898
BLAST of Cla009159 vs. NCBI nr
Match:
gi|659121183|ref|XP_008460535.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X2 [Cucumis melo])
HSP 1 Score: 1194.9 bits (3090), Expect = 0.0e+00
Identity = 584/652 (89.57%), Postives = 611/652 (93.71%), Query Frame = 1
Query: 1 MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
MVDK E VDKDSLTS C DKKDN K TSGDN E NAVNL KK+HVLD+L+ TTSS+CN
Sbjct: 357 MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 416
Query: 61 SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
SKPDI ETFP NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 417 SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 476
Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 477 KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 536
Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 537 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 596
Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 597 RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 656
Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 657 DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 716
Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 717 LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 776
Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA 480
GDSQG IPLYGKWQLEPLQLP A++GIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA
Sbjct: 777 GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA 836
Query: 481 KRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQ 540
K+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE YNEEAERMEAEERR REKQ
Sbjct: 837 KKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQ 896
Query: 541 AISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLHQ 600
AISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+GNAD+PSCQ+DAEPFK Q
Sbjct: 897 AISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQ 956
Query: 601 DNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
DNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC CGFSVQVEEL
Sbjct: 957 DNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 1008
BLAST of Cla009159 vs. NCBI nr
Match:
gi|659121181|ref|XP_008460534.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X1 [Cucumis melo])
HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 584/670 (87.16%), Postives = 611/670 (91.19%), Query Frame = 1
Query: 1 MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
MVDK E VDKDSLTS C DKKDN K TSGDN E NAVNL KK+HVLD+L+ TTSS+CN
Sbjct: 357 MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 416
Query: 61 SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
SKPDI ETFP NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 417 SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 476
Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 477 KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 536
Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 537 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 596
Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 597 RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 656
Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 657 DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 716
Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 717 LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 776
Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEK 480
GDSQG IPLYGKWQLEPLQLP A++GIVPK NERGQVDVWSEK
Sbjct: 777 GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEK 836
Query: 481 CLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAY 540
CLPPGTVHIRLPRVFSVAK+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 837 CLPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETY 896
Query: 541 NEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKG 600
NEEAERMEAEERR REKQAISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+G
Sbjct: 897 NEEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEG 956
Query: 601 NADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCP 653
NAD+PSCQ+DAEPFK QDNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC
Sbjct: 957 NADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCH 1016
BLAST of Cla009159 vs. NCBI nr
Match:
gi|659121185|ref|XP_008460536.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X3 [Cucumis melo])
HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 584/670 (87.16%), Postives = 611/670 (91.19%), Query Frame = 1
Query: 1 MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
MVDK E VDKDSLTS C DKKDN K TSGDN E NAVNL KK+HVLD+L+ TTSS+CN
Sbjct: 326 MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 385
Query: 61 SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
SKPDI ETFP NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 386 SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 445
Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 446 KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 505
Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 506 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 565
Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 566 RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 625
Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 626 DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 685
Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 686 LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 745
Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEK 480
GDSQG IPLYGKWQLEPLQLP A++GIVPK NERGQVDVWSEK
Sbjct: 746 GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEK 805
Query: 481 CLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAY 540
CLPPGTVHIRLPRVFSVAK+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 806 CLPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETY 865
Query: 541 NEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKG 600
NEEAERMEAEERR REKQAISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+G
Sbjct: 866 NEEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEG 925
Query: 601 NADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCP 653
NAD+PSCQ+DAEPFK QDNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC
Sbjct: 926 NADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCH 985
BLAST of Cla009159 vs. NCBI nr
Match:
gi|659121187|ref|XP_008460538.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X4 [Cucumis melo])
HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 584/670 (87.16%), Postives = 611/670 (91.19%), Query Frame = 1
Query: 1 MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
MVDK E VDKDSLTS C DKKDN K TSGDN E NAVNL KK+HVLD+L+ TTSS+CN
Sbjct: 323 MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 382
Query: 61 SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
SKPDI ETFP NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 383 SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 442
Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 443 KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 502
Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 503 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 562
Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 563 RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 622
Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 623 DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 682
Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 683 LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 742
Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEK 480
GDSQG IPLYGKWQLEPLQLP A++GIVPK NERGQVDVWSEK
Sbjct: 743 GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEK 802
Query: 481 CLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAY 540
CLPPGTVHIRLPRVFSVAK+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 803 CLPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETY 862
Query: 541 NEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKG 600
NEEAERMEAEERR REKQAISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+G
Sbjct: 863 NEEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEG 922
Query: 601 NADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCP 653
NAD+PSCQ+DAEPFK QDNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC
Sbjct: 923 NADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCH 982
BLAST of Cla009159 vs. NCBI nr
Match:
gi|659121189|ref|XP_008460539.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X5 [Cucumis melo])
HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 584/670 (87.16%), Postives = 611/670 (91.19%), Query Frame = 1
Query: 1 MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
MVDK E VDKDSLTS C DKKDN K TSGDN E NAVNL KK+HVLD+L+ TTSS+CN
Sbjct: 264 MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 323
Query: 61 SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
SKPDI ETFP NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 324 SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 383
Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 384 KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 443
Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 444 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 503
Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 504 RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 563
Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 564 DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 623
Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 624 LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 683
Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEK 480
GDSQG IPLYGKWQLEPLQLP A++GIVPK NERGQVDVWSEK
Sbjct: 684 GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEK 743
Query: 481 CLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAY 540
CLPPGTVHIRLPRVFSVAK+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 744 CLPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETY 803
Query: 541 NEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKG 600
NEEAERMEAEERR REKQAISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+G
Sbjct: 804 NEEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEG 863
Query: 601 NADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCP 653
NAD+PSCQ+DAEPFK QDNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC
Sbjct: 864 NADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCH 923
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RAD4_ARATH | 2.9e-138 | 45.84 | DNA repair protein RAD4 OS=Arabidopsis thaliana GN=RAD4 PE=1 SV=1 | [more] |
XPC_HUMAN | 3.6e-48 | 35.66 | DNA repair protein complementing XP-C cells OS=Homo sapiens GN=XPC PE=1 SV=4 | [more] |
XPC_MOUSE | 1.4e-47 | 40.16 | DNA repair protein complementing XP-C cells homolog OS=Mus musculus GN=Xpc PE=1 ... | [more] |
XPC_DROME | 4.5e-43 | 36.51 | DNA repair protein complementing XP-C cells homolog OS=Drosophila melanogaster G... | [more] |
RHP41_SCHPO | 2.3e-23 | 31.92 | DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KQC2_CUCSA | 0.0e+00 | 88.50 | Uncharacterized protein OS=Cucumis sativus GN=Csa_5G424880 PE=4 SV=1 | [more] |
A0A061ENL1_THECC | 4.2e-205 | 58.81 | DNA repair protein xp-C / rad4, putative isoform 1 OS=Theobroma cacao GN=TCM_019... | [more] |
A0A061EFW6_THECC | 4.2e-205 | 58.81 | DNA repair protein xp-C / rad4, putative isoform 2 OS=Theobroma cacao GN=TCM_019... | [more] |
W9S159_9ROSA | 3.7e-201 | 56.84 | DNA repair protein complementing XP-C cell OS=Morus notabilis GN=L484_027190 PE=... | [more] |
B9H3A4_POPTR | 1.2e-199 | 58.26 | Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s08580g PE=4 SV=2 | [more] |