Cla009159 (gene) Watermelon (97103) v1

NameCla009159
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionDNA repair protein Rad4 (AHRD V1 ***- A2Q387_MEDTR); contains Interpro domain(s) IPR004583 DNA repair protein Rad4
LocationChr1 : 23522189 .. 23526133 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGATAAAGTAGAACCAGTTGATAAAGATTCTCTTACATCACGTTGTCGTGACAAGAAGGATAATCTCCATAAAAGTACTTCTGGTGATAATTGTGAAAGAAATGCAGTTAATTTAGCACGCAAGAAAATTCATGTCCTTGATGAGTTGACTTGCACCACAAGTTCCAGTTGCAACTCAAAACCTGATATCCCTGAAACCTTCCCCCCTAATAACTCTCAGGTACCGAAGAGGAAGGGGGATGTTGAGTTTGAAATGCAGTTACAAATGGCTCTCTCCGCTACAGCAGTTGAGACTATGCCTAGAAGTTCTAGCATAAATTACTCAAACGAGCCTCCTTTGAACTTTCCTTCACCTAAAAAACTGAAAAGAATTGTTAATGAAGAATCTGCCTCTTCTTCTCATGGAATCTCCACTGCTGTTGGTTCAAGTAAGGAGGGATCTCCCTTGTATTGGGCAGAAGTATACTGCAATGCAGAGAACTTGACAGGTAAGTGGGTACACGTTGATGCTGTGAATATGGTTGTTGATGGAGAGCACAAAGTGGAGGATTTAGCTGCTGCATGCAAAACATCTTTGAGATATGTGGTTGCTTTTTCTGGGCTTGGTGCTAAAGATGTGACTCGCAGGTCCTCTTTTCTTACTCTGTTTTTTCCAAGATGATGATTGAACTGGGAACTGTTCTTTTTATTATCCATTATCTTTTGAAATTTATTCATGTTTTCTAGCTCTTACCAATTTACCTACCAAGAGGTCATGCTTTCATTGAAGGGGGAAAGAGGAATGGGGTTTGTTCGTTTAGCATTATAGAATATGGAACATTGCATTGCATTTTTTGATTTGTATGATTAACTGGAACAAGCCAGAAAGAGAGATGATTGAAATTTAAAATTACCTGCAGTTTTTTCAAAGATGTCATCATGCTTGGTAGTCAGGATGCCATTATGCTTTGTCGTTAGAAGTTTGGAATGTGGGGTGGATGGATAAAATGGAAGTATTTTTTAGTGAGAGATCTGGATCCTTCAACAATACTTGCACGTAAGCTCTTCTATTCGCAATACATGTACTTAAGCTGCAGCTACTTTCTTCATATGGCTAAAACGGGATAATGATGGTAACTTCGATGTCAAATTTTCGTAACTGGTTATTGTATGAACAGACTGGGAAAGAGAACCACATTTGGAAACTCTTTAAGTAACCAAATACATACATGCTTATATATATCTTCCTCCTAATAACATTTTTCTTTCCTATTGGATCGGATAACTTGTGTACTGATATGTAATTTATATCGAGGAGGTTGATATTTATTTTTAGTGGGCATGACCTCTAAAAGAGGAAATTTCCCATGCAGCAAAATAAGCAATTAATATTTTAGGGATTTTTAATTGTCCATATTGTTCCCTATAAAAGGTCCGTGGAATTCCATAGTTACTTTTTCGTATTTTTTTCTTTTTTTTTTTTTTTAGGTGTGTCGGTAACTATTATGGTGGCATTGGTGGCATTTAGTTCTCTGTACATCTCATGTCTCCCCATTTTCTTCTTTCCCCAGTGGGAATTTCATGACATGAAATTTGGTTTTTGGACGTTTGTTACTCTAGCTTTCGAGGCTGATTATTTTGACTTCAAGGATTTTATGATCATCTTATATGCAGATATTGTATGAAGTGGTACAAGATAGAAACAAAGCGAGTTAATGCTCTTTGGTGGGATAATGTATTGGCACCGTTAAGGATACTTGAAGGACAAGTCGTGGGGGGCAGTGGTCACTTGGAAAAGAGCTGCATTGATGGCTTGATGGAACAAGATAAATTGAAAATGTCAGATTTGTCAGATAACTTGAAGCAAAAAAATCTTCTAGATGATGGTAACCAGCCAGGGAAGTCGGATCACAATGTGTCAGAAGGGCTTGACACTGACCGAGACTGTTCTATGGGTAATCAATTTGTTGCTACCAGGGACCATCTCGAGGATATAGAATTAGAAACTCGGGCTCTGACTGAACCTCTTCCAACTAATCAGCAGGTGGATGATTTATTTCAAACTATAGCTGGTATCTAGATTATTGAGCTTTGATTTGGAAAATCCTGTTTGAATTGCAGGCCTACAAAAACCACCGTTTATATGCCCTTGAAAAATGGCTAACTAAGTATCAGATGCTTCATCCAAAGGGTCCTGTTCTGGGTTTTTGTTCTGGACATCCAGTTTACCCTAGAACGTGTGTCCAAATGCTCAAGACAAAGCAAAAGTGGTTGCGTGAAGGACTGCAAGTCAAATCTAATGAACTACCTGCTAAGGTTCATTAGTCTTCACTTCATTATCACATGGTCATTTACTTATTCTTCTCTTTCTATGTTAATTGAATACTTTGAGGTTATTTGGTTTCAGGAGTTGAAACGTTCCATAAAGAAAATCAAAGTACTAGAATCTGAAGCTGATGACTTTGATCAGGGTGATTCCCAAGGAGTCATTCCACTCTATGGGAAGTGGCAGTTAGAACCATTGCAACTGCCTCGTGCTATAAATGGGATTGTACCAAAAGTGAGCTCTTTTATATTTTTACTTTTTATTATTTGTGATTCATATTAATGAATGCAGGTACTTTGATGCGCAGTGAACTTGGCATATTTAAAACTTTTAAGACTTGTTAGCTCTAAAACCTTTTTGATAAAATGTTTGCTTGGTTAGGATACCTCCTAACAAAAATACACTCAAAGACACAAATATTCAAGAACATTTTAATATGAAAATATATGGAAAGATACTGGAATATTATACAAATAGCGACAAGATAACCCTCTCAGCACATTCTAGGGCTGAGAAATTCTCTCCCAAGATCCTATGGTCATCCTAAATTCTTCCTACCCTTTCTCTCAACCCACTCTCTCTATTTATAACTACAAACTCTAACAAACTTACTATCTAATTACTAATATACCCCTTCTAATAATCATACTAATAACACTATATAACTCATTTATTTCTGTGATTATGTTCTATTGGTCTGTAAAGCATAGAACCTCAAGACAATTATTGAACCTTAAATTCCCCATTTTTGCTTGTTCATAACTCCTTAAGTTACTCTTTATAATTATTGCATTCTACTTCATAGAATGAGCGTGGTCAAGTGGATGTGTGGTCTGAGAAGTGCCTTCCACCAGGAACCGTGCATATCAGGTTGCCCAGGGTGTTCAGTGTTGCCAAGAGGCTGGAAATCGATTATGCACCTGCCATGGTTGGCTTCGAATTTCGAAATGGTCGATCATATCCTATTTATGATGGGATTGTGGTTTGTTCCGAGTTTAAAGATGTAATTTTAGAGGTTGGTATTTTTTTAGGTTCATTTACTTTCAACATTTTAGGGACTTATTCCTTGGACAAGTATTTTTCTTTCTTGTACTCCTAAATATACTCCTTCAATGTTCTAATTTTTGACCATCATACCTAGATATAAAGACCATTCTCCCATTATTATAGCTCAAGTCTTATGATCATTTCTTCTTGTATATTTCTCAACTCAAATCATGTTTGTTTGATATCCAGGCATACAATGAGGAAGCAGAGAGAATGGAGGCTGAAGAGAGAAGACATAGAGAAAAACAAGCTATTTCAAGATGGTATCAGCTTCTTTCATCCATCCTAACTCGGCAAAGGTTGAGCAGCCGTTATGGGGACAGTGAGAATCCATTACAAGTGGCGAGTGATGTCCGGGGCACACATGACAAGGGAAATGCAGATATTCCTTCTTGTCAAGATGATGCAGAACCTTTCAAGCTCCATCAGGATAACGTAAGTAACACTAATATTGATGCTCCATCTTTTAACAATCAAGAAGATCACAAGCATGTGTTCTTGTTAGAGGATCAGATTGTTGATGAGAAAAGTTTGGTAGTGACAAAACGATGTCCTTGTGGTTTTTCTGTTCAAGTCGAGGAATTATAA

mRNA sequence

ATGGTAGATAAAGTAGAACCAGTTGATAAAGATTCTCTTACATCACGTTGTCGTGACAAGAAGGATAATCTCCATAAAAGTACTTCTGGTGATAATTGTGAAAGAAATGCAGTTAATTTAGCACGCAAGAAAATTCATGTCCTTGATGAGTTGACTTGCACCACAAGTTCCAGTTGCAACTCAAAACCTGATATCCCTGAAACCTTCCCCCCTAATAACTCTCAGGTACCGAAGAGGAAGGGGGATGTTGAGTTTGAAATGCAGTTACAAATGGCTCTCTCCGCTACAGCAGTTGAGACTATGCCTAGAAGTTCTAGCATAAATTACTCAAACGAGCCTCCTTTGAACTTTCCTTCACCTAAAAAACTGAAAAGAATTGTTAATGAAGAATCTGCCTCTTCTTCTCATGGAATCTCCACTGCTGTTGGTTCAAGTAAGGAGGGATCTCCCTTGTATTGGGCAGAAGTATACTGCAATGCAGAGAACTTGACAGGTAAGTGGGTACACGTTGATGCTGTGAATATGGTTGTTGATGGAGAGCACAAAGTGGAGGATTTAGCTGCTGCATGCAAAACATCTTTGAGATATGTGGTTGCTTTTTCTGGGCTTGGTGCTAAAGATGTGACTCGCAGATATTGTATGAAGTGGTACAAGATAGAAACAAAGCGAGTTAATGCTCTTTGGTGGGATAATGTATTGGCACCGTTAAGGATACTTGAAGGACAAGTCGTGGGGGGCAGTGGTCACTTGGAAAAGAGCTGCATTGATGGCTTGATGGAACAAGATAAATTGAAAATGTCAGATTTGTCAGATAACTTGAAGCAAAAAAATCTTCTAGATGATGGTAACCAGCCAGGGAAGTCGGATCACAATGTGTCAGAAGGGCTTGACACTGACCGAGACTGTTCTATGGGTAATCAATTTGTTGCTACCAGGGACCATCTCGAGGATATAGAATTAGAAACTCGGGCTCTGACTGAACCTCTTCCAACTAATCAGCAGGCCTACAAAAACCACCGTTTATATGCCCTTGAAAAATGGCTAACTAAGTATCAGATGCTTCATCCAAAGGGTCCTGTTCTGGGTTTTTGTTCTGGACATCCAGTTTACCCTAGAACGTGTGTCCAAATGCTCAAGACAAAGCAAAAGTGGTTGCGTGAAGGACTGCAAGTCAAATCTAATGAACTACCTGCTAAGGAGTTGAAACGTTCCATAAAGAAAATCAAAGTACTAGAATCTGAAGCTGATGACTTTGATCAGGGTGATTCCCAAGGAGTCATTCCACTCTATGGGAAGTGGCAGTTAGAACCATTGCAACTGCCTCGTGCTATAAATGGGATTGTACCAAAAAATGAGCGTGGTCAAGTGGATGTGTGGTCTGAGAAGTGCCTTCCACCAGGAACCGTGCATATCAGGTTGCCCAGGGTGTTCAGTGTTGCCAAGAGGCTGGAAATCGATTATGCACCTGCCATGGTTGGCTTCGAATTTCGAAATGGTCGATCATATCCTATTTATGATGGGATTGTGGTTTGTTCCGAGTTTAAAGATGTAATTTTAGAGGCATACAATGAGGAAGCAGAGAGAATGGAGGCTGAAGAGAGAAGACATAGAGAAAAACAAGCTATTTCAAGATGGTATCAGCTTCTTTCATCCATCCTAACTCGGCAAAGGTTGAGCAGCCGTTATGGGGACAGTGAGAATCCATTACAAGTGGCGAGTGATGTCCGGGGCACACATGACAAGGGAAATGCAGATATTCCTTCTTGTCAAGATGATGCAGAACCTTTCAAGCTCCATCAGGATAACGTAAGTAACACTAATATTGATGCTCCATCTTTTAACAATCAAGAAGATCACAAGCATGTGTTCTTGTTAGAGGATCAGATTGTTGATGAGAAAAGTTTGGTAGTGACAAAACGATGTCCTTGTGGTTTTTCTGTTCAAGTCGAGGAATTATAA

Coding sequence (CDS)

ATGGTAGATAAAGTAGAACCAGTTGATAAAGATTCTCTTACATCACGTTGTCGTGACAAGAAGGATAATCTCCATAAAAGTACTTCTGGTGATAATTGTGAAAGAAATGCAGTTAATTTAGCACGCAAGAAAATTCATGTCCTTGATGAGTTGACTTGCACCACAAGTTCCAGTTGCAACTCAAAACCTGATATCCCTGAAACCTTCCCCCCTAATAACTCTCAGGTACCGAAGAGGAAGGGGGATGTTGAGTTTGAAATGCAGTTACAAATGGCTCTCTCCGCTACAGCAGTTGAGACTATGCCTAGAAGTTCTAGCATAAATTACTCAAACGAGCCTCCTTTGAACTTTCCTTCACCTAAAAAACTGAAAAGAATTGTTAATGAAGAATCTGCCTCTTCTTCTCATGGAATCTCCACTGCTGTTGGTTCAAGTAAGGAGGGATCTCCCTTGTATTGGGCAGAAGTATACTGCAATGCAGAGAACTTGACAGGTAAGTGGGTACACGTTGATGCTGTGAATATGGTTGTTGATGGAGAGCACAAAGTGGAGGATTTAGCTGCTGCATGCAAAACATCTTTGAGATATGTGGTTGCTTTTTCTGGGCTTGGTGCTAAAGATGTGACTCGCAGATATTGTATGAAGTGGTACAAGATAGAAACAAAGCGAGTTAATGCTCTTTGGTGGGATAATGTATTGGCACCGTTAAGGATACTTGAAGGACAAGTCGTGGGGGGCAGTGGTCACTTGGAAAAGAGCTGCATTGATGGCTTGATGGAACAAGATAAATTGAAAATGTCAGATTTGTCAGATAACTTGAAGCAAAAAAATCTTCTAGATGATGGTAACCAGCCAGGGAAGTCGGATCACAATGTGTCAGAAGGGCTTGACACTGACCGAGACTGTTCTATGGGTAATCAATTTGTTGCTACCAGGGACCATCTCGAGGATATAGAATTAGAAACTCGGGCTCTGACTGAACCTCTTCCAACTAATCAGCAGGCCTACAAAAACCACCGTTTATATGCCCTTGAAAAATGGCTAACTAAGTATCAGATGCTTCATCCAAAGGGTCCTGTTCTGGGTTTTTGTTCTGGACATCCAGTTTACCCTAGAACGTGTGTCCAAATGCTCAAGACAAAGCAAAAGTGGTTGCGTGAAGGACTGCAAGTCAAATCTAATGAACTACCTGCTAAGGAGTTGAAACGTTCCATAAAGAAAATCAAAGTACTAGAATCTGAAGCTGATGACTTTGATCAGGGTGATTCCCAAGGAGTCATTCCACTCTATGGGAAGTGGCAGTTAGAACCATTGCAACTGCCTCGTGCTATAAATGGGATTGTACCAAAAAATGAGCGTGGTCAAGTGGATGTGTGGTCTGAGAAGTGCCTTCCACCAGGAACCGTGCATATCAGGTTGCCCAGGGTGTTCAGTGTTGCCAAGAGGCTGGAAATCGATTATGCACCTGCCATGGTTGGCTTCGAATTTCGAAATGGTCGATCATATCCTATTTATGATGGGATTGTGGTTTGTTCCGAGTTTAAAGATGTAATTTTAGAGGCATACAATGAGGAAGCAGAGAGAATGGAGGCTGAAGAGAGAAGACATAGAGAAAAACAAGCTATTTCAAGATGGTATCAGCTTCTTTCATCCATCCTAACTCGGCAAAGGTTGAGCAGCCGTTATGGGGACAGTGAGAATCCATTACAAGTGGCGAGTGATGTCCGGGGCACACATGACAAGGGAAATGCAGATATTCCTTCTTGTCAAGATGATGCAGAACCTTTCAAGCTCCATCAGGATAACGTAAGTAACACTAATATTGATGCTCCATCTTTTAACAATCAAGAAGATCACAAGCATGTGTTCTTGTTAGAGGATCAGATTGTTGATGAGAAAAGTTTGGTAGTGACAAAACGATGTCCTTGTGGTTTTTCTGTTCAAGTCGAGGAATTATAA

Protein sequence

MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCNSKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSPKKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEGQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDRDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQGDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL
BLAST of Cla009159 vs. Swiss-Prot
Match: RAD4_ARATH (DNA repair protein RAD4 OS=Arabidopsis thaliana GN=RAD4 PE=1 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 2.9e-138
Identity = 292/637 (45.84%), Postives = 375/637 (58.87%), Query Frame = 1

Query: 20  KKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCNSKPDIPETFPPNNSQVPKR 79
           +K  L      D  + NAVN                 SSC +   I        S   +R
Sbjct: 310 EKPQLGNPLGSDQVQDNAVN-----------------SSCEAGMSI-------KSDGTRR 369

Query: 80  KGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSPKKLKRI--VNEESASSSHG 139
           KGDVEFE Q+ MALSATA     +SS +N          + KK++ I  ++  S+ S   
Sbjct: 370 KGDVEFERQIAMALSATADNQ--QSSQVN----------NTKKVREITKISNSSSVSDQV 429

Query: 140 ISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYV 199
           ISTA GS K  SPL W EVYCN EN+ GKWVHVDAVN ++D E  +E  AAACKT LRYV
Sbjct: 430 ISTAFGSKKVDSPLCWLEVYCNGENMDGKWVHVDAVNGMIDAEQNIEAAAAACKTVLRYV 489

Query: 200 VAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEGQVVGGSGHLEKSCIDG 259
           VAF+  GAKDVTRRYC KW+ I +KRV+++WWD VLAPL  LE     G+ H E   +  
Sbjct: 490 VAFAAGGAKDVTRRYCTKWHTISSKRVSSVWWDMVLAPLVHLE----SGATHDEDIALRN 549

Query: 260 L--MEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDRDCSMGNQFVATRDHL 319
              +     + S  S +   ++ L+D     ++   ++E L T++         A + H 
Sbjct: 550 FNGLNPVSSRASSSSSSFGIRSALEDMELATRA---LTESLPTNQQ--------AYKSH- 609

Query: 320 EDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCV 379
                E  A+ + L  NQ  +    +                   LGFCSGHPVYPRTCV
Sbjct: 610 -----EIYAIEKWLHKNQILHPKGPV-------------------LGFCSGHPVYPRTCV 669

Query: 380 QMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQGDSQGVIPLYGKWQL 439
           Q LKTK++WLR+GLQ+K+NE+P+K LKR+ K  KV + E  D +       + LYGKWQ+
Sbjct: 670 QTLKTKERWLRDGLQLKANEVPSKILKRNSKFKKVKDFEDGDNNIKGGSSCMELYGKWQM 729

Query: 440 EPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFE 499
           EPL LP A+NGIVPKNERGQVDVWSEKCLPPGTVH+R PR+F+VAKR  IDYAPAMVGFE
Sbjct: 730 EPLCLPPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPRIFAVAKRFGIDYAPAMVGFE 789

Query: 500 FRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQLLSSILTR 559
           +R+G + PI++GIVVC+EFKD ILEAY EE E+ E EERR  E QA SRWYQLLSSILTR
Sbjct: 790 YRSGGATPIFEGIVVCTEFKDTILEAYAEEQEKKEEEERRRNEAQAASRWYQLLSSILTR 849

Query: 560 QRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNN 619
           +RL +RY ++ N ++  S      +  +  +   ++   P K         +    S N 
Sbjct: 850 ERLKNRYANNSNDVEAKS-----LEVNSETVVKAKNVKAPEKQRVAKRGEKSRVRKSRNE 865

Query: 620 QEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
            E H+HVFL E++  DE++ V TKRC CGFSV+VE++
Sbjct: 910 DESHEHVFLDEEETFDEETSVKTKRCKCGFSVEVEQM 865

BLAST of Cla009159 vs. Swiss-Prot
Match: XPC_HUMAN (DNA repair protein complementing XP-C cells OS=Homo sapiens GN=XPC PE=1 SV=4)

HSP 1 Score: 194.5 bits (493), Expect = 3.6e-48
Identity = 102/286 (35.66%), Postives = 158/286 (55.24%), Query Frame = 1

Query: 312 RDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK-GPVLGFCSGHPVY 371
           R+  ED+E + + + +PLPT    YKNH LYAL++ L KY+ ++P+   +LG+C G  VY
Sbjct: 617 REKKEDLEFQAKHMDQPLPTAIGLYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVY 676

Query: 372 PRTCVQMLKTKQKWLREGLQVKSNELPAKELK---RSIKKIKVLESEADDFDQGDSQGVI 431
            R CV  L ++  WL++   V+  E+P K +K      +K ++ E +  +      +  +
Sbjct: 677 SRDCVHTLHSRDTWLKKARVVRLGEVPYKMVKGFSNRARKARLAEPQLRE------ENDL 736

Query: 432 PLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDY 491
            L+G WQ E  Q P A++G VP+NE G V ++    +P G V + LP +  VA++L+ID 
Sbjct: 737 GLFGYWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQLNLPNLHRVARKLDIDC 796

Query: 492 APAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQ 551
             A+ GF+F  G S+P+ DG +VC EFKDV+L A+  E   +E +E+  +EK+A+  W  
Sbjct: 797 VQAITGFDFHGGYSHPVTDGYIVCEEFKDVLLTAWENEQAVIERKEKEKKEKRALGNWKL 856

Query: 552 LLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDA 594
           L   +L R+RL  RYG         +D  G       +  S Q +A
Sbjct: 857 LAKGLLIRERLKRRYGPKSEAAAPHTDAGGGLSSDEEEGTSSQAEA 896

BLAST of Cla009159 vs. Swiss-Prot
Match: XPC_MOUSE (DNA repair protein complementing XP-C cells homolog OS=Mus musculus GN=Xpc PE=1 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 1.4e-47
Identity = 102/254 (40.16%), Postives = 148/254 (58.27%), Query Frame = 1

Query: 312 RDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK-GPVLGFCSGHPVY 371
           R+  ED E + + L +PLPT+   YKNH LYAL++ L K+Q ++P+   VLG+C G  VY
Sbjct: 610 REKKEDQEFQAKHLDQPLPTSISTYKNHPLYALKRHLLKFQAIYPETAAVLGYCRGEAVY 669

Query: 372 PRTCVQMLKTKQKWLREGLQVKSNELPAKELKR-SIKKIKVLESEADDFDQGDSQGVIPL 431
            R CV  L ++  WL++   V+  E+P K +K  S +  K   SE    D  D    + L
Sbjct: 670 SRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKARLSEPQLHDHND----LGL 729

Query: 432 YGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAP 491
           YG WQ E  Q P A++G VP+NE G V ++    +P G V + LP +  VA++L ID   
Sbjct: 730 YGHWQTEEYQPPIAVDGKVPRNEFGNVYLFLPSMMPVGCVQMTLPNLNRVARKLGIDCVQ 789

Query: 492 AMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQLL 551
           A+ GF+F  G  +P+ DG +VC EF+DV+L A+  E   +E +E+  +EK+A+  W  L+
Sbjct: 790 AITGFDFHGGYCHPVTDGYIVCEEFRDVLLAAWENEQAIIEKKEKEKKEKRALGNWKLLV 849

Query: 552 SSILTRQRLSSRYG 564
             +L R+RL  RYG
Sbjct: 850 RGLLIRERLKLRYG 859

BLAST of Cla009159 vs. Swiss-Prot
Match: XPC_DROME (DNA repair protein complementing XP-C cells homolog OS=Drosophila melanogaster GN=Xpc PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 4.5e-43
Identity = 92/252 (36.51%), Postives = 140/252 (55.56%), Query Frame = 1

Query: 312  RDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK-GPVLGFCSGHPVY 371
            RD  ED +L      +PLP +   +K+H LY LE+ L K+Q L+P   P LGF  G  VY
Sbjct: 1047 RDITEDDQLRRIHSDKPLPKSISEFKDHPLYVLERHLLKFQGLYPPDAPTLGFIRGEAVY 1106

Query: 372  PRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQGDSQGVIPLY 431
             R CV +L +++ WL+    VK  E P K +K   K  ++  +   D         + ++
Sbjct: 1107 SRDCVHLLHSREIWLKSARVVKLGEQPYKVVKARPKWDRLTRTVIKDQP-------LEIF 1166

Query: 432  GKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPA 491
            G WQ +  + P A NGIVP+N  G V+++ +  LP  TVH+RLP +  + K+L ID A A
Sbjct: 1167 GYWQTQEYEPPTAENGIVPRNAYGNVELFKDCMLPKKTVHLRLPGLMRICKKLNIDCANA 1226

Query: 492  MVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQAISRWYQLLS 551
            +VGF+F  G  +P+YDG +VC EF++V+  A+ E+ +    +E+   E +    W +L+ 
Sbjct: 1227 VVGFDFHQGACHPMYDGFIVCEEFREVVTAAWEEDQQVQVLKEQEKYETRVYGNWKKLIK 1286

Query: 552  SILTRQRLSSRY 563
             +L R+RL  +Y
Sbjct: 1287 GLLIRERLKKKY 1291

BLAST of Cla009159 vs. Swiss-Prot
Match: RHP41_SCHPO (DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rhp41 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.3e-23
Identity = 83/260 (31.92%), Postives = 117/260 (45.00%), Query Frame = 1

Query: 308 FVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK---GPVLGFC 367
           F    D +ED EL     +E +P N Q  K+H L+ LE+ L K Q +      G +    
Sbjct: 399 FYNDMDAIEDAELLRLEQSEGIPRNIQDLKDHPLFVLERHLKKNQAIKTGKSCGRINTKN 458

Query: 368 SGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQGDSQ 427
               VYPR  V    + + W R+G  +K    P K +K   K                  
Sbjct: 459 GVELVYPRKYVSNGFSAEHWYRKGRIIKPGAQPLKHVKNGDK------------------ 518

Query: 428 GVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLE 487
            V+PLY +   +       +  IVPKN  G +D++    LP G  H R     + AK LE
Sbjct: 519 -VLPLYDEEATQLYTPKPVVANIVPKNAYGNIDLYVPSMLPYGAYHCRKRCALAAAKFLE 578

Query: 488 IDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVI-LEAYNEEAERMEAEERRHREKQAIS 547
           IDYA A+VGF+F+   S P  +G+VV   +++ I L A   + E  EAE R  R K  + 
Sbjct: 579 IDYAKAVVGFDFQRKYSKPKLEGVVVSKRYEEAIDLIAEEIDQEEKEAEARNVR-KTCLL 638

Query: 548 RWYQLLSSILTRQRLSSRYG 564
            W +L++ +  RQR+   YG
Sbjct: 639 LWKRLITGLRIRQRVFEEYG 638


HSP 2 Score: 43.1 bits (100), Expect = 1.3e-02
Identity = 27/78 (34.62%), Postives = 36/78 (46.15%), Query Frame = 1

Query: 150 PLYWAEVYCNAENLTGKWVHVDAVN--MVVDGEHKVEDLAAACKTSLRYVVAFSGLG-AK 209
           P++W E +  A     KWV VD      V+    + E  ++     + YV A    G  K
Sbjct: 302 PVFWVEAFNKAMQ---KWVCVDPFGDASVIGKYRRFEPASSDHLNQMTYVFAIEANGYVK 361

Query: 210 DVTRRYCMKWYKIETKRV 225
           DVTR+YC+ +YKI   RV
Sbjct: 362 DVTRKYCLHYYKILKNRV 376

BLAST of Cla009159 vs. TrEMBL
Match: A0A0A0KQC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G424880 PE=4 SV=1)

HSP 1 Score: 1161.0 bits (3002), Expect = 0.0e+00
Identity = 577/652 (88.50%), Postives = 601/652 (92.18%), Query Frame = 1

Query: 1   MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
           MVDK E VDKDSLTSRC DKKDN  K TSGDN E NAVNL  KK HVL+ L+ T SSSCN
Sbjct: 326 MVDKAEAVDKDSLTSRCLDKKDNPRKRTSGDNRESNAVNLVGKKTHVLNALSSTGSSSCN 385

Query: 61  SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
           SKPDI ETFPP NSQV KRKGD+EFEMQLQMALSATAVETMP +SSIN+ NEPPLNFP  
Sbjct: 386 SKPDISETFPPKNSQVQKRKGDIEFEMQLQMALSATAVETMPSNSSINHLNEPPLNFPPS 445

Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
           KKLKRIVNEESASS HGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 446 KKLKRIVNEESASS-HGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 505

Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
           HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 506 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 565

Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
           GQ V G+GHLEK CID LMEQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGL TDR
Sbjct: 566 GQAVRGTGHLEKCCIDDLMEQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLVTDR 625

Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
           D S+GNQ VATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 626 DFSLGNQ-VATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 685

Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
           LGFCSG+PVYPRTCVQ+LKTK KWLREGLQV+SNELP KELKRSIKKIK+LESEADDFDQ
Sbjct: 686 LGFCSGYPVYPRTCVQVLKTKHKWLREGLQVRSNELPVKELKRSIKKIKILESEADDFDQ 745

Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA 480
           GDSQG IPLYGKWQLEPLQLPRA++GIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA
Sbjct: 746 GDSQGTIPLYGKWQLEPLQLPRAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA 805

Query: 481 KRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQ 540
           K+LEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILE YNEEAERMEAEERR REKQ
Sbjct: 806 KKLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRLREKQ 865

Query: 541 AISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLHQ 600
           AISRWYQLLSSI+TRQRL+SRYGDSEN  QV SD+R  HD+ NAD+PSCQ+D EPFK   
Sbjct: 866 AISRWYQLLSSIITRQRLNSRYGDSENLSQVTSDIRNMHDERNADVPSCQEDVEPFKGQP 925

Query: 601 DNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
           DN+SNTN+DAPSF NQ DHKHVFLLEDQI DEKSLVVTKRC CGFSVQVEEL
Sbjct: 926 DNLSNTNMDAPSFINQ-DHKHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 974

BLAST of Cla009159 vs. TrEMBL
Match: A0A061ENL1_THECC (DNA repair protein xp-C / rad4, putative isoform 1 OS=Theobroma cacao GN=TCM_019127 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 4.2e-205
Identity = 384/653 (58.81%), Postives = 472/653 (72.28%), Query Frame = 1

Query: 10  KDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSS--SCNSKPDIPE 69
           ++SL S C+ K       TS D   R +          +DE+T  TS+  +C ++ D   
Sbjct: 335 ENSLRSSCKSKGGC---PTSNDTQSRYST--------AVDEVTDRTSNLFACQAQLDTYG 394

Query: 70  TFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRS------SSINYSNEPPLNFPSPK 129
              P  SQ  KRKGD+EFEMQL MA+SAT V T+  S      S+ N +N    + PS K
Sbjct: 395 QCAPTKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPS-K 454

Query: 130 KLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 189
           + K+I   ESA+SS G+STA+GS K GSPL+WAEVYC  ENLTGKWVHVDA+N ++DGE 
Sbjct: 455 RWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNAIIDGEQ 514

Query: 190 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEG 249
           KVED AAACKT+LRYVVAF+G GAKDVTRRYCMKWYKI  KRVN++WWD VLAPLR LE 
Sbjct: 515 KVEDAAAACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKRVNSIWWDAVLAPLRELES 574

Query: 250 QVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSE--GLDTD 309
              GG+ ++EK   +   EQ+K+K S +S+     +  +    P KS     +  G  ++
Sbjct: 575 GATGGTINMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVILPEKSGQEAFKEYGSKSE 634

Query: 310 RDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGP 369
            + S  +  VATR+ LED+ELETRALTEPLPTNQQAYKNH LYALE+WLTK Q+LHP+GP
Sbjct: 635 VESSTKHSLVATRNSLEDMELETRALTEPLPTNQQAYKNHALYALERWLTKCQILHPRGP 694

Query: 370 VLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFD 429
           +LG+CSGHPVYPRTCVQ LK +++WLREGLQVK NE+PAK LKRS K  KV  SE DD++
Sbjct: 695 ILGYCSGHPVYPRTCVQTLKPRERWLREGLQVKGNEIPAKVLKRSAKLKKVQVSEEDDYE 754

Query: 430 QGDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSV 489
           + DS+G I LYGKWQLEPL LP A++GIVPKNERGQVDVWSEKCLPPGTVH+RLPRVFSV
Sbjct: 755 EIDSKGTIELYGKWQLEPLCLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFSV 814

Query: 490 AKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREK 549
           AKRLEIDYAPAMVGFEFRNGR+ PI+DGIVVCSEFKD ILEAY EE ER  AEE++  E 
Sbjct: 815 AKRLEIDYAPAMVGFEFRNGRAAPIFDGIVVCSEFKDAILEAYAEEEERRVAEEKKRNEA 874

Query: 550 QAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLH 609
           QAISRWYQLLSSI+TRQ+L S YGD  +  Q + +++  +++ NA   S +DD +   L 
Sbjct: 875 QAISRWYQLLSSIITRQKLKSYYGDGSSS-QASRNIQDKNNEINAPDESSKDDRQSTGLW 934

Query: 610 QDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
           + +  +T  + PS    EDH+HVFL E++  D ++ V TKRC CGFS+QVEEL
Sbjct: 935 KGDGEDTLCNIPSGTLVEDHEHVFLRENESFDAENSVRTKRCHCGFSIQVEEL 974

BLAST of Cla009159 vs. TrEMBL
Match: A0A061EFW6_THECC (DNA repair protein xp-C / rad4, putative isoform 2 OS=Theobroma cacao GN=TCM_019127 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 4.2e-205
Identity = 384/653 (58.81%), Postives = 472/653 (72.28%), Query Frame = 1

Query: 10  KDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSS--SCNSKPDIPE 69
           ++SL S C+ K       TS D   R +          +DE+T  TS+  +C ++ D   
Sbjct: 269 ENSLRSSCKSKGGC---PTSNDTQSRYST--------AVDEVTDRTSNLFACQAQLDTYG 328

Query: 70  TFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRS------SSINYSNEPPLNFPSPK 129
              P  SQ  KRKGD+EFEMQL MA+SAT V T+  S      S+ N +N    + PS K
Sbjct: 329 QCAPTKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPS-K 388

Query: 130 KLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 189
           + K+I   ESA+SS G+STA+GS K GSPL+WAEVYC  ENLTGKWVHVDA+N ++DGE 
Sbjct: 389 RWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNAIIDGEQ 448

Query: 190 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEG 249
           KVED AAACKT+LRYVVAF+G GAKDVTRRYCMKWYKI  KRVN++WWD VLAPLR LE 
Sbjct: 449 KVEDAAAACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKRVNSIWWDAVLAPLRELES 508

Query: 250 QVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSE--GLDTD 309
              GG+ ++EK   +   EQ+K+K S +S+     +  +    P KS     +  G  ++
Sbjct: 509 GATGGTINMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVILPEKSGQEAFKEYGSKSE 568

Query: 310 RDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGP 369
            + S  +  VATR+ LED+ELETRALTEPLPTNQQAYKNH LYALE+WLTK Q+LHP+GP
Sbjct: 569 VESSTKHSLVATRNSLEDMELETRALTEPLPTNQQAYKNHALYALERWLTKCQILHPRGP 628

Query: 370 VLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFD 429
           +LG+CSGHPVYPRTCVQ LK +++WLREGLQVK NE+PAK LKRS K  KV  SE DD++
Sbjct: 629 ILGYCSGHPVYPRTCVQTLKPRERWLREGLQVKGNEIPAKVLKRSAKLKKVQVSEEDDYE 688

Query: 430 QGDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSV 489
           + DS+G I LYGKWQLEPL LP A++GIVPKNERGQVDVWSEKCLPPGTVH+RLPRVFSV
Sbjct: 689 EIDSKGTIELYGKWQLEPLCLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFSV 748

Query: 490 AKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREK 549
           AKRLEIDYAPAMVGFEFRNGR+ PI+DGIVVCSEFKD ILEAY EE ER  AEE++  E 
Sbjct: 749 AKRLEIDYAPAMVGFEFRNGRAAPIFDGIVVCSEFKDAILEAYAEEEERRVAEEKKRNEA 808

Query: 550 QAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLH 609
           QAISRWYQLLSSI+TRQ+L S YGD  +  Q + +++  +++ NA   S +DD +   L 
Sbjct: 809 QAISRWYQLLSSIITRQKLKSYYGDGSSS-QASRNIQDKNNEINAPDESSKDDRQSTGLW 868

Query: 610 QDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
           + +  +T  + PS    EDH+HVFL E++  D ++ V TKRC CGFS+QVEEL
Sbjct: 869 KGDGEDTLCNIPSGTLVEDHEHVFLRENESFDAENSVRTKRCHCGFSIQVEEL 908

BLAST of Cla009159 vs. TrEMBL
Match: W9S159_9ROSA (DNA repair protein complementing XP-C cell OS=Morus notabilis GN=L484_027190 PE=4 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 3.7e-201
Identity = 374/658 (56.84%), Postives = 466/658 (70.82%), Query Frame = 1

Query: 7   PVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCNSKPDIP 66
           P +KDS              + S D+   N  +  ++   ++ EL   +S +C+++    
Sbjct: 323 PNEKDSACETSHRSSCKRSNAESKDSASANESS-NKQPCPLVFELKHDSSGACHTQI--- 382

Query: 67  ETFPPNNSQVPKRKGDVEFEMQLQMALSATA-----VETMPRSSSINYSNEPPLNFPSPK 126
                  SQ PKRKGD+EF +Q++MA+SATA     +      SS+   N    NF SP 
Sbjct: 383 -------SQGPKRKGDIEFSLQMEMAISATAAVIANIADGKMGSSMGNPNSNLPNFISPF 442

Query: 127 KLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 186
           K  + V  E +SSSHGISTA+GS + GSPLYWAEVYC+ ENLTGKWVHVDAVN ++D E 
Sbjct: 443 KRMKKVLSEGSSSSHGISTAIGSRRVGSPLYWAEVYCSGENLTGKWVHVDAVNAIIDEEE 502

Query: 187 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEG 246
           KVE LAAACK SLRYVVAF+G GAKDVTRRYCMKWYKI +KRVN++WWD+VLAPL+ +E 
Sbjct: 503 KVEALAAACKRSLRYVVAFAGNGAKDVTRRYCMKWYKIASKRVNSIWWDSVLAPLKEIES 562

Query: 247 QVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSE--GLDTD 306
           +   G  HLE   ID   + D  K   +++NLK +N  ++    G S   VS+  G+ TD
Sbjct: 563 RATNGMFHLENDNIDASFKHDNPK--HIAENLKAENFPNNATLLGSSGLEVSKVCGVKTD 622

Query: 307 RDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGP 366
              S+     A+R  LED+ELETRALTEPLPTNQQAY+ H+LYA+EKWL KYQ+LHP+GP
Sbjct: 623 MGSSLT---AASRSSLEDMELETRALTEPLPTNQQAYRTHQLYAIEKWLNKYQILHPRGP 682

Query: 367 VLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFD 426
           +LGFC+GH VYPRTCVQ LKTK++WLREGLQVK++ELP KELKRS  K++ L+S  DD  
Sbjct: 683 ILGFCAGHAVYPRTCVQTLKTKERWLREGLQVKASELPVKELKRS-GKLQKLKSFEDDES 742

Query: 427 QGD-SQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFS 486
            GD S+G + LYGKWQLEPLQLP A+NGIVPKNERGQVDVWSEKCLPPGT H+RLPRVFS
Sbjct: 743 VGDNSEGTLKLYGKWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTAHLRLPRVFS 802

Query: 487 VAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHRE 546
           VAKRLEIDYAPAMVGFE++NG+SYP+++GIVVC+EFKDVILEAY EE ER EAEE++  E
Sbjct: 803 VAKRLEIDYAPAMVGFEYKNGQSYPVFEGIVVCAEFKDVILEAYREEQERREAEEKKRNE 862

Query: 547 KQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKL 606
            QAISRWYQLLSSI+T+QRL +RYG        +SD     +  +  +   QDD +  + 
Sbjct: 863 MQAISRWYQLLSSIVTQQRLKNRYGKGVLS-HTSSDEPTVDNNLSLKVSGSQDDKQSLEF 922

Query: 607 HQ----DNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
            +     N  N    +PS   +EDHKH+FL EDQ  D+++L++TKRC CGFSVQVEEL
Sbjct: 923 RKGNKHKNKPNPPSRSPSAELEEDHKHLFLTEDQSFDDETLILTKRCHCGFSVQVEEL 962

BLAST of Cla009159 vs. TrEMBL
Match: B9H3A4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s08580g PE=4 SV=2)

HSP 1 Score: 704.5 bits (1817), Expect = 1.2e-199
Identity = 381/654 (58.26%), Postives = 454/654 (69.42%), Query Frame = 1

Query: 1   MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLD-ELTCTTSSSC 60
           MVD+ + V     +  C +KK+ +  + S       AV L  K +     E    TS  C
Sbjct: 305 MVDRPKEVFIPPKSLSCNEKKNKIQSNDSPP-----AVELKDKMVDTFPCEAQNNTSEEC 364

Query: 61  NSKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPS 120
            +K           SQ  KRKGD+EFEMQLQMA+SATAV T          +    +  S
Sbjct: 365 VTK----------KSQGSKRKGDLEFEMQLQMAMSATAVATQSNKELDVKESSNSSDVSS 424

Query: 121 P-KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVD 180
           P K++++I NEES  SS GISTA+GS K GSPLYWAEVYC+ ENLTGKWVHVDAV+ +VD
Sbjct: 425 PFKRIRKIANEES--SSQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVD 484

Query: 181 GEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRI 240
           GE KVE  A ACKTSLRYVVAF+GLGAKDVTRRYCMKWYKI ++RVN+LWWD VLAPLR 
Sbjct: 485 GEQKVEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSLWWDAVLAPLRE 544

Query: 241 LEGQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDT 300
           LE    GG  HLEK   D   E                            ++ ++ GL  
Sbjct: 545 LESGATGGMAHLEKPHADASNE---------------------------HENVIASGL-- 604

Query: 301 DRDCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKG 360
                  N F ATR+ +ED+EL+TRALTEPLPTNQQAYKNH LYA+EKWLTK Q+LHPKG
Sbjct: 605 -------NSFAATRNTIEDMELQTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKG 664

Query: 361 PVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDF 420
           P+LGFCSGHPVYPR CVQ L+TK++WLREGLQVK  ELPAK +K+S K  KV  SE DD+
Sbjct: 665 PILGFCSGHPVYPRACVQTLRTKERWLREGLQVKVKELPAKVVKQSGKLKKVQFSEDDDY 724

Query: 421 DQGDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFS 480
            + DS GV+ LYG WQLEPLQLP A+NGIVPKNERGQVDVWSEKCLPPGTVH+RLPRVF 
Sbjct: 725 GETDS-GVVELYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFY 784

Query: 481 VAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHRE 540
           VAKRLEIDYAPAMVGFEFRNGRS P++DGIVVC+EFKD ILEAY EE ER +AEE++  E
Sbjct: 785 VAKRLEIDYAPAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNE 844

Query: 541 KQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKL 600
            QAISRWYQLLSSI+TRQRL++ YG+   P Q+ S+V+ T+++ +  + S Q        
Sbjct: 845 AQAISRWYQLLSSIITRQRLNNSYGNGLLP-QMPSNVQNTNNQPDVHVGSTQPPG----- 898

Query: 601 HQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
           HQ +  +  ++APS    +DH+HVFL+EDQ  DE++   TKRC CGFSVQVEEL
Sbjct: 905 HQKDAKDRKLNAPSMTLTDDHEHVFLVEDQSFDEETSTRTKRCHCGFSVQVEEL 898

BLAST of Cla009159 vs. NCBI nr
Match: gi|659121183|ref|XP_008460535.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X2 [Cucumis melo])

HSP 1 Score: 1194.9 bits (3090), Expect = 0.0e+00
Identity = 584/652 (89.57%), Postives = 611/652 (93.71%), Query Frame = 1

Query: 1    MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
            MVDK E VDKDSLTS C DKKDN  K TSGDN E NAVNL  KK+HVLD+L+ TTSS+CN
Sbjct: 357  MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 416

Query: 61   SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
            SKPDI ETFP  NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 417  SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 476

Query: 121  KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
            KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 477  KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 536

Query: 181  HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
            HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 537  HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 596

Query: 241  GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
             Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 597  RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 656

Query: 301  DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
            D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 657  DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 716

Query: 361  LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
            LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 717  LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 776

Query: 421  GDSQGVIPLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA 480
            GDSQG IPLYGKWQLEPLQLP A++GIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA
Sbjct: 777  GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVA 836

Query: 481  KRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYNEEAERMEAEERRHREKQ 540
            K+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE YNEEAERMEAEERR REKQ
Sbjct: 837  KKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQ 896

Query: 541  AISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKGNADIPSCQDDAEPFKLHQ 600
            AISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+GNAD+PSCQ+DAEPFK  Q
Sbjct: 897  AISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQ 956

Query: 601  DNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCPCGFSVQVEEL 653
            DNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC CGFSVQVEEL
Sbjct: 957  DNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 1008

BLAST of Cla009159 vs. NCBI nr
Match: gi|659121181|ref|XP_008460534.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X1 [Cucumis melo])

HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 584/670 (87.16%), Postives = 611/670 (91.19%), Query Frame = 1

Query: 1    MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
            MVDK E VDKDSLTS C DKKDN  K TSGDN E NAVNL  KK+HVLD+L+ TTSS+CN
Sbjct: 357  MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 416

Query: 61   SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
            SKPDI ETFP  NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 417  SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 476

Query: 121  KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
            KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 477  KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 536

Query: 181  HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
            HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 537  HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 596

Query: 241  GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
             Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 597  RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 656

Query: 301  DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
            D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 657  DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 716

Query: 361  LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
            LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 717  LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 776

Query: 421  GDSQGVIPLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEK 480
            GDSQG IPLYGKWQLEPLQLP A++GIVPK                  NERGQVDVWSEK
Sbjct: 777  GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEK 836

Query: 481  CLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAY 540
            CLPPGTVHIRLPRVFSVAK+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 837  CLPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETY 896

Query: 541  NEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKG 600
            NEEAERMEAEERR REKQAISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+G
Sbjct: 897  NEEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEG 956

Query: 601  NADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCP 653
            NAD+PSCQ+DAEPFK  QDNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC 
Sbjct: 957  NADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCH 1016

BLAST of Cla009159 vs. NCBI nr
Match: gi|659121185|ref|XP_008460536.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X3 [Cucumis melo])

HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 584/670 (87.16%), Postives = 611/670 (91.19%), Query Frame = 1

Query: 1   MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
           MVDK E VDKDSLTS C DKKDN  K TSGDN E NAVNL  KK+HVLD+L+ TTSS+CN
Sbjct: 326 MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 385

Query: 61  SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
           SKPDI ETFP  NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 386 SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 445

Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
           KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 446 KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 505

Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
           HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 506 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 565

Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
            Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 566 RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 625

Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
           D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 626 DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 685

Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
           LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 686 LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 745

Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEK 480
           GDSQG IPLYGKWQLEPLQLP A++GIVPK                  NERGQVDVWSEK
Sbjct: 746 GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEK 805

Query: 481 CLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAY 540
           CLPPGTVHIRLPRVFSVAK+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 806 CLPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETY 865

Query: 541 NEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKG 600
           NEEAERMEAEERR REKQAISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+G
Sbjct: 866 NEEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEG 925

Query: 601 NADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCP 653
           NAD+PSCQ+DAEPFK  QDNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC 
Sbjct: 926 NADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCH 985

BLAST of Cla009159 vs. NCBI nr
Match: gi|659121187|ref|XP_008460538.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X4 [Cucumis melo])

HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 584/670 (87.16%), Postives = 611/670 (91.19%), Query Frame = 1

Query: 1   MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
           MVDK E VDKDSLTS C DKKDN  K TSGDN E NAVNL  KK+HVLD+L+ TTSS+CN
Sbjct: 323 MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 382

Query: 61  SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
           SKPDI ETFP  NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 383 SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 442

Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
           KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 443 KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 502

Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
           HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 503 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 562

Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
            Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 563 RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 622

Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
           D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 623 DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 682

Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
           LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 683 LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 742

Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEK 480
           GDSQG IPLYGKWQLEPLQLP A++GIVPK                  NERGQVDVWSEK
Sbjct: 743 GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEK 802

Query: 481 CLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAY 540
           CLPPGTVHIRLPRVFSVAK+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 803 CLPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETY 862

Query: 541 NEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKG 600
           NEEAERMEAEERR REKQAISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+G
Sbjct: 863 NEEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEG 922

Query: 601 NADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCP 653
           NAD+PSCQ+DAEPFK  QDNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC 
Sbjct: 923 NADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCH 982

BLAST of Cla009159 vs. NCBI nr
Match: gi|659121189|ref|XP_008460539.1| (PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X5 [Cucumis melo])

HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 584/670 (87.16%), Postives = 611/670 (91.19%), Query Frame = 1

Query: 1   MVDKVEPVDKDSLTSRCRDKKDNLHKSTSGDNCERNAVNLARKKIHVLDELTCTTSSSCN 60
           MVDK E VDKDSLTS C DKKDN  K TSGDN E NAVNL  KK+HVLD+L+ TTSS+CN
Sbjct: 264 MVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCN 323

Query: 61  SKPDIPETFPPNNSQVPKRKGDVEFEMQLQMALSATAVETMPRSSSINYSNEPPLNFPSP 120
           SKPDI ETFP  NSQV KRKGD+EFEMQLQMALSATAVETMPR+SSIN+SNEPPLNF SP
Sbjct: 324 SKPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSP 383

Query: 121 KKLKRIVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGE 180
           KKLKRI NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGE
Sbjct: 384 KKLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGE 443

Query: 181 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILE 240
           HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWWDNVLAPLRILE
Sbjct: 444 HKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILE 503

Query: 241 GQVVGGSGHLEKSCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDR 300
            Q VGG+GHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDR
Sbjct: 504 RQAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDR 563

Query: 301 DCSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPV 360
           D S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPV
Sbjct: 564 DFSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPV 623

Query: 361 LGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPAKELKRSIKKIKVLESEADDFDQ 420
           LGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELP KELKRSIKKIKVLESEADDFDQ
Sbjct: 624 LGFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQ 683

Query: 421 GDSQGVIPLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEK 480
           GDSQG IPLYGKWQLEPLQLP A++GIVPK                  NERGQVDVWSEK
Sbjct: 684 GDSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEK 743

Query: 481 CLPPGTVHIRLPRVFSVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAY 540
           CLPPGTVHIRLPRVFSVAK+LEIDYAPA+VGFEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 744 CLPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETY 803

Query: 541 NEEAERMEAEERRHREKQAISRWYQLLSSILTRQRLSSRYGDSENPLQVASDVRGTHDKG 600
           NEEAERMEAEERR REKQAISRWYQLLSSI+TRQRL+SRYGDSENP QV S ++G HD+G
Sbjct: 804 NEEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEG 863

Query: 601 NADIPSCQDDAEPFKLHQDNVSNTNIDAPSFNNQEDHKHVFLLEDQIVDEKSLVVTKRCP 653
           NAD+PSCQ+DAEPFK  QDNVSN N+D+PSF NQEDHKHVFLLED+I DEKSLVVTKRC 
Sbjct: 864 NADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCH 923

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RAD4_ARATH2.9e-13845.84DNA repair protein RAD4 OS=Arabidopsis thaliana GN=RAD4 PE=1 SV=1[more]
XPC_HUMAN3.6e-4835.66DNA repair protein complementing XP-C cells OS=Homo sapiens GN=XPC PE=1 SV=4[more]
XPC_MOUSE1.4e-4740.16DNA repair protein complementing XP-C cells homolog OS=Mus musculus GN=Xpc PE=1 ... [more]
XPC_DROME4.5e-4336.51DNA repair protein complementing XP-C cells homolog OS=Drosophila melanogaster G... [more]
RHP41_SCHPO2.3e-2331.92DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ... [more]
Match NameE-valueIdentityDescription
A0A0A0KQC2_CUCSA0.0e+0088.50Uncharacterized protein OS=Cucumis sativus GN=Csa_5G424880 PE=4 SV=1[more]
A0A061ENL1_THECC4.2e-20558.81DNA repair protein xp-C / rad4, putative isoform 1 OS=Theobroma cacao GN=TCM_019... [more]
A0A061EFW6_THECC4.2e-20558.81DNA repair protein xp-C / rad4, putative isoform 2 OS=Theobroma cacao GN=TCM_019... [more]
W9S159_9ROSA3.7e-20156.84DNA repair protein complementing XP-C cell OS=Morus notabilis GN=L484_027190 PE=... [more]
B9H3A4_POPTR1.2e-19958.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s08580g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
gi|659121183|ref|XP_008460535.1|0.0e+0089.57PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X2 [Cucum... [more]
gi|659121181|ref|XP_008460534.1|0.0e+0087.16PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X1 [Cucum... [more]
gi|659121185|ref|XP_008460536.1|0.0e+0087.16PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X3 [Cucum... [more]
gi|659121187|ref|XP_008460538.1|0.0e+0087.16PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X4 [Cucum... [more]
gi|659121189|ref|XP_008460539.1|0.0e+0087.16PREDICTED: DNA repair protein complementing XP-C cells homolog isoform X5 [Cucum... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004583DNA_repair_Rad4
IPR018325Rad4/PNGase_transGLS-fold
IPR018326Rad4_beta-hairpin_dom1
IPR018327BHD_2
IPR018328Rad4_beta-hairpin_dom3
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0006298 mismatch repair
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000111 nucleotide-excision repair factor 2 complex
cellular_component GO:0071942 XPC complex
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003697 single-stranded DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla009159Cla009159.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004583DNA repair protein Rad4PANTHERPTHR12135DNA REPAIR PROTEIN XP-C / RAD4coord: 54..244
score: 2.2E-187coord: 312..652
score: 2.2E
IPR018325Rad4/PNGase transglutaminase-like foldPFAMPF03835Rad4coord: 120..237
score: 3.5
IPR018326Rad4 beta-hairpin domain 1PFAMPF10403BHD_1coord: 326..375
score: 6.3
IPR018326Rad4 beta-hairpin domain 1SMARTSM01030BHD_1_2coord: 325..376
score: 1.4
IPR018327Rad4 beta-hairpin domain 2PFAMPF10404BHD_2coord: 379..441
score: 1.2
IPR018327Rad4 beta-hairpin domain 2SMARTSM01031BHD_2_2coord: 378..441
score: 2.
IPR018328Rad4 beta-hairpin domain 3PFAMPF10405BHD_3coord: 448..520
score: 5.9
IPR018328Rad4 beta-hairpin domain 3SMARTSM01032BHD_3_2coord: 448..522
score: 1.1
NoneNo IPR availableunknownCoilCoilcoord: 519..539
scor
NoneNo IPR availablePANTHERPTHR12135:SF0DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLScoord: 54..244
score: 2.2E-187coord: 312..652
score: 2.2E
NoneNo IPR availableunknownSSF54001Cysteine proteinasescoord: 150..236
score: 4.9