Cla009105 (gene) Watermelon (97103) v1

Overview
NameCla009105
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAuxin response factor 8-1 (AHRD V1 ***- E0A8P3_SOLLC); contains Interpro domain(s) IPR003340 Transcriptional factor B3
LocationChr1 : 22451906 .. 22453880 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGTATGATTCCCTTTCTTTGCTTTTTTATGTTGGTTTTGTTTTGGTTTACTGTTTCAATTTGGGACGATGGAACTCCTGTTTTGAATTGTTATTGTTATTATTATTATGTGCCTTTTTTCATTTTGTTGTTTGTTTTTCCTCCCTATATTAAATGCTATGGTTCCCTCGTCTCCCGCCATAAATTTTGATCTTCTGTGCTGCACTTTAATTATGGCGTTGTAATGATGGTGATGATTATAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTCCCAACTGCTGGGACTCGGGTTGTCTACTTCCCTCAGGGTCACAGCGAACAGGTTCCATGGTTTTTTTTTTTTTTTTTTTTTTTTAGTTTGAAAATATAACTTTCCATTTTTGCGGCTATCTTTTTCTTTGTATGGGGAAAAGTTGAGAAATACCTTAATTAACTTAGTTGCCATTGCATAAGCCTGTGAAATTGAAAGGACTTCTCTGTCAATTTGTTTGTCTGTAGGTTGCTGCCACGACCAATAAAGAAGTTGATGGGCACATACCCAATTACCCGAACCTACCTCCCCAGTTGATATGTCAACTTCACAACGTTACAATGCATGTGAGTTCTCTTTTTCTCATGTAATTTGAGTGTGTTTAGCCTTCATTGTGTGATTAATGTTTCTAATGCGTAAATCTTTCATTAATCTCTTATTAATGATTAATGAGGAAATTAGATTATTAAAGTAAGGAGAACTCTTAAGCAGGATTTGTGTATATGACATTTCAGGCAGATGTGGAAACGGATGAAGTATATGCCCAGATGACATTACAGCCTCTGACTGCAGTAAACTATCTTTACAACTCTGTTTCTCTTTCAGTTCTTCTTGCCACATTTTTTAATACCTTAGCTCAATTTATTTTATACATACAGCAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCTAGTAGACAGCCAACAAATTACTTTTGCAAAACGTTGACAGCAAGTGATACAAGCACCCATGGAGGATTTTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCACTGGTACATACATATATTCTGTTATATGATTTTGTTGGATCTGATGGATGAATTTTGGCATCTTTCTCTGGTATGGTGCTGCAGGATTTTTCACAACAGCCACCAGCACAAGAGCTGATTGCAAGGGACCTTCATGATGTCGAATGGAAGTTTAGGCATATTTTTCGAGGTAAGTCCCTTGATGTTCTGTCCATTTGTGGAAATAAGTGTGATGGTTTTCTTTGTTAATGGTTTCTAGTTTATCAACCAATTTTTTTGTATTGTTGGTTAAGCACTCAGATTTAGGTGGCATTTGAAATGAAACTGTTAAGAATCATTTTTTGCTTTCGCTACAAAGTGATAGTGATATCAAGTTTATCAAATGTAAGGCACTTTGTTTTGTAAAAAAAAAAAGTAACTCACTTCCAAGAGAGTTTGGTTCGTACTATGAGTACGAACATTGAATTACATTTTGTCTCTGAATCAGAGCAAAGGTTAACGATTAATTGGTTCCTGAGTAATGAAATTAAACTTAAGTAGTAGGAAAAATGCAGATGACGAGAACTGAATTACCTCATTAATTATTGGGAAGTAAAGAACCAAACCGTTGATGAAAAGGAAATTCAGAGCACTTCAGTTTCAAGAATATTTCTTGGAATTTAAGAGGTTCTGTTACAGGACACTTGGTCAGTCCAATTTGATAGATCTCTTGTCAGAGAGTTATGAACCTCTAGATTCATTGGGTGGTCTTCTTAGAAGTTGACGGTGTTGCTGGGGGTATCCAAGTGATATGGCTAGAGAGATTGATGAAAGTTGCCGATTTTGTTCAATGTTCATGGTTCCATTTGCTTCTTTGA

mRNA sequence

ATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTCCCAACTGCTGGGACTCGGGTTGTCTACTTCCCTCAGGGTCACAGCGAACAGGTTGCTGCCACGACCAATAAAGAAGTTGATGGGCACATACCCAATTACCCGAACCTACCTCCCCAGTTGATATGTCAACTTCACAACGTTACAATGCATGCAGATGTGGAAACGGATGAAGTATATGCCCAGATGACATTACAGCCTCTGACTGCACAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCTAGTAGACAGCCAACAAATTACTTTTGCAAAACGTTGACAGCAAGTGATACAAGCACCCATGGAGGATTTTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCACTGGATTTTTCACAACAGCCACCAGCACAAGAGCTGATTGCAAGGGACCTTCATGATGTCGAATGGAAGTTTAGGCATATTTTTCGAGAAGTTGACGGTGTTGCTGGGGGTATCCAAGTGATATGGCTAGAGAGATTGATGAAAGTTGCCGATTTTGTTCAATGTTCATGGTTCCATTTGCTTCTTTGA

Coding sequence (CDS)

ATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTCCCAACTGCTGGGACTCGGGTTGTCTACTTCCCTCAGGGTCACAGCGAACAGGTTGCTGCCACGACCAATAAAGAAGTTGATGGGCACATACCCAATTACCCGAACCTACCTCCCCAGTTGATATGTCAACTTCACAACGTTACAATGCATGCAGATGTGGAAACGGATGAAGTATATGCCCAGATGACATTACAGCCTCTGACTGCACAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCTAGTAGACAGCCAACAAATTACTTTTGCAAAACGTTGACAGCAAGTGATACAAGCACCCATGGAGGATTTTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCACTGGATTTTTCACAACAGCCACCAGCACAAGAGCTGATTGCAAGGGACCTTCATGATGTCGAATGGAAGTTTAGGCATATTTTTCGAGAAGTTGACGGTGTTGCTGGGGGTATCCAAGTGATATGGCTAGAGAGATTGATGAAAGTTGCCGATTTTGTTCAATGTTCATGGTTCCATTTGCTTCTTTGA

Protein sequence

MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFREVDGVAGGIQVIWLERLMKVADFVQCSWFHLLL
Homology
[Close]
BLAST of Cla009105 vs. Swiss-Prot
Match: ARFH_ARATH (Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2)

HSP 1 Score: 352.8 bits (904), Expect = 2.6e-96
Identity = 166/185 (89.73%), Postives = 177/185 (95.68%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSG GQQ HEG  +KCLNSELWHACAGPLVSLP++G+RVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGLGQQGHEG--EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT +EQK+TF+P+ELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 183

[Close]
BLAST of Cla009105 vs. Swiss-Prot
Match: ARFF_ARATH (Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=1 SV=2)

HSP 1 Score: 338.2 bits (866), Expect = 6.7e-92
Identity = 161/186 (86.56%), Postives = 170/186 (91.40%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHE-GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN 60
           M+LS++GF  Q HE  GEK+ LNSELWHACAGPLVSLP  G+RVVYFPQGHSEQVAA+TN
Sbjct: 1   MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60

Query: 61  KEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGI 120
           KEVD HIPNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPL AQEQKD +LP ELG+
Sbjct: 61  KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV 120

Query: 121 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWK 180
           PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHD EWK
Sbjct: 121 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK 180

Query: 181 FRHIFR 186
           FRHIFR
Sbjct: 181 FRHIFR 186

[Close]
BLAST of Cla009105 vs. Swiss-Prot
Match: ARFL_ORYSI (Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.9e-88
Identity = 150/169 (88.76%), Postives = 158/169 (93.49%), Query Frame = 1 

Query: 17  EKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQL 76
           EKKCLNSELWHACAGPLV LPT GTRVVYFPQGHSEQVAA+TNKEV+GHIPNYPNLP QL
Sbjct: 24  EKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQL 83

Query: 77  ICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASD 136
           ICQLH+VTMHADVETDEVYAQMTLQPL  QEQ D +LP E+GI S+QPTNYFCKTLTASD
Sbjct: 84  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASD 143

Query: 137 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFR 186
           TSTHGGFSVPRRAAE+VFPPLDF+QQPPAQELIARD+HD+EWKFRHIFR
Sbjct: 144 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFR 192

[Close]
BLAST of Cla009105 vs. Swiss-Prot
Match: ARFL_ORYSJ (Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.9e-88
Identity = 150/169 (88.76%), Postives = 158/169 (93.49%), Query Frame = 1 

Query: 17  EKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQL 76
           EKKCLNSELWHACAGPLV LPT GTRVVYFPQGHSEQVAA+TNKEV+GHIPNYPNLP QL
Sbjct: 24  EKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQL 83

Query: 77  ICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASD 136
           ICQLH+VTMHADVETDEVYAQMTLQPL  QEQ D +LP E+GI S+QPTNYFCKTLTASD
Sbjct: 84  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASD 143

Query: 137 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFR 186
           TSTHGGFSVPRRAAE+VFPPLDF+QQPPAQELIARD+HD+EWKFRHIFR
Sbjct: 144 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFR 192

[Close]
BLAST of Cla009105 vs. Swiss-Prot
Match: ARFY_ORYSJ (Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25 PE=2 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.8e-87
Identity = 151/170 (88.82%), Postives = 157/170 (92.35%), Query Frame = 1 

Query: 16  GEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQ 75
           GE++CLNSELWHACAGPLVSLP   +RVVYFPQGHSEQVAA+TNKEVD  IPNYPNLPPQ
Sbjct: 20  GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 79

Query: 76  LICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTAS 135
           LICQLHNVTMHAD ETDEVYAQMTLQPL+ +EQK+ FLPMELG  S+QPTNYFCKTLTAS
Sbjct: 80  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTAS 139

Query: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFR 186
           DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHD EWKFRHIFR
Sbjct: 140 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFR 189

[Close]
BLAST of Cla009105 vs. TrEMBL
Match: A0A0A0KR68_CUCSA (Auxin response factor OS=Cucumis sativus GN=Csa_5G315370 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 6.3e-105
Identity = 183/185 (98.92%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA+DLHD+EWKF
Sbjct: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. TrEMBL
Match: A0A0L9UW76_PHAAN (Auxin response factor OS=Phaseolus angularis GN=LR48_Vigan07g081400 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.5e-101
Identity = 178/185 (96.22%), Postives = 182/185 (98.38%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSG GQQ HEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN+
Sbjct: 1   MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNR 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT QEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. TrEMBL
Match: V7BBY2_PHAVU (Auxin response factor OS=Phaseolus vulgaris GN=PHAVU_008G242400g PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.5e-101
Identity = 178/185 (96.22%), Postives = 182/185 (98.38%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSG GQQ HEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN+
Sbjct: 1   MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNR 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT QEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. TrEMBL
Match: A0A0S3RL29_PHAAN (Auxin response factor OS=Vigna angularis var. angularis GN=Vigan.03G101200 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.5e-101
Identity = 178/185 (96.22%), Postives = 182/185 (98.38%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSG GQQ HEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN+
Sbjct: 1   MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNR 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT QEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. TrEMBL
Match: I1LM27_SOYBN (Auxin response factor OS=Glycine max GN=GLYMA_11G204200 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.5e-101
Identity = 176/185 (95.14%), Postives = 182/185 (98.38%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSG GQQ HEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN+
Sbjct: 1   MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNR 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           E+DGHIPNYP+LPPQLICQLHN+TMHADVETDEVYAQMTLQPLT QEQKDTFLPMELGIP
Sbjct: 61  EIDGHIPNYPSLPPQLICQLHNITMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. NCBI nr
Match: gi|778702056|ref|XP_011655128.1| (PREDICTED: auxin response factor 8 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 9.0e-105
Identity = 183/185 (98.92%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA+DLHD+EWKF
Sbjct: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. NCBI nr
Match: gi|700195715|gb|KGN50892.1| (hypothetical protein Csa_5G315370 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 9.0e-105
Identity = 183/185 (98.92%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA+DLHD+EWKF
Sbjct: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. NCBI nr
Match: gi|659126331|ref|XP_008463127.1| (PREDICTED: auxin response factor 8 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 9.0e-105
Identity = 183/185 (98.92%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA+DLHD+EWKF
Sbjct: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. NCBI nr
Match: gi|965665833|dbj|BAT81321.1| (hypothetical protein VIGAN_03101200 [Vigna angularis var. angularis])

HSP 1 Score: 377.1 bits (967), Expect = 2.1e-101
Identity = 178/185 (96.22%), Postives = 182/185 (98.38%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSG GQQ HEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN+
Sbjct: 1   MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNR 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT QEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

[Close]
BLAST of Cla009105 vs. NCBI nr
Match: gi|920703885|gb|KOM47110.1| (hypothetical protein LR48_Vigan07g081400 [Vigna angularis])

HSP 1 Score: 377.1 bits (967), Expect = 2.1e-101
Identity = 178/185 (96.22%), Postives = 182/185 (98.38%), Query Frame = 1 

Query: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60
           MKLSTSG GQQ HEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN+
Sbjct: 1   MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNR 60

Query: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT QEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIP 120

Query: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 181 RHIFR 186
           RHIFR
Sbjct: 181 RHIFR 185

The following BLAST results are available for this feature:
BLAST of Cla009105 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARFH_ARATH2.6e-9689.73Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2[more]
ARFF_ARATH6.7e-9286.56Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=1 SV=2[more]
ARFL_ORYSI5.9e-8888.76Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12 PE=3 SV=1[more]
ARFL_ORYSJ5.9e-8888.76Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12 PE=2 SV=1[more]
ARFY_ORYSJ3.8e-8788.82Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25 PE=2 SV=1[more]
BLAST of Cla009105 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR68_CUCSA6.3e-10598.92Auxin response factor OS=Cucumis sativus GN=Csa_5G315370 PE=3 SV=1[more]
A0A0L9UW76_PHAAN1.5e-10196.22Auxin response factor OS=Phaseolus angularis GN=LR48_Vigan07g081400 PE=3 SV=1[more]
V7BBY2_PHAVU1.5e-10196.22Auxin response factor OS=Phaseolus vulgaris GN=PHAVU_008G242400g PE=3 SV=1[more]
A0A0S3RL29_PHAAN1.5e-10196.22Auxin response factor OS=Vigna angularis var. angularis GN=Vigan.03G101200 PE=3 ... [more]
I1LM27_SOYBN2.5e-10195.14Auxin response factor OS=Glycine max GN=GLYMA_11G204200 PE=3 SV=1[more]
BLAST of Cla009105 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778702056|ref|XP_011655128.1|9.0e-10598.92PREDICTED: auxin response factor 8 [Cucumis sativus][more]
gi|700195715|gb|KGN50892.1|9.0e-10598.92hypothetical protein Csa_5G315370 [Cucumis sativus][more]
gi|659126331|ref|XP_008463127.1|9.0e-10598.92PREDICTED: auxin response factor 8 [Cucumis melo][more]
gi|965665833|dbj|BAT81321.1|2.1e-10196.22hypothetical protein VIGAN_03101200 [Vigna angularis var. angularis][more]
gi|920703885|gb|KOM47110.1|2.1e-10196.22hypothetical protein LR48_Vigan07g081400 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009908 flower development
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla009105Cla009105.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 121..186
score: 6.0
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 112..186
score: 3.14
NoneNo IPR availablePANTHERPTHR31384FAMILY NOT NAMEDcoord: 1..185
score: 5.0E
NoneNo IPR availablePANTHERPTHR31384:SF2AUXIN RESPONSE FACTOR 8coord: 1..185
score: 5.0E