Cla009093 (gene) Watermelon (97103) v1

Overview
NameCla009093
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionATP-dependent RNA helicase (AHRD V1 **** F8NWR9_SERL9); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
LocationChr1 : 22290178 .. 22291755 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTACCGGCTACTAGCGACGAGTCGACCACCGCCACTGTCACCGTCGGCTCGAGTTCTGCCCCACCTGTGCCCAAACGAGCTTGGGGCGATGAAGATGATGATGTGGGTGAACACTTGGAATCCCTTACAATAAATCTTGAAGAACCCGTGGACTCCGACATCTCGGTAACTCTCTCATTCTCTCCTTCAATTGTATTCGAAGTAGGAAGTAGAGCAATGCGGGGCTCCTTGTTATGCTATTCGTTTAATTATTTTCCATTTGGGGTAGGTGACAACCGGTGATACTCCATATACATCAGCCAGTTCTTTTGAGGATCTGAATCTGTCTCAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAACTTTACCCATGATCTTGACTCCTCCTTACAAGGATTTAATTGCTCAAGCTCATAATGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACTTGAAGGCTCCTCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGGTAAAAAGCTCTCTCTGATGTTTAACTGAATGCCTTTGGCTCTTATTTATGTTAGATCTTGATTTTTCTTTGATATAATTATTGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACACTGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCTAATTATGTACCCATGTCAAAGCGACCACCAATTACTGCGCAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTCGGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGTAAATTATTATGTATAGACTTTACATATTGTAGCATCTGTGTTCATGGAAGTAGTGATCTCCTCTTGATTTGTTTTTCAAGAACATAGTTTCTTAATGTATATAAACGTATCACTAATGATAGGCTAAGAGTAATAGTTATTTTGAGCAATTGTGAGGATGGATAAATTATAGTTATTTTTCCTTTTTTTAATTTTTTTTTAAAATTTTTTTATTCAGGATGGCTTTCAGGATGATTCGTTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTCTGTCTATACTATTAAATAACCATTTTGTAATCTCAACCATGTAATCTCAGTAATCTCATTCTTCCTTTTTTTTATTGTTAAAAACTTTGTTTCAGGTGCTTTTGTTCTCTGCTACATTTGATGAGAATGTTAAAAACTTCGTCTCTAGGGTTGTTAAAAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATACAAGTTGATATGTCCAGATGAATTAACTAAAATTCGACTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGCACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGATGTGACTACCATTCAAGGGGCACTGACGACTTAA

mRNA sequence

ATGGAATTACCGGCTACTAGCGACGAGTCGACCACCGCCACTGTCACCGTCGGCTCGAGTTCTGCCCCACCTGTGCCCAAACGAGCTTGGGGCGATGAAGATGATGATGTGGGTGAACACTTGGAATCCCTTACAATAAATCTTGAAGAACCCGTGGACTCCGACATCTCGGTGACAACCGGTGATACTCCATATACATCAGCCAGTTCTTTTGAGGATCTGAATCTGTCTCAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAACTTTACCCATGATCTTGACTCCTCCTTACAAGGATTTAATTGCTCAAGCTCATAATGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACTTGAAGGCTCCTCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACACTGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCTAATTATGTACCCATGTCAAAGCGACCACCAATTACTGCGCAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTCGGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGATGGCTTTCAGGATGATTCGTTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTGCTTTTGTTCTCTGCTACATTTGATGAGAATGTTAAAAACTTCGTCTCTAGGGTTGTTAAAAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATACAAGTTGATATGTCCAGATGAATTAACTAAAATTCGACTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGCACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGATGTGACTACCATTCAAGGGGCACTGACGACTTAA

Coding sequence (CDS)

ATGGAATTACCGGCTACTAGCGACGAGTCGACCACCGCCACTGTCACCGTCGGCTCGAGTTCTGCCCCACCTGTGCCCAAACGAGCTTGGGGCGATGAAGATGATGATGTGGGTGAACACTTGGAATCCCTTACAATAAATCTTGAAGAACCCGTGGACTCCGACATCTCGGTGACAACCGGTGATACTCCATATACATCAGCCAGTTCTTTTGAGGATCTGAATCTGTCTCAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAACTTTACCCATGATCTTGACTCCTCCTTACAAGGATTTAATTGCTCAAGCTCATAATGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACTTGAAGGCTCCTCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACACTGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCTAATTATGTACCCATGTCAAAGCGACCACCAATTACTGCGCAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTCGGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGATGGCTTTCAGGATGATTCGTTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTGCTTTTGTTCTCTGCTACATTTGATGAGAATGTTAAAAACTTCGTCTCTAGGGTTGTTAAAAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATACAAGTTGATATGTCCAGATGAATTAACTAAAATTCGACTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGCACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGATGTGACTACCATTCAAGGGGCACTGACGACTTAA

Protein sequence

MELPATSDESTTATVTVGSSSAPPVPKRAWGDEDDDVGEHLESLTINLEEPVDSDISVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTT
Homology
[Close]
BLAST of Cla009093 vs. Swiss-Prot
Match: RH38_ARATH (DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana GN=RH38 PE=1 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 2.1e-122
Identity = 234/372 (62.90%), Postives = 290/372 (77.96%), Query Frame = 1 

Query: 2   ELPATSDESTTATVTVGSSSA---PPVPKRAWGDEDDDVGEH-----LESLTIN------ 61
           ++P   + S+++TV   +S+    P   K+ WGD +DD  E      L SL+I       
Sbjct: 7   KVPTVVESSSSSTVEASNSAEKTEPTTEKKKWGDVEDDDDEEEAVSELNSLSIKEEEKPD 66

Query: 62  --LEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMI 121
             LEEP DS+I +VT+GDTPYTSAS FEDLNLS EL+KGLYVEM+F KPSKIQAI+LPMI
Sbjct: 67  SILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMI 126

Query: 122 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 181
           +TPP+K LIAQAHNGSGKTTCFVLGMLSRVD  L+ PQA CICPTRELA QN+EVL+KMG
Sbjct: 127 MTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMG 186

Query: 182 KYTGITSECAVPADSANYVPMSKR-PPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFD 241
           K+TGIT+E AVP DS    P + R  P++A VVIGTPGT+KKWM+ ++LG++ +KILVFD
Sbjct: 187 KFTGITAELAVP-DSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFD 246

Query: 242 EADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVK 301
           EADHML  DGF+DDSL+IM+DI R +P+ QVLLFSATF+E VK+FV+R V KD NQLFVK
Sbjct: 247 EADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTV-KDPNQLFVK 306

Query: 302 KEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDL 356
           +E+L+L+SVKQYK++CP E  KI +IKD+I EL D +GQTIIFV+T+ SA  +HKAL ++
Sbjct: 307 REDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGD-IGQTIIFVKTKASAQKVHKALAEM 366

[Close]
BLAST of Cla009093 vs. Swiss-Prot
Match: RH38_ORYSJ (DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica GN=Os03g0158200 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.9e-107
Identity = 206/325 (63.38%), Postives = 246/325 (75.69%), Query Frame = 1 

Query: 31  GDEDDDVGEHLESLTINLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGLYVEMR 90
           G   DD G  L      L++  +S I +VT+G T Y SA++FEDL L+ ELLKGL+ EM 
Sbjct: 67  GGGGDDQGPPL------LDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMG 126

Query: 91  FHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPT 150
           F +PSKIQA+TLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVD N K  QA CICPT
Sbjct: 127 FSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPT 186

Query: 151 RELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSS 210
           RELA QN  VL +MGK+TGIT  CA+P    +YVP++K P IT QVVIGT GT+ KW++ 
Sbjct: 187 RELAQQNKSVLMRMGKFTGITCACAIPPAQKDYVPIAKMPKITDQVVIGTSGTLMKWINH 246

Query: 211 RKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFV 270
           +K+  + +KILVFDEADHML EDGF+ DS RIMRDI+RS+  CQVLLFSATF+E VK+FV
Sbjct: 247 KKILTNDIKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKDFV 306

Query: 271 SRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRT 330
           +RV+ KD NQ+FVKKEEL+LE VKQYK+  PDE  KI +IKD+IFE   K+GQ IIFVRT
Sbjct: 307 TRVI-KDGNQIFVKKEELTLEKVKQYKVQVPDERAKIAVIKDKIFEFGQKVGQVIIFVRT 366

Query: 331 RNSAGMLHKALVDLGYDVTTIQGAL 355
           + S   +H AL    Y  ++IQG+L
Sbjct: 367 KQSTKDVHNALTLEDYVCSSIQGSL 384

[Close]
BLAST of Cla009093 vs. Swiss-Prot
Match: DBP5_KLULA (ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DBP5 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.8e-55
Identity = 123/325 (37.85%), Postives = 197/325 (60.62%), Query Frame = 1 

Query: 32  DEDDDVGEHLESLTINLEEPVDSDISVTTGD--TPYTSASSFEDLNLSQELLKGLYVEMR 91
           D  +   E   +  IN E  V  +++    D  +P  S  SFE+L LS+ELLKGLY  M+
Sbjct: 40  DAKETKAEEPANKVINSEYEVKVNLADLQADANSPLYSVKSFEELGLSEELLKGLYA-MK 99

Query: 92  FHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPT 151
           F KPSKIQ   LP+++  P  ++IAQ+ +G+GKT  F L ML+RVD N+ + QA C+ P 
Sbjct: 100 FQKPSKIQEKALPLLIRDPPHNMIAQSQSGTGKTAAFSLTMLTRVDPNVNSTQAICLSPA 159

Query: 152 RELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSS 211
           RELA Q +EV+++MGK+T  +S+  VP DS       +  PITA +V+GTPGT+   +  
Sbjct: 160 RELARQTLEVIQEMGKFTKTSSQLVVP-DS-----FERNKPITANIVVGTPGTVLDLIRR 219

Query: 212 RKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFV 271
           + L + S+K+ V DEAD+ML + G  D  +R+ + + ++   CQ++LFSATFD+ V+ + 
Sbjct: 220 KMLNLGSIKVFVLDEADNMLDKQGLGDQCIRVKKFLPKT---CQLVLFSATFDDGVRQYA 279

Query: 272 SRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRT 331
            +++    + L ++K E+++ ++KQ  + C +E  K  ++ +    L   +G +IIFV+T
Sbjct: 280 KKIIPTAVS-LELQKNEVNVSAIKQLFMDCDNEEHKYTILSELYGLLT--IGSSIIFVKT 339

Query: 332 RNSAGMLHKALVDLGYDVTTIQGAL 355
           + +A +L+  L   G+ V+ + G L
Sbjct: 340 KQTANLLYAKLKKEGHQVSILHGDL 351

[Close]
BLAST of Cla009093 vs. Swiss-Prot
Match: DBP5_ASHGO (ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP5 PE=3 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 8.2e-55
Identity = 135/344 (39.24%), Postives = 202/344 (58.72%), Query Frame = 1 

Query: 14  TVTVGSS-SAPPVPKRAWGDEDDDVGEHLESLTINLEEPVDSDISVTTGD--TPYTSASS 73
           T+  GS+ SAP  P       D ++        IN E  V   ++    D  +P  S  S
Sbjct: 27  TLEAGSAESAPSAPAENQAKSDSNL--------INSEYEVKVRLADIQADPNSPLYSVKS 86

Query: 74  FEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGM 133
           FE+L L+ ELLKGLY  M+F KPSKIQ   LP++L  P +++IAQ+ +G+GKT  F L M
Sbjct: 87  FEELGLAPELLKGLYA-MKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTM 146

Query: 134 LSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPP 193
           LSRVDV + A QA C+ P+RELA Q +EV+++MGK+T I S+  VP DS       K   
Sbjct: 147 LSRVDVAVPATQAICLAPSRELARQTLEVIQEMGKFTKIASQLIVP-DS-----YEKNKA 206

Query: 194 ITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSP 253
           I A +++GTPGT+   M  + + +  VK  V DEAD+ML + G  D  +R+ + + + + 
Sbjct: 207 INAHIIVGTPGTVLDLMRRKMIQLGKVKTFVLDEADNMLDKQGLGDQCIRVKKFLPKDT- 266

Query: 254 HCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIK 313
             Q++LFSATFD++V+ +  RVV  + N L +++ E+++ ++KQ  + C DE  K  ++ 
Sbjct: 267 --QLVLFSATFDDSVREYARRVV-PNANSLELQRNEVNVSAIKQLFMDCNDERHKFTVLC 326

Query: 314 DRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGAL 355
           D    L   +G +IIFV+T+ +A ML+  L   G+ V+ + G L
Sbjct: 327 DLYGLLT--IGSSIIFVQTKQTANMLYTELKREGHQVSILHGDL 349

[Close]
BLAST of Cla009093 vs. Swiss-Prot
Match: DBP5_LODEL (ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=DBP5 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.3e-54
Identity = 124/327 (37.92%), Postives = 192/327 (58.72%), Query Frame = 1 

Query: 28  RAWGDEDDDVGEHLESLTINLEEPVDSDISVTTGDTPYTSASSFEDLNLSQELLKGLYVE 87
           ++  +  DD       +    E  V  D      ++P  S  SFE+L L  ELLKGLY  
Sbjct: 75  KSQSEAKDDSKRETNLIENRYEVEVKLDDIQADPNSPLYSVKSFEELGLKPELLKGLYA- 134

Query: 88  MRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCIC 147
           M+F+KPSKIQ   LP++++ P K++I Q+ +G+GKT  F L MLSRVD ++KAPQ  C+ 
Sbjct: 135 MKFNKPSKIQERALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRVDESIKAPQCICLA 194

Query: 148 PTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWM 207
           PTRELA Q +EV++ MGKY+ IT +  VP    + VP  +   I+AQV++GTPG +   +
Sbjct: 195 PTRELARQTLEVVETMGKYSNITYQLVVP----DSVPRGQ--AISAQVLVGTPGIVHDLI 254

Query: 208 SSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKN 267
           + + + V+ VK+ V DEAD+ML   G  D  LR+ + + R    CQ++LFSATF   V+ 
Sbjct: 255 NRKAINVAKVKVFVLDEADNMLDAQGLADTCLRVKKRLPRD---CQLVLFSATFPTEVRK 314

Query: 268 FVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFV 327
           +  + V  + N L +K+EEL+++ +KQ  + C ++  K  ++ +    L   +G +IIFV
Sbjct: 315 YAEKFV-PNANSLALKQEELNVKGIKQLYMDCKNQEHKFEVLCELYGLLT--IGSSIIFV 374

Query: 328 RTRNSAGMLHKALVDLGYDVTTIQGAL 355
             + +A  L+  + + G+ V+ + G L
Sbjct: 375 EQKATADSLYLRMKEEGHTVSILHGGL 388

[Close]
BLAST of Cla009093 vs. TrEMBL
Match: A0A0A0KR39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G308770 PE=4 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 3.6e-174
Identity = 324/372 (87.10%), Postives = 338/372 (90.86%), Query Frame = 1 

Query: 6   TSDESTTATVTVGSSSAPP-----VPKRAWGDEDDD-----------VGEHLESLTI--- 65
           TS  +  A  T  SSSAPP     VPKRAWGDE+DD             E+LESL I   
Sbjct: 11  TSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQDD 70

Query: 66  -NLEEPVDSDIS-VTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMI 125
            NLEEP+DS+I+ VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEM+FHKPSKIQAI+LPMI
Sbjct: 71  TNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMI 130

Query: 126 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 185
           LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG
Sbjct: 131 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 190

Query: 186 KYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDE 245
           KYTGITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDE
Sbjct: 191 KYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSCVKILVFDE 250

Query: 246 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK 305
           ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Sbjct: 251 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV-KDYNQLFVKK 310

Query: 306 EELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 357
           EELSLESVKQYKLICPDELTKIR+IKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG
Sbjct: 311 EELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 370

[Close]
BLAST of Cla009093 vs. TrEMBL
Match: A0A0A0LDT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G746560 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 2.3e-160
Identity = 304/371 (81.94%), Postives = 326/371 (87.87%), Query Frame = 1 

Query: 6   TSDESTTATVTVGSSSAP----PVPKRAWGDEDD-----DVG-------EHLESLTIN-- 65
           T+D    AT+T   ++AP    P+PKR WGDE+      D G       E +ESL I   
Sbjct: 11  TNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVMESLKIEDE 70

Query: 66  --LEEPVDSDIS-VTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMI 125
             LEEP+DS+I+ VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEMRFHKPSKIQAI+LPMI
Sbjct: 71  TTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMI 130

Query: 126 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 185
           LTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG
Sbjct: 131 LTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 190

Query: 186 KYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDE 245
           KYTGITSECAVPADSANY+P+SKRPP TAQVVIGTPGTIKKWMS RKLGVS VKILVFDE
Sbjct: 191 KYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSCVKILVFDE 250

Query: 246 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK 305
           ADHMLGEDGFQD SLRIMRDIERSS H QVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Sbjct: 251 ADHMLGEDGFQDYSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVV-KDYNQLFVKK 310

Query: 306 EELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 356
           EELSLESVKQ+KLICP+E TKIR+IKDRIFELADKLGQTIIFV TR SAG+LHKALVDLG
Sbjct: 311 EELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLHKALVDLG 370

[Close]
BLAST of Cla009093 vs. TrEMBL
Match: A0A061ETP8_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_022361 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.1e-142
Identity = 268/382 (70.16%), Postives = 308/382 (80.63%), Query Frame = 1 

Query: 7   SDESTTATVTVGSSSAPP---------VPKRAWGDEDDDVGEH----------------L 66
           +D +T  +    ++  PP          PKR W D +DD  E                 +
Sbjct: 2   ADTATPTSTAAAAAEVPPPQEAKKATEAPKR-WADVEDDPPEESSASLASEEKGAPELDV 61

Query: 67  ESLTIN--------LEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHK 126
           E+L I+        L+EP DS+I +VT  DTPYTSAS+FE+L LS ELLKGLYVEM+F K
Sbjct: 62  ENLAIDENRKINKFLDEPEDSNIKAVTPWDTPYTSASTFEELKLSPELLKGLYVEMKFEK 121

Query: 127 PSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTREL 186
           PSKIQAI+LPMILTPPY DLIAQAHNGSGKTTCF LGMLSRVD NLKAPQA CICPTREL
Sbjct: 122 PSKIQAISLPMILTPPYMDLIAQAHNGSGKTTCFTLGMLSRVDPNLKAPQALCICPTREL 181

Query: 187 AMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKL 246
           A+QN+EVL+KMGK+TGITSECA+P DS+NY+P++KRPPITAQVVIGTPGTIKKWMS++KL
Sbjct: 182 AIQNLEVLRKMGKHTGITSECAIPMDSSNYLPINKRPPITAQVVIGTPGTIKKWMSAKKL 241

Query: 247 GVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRV 306
           GVS VKILVFDEADHML EDGF+DDSLRIMRDIER S +CQVLLFSATF E VKNFVSR+
Sbjct: 242 GVSCVKILVFDEADHMLAEDGFKDDSLRIMRDIERISSNCQVLLFSATFSETVKNFVSRI 301

Query: 307 VKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNS 355
           VK+D+NQLFVKKEELSLESVKQYK+  PDEL+K+ +IK+RIFE  ++LGQTIIFVRTRNS
Sbjct: 302 VKRDHNQLFVKKEELSLESVKQYKVNVPDELSKVTVIKERIFEFGERLGQTIIFVRTRNS 361

[Close]
BLAST of Cla009093 vs. TrEMBL
Match: D6N3H0_GOSHI (RNA helicase-like protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 2.0e-140
Identity = 260/378 (68.78%), Postives = 305/378 (80.69%), Query Frame = 1 

Query: 6   TSDESTTATVTVGSSSAPPVPKRA------WGDEDDDVGEH--------------LESLT 65
           T+  S  +T T   + AP   K+       W D +D+  E               +E+L 
Sbjct: 4   TASNSAPSTTTTAEAPAPQETKKTTEAPVRWADLEDEASEEPSALSEDKGAPELGVENLK 63

Query: 66  IN--------LEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKI 125
           I+        L+EP DS+I +VT G+TPYTSA +FE+LNLS ELLKGLYVEM+F KPSKI
Sbjct: 64  IDESKKINKFLDEPEDSNIKAVTAGETPYTSAFTFEELNLSPELLKGLYVEMKFEKPSKI 123

Query: 126 QAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 185
           QAI+LPMILTPP+ DLIAQAHNGSGKTTCF LGMLSRVD NLKAPQA CICPTRELA+QN
Sbjct: 124 QAISLPMILTPPHLDLIAQAHNGSGKTTCFTLGMLSRVDPNLKAPQALCICPTRELAIQN 183

Query: 186 IEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSS 245
           +EVL+KMGK+TGITSECA+P DS+NY+P++KR PI AQVVIGTPGTIKKWMS++KLGVS+
Sbjct: 184 LEVLRKMGKHTGITSECAIPMDSSNYIPINKRAPIIAQVVIGTPGTIKKWMSAKKLGVSN 243

Query: 246 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKD 305
           VK+LVFDEADHML EDGF+DDSLRIMRDIE+ S HCQVLLFSATF + VKNFVS++VK+D
Sbjct: 244 VKVLVFDEADHMLAEDGFKDDSLRIMRDIEKMSSHCQVLLFSATFSDTVKNFVSKIVKRD 303

Query: 306 YNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGML 355
           +NQLFVKKEELSLESVKQYK+  PDEL+K+ +IKDRI E  ++LGQTIIFVRTRNSA ML
Sbjct: 304 HNQLFVKKEELSLESVKQYKVNVPDELSKVLVIKDRILEFGERLGQTIIFVRTRNSASML 363

[Close]
BLAST of Cla009093 vs. TrEMBL
Match: A0A0D2U2X0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G410800 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 2.0e-140
Identity = 260/378 (68.78%), Postives = 305/378 (80.69%), Query Frame = 1 

Query: 6   TSDESTTATVTVGSSSAPPVPKRA------WGDEDDDVGEH--------------LESLT 65
           T+  S  +T T   + AP   K+       W D +D+  E               +E+L 
Sbjct: 4   TASNSAPSTTTTAEAPAPQETKKTTEAPVRWADLEDEASEEPSALSEDKGAPELGVENLK 63

Query: 66  IN--------LEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKI 125
           I+        L+EP DS+I +VT G+TPYTSA +FE+LNLS ELLKGLYVEM+F KPSKI
Sbjct: 64  IDESKKINKFLDEPEDSNIKAVTAGETPYTSAFTFEELNLSPELLKGLYVEMKFEKPSKI 123

Query: 126 QAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 185
           QAI+LPMILTPP+ DLIAQAHNGSGKTTCF LGMLSRVD NLKAPQA CICPTRELA+QN
Sbjct: 124 QAISLPMILTPPHLDLIAQAHNGSGKTTCFTLGMLSRVDPNLKAPQALCICPTRELAIQN 183

Query: 186 IEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSS 245
           +EVL+KMGK+TGITSECA+P DS+NY+P++KR P+ AQVVIGTPGTIKKWMS++KLGVS+
Sbjct: 184 LEVLRKMGKHTGITSECAIPMDSSNYIPINKRAPVIAQVVIGTPGTIKKWMSAKKLGVSN 243

Query: 246 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKD 305
           VKILVFDEADHML EDGF+DDSLRIMRDIE+ S HCQVLLFSATF + VKNFVS++VK+D
Sbjct: 244 VKILVFDEADHMLAEDGFKDDSLRIMRDIEKMSSHCQVLLFSATFSDTVKNFVSKIVKRD 303

Query: 306 YNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGML 355
           +NQLFVKKEELSLESVKQYK+  PDEL+K+ +IKDRI E  ++LGQTIIFVRTRNSA ML
Sbjct: 304 HNQLFVKKEELSLESVKQYKVNVPDELSKVLVIKDRILEFGERLGQTIIFVRTRNSASML 363

[Close]
BLAST of Cla009093 vs. NCBI nr
Match: gi|778702002|ref|XP_004150128.2| (PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus])

HSP 1 Score: 619.0 bits (1595), Expect = 5.1e-174
Identity = 324/372 (87.10%), Postives = 338/372 (90.86%), Query Frame = 1 

Query: 6   TSDESTTATVTVGSSSAPP-----VPKRAWGDEDDD-----------VGEHLESLTI--- 65
           TS  +  A  T  SSSAPP     VPKRAWGDE+DD             E+LESL I   
Sbjct: 11  TSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQDD 70

Query: 66  -NLEEPVDSDIS-VTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMI 125
            NLEEP+DS+I+ VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEM+FHKPSKIQAI+LPMI
Sbjct: 71  TNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMI 130

Query: 126 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 185
           LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG
Sbjct: 131 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 190

Query: 186 KYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDE 245
           KYTGITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDE
Sbjct: 191 KYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSCVKILVFDE 250

Query: 246 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK 305
           ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Sbjct: 251 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV-KDYNQLFVKK 310

Query: 306 EELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 357
           EELSLESVKQYKLICPDELTKIR+IKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG
Sbjct: 311 EELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 370

[Close]
BLAST of Cla009093 vs. NCBI nr
Match: gi|700195695|gb|KGN50872.1| (hypothetical protein Csa_5G308770 [Cucumis sativus])

HSP 1 Score: 619.0 bits (1595), Expect = 5.1e-174
Identity = 324/372 (87.10%), Postives = 338/372 (90.86%), Query Frame = 1 

Query: 6   TSDESTTATVTVGSSSAPP-----VPKRAWGDEDDD-----------VGEHLESLTI--- 65
           TS  +  A  T  SSSAPP     VPKRAWGDE+DD             E+LESL I   
Sbjct: 11  TSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQDD 70

Query: 66  -NLEEPVDSDIS-VTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMI 125
            NLEEP+DS+I+ VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEM+FHKPSKIQAI+LPMI
Sbjct: 71  TNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMI 130

Query: 126 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 185
           LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG
Sbjct: 131 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 190

Query: 186 KYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDE 245
           KYTGITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDE
Sbjct: 191 KYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSCVKILVFDE 250

Query: 246 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK 305
           ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Sbjct: 251 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV-KDYNQLFVKK 310

Query: 306 EELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 357
           EELSLESVKQYKLICPDELTKIR+IKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG
Sbjct: 311 EELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 370

[Close]
BLAST of Cla009093 vs. NCBI nr
Match: gi|659126304|ref|XP_008463114.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo])

HSP 1 Score: 617.5 bits (1591), Expect = 1.5e-173
Identity = 326/374 (87.17%), Postives = 340/374 (90.91%), Query Frame = 1 

Query: 5   ATSDESTTAT-VTVGSSSAPPV-----PKRAWGDEDDD-----------VGEHLESLTI- 64
           +TSD S  A  VT  SSSAPPV     PKRAWGDE+DD             E+LESL I 
Sbjct: 9   STSDVSAAAAAVTADSSSAPPVVTTPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQ 68

Query: 65  ---NLEEPVDSDIS-VTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLP 124
              NLEEP+DS+I+ VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEM+FHKPSKIQAI+LP
Sbjct: 69  DETNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLP 128

Query: 125 MILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKK 184
           MILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKK
Sbjct: 129 MILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKK 188

Query: 185 MGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVF 244
           MGKYTGITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVF
Sbjct: 189 MGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSCVKILVF 248

Query: 245 DEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFV 304
           DEADHMLGEDGFQDDSLRIMRDIERSS HCQVLLFSATFDENVKNFVSRVV KDYNQLFV
Sbjct: 249 DEADHMLGEDGFQDDSLRIMRDIERSSSHCQVLLFSATFDENVKNFVSRVV-KDYNQLFV 308

Query: 305 KKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVD 357
           KKEELSLESVKQYKLICPDELTKIR+IKDRIFELADKLGQTIIFVRTRNSAGMLHKALVD
Sbjct: 309 KKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVD 368

[Close]
BLAST of Cla009093 vs. NCBI nr
Match: gi|659084206|ref|XP_008442767.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Cucumis melo])

HSP 1 Score: 588.6 bits (1516), Expect = 7.4e-165
Identity = 308/371 (83.02%), Postives = 331/371 (89.22%), Query Frame = 1 

Query: 6   TSDESTTATVTVGSSSAP----PVPKRAWGDEDDD------------VGEHLESLTIN-- 65
           ++  S  AT+T   S+AP    P+PKR+WG+E+DD              E +ESL I   
Sbjct: 12  SNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVMESLKIEDE 71

Query: 66  --LEEPVDSDIS-VTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMI 125
             LEEP+DS+I+ VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEMRFHKPSKIQAI+LPMI
Sbjct: 72  TTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMI 131

Query: 126 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 185
           LTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG
Sbjct: 132 LTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 191

Query: 186 KYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDE 245
           KYTGITSECAVPADSANY+P+SKRPPITAQVVIGTPGTIKKWMS RKLGVS VKILVFDE
Sbjct: 192 KYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLGVSCVKILVFDE 251

Query: 246 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK 305
           ADHMLGEDGFQDDSLRIMRDIERSS HCQVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Sbjct: 252 ADHMLGEDGFQDDSLRIMRDIERSSSHCQVLLFSATFDENVKNFVSRVV-KDYNQLFVKK 311

Query: 306 EELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 356
           EELSLESVKQ+KLICP+E TKIR+IKDRIFELADKLGQTIIFV TRNSAG+LHKALVDLG
Sbjct: 312 EELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVATRNSAGVLHKALVDLG 371

[Close]
BLAST of Cla009093 vs. NCBI nr
Match: gi|778684003|ref|XP_004137993.2| (PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus])

HSP 1 Score: 573.2 bits (1476), Expect = 3.2e-160
Identity = 304/371 (81.94%), Postives = 326/371 (87.87%), Query Frame = 1 

Query: 6   TSDESTTATVTVGSSSAP----PVPKRAWGDEDD-----DVG-------EHLESLTIN-- 65
           T+D    AT+T   ++AP    P+PKR WGDE+      D G       E +ESL I   
Sbjct: 11  TNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVMESLKIEDE 70

Query: 66  --LEEPVDSDIS-VTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMI 125
             LEEP+DS+I+ VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEMRFHKPSKIQAI+LPMI
Sbjct: 71  TTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMI 130

Query: 126 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 185
           LTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG
Sbjct: 131 LTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMG 190

Query: 186 KYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDE 245
           KYTGITSECAVPADSANY+P+SKRPP TAQVVIGTPGTIKKWMS RKLGVS VKILVFDE
Sbjct: 191 KYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSCVKILVFDE 250

Query: 246 ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK 305
           ADHMLGEDGFQD SLRIMRDIERSS H QVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Sbjct: 251 ADHMLGEDGFQDYSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVV-KDYNQLFVKK 310

Query: 306 EELSLESVKQYKLICPDELTKIRLIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLG 356
           EELSLESVKQ+KLICP+E TKIR+IKDRIFELADKLGQTIIFV TR SAG+LHKALVDLG
Sbjct: 311 EELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLHKALVDLG 370

The following BLAST results are available for this feature:
BLAST of Cla009093 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RH38_ARATH2.1e-12262.90DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana GN=RH38 PE=1 SV=2[more]
RH38_ORYSJ1.9e-10763.38DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica GN=Os03g0... [more]
DBP5_KLULA2.8e-5537.85ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS ... [more]
DBP5_ASHGO8.2e-5539.24ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.... [more]
DBP5_LODEL5.3e-5437.92ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus (strain ATCC 11503 ... [more]
BLAST of Cla009093 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR39_CUCSA3.6e-17487.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G308770 PE=4 SV=1[more]
A0A0A0LDT3_CUCSA2.3e-16081.94Uncharacterized protein OS=Cucumis sativus GN=Csa_3G746560 PE=4 SV=1[more]
A0A061ETP8_THECC2.1e-14270.16P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theo... [more]
D6N3H0_GOSHI2.0e-14068.78RNA helicase-like protein OS=Gossypium hirsutum PE=2 SV=1[more]
A0A0D2U2X0_GOSRA2.0e-14068.78Uncharacterized protein OS=Gossypium raimondii GN=B456_009G410800 PE=4 SV=1[more]
BLAST of Cla009093 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778702002|ref|XP_004150128.2|5.1e-17487.10PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus][more]
gi|700195695|gb|KGN50872.1|5.1e-17487.10hypothetical protein Csa_5G308770 [Cucumis sativus][more]
gi|659126304|ref|XP_008463114.1|1.5e-17387.17PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo][more]
gi|659084206|ref|XP_008442767.1|7.4e-16583.02PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Cucumis melo][more]
gi|778684003|ref|XP_004137993.2|3.2e-16081.94PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016973 poly(A)+ mRNA export from nucleus
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009409 response to cold
biological_process GO:0009408 response to heat
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0010494 cytoplasmic stress granule
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008186 RNA-dependent ATPase activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla009093Cla009093.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 95..267
score: 3.5
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 89..295
score: 5.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 103..279
score: 23
IPR014014RNA helicase, DEAD-box type, Q motifPROFILEPS51195Q_MOTIFcoord: 69..98
score:
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 57..279
score: 1.4E-57coord: 280..355
score: 3.
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 292..354
score: 1.21E-6coord: 256..265
score: 1.21E-6coord: 55..274
score: 4.36
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 27..355
score: 7.1E
NoneNo IPR availablePANTHERPTHR24031:SF318DEAD-BOX ATP-DEPENDENT RNA HELICASE 38coord: 27..355
score: 7.1E

Synteny