Cla008986 (gene) Watermelon (97103) v1

NameCla008986
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionU-box domain-containing protein kinase family protein (AHRD V1 ***- F4K964_ARATH)
LocationChr1 : 19255804 .. 19256166 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAACGGTGGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGTAACTTCGCTTTTCTTCTTCTTCCCGCCATTGATGGTATTCAAATTTTGA

mRNA sequence

ATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAACGGTGGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGTAACTTCGCTTTTCTTCTTCTTCCCGCCATTGATGGTATTCAAATTTTGA

Coding sequence (CDS)

ATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAACGGTGGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGTAACTTCGCTTTTCTTCTTCTTCCCGCCATTGATGGTATTCAAATTTTGA

Protein sequence

MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQVTSLFFFFPPLMVFKF
BLAST of Cla008986 vs. Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-18
Identity = 42/81 (51.85%), Postives = 59/81 (72.84%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAI--EKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRK 60
           +LLQ++TAR  +GLAH++E+A+  + G F E+LD    DWPV++A +   + ++CAEMRK
Sbjct: 627 ILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGLRCAEMRK 686

Query: 61  RDRPDLGKVVLPELNRLRTMA 80
           RDRPDLGK +LP L RL+ +A
Sbjct: 687 RDRPDLGKEILPVLERLKEVA 707

BLAST of Cla008986 vs. Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-16
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           ++LQ++TAR P G+  AVE A++KGT  EMLD  V DWP+ +  + A++ +KCAE R RD
Sbjct: 634 IILQLLTARNPSGIVPAVENAVKKGTLTEMLDKSVTDWPLAETEELARIGLKCAEFRCRD 693

Query: 61  RPDLGKVVLPELNRL 76
           RPDL   V+P L RL
Sbjct: 694 RPDLKSEVIPVLKRL 708

BLAST of Cla008986 vs. Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.0e-14
Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAI-EKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKR 60
           ++LQ+ITA+P I + H VE AI +   F  +LD     WP+ D  + A L + C EMR+R
Sbjct: 682 VILQLITAKPAIAITHMVEEAIGDDAEFMAILDKKAGSWPISDTRELAALGLCCTEMRRR 741

Query: 61  DRPDLGKVVLPELNRLRTMAEESMGLRS 88
           DRPDL   ++P L RLR +A+++  L S
Sbjct: 742 DRPDLKDQIIPALERLRKVADKAQNLLS 769

BLAST of Cla008986 vs. Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGT-FAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKR 60
           +LLQ++TA+P I L H VE A++    F ++LD    +WP+E+  + A L++ C E+R +
Sbjct: 673 ILLQLLTAKPAIALTHFVESAMDSNDEFLKILDQKAGNWPIEETRELAALALCCTELRGK 732

Query: 61  DRPDLGKVVLPELNRLRTMAEESMGLRSFNGGST 94
           DRPDL   +LP L  L+ +AE++    SF+G ST
Sbjct: 733 DRPDLKDQILPALENLKKVAEKAR--NSFSGVST 764

BLAST of Cla008986 vs. Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEM---LDPDVKDWPVEDALKFAKLSIKCAEMR 60
           ++LQ++T +  + L + VE A+E     E+   LD    +WP+E+  + A L+++C E+R
Sbjct: 654 IILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEETRQLAALALQCTELR 713

Query: 61  KRDRPDLGKVVLPELNRLRTMAEES 83
            +DRPDL   +LP L  L+ +A+++
Sbjct: 714 SKDRPDLEDQILPVLESLKKVADKA 738

BLAST of Cla008986 vs. TrEMBL
Match: A0A0A0LKE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070290 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.6e-47
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           MLLQIITARPPIGLAHAVERAIEKG FAEMLDP+VKDWPVEDALKFAKLSIKCAEMRKRD
Sbjct: 438 MLLQIITARPPIGLAHAVERAIEKGKFAEMLDPEVKDWPVEDALKFAKLSIKCAEMRKRD 497

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQ 105
           RPDLGKVVLPELNRLRTMAEESMGL SF+  STCSSPYASQTSQ
Sbjct: 498 RPDLGKVVLPELNRLRTMAEESMGLGSFSCSSTCSSPYASQTSQ 541

BLAST of Cla008986 vs. TrEMBL
Match: B9HBB0_POPTR (Kinase family protein OS=Populus trichocarpa GN=POPTR_0006s07810g PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.3e-32
Identity = 75/112 (66.96%), Postives = 88/112 (78.57%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           +LLQIITA+PP+GL H VERAIEKGTFAEMLDP V DWP+E+A+ FAKLS+ CAE+R++D
Sbjct: 559 LLLQIITAKPPMGLTHHVERAIEKGTFAEMLDPAVLDWPIEEAMNFAKLSLCCAELRRKD 618

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQVTSLFFFF 113
           RPDLG V+LPEL RLR +AEE+M      GGST SSPY SQ S V   F  F
Sbjct: 619 RPDLGAVILPELKRLRELAEENMP-SVMPGGSTGSSPYHSQFSSVQVSFTCF 669

BLAST of Cla008986 vs. TrEMBL
Match: A5C5X6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012742 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-31
Identity = 72/105 (68.57%), Postives = 87/105 (82.86%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           MLLQIITA+PP+GL H VERAIEKGTFAE+LDP V DWPVE+ALKFAKL+++CAE+R++D
Sbjct: 693 MLLQIITAKPPMGLTHYVERAIEKGTFAEVLDPAVHDWPVEEALKFAKLALQCAELRRKD 752

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQV 106
           RPDLG VVLPELNRLRT+AEE+M     +  +T +SP  S  S V
Sbjct: 753 RPDLGNVVLPELNRLRTLAEENMSSIMLD-STTVASPRKSNVSIV 796

BLAST of Cla008986 vs. TrEMBL
Match: F6H9Q1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00390 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-31
Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           MLLQIITA+PP+GL H VERAIEKGTFAE+LDP V DWPVE+ALKFAKL+++CAE+R++D
Sbjct: 632 MLLQIITAKPPMGLTHYVERAIEKGTFAEVLDPAVHDWPVEEALKFAKLALQCAELRRKD 691

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTS 104
           RPDLG VVLPELNRLRT+AEE+M     +  +T +SP  S  S
Sbjct: 692 RPDLGNVVLPELNRLRTLAEENMSSIMLD-STTVASPRKSNVS 733

BLAST of Cla008986 vs. TrEMBL
Match: M1B2H8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013683 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.3e-31
Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           MLLQIITARPP+GL H VER+IEKGTFA+MLDP V DWP+E+AL FAKL++KCAE+R++D
Sbjct: 666 MLLQIITARPPMGLTHHVERSIEKGTFADMLDPAVPDWPMEEALTFAKLALKCAELRRKD 725

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQVTS 108
           RPDLG V+LPELNRLR +AEE+M    F       +  +  TSQV S
Sbjct: 726 RPDLGTVILPELNRLRVLAEEAMQPMHFGSSPRSPTSESRSTSQVIS 772

BLAST of Cla008986 vs. NCBI nr
Match: gi|778674083|ref|XP_011650128.1| (PREDICTED: U-box domain-containing protein 52-like [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 8.1e-47
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           MLLQIITARPPIGLAHAVERAIEKG FAEMLDP+VKDWPVEDALKFAKLSIKCAEMRKRD
Sbjct: 710 MLLQIITARPPIGLAHAVERAIEKGKFAEMLDPEVKDWPVEDALKFAKLSIKCAEMRKRD 769

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQ 105
           RPDLGKVVLPELNRLRTMAEESMGL SF+  STCSSPYASQTSQ
Sbjct: 770 RPDLGKVVLPELNRLRTMAEESMGLGSFSCSSTCSSPYASQTSQ 813

BLAST of Cla008986 vs. NCBI nr
Match: gi|700206093|gb|KGN61212.1| (hypothetical protein Csa_2G070290 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 8.1e-47
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           MLLQIITARPPIGLAHAVERAIEKG FAEMLDP+VKDWPVEDALKFAKLSIKCAEMRKRD
Sbjct: 438 MLLQIITARPPIGLAHAVERAIEKGKFAEMLDPEVKDWPVEDALKFAKLSIKCAEMRKRD 497

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQ 105
           RPDLGKVVLPELNRLRTMAEESMGL SF+  STCSSPYASQTSQ
Sbjct: 498 RPDLGKVVLPELNRLRTMAEESMGLGSFSCSSTCSSPYASQTSQ 541

BLAST of Cla008986 vs. NCBI nr
Match: gi|659071496|ref|XP_008460102.1| (PREDICTED: U-box domain-containing protein 35-like [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 9.9e-45
Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           MLLQIITARPPIGLAHAVERAIEKG FAE+LDP+VKDWPVEDALKFAKLSIKCAEMRKRD
Sbjct: 699 MLLQIITARPPIGLAHAVERAIEKGKFAEILDPEVKDWPVEDALKFAKLSIKCAEMRKRD 758

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQ 105
           RPDLGKVVLPELNRLRTMAEESMGL SF   ST SSPYASQTSQ
Sbjct: 759 RPDLGKVVLPELNRLRTMAEESMGLGSFCCSSTSSSPYASQTSQ 802

BLAST of Cla008986 vs. NCBI nr
Match: gi|743815519|ref|XP_011019963.1| (PREDICTED: U-box domain-containing protein 34-like [Populus euphratica])

HSP 1 Score: 149.4 bits (376), Expect = 3.9e-33
Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           +LLQIITA+PP+GL H VERAIEKGTFAEMLDP V DWP+E+A+ FAKLS++CAE+R++D
Sbjct: 534 LLLQIITAKPPMGLTHHVERAIEKGTFAEMLDPAVLDWPIEEAMNFAKLSLRCAELRRKD 593

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQV 106
           RPDLG V+LPELNRLR +AEE+M      GGST SSPY SQ S V
Sbjct: 594 RPDLGAVILPELNRLRELAEENMP-SVMPGGSTGSSPYHSQFSSV 637

BLAST of Cla008986 vs. NCBI nr
Match: gi|224090551|ref|XP_002309024.1| (kinase family protein [Populus trichocarpa])

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-32
Identity = 75/112 (66.96%), Postives = 88/112 (78.57%), Query Frame = 1

Query: 1   MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRD 60
           +LLQIITA+PP+GL H VERAIEKGTFAEMLDP V DWP+E+A+ FAKLS+ CAE+R++D
Sbjct: 559 LLLQIITAKPPMGLTHHVERAIEKGTFAEMLDPAVLDWPIEEAMNFAKLSLCCAELRRKD 618

Query: 61  RPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQVTSLFFFF 113
           RPDLG V+LPEL RLR +AEE+M      GGST SSPY SQ S V   F  F
Sbjct: 619 RPDLGAVILPELKRLRELAEENMP-SVMPGGSTGSSPYHSQFSSVQVSFTCF 669

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PUB51_ARATH4.6e-1851.85U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2[more]
PUB34_ARATH4.3e-1652.00U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=3 SV=1[more]
PUB52_ARATH4.0e-1443.18U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1[more]
PUB35_ARATH2.6e-1341.49U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2[more]
PUB53_ARATH1.8e-0934.12Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=... [more]
Match NameE-valueIdentityDescription
A0A0A0LKE4_CUCSA5.6e-4794.23Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070290 PE=4 SV=1[more]
B9HBB0_POPTR2.3e-3266.96Kinase family protein OS=Populus trichocarpa GN=POPTR_0006s07810g PE=4 SV=1[more]
A5C5X6_VITVI1.9e-3168.57Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012742 PE=4 SV=1[more]
F6H9Q1_VITVI2.5e-3168.93Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00390 PE=4 SV=... [more]
M1B2H8_SOLTU4.3e-3164.49Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013683 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778674083|ref|XP_011650128.1|8.1e-4794.23PREDICTED: U-box domain-containing protein 52-like [Cucumis sativus][more]
gi|700206093|gb|KGN61212.1|8.1e-4794.23hypothetical protein Csa_2G070290 [Cucumis sativus][more]
gi|659071496|ref|XP_008460102.1|9.9e-4592.31PREDICTED: U-box domain-containing protein 35-like [Cucumis melo][more]
gi|743815519|ref|XP_011019963.1|3.9e-3370.48PREDICTED: U-box domain-containing protein 34-like [Populus euphratica][more]
gi|224090551|ref|XP_002309024.1|3.3e-3266.96kinase family protein [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006950 response to stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla008986Cla008986.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR27003FAMILY NOT NAMEDcoord: 1..99
score: 4.0
NoneNo IPR availablePANTHERPTHR27003:SF80ADENINE NUCLEOTIDE ALPHA HYDROLASES-DOMAIN CONTAINING PROTEIN KINASE-RELATEDcoord: 1..99
score: 4.0

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None