Cla008986 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAACGGTGGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGTAACTTCGCTTTTCTTCTTCTTCCCGCCATTGATGGTATTCAAATTTTGA ATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAACGGTGGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGTAACTTCGCTTTTCTTCTTCTTCCCGCCATTGATGGTATTCAAATTTTGA ATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAACGGTGGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGTAACTTCGCTTTTCTTCTTCTTCCCGCCATTGATGGTATTCAAATTTTGA MLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQVTSLFFFFPPLMVFKF
BLAST of Cla008986 vs. Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 4.6e-18 Identity = 42/81 (51.85%), Postives = 59/81 (72.84%), Query Frame = 1
BLAST of Cla008986 vs. Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.3e-16 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 1
BLAST of Cla008986 vs. Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.0e-14 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 1
BLAST of Cla008986 vs. Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 1
BLAST of Cla008986 vs. Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09 Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 1
BLAST of Cla008986 vs. TrEMBL
Match: A0A0A0LKE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070290 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 5.6e-47 Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 1
BLAST of Cla008986 vs. TrEMBL
Match: B9HBB0_POPTR (Kinase family protein OS=Populus trichocarpa GN=POPTR_0006s07810g PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.3e-32 Identity = 75/112 (66.96%), Postives = 88/112 (78.57%), Query Frame = 1
BLAST of Cla008986 vs. TrEMBL
Match: A5C5X6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012742 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.9e-31 Identity = 72/105 (68.57%), Postives = 87/105 (82.86%), Query Frame = 1
BLAST of Cla008986 vs. TrEMBL
Match: F6H9Q1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00390 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.5e-31 Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 1
BLAST of Cla008986 vs. TrEMBL
Match: M1B2H8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013683 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 4.3e-31 Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 1
BLAST of Cla008986 vs. NCBI nr
Match: gi|778674083|ref|XP_011650128.1| (PREDICTED: U-box domain-containing protein 52-like [Cucumis sativus]) HSP 1 Score: 194.9 bits (494), Expect = 8.1e-47 Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 1
BLAST of Cla008986 vs. NCBI nr
Match: gi|700206093|gb|KGN61212.1| (hypothetical protein Csa_2G070290 [Cucumis sativus]) HSP 1 Score: 194.9 bits (494), Expect = 8.1e-47 Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 1
BLAST of Cla008986 vs. NCBI nr
Match: gi|659071496|ref|XP_008460102.1| (PREDICTED: U-box domain-containing protein 35-like [Cucumis melo]) HSP 1 Score: 188.0 bits (476), Expect = 9.9e-45 Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 1
BLAST of Cla008986 vs. NCBI nr
Match: gi|743815519|ref|XP_011019963.1| (PREDICTED: U-box domain-containing protein 34-like [Populus euphratica]) HSP 1 Score: 149.4 bits (376), Expect = 3.9e-33 Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 1
BLAST of Cla008986 vs. NCBI nr
Match: gi|224090551|ref|XP_002309024.1| (kinase family protein [Populus trichocarpa]) HSP 1 Score: 146.4 bits (368), Expect = 3.3e-32 Identity = 75/112 (66.96%), Postives = 88/112 (78.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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