Cla008977 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla008977
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Alpha-2 8-sialyltransferase 8B 1 (AHRD V1 -- B2R9U8_HUMAN); contains Interpro domain(s) IPR001675 Glycosyl transferase, family 29
Location	Chr1 : 19063668 .. 19065719 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCTGTTGCATTTCGCCTTTGTGCTTGCTTTAGCTTCTGGATTTGCCGCTATACTCATCTACATTAACGGTGTCTCTAACCTATGTAAGAGCCTTTATGTTTCTGTTTAATTCATTTTCATTTGCATTCGTTGTATGTGTACGATCATCTACTTGTGCTTGTGTGTATTAATAGATGGGAATTATCAACTTTCCGACGAGGATTTTGAAGCTCTGCAATCTCTTCAGAGCAGTTTCCAGAAGTGTGTGGTGAGTTCTGGAAACCAATTGTTTCAAACATTTGCTAATTGCGAACTGGAAAGAACATATTGATGAAAGTTTTGCCTTGTAGCTATTGTGAGGCATGAGCTTGTGACTGACTTCACATTCTCTGCAGACAAAGAGCTTGAACGGGTTGCTTAAGACCATTTAGTTAATTTTGGATGTTATTTTGTTTTAATGACATAGATGATTGTATGTTTATCTCAGTCCAGTGCAAAGTAGTTTAACATTTTGCTCCTTTAAAACAAAAACTTTAATCTCTTTTGGAGTTGCATGTTAATTGTTCAATGTTGTTGCAGAGTGCGAATGGATTAGGTTTACAAGCTGAAGGTGGTGAAGATTATTGCCTAATTACAATGAGGTTTCCTCAAGATACCATTCCCAAATGGGTAGGTTCTCTTGGTCATTTTGACAGACTGATTATATTTGTTGATTTGACAAATTCTGATTAAGTTGGAGCATTAGATTCTGCTAATGAGTCCTGCCACACTGTGTTCTTATGAACCTAATTTTAGCTAATACACAAACTAGTACTTAGATCTTCGAAATTTACATGTGGACAGAAAGACCCTAAAACTGGCGATCTTGAAGGCTTATCATATGAATTTAATCTCTGCGAAGCTGTGGCTATTTGGGAACAGGTAAACTGCTTCCCATATCTGATAAAAGATTGTATGCATTGATTTTTTAGGAGTAATTGAACGTCACCCATTCTAATTTCTACTTTTATCTCAAAAGATGCACCTTGAAATTAAATGTGGTCTCCTTTTATATTATTCCTCTTATAAATGTTCATAAGCATGTTTATAAGTTAATTATTATTTAATGAGTGGACTGCTTAGGTGCGGAACAGTACTACCATACTGACCAGGGAGTACATTGATGGCTTGCCAAATGGATGGGAGGAGTATGCTTGGCGTAGGATTAACAAGGGAGTACTTCTGTAAGTAGTTACAGTTACAAAAGTTTATCCTTCAAATGATTGATAATATATGGGTTAACACCAATCACCTGCTTCAAATGATTGATAATATATGGGTGAACACCAATCACTTGCTGAACAGTTGTATTCTACTGCAAAAAACAACCTATTTTGAACACACATTTTCTTAATTTTGGACTTCCACCATATTAGGTTTTTAGTTCTATAAACTTCATTTCTAATAATCATAAGGAAAGAACTCCTTCTGTAGCGGTATAGTTTATTGCAAACTGCAAAGTGCACATGAATTCACAAATTACATGTTGGCGTTGCTGTGTTTTGAGCTCCAGAATGAACATCCTTATCAAAAGACCATAGACAGTTTCCCCTAGCCAGGCTCACTGTGACCTTTTTTCCTTTTGCAGTAATCGTTGTGCGAATAGAACTCTGTGCATGGAGAAACTTTCCCTAGTACTTCCTGAAACACCACCATATGTACCAAAACAGTATGGTCGTTGCGCTGTTGTGGGAAATTCTGGAGATCTCTTGAAAACCAAATTTGGGGAGGAGATAGACGGTTTTGATGTTGTTATCAGGGAAAATGGGGCCCCTATCCAGGTTCCGCTTCTTCTAATCATTTTGGATGCTCATTTCCTCTGTTTTCTCGTTTATACCATTTATCATCAACAGGAAATCATTTGTTGGCTAATGTTCTCTCTTAGCTTGAGACCCCTCCTCTTTTGGGGTTCATAGAGAAACACTGGATATTGTCGACCTTCTTTCTTTACTACGTGAACTTCACTGTTCTTCAGGGAGAAGGGATGTTAGTTGTTGGGACCCCAGTTCGTCTGCTAGTTCTCTTGTGA

mRNA sequence

ATGAGGCTGTTGCATTTCGCCTTTGTGCTTGCTTTAGCTTCTGGATTTGCCGCTATACTCATCTACATTAACGGTGTCTCTAACCTATATGGGAATTATCAACTTTCCGACGAGGATTTTGAAGCTCTGCAATCTCTTCAGAGCAGTTTCCAGAAGTGTGTGAGTGCGAATGGATTAGGTTTACAAGCTGAAGGTGGTGAAGATTATTGCCTAATTACAATGAGGTTTCCTCAAGATACCATTCCCAAATGGAAAGACCCTAAAACTGGCGATCTTGAAGGCTTATCATATGAATTTAATCTCTGCGAAGCTGTGGCTATTTGGGAACAGGTGCGGAACAGTACTACCATACTGACCAGGGAGTACATTGATGGCTTGCCAAATGGATGGGAGGAGTATGCTTGGCGTAGGATTAACAAGGGAGTACTTCTTAATCGTTGTGCGAATAGAACTCTGTGCATGGAGAAACTTTCCCTAGTACTTCCTGAAACACCACCATATGTACCAAAACAGTATGGTCGTTGCGCTGTTGTGGGAAATTCTGGAGATCTCTTGAAAACCAAATTTGGGGAGGAGATAGACGGTTTTGATGTTGTTATCAGGGAAAATGGGGCCCCTATCCAGCTTGAGACCCCTCCTCTTTTGGGGTTCATAGAGAAACACTGGATATTGTCGACCTTCTTTCTTTACTACGTGAACTTCACTGTTCTTCAGGGAGAAGGGATGTTAGTTGTTGGGACCCCAGTTCGTCTGCTAGTTCTCTTGTGA

Coding sequence (CDS)

ATGAGGCTGTTGCATTTCGCCTTTGTGCTTGCTTTAGCTTCTGGATTTGCCGCTATACTCATCTACATTAACGGTGTCTCTAACCTATATGGGAATTATCAACTTTCCGACGAGGATTTTGAAGCTCTGCAATCTCTTCAGAGCAGTTTCCAGAAGTGTGTGAGTGCGAATGGATTAGGTTTACAAGCTGAAGGTGGTGAAGATTATTGCCTAATTACAATGAGGTTTCCTCAAGATACCATTCCCAAATGGAAAGACCCTAAAACTGGCGATCTTGAAGGCTTATCATATGAATTTAATCTCTGCGAAGCTGTGGCTATTTGGGAACAGGTGCGGAACAGTACTACCATACTGACCAGGGAGTACATTGATGGCTTGCCAAATGGATGGGAGGAGTATGCTTGGCGTAGGATTAACAAGGGAGTACTTCTTAATCGTTGTGCGAATAGAACTCTGTGCATGGAGAAACTTTCCCTAGTACTTCCTGAAACACCACCATATGTACCAAAACAGTATGGTCGTTGCGCTGTTGTGGGAAATTCTGGAGATCTCTTGAAAACCAAATTTGGGGAGGAGATAGACGGTTTTGATGTTGTTATCAGGGAAAATGGGGCCCCTATCCAGCTTGAGACCCCTCCTCTTTTGGGGTTCATAGAGAAACACTGGATATTGTCGACCTTCTTTCTTTACTACGTGAACTTCACTGTTCTTCAGGGAGAAGGGATGTTAGTTGTTGGGACCCCAGTTCGTCTGCTAGTTCTCTTGTGA

Protein sequence

MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLGLQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTREYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGNSGDLLKTKFGEEIDGFDVVIRENGAPIQLETPPLLGFIEKHWILSTFFLYYVNFTVLQGEGMLVVGTPVRLLVLL

Homology

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BLAST of Cla008977 vs. Swiss-Prot
Match: SIA2_ARATH (Sialyltransferase-like protein 2 OS=Arabidopsis thaliana GN=SIA2 PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-92
Identity = 155/208 (74.52%), Postives = 185/208 (88.94%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           M+LLH  F+LAL +G +A+LIYI GVSNLY + + ++ED EALQSLQ+ FQKCVSANGLG
Sbjct: 1   MKLLHLIFLLALTTGISAVLIYIIGVSNLYESNRFTNEDLEALQSLQNGFQKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           LQA  G DYC +++ FP+DT+PKWKDPK+G+LEGLSYEF+LCEAVA WEQVRNS+TILT+
Sbjct: 61  LQAAMGRDYCKVSINFPKDTVPKWKDPKSGELEGLSYEFDLCEAVATWEQVRNSSTILTK 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYID LPNGWE+YAWRRINKG+ LNRC N++LC+EKLSLVLPETPPY P+Q+GRCAV+GN
Sbjct: 121 EYIDALPNGWEDYAWRRINKGIQLNRCQNKSLCIEKLSLVLPETPPYFPRQFGRCAVIGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKTKFG+EID +D V+RENGAPIQ
Sbjct: 181 SGDLLKTKFGKEIDTYDTVLRENGAPIQ 208

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BLAST of Cla008977 vs. Swiss-Prot
Match: STLP4_ORYSJ (Sialyltransferase-like protein 4 OS=Oryza sativa subsp. japonica GN=STLP4 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.4e-87
Identity = 153/208 (73.56%), Postives = 175/208 (84.13%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           MR+L  A   A+ SG  AIL+Y++G+S+ YG  ++SD D  AL +LQS F KCV ANGLG
Sbjct: 1   MRVLPLALAAAIFSGVTAILVYLSGLSS-YGGARVSDADLAALGALQSGFSKCVDANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           L+A  GEDYC + +++P DT  KWKDPKTG+ EGLS+EFNLCEAVA WEQVRNSTTILT+
Sbjct: 61  LKAIPGEDYCRVVIQYPSDTDSKWKDPKTGEPEGLSFEFNLCEAVASWEQVRNSTTILTK 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYID LPNGWEEYAWRRINKG+ LN+C NRTLCMEKLSLVLPETPPYVP+Q+GRCAVVGN
Sbjct: 121 EYIDALPNGWEEYAWRRINKGIHLNKCQNRTLCMEKLSLVLPETPPYVPRQFGRCAVVGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKTKFG+EID +DVVIRENGAPIQ
Sbjct: 181 SGDLLKTKFGDEIDSYDVVIRENGAPIQ 207

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BLAST of Cla008977 vs. Swiss-Prot
Match: SIA1_ARATH (Sialyltransferase-like protein 1 OS=Arabidopsis thaliana GN=SIA1 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.6e-44
Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = 1


Query: 35  LSDEDFEALQSLQSSFQKCVSANGLGLQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEG 94
           L  ED + L   QSS Q+CV+  GLGL A    D+C + ++FP+ T   W + +    E 
Sbjct: 43  LQPEDIQILSDFQSSVQQCVANRGLGLSAHI-IDHCNLILKFPEGTNSTWYNAQFKVFEA 102

Query: 95  LSYEFNLCEAVAIWEQVRNSTTILTREYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCM 154
           L +++N+CEAV +WEQ RN TT+LTREY+D  P+GW +YA  RI + +  ++C NRTLC 
Sbjct: 103 LEFKYNVCEAVLLWEQYRNMTTVLTREYLDVRPDGWLDYAAMRIAQ-LGADKCYNRTLCE 162

Query: 155 EKLSLVLPETPPYVPKQYGRCAVVGNSGDLLKTKFGEEIDGFDVVIRENGAPI 208
           E L+++LP  PP+ P+Q+ +CAVVGNSGDLLKT+FGEEID  D V R+N AP+
Sbjct: 163 EHLNVILPAKPPFHPRQFHKCAVVGNSGDLLKTEFGEEIDSHDAVFRDNEAPV 213

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BLAST of Cla008977 vs. Swiss-Prot
Match: STLP5_ORYSJ (Sialyltransferase-like protein 5 OS=Oryza sativa subsp. japonica GN=STLP5 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-43
Identity = 91/212 (42.92%), Postives = 128/212 (60.38%), Query Frame = 1


Query: 9   VLALASGFAAILIYING----VSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLGLQAE 68
           +L LA  F   ++ I         L     L  ++  AL   QS  Q+CV+  GLGL A+
Sbjct: 23  LLGLALAFCLAVLSIQSSFFTAPRLASRLDLDSDEVRALSGFQSRVQQCVARRGLGLTAD 82

Query: 69  GGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTREYID 128
              D+C + +RFP+ T   W + +    E L Y +++CE + +WEQ RN TT+LTREY+D
Sbjct: 83  I-IDHCKLVLRFPKGTNSTWYNTQFKYFEPLEYNYDVCETILLWEQYRNMTTVLTREYLD 142

Query: 129 GLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGNSGDL 188
             P+GW +YA +RI + +  ++C NRTLC E LS++LP  PP+ P+Q+  CAVVGNSGDL
Sbjct: 143 VRPDGWLDYAAKRIAQ-LGADKCYNRTLCEELLSVLLPAKPPFHPRQFATCAVVGNSGDL 202

Query: 189 LKTKFGEEIDGFDVVIRENGAPIQLETPPLLG 217
           LKT+FG+EID  D V R+N AP+  +    +G
Sbjct: 203 LKTEFGQEIDAHDAVFRDNEAPVNKKYAKYVG 232

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BLAST of Cla008977 vs. Swiss-Prot
Match: SIA8B_PANTR (Alpha-2,8-sialyltransferase 8B OS=Pan troglodytes GN=ST8SIA2 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.9e-06
Identity = 27/54 (50.00%), Postives = 32/54 (59.26%), Query Frame = 1


Query: 155 EKLSLVLPETPPYVPKQYGRCAVVGNSGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           + L  +LP T P   K +G CA+VGNSG LL +  G+EID    VIR N AP+Q
Sbjct: 137 QNLYELLPRTSPLKNKHFGTCAIVGNSGVLLNSGCGQEIDAHSFVIRCNLAPVQ 190

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BLAST of Cla008977 vs. TrEMBL
Match: A0A0A0LYP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196240 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 6.7e-114
Identity = 199/208 (95.67%), Postives = 205/208 (98.56%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           M+LLHFAF+LALASGF AILIYINGVSNLYGNYQLSDEDFEALQSLQ +FQKCVSANGLG
Sbjct: 1   MKLLHFAFLLALASGFTAILIYINGVSNLYGNYQLSDEDFEALQSLQGNFQKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           LQAEGG+DYCL+TMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR
Sbjct: 61  LQAEGGDDYCLVTMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYIDGLPNGWEEYAWRRINKGVLLNRC N+TLCMEKLSLVLPETPPYVPKQYGRCAVVGN
Sbjct: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCVNKTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKTKFGEEIDGFDVVIRENGAPIQ
Sbjct: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 208

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BLAST of Cla008977 vs. TrEMBL
Match: A0A067DZL4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013792mg PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95
Identity = 167/208 (80.29%), Postives = 193/208 (92.79%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           MRLL FAF+LALASGFAAILIYI GVSNLY N ++SDED+EAL+SLQ++F+KCVSANGLG
Sbjct: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYN-RISDEDYEALESLQNAFRKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           L+A  GEDYC + + FP+DT+PKW+DP TG+LE LS++FNLCEAVA WE+VRNSTTILT+
Sbjct: 61  LEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTK 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYID LPNGWEEYAWRRINKGVLLNRC N+TLCMEKLSLVLPETPPY P+Q+GRCAV+GN
Sbjct: 121 EYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKT+FG+EIDG+DVVIRENGAPIQ
Sbjct: 181 SGDLLKTRFGKEIDGYDVVIRENGAPIQ 207

[Close]

BLAST of Cla008977 vs. TrEMBL
Match: A0A067DR55_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013792mg PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95
Identity = 167/208 (80.29%), Postives = 193/208 (92.79%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           MRLL FAF+LALASGFAAILIYI GVSNLY N ++SDED+EAL+SLQ++F+KCVSANGLG
Sbjct: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYN-RISDEDYEALESLQNAFRKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           L+A  GEDYC + + FP+DT+PKW+DP TG+LE LS++FNLCEAVA WE+VRNSTTILT+
Sbjct: 61  LEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTK 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYID LPNGWEEYAWRRINKGVLLNRC N+TLCMEKLSLVLPETPPY P+Q+GRCAV+GN
Sbjct: 121 EYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKT+FG+EIDG+DVVIRENGAPIQ
Sbjct: 181 SGDLLKTRFGKEIDGYDVVIRENGAPIQ 207

[Close]

BLAST of Cla008977 vs. TrEMBL
Match: A0A067DYG2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013792mg PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95
Identity = 167/208 (80.29%), Postives = 193/208 (92.79%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           MRLL FAF+LALASGFAAILIYI GVSNLY N ++SDED+EAL+SLQ++F+KCVSANGLG
Sbjct: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYN-RISDEDYEALESLQNAFRKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           L+A  GEDYC + + FP+DT+PKW+DP TG+LE LS++FNLCEAVA WE+VRNSTTILT+
Sbjct: 61  LEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTK 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYID LPNGWEEYAWRRINKGVLLNRC N+TLCMEKLSLVLPETPPY P+Q+GRCAV+GN
Sbjct: 121 EYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKT+FG+EIDG+DVVIRENGAPIQ
Sbjct: 181 SGDLLKTRFGKEIDGYDVVIRENGAPIQ 207

[Close]

BLAST of Cla008977 vs. TrEMBL
Match: V4TF25_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031575mg PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95
Identity = 167/208 (80.29%), Postives = 193/208 (92.79%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           MRLL FAF+LALASGFAAILIYI GVSNLY N ++SDED+EAL+SLQ++F+KCVSANGLG
Sbjct: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYN-RISDEDYEALESLQNAFRKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           L+A  GEDYC + + FP+DT+PKW+DP TG+LE LS++FNLCEAVA WE+VRNSTTILT+
Sbjct: 61  LEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTK 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYID LPNGWEEYAWRRINKGVLLNRC N+TLCMEKLSLVLPETPPY P+Q+GRCAV+GN
Sbjct: 121 EYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKT+FG+EIDG+DVVIRENGAPIQ
Sbjct: 181 SGDLLKTRFGKEIDGYDVVIRENGAPIQ 207

[Close]

BLAST of Cla008977 vs. NCBI nr
Match: gi|449465419|ref|XP_004150425.1| (PREDICTED: uncharacterized protein LOC101221492 isoform X1 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 9.6e-114
Identity = 199/208 (95.67%), Postives = 205/208 (98.56%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           M+LLHFAF+LALASGF AILIYINGVSNLYGNYQLSDEDFEALQSLQ +FQKCVSANGLG
Sbjct: 1   MKLLHFAFLLALASGFTAILIYINGVSNLYGNYQLSDEDFEALQSLQGNFQKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           LQAEGG+DYCL+TMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR
Sbjct: 61  LQAEGGDDYCLVTMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYIDGLPNGWEEYAWRRINKGVLLNRC N+TLCMEKLSLVLPETPPYVPKQYGRCAVVGN
Sbjct: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCVNKTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKTKFGEEIDGFDVVIRENGAPIQ
Sbjct: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 208

[Close]

BLAST of Cla008977 vs. NCBI nr
Match: gi|778659855|ref|XP_011655188.1| (PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 9.6e-114
Identity = 199/208 (95.67%), Postives = 205/208 (98.56%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           M+LLHFAF+LALASGF AILIYINGVSNLYGNYQLSDEDFEALQSLQ +FQKCVSANGLG
Sbjct: 1   MKLLHFAFLLALASGFTAILIYINGVSNLYGNYQLSDEDFEALQSLQGNFQKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           LQAEGG+DYCL+TMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR
Sbjct: 61  LQAEGGDDYCLVTMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYIDGLPNGWEEYAWRRINKGVLLNRC N+TLCMEKLSLVLPETPPYVPKQYGRCAVVGN
Sbjct: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCVNKTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKTKFGEEIDGFDVVIRENGAPIQ
Sbjct: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 208

[Close]

BLAST of Cla008977 vs. NCBI nr
Match: gi|659118147|ref|XP_008458971.1| (PREDICTED: uncharacterized protein LOC103498225 isoform X1 [Cucumis melo])

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-112
Identity = 196/208 (94.23%), Postives = 205/208 (98.56%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           M+LLHFAF+LALASGF AILIYINGVSNLYGNYQLSDEDFEALQSLQ +FQKCVSANGLG
Sbjct: 1   MKLLHFAFLLALASGFTAILIYINGVSNLYGNYQLSDEDFEALQSLQGNFQKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           LQAEGG+DYCL+TM+FPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR
Sbjct: 61  LQAEGGDDYCLVTMKFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYIDGLPNGWEEYAWRRINKGVLLNRC N+TLCM+KLSLVLPETPPYVPKQYGRCAVVGN
Sbjct: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCVNKTLCMQKLSLVLPETPPYVPKQYGRCAVVGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKT+FGEEIDGFDVVIRENGAPIQ
Sbjct: 181 SGDLLKTRFGEEIDGFDVVIRENGAPIQ 208

[Close]

BLAST of Cla008977 vs. NCBI nr
Match: gi|659118153|ref|XP_008458974.1| (PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2 isoform X4 [Cucumis melo])

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-112
Identity = 196/208 (94.23%), Postives = 205/208 (98.56%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           M+LLHFAF+LALASGF AILIYINGVSNLYGNYQLSDEDFEALQSLQ +FQKCVSANGLG
Sbjct: 1   MKLLHFAFLLALASGFTAILIYINGVSNLYGNYQLSDEDFEALQSLQGNFQKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           LQAEGG+DYCL+TM+FPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR
Sbjct: 61  LQAEGGDDYCLVTMKFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYIDGLPNGWEEYAWRRINKGVLLNRC N+TLCM+KLSLVLPETPPYVPKQYGRCAVVGN
Sbjct: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCVNKTLCMQKLSLVLPETPPYVPKQYGRCAVVGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKT+FGEEIDGFDVVIRENGAPIQ
Sbjct: 181 SGDLLKTRFGEEIDGFDVVIRENGAPIQ 208

[Close]

BLAST of Cla008977 vs. NCBI nr
Match: gi|641824741|gb|KDO44056.1| (hypothetical protein CISIN_1g013792mg [Citrus sinensis])

HSP 1 Score: 357.8 bits (917), Expect = 1.5e-95
Identity = 167/208 (80.29%), Postives = 193/208 (92.79%), Query Frame = 1


Query: 1   MRLLHFAFVLALASGFAAILIYINGVSNLYGNYQLSDEDFEALQSLQSSFQKCVSANGLG 60
           MRLL FAF+LALASGFAAILIYI GVSNLY N ++SDED+EAL+SLQ++F+KCVSANGLG
Sbjct: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYN-RISDEDYEALESLQNAFRKCVSANGLG 60

Query: 61  LQAEGGEDYCLITMRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTR 120
           L+A  GEDYC + + FP+DT+PKW+DP TG+LE LS++FNLCEAVA WE+VRNSTTILT+
Sbjct: 61  LEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTK 120

Query: 121 EYIDGLPNGWEEYAWRRINKGVLLNRCANRTLCMEKLSLVLPETPPYVPKQYGRCAVVGN 180
           EYID LPNGWEEYAWRRINKGVLLNRC N+TLCMEKLSLVLPETPPY P+Q+GRCAV+GN
Sbjct: 121 EYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGN 180

Query: 181 SGDLLKTKFGEEIDGFDVVIRENGAPIQ 209
           SGDLLKT+FG+EIDG+DVVIRENGAPIQ
Sbjct: 181 SGDLLKTRFGKEIDGYDVVIRENGAPIQ 207

The following BLAST results are available for this feature:

BLAST of Cla008977 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SIA2_ARATH	1.6e-92	74.52	Sialyltransferase-like protein 2 OS=Arabidopsis thaliana GN=SIA2 PE=2 SV=1	[more]
STLP4_ORYSJ	3.4e-87	73.56	Sialyltransferase-like protein 4 OS=Oryza sativa subsp. japonica GN=STLP4 PE=2 S...	[more]
SIA1_ARATH	3.6e-44	50.29	Sialyltransferase-like protein 1 OS=Arabidopsis thaliana GN=SIA1 PE=2 SV=1	[more]
STLP5_ORYSJ	2.3e-43	42.92	Sialyltransferase-like protein 5 OS=Oryza sativa subsp. japonica GN=STLP5 PE=2 S...	[more]
SIA8B_PANTR	3.9e-06	50.00	Alpha-2,8-sialyltransferase 8B OS=Pan troglodytes GN=ST8SIA2 PE=2 SV=1	[more]

BLAST of Cla008977 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYP2_CUCSA	6.7e-114	95.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196240 PE=3 SV=1	[more]
A0A067DZL4_CITSI	1.1e-95	80.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013792mg PE=3 SV=1	[more]
A0A067DR55_CITSI	1.1e-95	80.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013792mg PE=3 SV=1	[more]
A0A067DYG2_CITSI	1.1e-95	80.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013792mg PE=3 SV=1	[more]
V4TF25_9ROSI	1.1e-95	80.29	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031575mg PE=3 SV=1	[more]

BLAST of Cla008977 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465419\|ref\|XP_004150425.1\|	9.6e-114	95.67	PREDICTED: uncharacterized protein LOC101221492 isoform X1 [Cucumis sativus]	[more]
gi\|778659855\|ref\|XP_011655188.1\|	9.6e-114	95.67	PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferas...	[more]
gi\|659118147\|ref\|XP_008458971.1\|	1.1e-112	94.23	PREDICTED: uncharacterized protein LOC103498225 isoform X1 [Cucumis melo]	[more]
gi\|659118153\|ref\|XP_008458974.1\|	1.1e-112	94.23	PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferas...	[more]
gi\|641824741\|gb\|KDO44056.1\|	1.5e-95	80.29	hypothetical protein CISIN_1g013792mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001675	Glyco_trans_29

Vocabulary: **Biological Process**
Term	Definition
GO:0006486	protein glycosylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0008373	sialyltransferase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0001574	ganglioside biosynthetic process
biological_process	GO:0001575	globoside metabolic process
biological_process	GO:0018146	keratan sulfate biosynthetic process
biological_process	GO:0016266	O-glycan processing
biological_process	GO:0097503	sialylation
biological_process	GO:0009311	oligosaccharide metabolic process
biological_process	GO:0018279	protein N-linked glycosylation via asparagine
biological_process	GO:0009846	pollen germination
biological_process	GO:0009860	pollen tube growth
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005768	endosome
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003836	beta-galactoside (CMP) alpha-2,3-sialyltransferase activity
molecular_function	GO:0008373	sialyltransferase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla008977	Cla008977.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001675	Glycosyl transferase family 29	PFAM	PF00777	Glyco_transf_29	coord: 153..208 score: 6.7
None	No IPR available	PANTHER	PTHR13713	SIALYLTRANSFERASE	coord: 1..208 score: 6.5E
None	No IPR available	PANTHER	PTHR13713:SF37	CMP-N-ACETYLNEURAMINATE-BETA-1,4-GALACTOSIDE ALPHA-2,3-SIALYLTRANSFERASE	coord: 1..208 score: 6.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla008977	Cla97C01G010090	Watermelon (97103) v2	wmwmbB239
Cla008977	Csa1G196240	Cucumber (Chinese Long) v2	cuwmB051
Cla008977	MELO3C021701	Melon (DHL92) v3.5.1	mewmB170
Cla008977	ClCG01G009990	Watermelon (Charleston Gray)	wcgwmB146
Cla008977	CSPI01G16200	Wild cucumber (PI 183967)	cpiwmB054
Cla008977	CmaCh13G004060	Cucurbita maxima (Rimu)	cmawmB205
Cla008977	CmoCh13G004300	Cucurbita moschata (Rifu)	cmowmB192
Cla008977	Lsi02G010900	Bottle gourd (USVL1VR-Ls)	lsiwmB201
Cla008977	Cp4.1LG20g06380	Cucurbita pepo (Zucchini)	cpewmB517
Cla008977	CsGy1G015800	Cucumber (Gy14) v2	cgybwmB051
Cla008977	MELO3C021701.2	Melon (DHL92) v3.6.1	medwmB166
Cla008977	Carg25134	Silver-seed gourd	carwmB1040
Cla008977	CsaV3_1G018440	Cucumber (Chinese Long) v3	cucwmB057
Cla008977	Bhi08G000672	Wax gourd	wgowmB501

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None