Cla008471 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla008471
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7MHD4_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Location	Chr1 : 8902841 .. 8906130 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCAGCAAGAGTTTGGATTAAACCCACCTCCAATTTTCGACCATCCTTCACAACAACAAAAGTAAGTTATCTCTCTCTCTCTCTCGTTTTTGCTGCTGCCGGTTATGTTTATTTTCCTACAAGAAACAAGATATGCAGCTTATTTTGTTTCATTTATAACATTTGGAACTCTGGGCGCAGTGCATTGATTTGATTGGTAAAACCAATAATTTAGTTCGAGTCAATGGTGTTGGTGCCACAAATTCTCATCCATTTGGTGAGAATTCACTCCATATGGAACAAGGTAAATCAAAGAGCATTCAGTTGATGAATTTCATGGAAGGACGTGGGATTCGTGCCAACTATCAGACCTATCTTTGGCTGTTAGAAGGGTGCTTGACTTCTGGGTCCTTGCTTGAAACTATGAGGCTCCACTGCAGGATTTTGAAATCGGGTTTTGATGTAGAACCTTTACTAATCGATAGTCTTGTTGATAATTATTTTCGACATGGCGATTTAAATGTGGCAGTCAAGGTATTTGACGATAATCCCAACAGAAGTGTATTCTCTTGGAATAAAATGATTCATGTCTCTGTTGCGCAGAAGTTAAATTTCCAGGTGTTTGGTCTCTTCCGACGAATGTTAACAGAAGAAATTACTCCCAACGAATACACTTTTGCTGGGGTTTTAAAGGCTTGTGTTGGTTGCGACATTGCGTTCAACTATGTAGAACAGGTACATTCTAGGACAATATATTATGGTTTTGATAGTAGACCACTTGTTGCTAATCTTTTGATTGATTTGTATTCAAAGAATGGGTACATTGAGTCAGCTAAAAAAGTATTCAATTGCATATATATGAAGGATATTGTTACTTGGGTAGCTATGATCTCAGGTTTATCTCAAAATGGACTTGAAGAAGAGGCTATTCTCCTTTTCTGTGATATGCATGCATCAGAAATCTTTCCTACTCCTTATGTACTGTCAAGTGTGTTAAGTGCTTCAACCAAGAAACAATTATTTGAATTGGGAGAGCAGCTTCACTGTCTAGTTATTAAGTGGGGATTTCATTCTGAAACATACGTGTGTAATGCTCTTGTGGCATTGTACTCCCGTTCCGGGAAATTGGTATCTGCCGAGCGGATATTTAGCGCAATGAAATATAGGGATGGGGTTTCGTATAATTCACTAATATCTGGCTTAGTTCAGCAAGGATTTAGTGACAGGGCATTAGAATTGTTTACCAAAATGCAACAAGATTGCTTTAAACCAGATTGTATTACGGTTGCTAGTCTGTTGAGTGCTTGTGCATCGGTTGGGGCTCTTCACAAGGGAATGCAATTACACTCATATGCGATAAAAGCTGGAATGTCTGCAGATATTATTCTTGAAGGTTCTCTTCTTGATCTTTATTCGAAGTGTGCTGATGTAGAGACTGCCCATAAATTTTTCCTTACTACAGAGACAGAAAATATAGTGTTGTGGAATGTGATGCTAGTTGCTTATGGACAATTGGATAATCTGAGTGATTCATTTGAAATGTTTAGACAGATGCAAATTGAGGGCATGATACCCAATCAGTTCACCTACCCAAGTATTTTGAGAACTTGTACTTCTTTGGGAGCCTTGTATTTAGGAGAGCAAATTCATACCCATGTTATAAAGACTGGGTTTCAGTTGAATGTCTATGTGTGTAGTGTGCTTATAGATCTGTATGCTAAGCATGAACAATTAGACCTTGCTCTTAGAATCCTACGACGGCTGCCAGAGGACGATGTTGTCTCCTGGACAGCTATGATTGCTGGTTATGTGCAACATGATAGGTTTTCTGAAGCACTTCGACTTTTTGAAGAAATGGAATATCGAGGAATTCTATCTGACAATATTGGATTTTCCAGTGCTATTAGTGCATGTGCAGGTACTCGGGCACTCCGTCAAGGCCAACAAATTCATGCTCAGTCATATGTGTCTGGATTTGGAGACGATCTTTCAATCAACAATGCTCTAATTAGTCTATATGCCAGATGCGGTAGAATTCAGGAAGCATATTTAGCATTTGAAAAAATTGACGATAAAAATAATATTTCTTGGAATTCATTGGTTTCAGGATTTGCGCAGAGTGGATATTTTGAAGAAGCATTGCAGGTATTTGTTCGAATGTTAAGGACTGAAGCAGAAGTTAATATGTTCACATATGGTTCGGCAATTAGTGCTGCAGCCAGTCTTGCAAACATTAAGCAAGGGCAACAAATTCATGCCATGGTTTTGAAAACCGGATACGATTCTGAAATAGAAGCTTCTAATTCTTTAATCACATTGTATGCAAAATGTGGTAGCATAAGTGATGCCTGGAGAGAATTCAATGATATGCCAGAAAAGAATGTGATTTCTTGGAATGCCATGATTACTGGCTATTCCCAGCATGGTTGTGGTATGGAATCACTTCGTCTTTTTGAAGAGATGAAGGTGTATGGGATCATGCCAAACCATGTTACTTTTGTAGGAGTCTTGTCGGCGTGTAGCCATATCGGTCTTGTAAAAGAAGGTCTTGATTACTTCAAATCCATGTATAAAATGCATGATTTGGTTCCTAAATCCGAACATTATGTGTGTGTAGTGGATCTCCTTGGTCGGGCTGGTCTGTTGGACCGTGCAATGGAATTCATAGAAGAAATGCCTATCCCTGCAGATGCGATGATATGGAGAACGCTTTTAAGTGCTTGTGTTATTCACAAGAATATGGAAATAGGAGAGCGTGCTGCACATCATCTCTTAGAATTGGAACCTGAAGACTCAGCAACCTATGTGCTACTATCAAACATATATGCTGTTTCTAGAAAATGGGTTCACAGGGATTGGTCGAGGAAATTGATGAAAGACAGGGGGGTGAAGAAAGAGCCTGGTCGTAGTTGGATTGAAGTTAAGAATGCGGTTCATGCATTCTATGCTGGGGATAAGCTCCATCCACTTGCAAATCAGATATACGAGCATATAGGACATTTAAATAGACGAACATCTGAAATTGGATATGTACAAGATAGTTTTAGCCTTTTGAATGAGTCAGAGCAAGGCCAGAAGGATCCAACAATGCATGTTCATAGTGAGAAATTAGCAATTGCTTTTGGACTACTGAGCTTGAGTAATAATATTCCCATACGAGTAATGAAGAATCTCCGTGTCTGTAATGATTGCCACAATTGGATAAAATACGTATCGAAGATTTCAAACCGCTCTATTATAGTGAGGGATGCACATCGTTTTCATCATTTCAATGGTGGTATCTGCTCATGTAAAGATTTCTGGTGA

mRNA sequence

ATGGCCGCAGCAAGAGTTTGGATTAAACCCACCTCCAATTTTCGACCATCCTTCACAACAACAAAATGCATTGATTTGATTGGTAAAACCAATAATTTAGTTCGAGTCAATGGTGTTGGTGCCACAAATTCTCATCCATTTGGTGAGAATTCACTCCATATGGAACAAGGTAAATCAAAGAGCATTCAGTTGATGAATTTCATGGAAGGACGTGGGATTCGTGCCAACTATCAGACCTATCTTTGGCTGTTAGAAGGGTGCTTGACTTCTGGGTCCTTGCTTGAAACTATGAGGCTCCACTGCAGGATTTTGAAATCGGGTTTTGATGTAGAACCTTTACTAATCGATAGTCTTGTTGATAATTATTTTCGACATGGCGATTTAAATGTGGCAGTCAAGGTATTTGACGATAATCCCAACAGAAGTGTATTCTCTTGGAATAAAATGATTCATGTCTCTGTTGCGCAGAAGTTAAATTTCCAGGTGTTTGGTCTCTTCCGACGAATGTTAACAGAAGAAATTACTCCCAACGAATACACTTTTGCTGGGGTTTTAAAGGCTTGTGTTGGTTGCGACATTGCGTTCAACTATGTAGAACAGGTACATTCTAGGACAATATATTATGGTTTTGATAGTAGACCACTTGTTGCTAATCTTTTGATTGATTTGTATTCAAAGAATGGGTACATTGAGTCAGCTAAAAAAGTATTCAATTGCATATATATGAAGGATATTGTTACTTGGGTAGCTATGATCTCAGGTTTATCTCAAAATGGACTTGAAGAAGAGGCTATTCTCCTTTTCTGTGATATGCATGCATCAGAAATCTTTCCTACTCCTTATGTACTGTCAAGTGTGTTAAGTGCTTCAACCAAGAAACAATTATTTGAATTGGGAGAGCAGCTTCACTGTCTAGTTATTAAGTGGGGATTTCATTCTGAAACATACGTGTGTAATGCTCTTGTGGCATTGTACTCCCGTTCCGGGAAATTGGTATCTGCCGAGCGGATATTTAGCGCAATGAAATATAGGGATGGGGTTTCGTATAATTCACTAATATCTGGCTTAGTTCAGCAAGGATTTAGTGACAGGGCATTAGAATTGTTTACCAAAATGCAACAAGATTGCTTTAAACCAGATTGTATTACGGTTGCTAGTCTGTTGAGTGCTTGTGCATCGGTTGGGGCTCTTCACAAGGGAATGCAATTACACTCATATGCGATAAAAGCTGGAATGTCTGCAGATATTATTCTTGAAGGTTCTCTTCTTGATCTTTATTCGAAGTGTGCTGATGTAGAGACTGCCCATAAATTTTTCCTTACTACAGAGACAGAAAATATAGTGTTGTGGAATGTGATGCTAGTTGCTTATGGACAATTGGATAATCTGAGTGATTCATTTGAAATGTTTAGACAGATGCAAATTGAGGGCATGATACCCAATCAGTTCACCTACCCAAGTATTTTGAGAACTTGTACTTCTTTGGGAGCCTTGTATTTAGGAGAGCAAATTCATACCCATGTTATAAAGACTGGGTTTCAGTTGAATGTCTATGTGTGTAGTGTGCTTATAGATCTGTATGCTAAGCATGAACAATTAGACCTTGCTCTTAGAATCCTACGACGGCTGCCAGAGGACGATGTTGTCTCCTGGACAGCTATGATTGCTGGTTATGTGCAACATGATAGGTTTTCTGAAGCACTTCGACTTTTTGAAGAAATGGAATATCGAGGAATTCTATCTGACAATATTGGATTTTCCAGTGCTATTAGTGCATGTGCAGGTACTCGGGCACTCCGTCAAGGCCAACAAATTCATGCTCAGTCATATGTGTCTGGATTTGGAGACGATCTTTCAATCAACAATGCTCTAATTAGTCTATATGCCAGATGCGGTAGAATTCAGGAAGCATATTTAGCATTTGAAAAAATTGACGATAAAAATAATATTTCTTGGAATTCATTGGTTTCAGGATTTGCGCAGAGTGGATATTTTGAAGAAGCATTGCAGGTATTTGTTCGAATGTTAAGGACTGAAGCAGAAGTTAATATGTTCACATATGGTTCGGCAATTAGTGCTGCAGCCAGTCTTGCAAACATTAAGCAAGGGCAACAAATTCATGCCATGGTTTTGAAAACCGGATACGATTCTGAAATAGAAGCTTCTAATTCTTTAATCACATTGTATGCAAAATGTGGTAGCATAAGTGATGCCTGGAGAGAATTCAATGATATGCCAGAAAAGAATGTGATTTCTTGGAATGCCATGATTACTGGCTATTCCCAGCATGGTTGTGGTATGGAATCACTTCGTCTTTTTGAAGAGATGAAGGTGTATGGGATCATGCCAAACCATGTTACTTTTGTAGGAGTCTTGTCGGCGTGTAGCCATATCGGTCTTGTAAAAGAAGGTCTTGATTACTTCAAATCCATGTATAAAATGCATGATTTGGTTCCTAAATCCGAACATTATGTGTGTGTAGTGGATCTCCTTGGTCGGGCTGGTCTGTTGGACCGTGCAATGGAATTCATAGAAGAAATGCCTATCCCTGCAGATGCGATGATATGGAGAACGCTTTTAAGTGCTTGTGTTATTCACAAGAATATGGAAATAGGAGAGCGTGCTGCACATCATCTCTTAGAATTGGAACCTGAAGACTCAGCAACCTATGTGCTACTATCAAACATATATGCTGTTTCTAGAAAATGGGTTCACAGGGATTGGTCGAGGAAATTGATGAAAGACAGGGGGGTGAAGAAAGAGCCTGGTCGTAGTTGGATTGAAGTTAAGAATGCGGTTCATGCATTCTATGCTGGGGATAAGCTCCATCCACTTGCAAATCAGATATACGAGCATATAGGACATTTAAATAGACGAACATCTGAAATTGGATATGTACAAGATAGTTTTAGCCTTTTGAATGAGTCAGAGCAAGGCCAGAAGGATCCAACAATGCATGTTCATAGTGAGAAATTAGCAATTGCTTTTGGACTACTGAGCTTGAGTAATAATATTCCCATACGAGTAATGAAGAATCTCCGTGTCTGTAATGATTGCCACAATTGGATAAAATACGTATCGAAGATTTCAAACCGCTCTATTATAGTGAGGGATGCACATCGTTTTCATCATTTCAATGGTGGTATCTGCTCATGTAAAGATTTCTGGTGA

Coding sequence (CDS)

ATGGCCGCAGCAAGAGTTTGGATTAAACCCACCTCCAATTTTCGACCATCCTTCACAACAACAAAATGCATTGATTTGATTGGTAAAACCAATAATTTAGTTCGAGTCAATGGTGTTGGTGCCACAAATTCTCATCCATTTGGTGAGAATTCACTCCATATGGAACAAGGTAAATCAAAGAGCATTCAGTTGATGAATTTCATGGAAGGACGTGGGATTCGTGCCAACTATCAGACCTATCTTTGGCTGTTAGAAGGGTGCTTGACTTCTGGGTCCTTGCTTGAAACTATGAGGCTCCACTGCAGGATTTTGAAATCGGGTTTTGATGTAGAACCTTTACTAATCGATAGTCTTGTTGATAATTATTTTCGACATGGCGATTTAAATGTGGCAGTCAAGGTATTTGACGATAATCCCAACAGAAGTGTATTCTCTTGGAATAAAATGATTCATGTCTCTGTTGCGCAGAAGTTAAATTTCCAGGTGTTTGGTCTCTTCCGACGAATGTTAACAGAAGAAATTACTCCCAACGAATACACTTTTGCTGGGGTTTTAAAGGCTTGTGTTGGTTGCGACATTGCGTTCAACTATGTAGAACAGGTACATTCTAGGACAATATATTATGGTTTTGATAGTAGACCACTTGTTGCTAATCTTTTGATTGATTTGTATTCAAAGAATGGGTACATTGAGTCAGCTAAAAAAGTATTCAATTGCATATATATGAAGGATATTGTTACTTGGGTAGCTATGATCTCAGGTTTATCTCAAAATGGACTTGAAGAAGAGGCTATTCTCCTTTTCTGTGATATGCATGCATCAGAAATCTTTCCTACTCCTTATGTACTGTCAAGTGTGTTAAGTGCTTCAACCAAGAAACAATTATTTGAATTGGGAGAGCAGCTTCACTGTCTAGTTATTAAGTGGGGATTTCATTCTGAAACATACGTGTGTAATGCTCTTGTGGCATTGTACTCCCGTTCCGGGAAATTGGTATCTGCCGAGCGGATATTTAGCGCAATGAAATATAGGGATGGGGTTTCGTATAATTCACTAATATCTGGCTTAGTTCAGCAAGGATTTAGTGACAGGGCATTAGAATTGTTTACCAAAATGCAACAAGATTGCTTTAAACCAGATTGTATTACGGTTGCTAGTCTGTTGAGTGCTTGTGCATCGGTTGGGGCTCTTCACAAGGGAATGCAATTACACTCATATGCGATAAAAGCTGGAATGTCTGCAGATATTATTCTTGAAGGTTCTCTTCTTGATCTTTATTCGAAGTGTGCTGATGTAGAGACTGCCCATAAATTTTTCCTTACTACAGAGACAGAAAATATAGTGTTGTGGAATGTGATGCTAGTTGCTTATGGACAATTGGATAATCTGAGTGATTCATTTGAAATGTTTAGACAGATGCAAATTGAGGGCATGATACCCAATCAGTTCACCTACCCAAGTATTTTGAGAACTTGTACTTCTTTGGGAGCCTTGTATTTAGGAGAGCAAATTCATACCCATGTTATAAAGACTGGGTTTCAGTTGAATGTCTATGTGTGTAGTGTGCTTATAGATCTGTATGCTAAGCATGAACAATTAGACCTTGCTCTTAGAATCCTACGACGGCTGCCAGAGGACGATGTTGTCTCCTGGACAGCTATGATTGCTGGTTATGTGCAACATGATAGGTTTTCTGAAGCACTTCGACTTTTTGAAGAAATGGAATATCGAGGAATTCTATCTGACAATATTGGATTTTCCAGTGCTATTAGTGCATGTGCAGGTACTCGGGCACTCCGTCAAGGCCAACAAATTCATGCTCAGTCATATGTGTCTGGATTTGGAGACGATCTTTCAATCAACAATGCTCTAATTAGTCTATATGCCAGATGCGGTAGAATTCAGGAAGCATATTTAGCATTTGAAAAAATTGACGATAAAAATAATATTTCTTGGAATTCATTGGTTTCAGGATTTGCGCAGAGTGGATATTTTGAAGAAGCATTGCAGGTATTTGTTCGAATGTTAAGGACTGAAGCAGAAGTTAATATGTTCACATATGGTTCGGCAATTAGTGCTGCAGCCAGTCTTGCAAACATTAAGCAAGGGCAACAAATTCATGCCATGGTTTTGAAAACCGGATACGATTCTGAAATAGAAGCTTCTAATTCTTTAATCACATTGTATGCAAAATGTGGTAGCATAAGTGATGCCTGGAGAGAATTCAATGATATGCCAGAAAAGAATGTGATTTCTTGGAATGCCATGATTACTGGCTATTCCCAGCATGGTTGTGGTATGGAATCACTTCGTCTTTTTGAAGAGATGAAGGTGTATGGGATCATGCCAAACCATGTTACTTTTGTAGGAGTCTTGTCGGCGTGTAGCCATATCGGTCTTGTAAAAGAAGGTCTTGATTACTTCAAATCCATGTATAAAATGCATGATTTGGTTCCTAAATCCGAACATTATGTGTGTGTAGTGGATCTCCTTGGTCGGGCTGGTCTGTTGGACCGTGCAATGGAATTCATAGAAGAAATGCCTATCCCTGCAGATGCGATGATATGGAGAACGCTTTTAAGTGCTTGTGTTATTCACAAGAATATGGAAATAGGAGAGCGTGCTGCACATCATCTCTTAGAATTGGAACCTGAAGACTCAGCAACCTATGTGCTACTATCAAACATATATGCTGTTTCTAGAAAATGGGTTCACAGGGATTGGTCGAGGAAATTGATGAAAGACAGGGGGGTGAAGAAAGAGCCTGGTCGTAGTTGGATTGAAGTTAAGAATGCGGTTCATGCATTCTATGCTGGGGATAAGCTCCATCCACTTGCAAATCAGATATACGAGCATATAGGACATTTAAATAGACGAACATCTGAAATTGGATATGTACAAGATAGTTTTAGCCTTTTGAATGAGTCAGAGCAAGGCCAGAAGGATCCAACAATGCATGTTCATAGTGAGAAATTAGCAATTGCTTTTGGACTACTGAGCTTGAGTAATAATATTCCCATACGAGTAATGAAGAATCTCCGTGTCTGTAATGATTGCCACAATTGGATAAAATACGTATCGAAGATTTCAAACCGCTCTATTATAGTGAGGGATGCACATCGTTTTCATCATTTCAATGGTGGTATCTGCTCATGTAAAGATTTCTGGTGA

Protein sequence

MAAARVWIKPTSNFRPSFTTTKCIDLIGKTNNLVRVNGVGATNSHPFGENSLHMEQGKSKSIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEKIDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQHGCGMESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFNGGICSCKDFW

Homology

[Close]

BLAST of Cla008471 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 1237.6 bits (3201), Expect = 0.0e+00
Identity = 612/1016 (60.24%), Postives = 777/1016 (76.48%), Query Frame = 1


Query: 42   TNSHPFGENSLHMEQGKSKSIQLMNFMEGRGIRANYQTYLWLLEGCL-TSGSLLETMRLH 101
            T    F   S+++ + +S   + ++ +E RGIR N+QT  WLLEGCL T+GSL E  +LH
Sbjct: 49   TRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLH 108

Query: 102  CRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNF 161
             +ILK G D    L + L D Y   GDL  A KVFD+ P R++F+WNKMI    ++ L  
Sbjct: 109  SQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIG 168

Query: 162  QVFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLL 221
            +VFGLF RM++E +TPNE TF+GVL+AC G  +AF+ VEQ+H+R +Y G     +V N L
Sbjct: 169  EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPL 228

Query: 222  IDLYSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTP 281
            IDLYS+NG+++ A++VF+ + +KD  +WVAMISGLS+N  E EAI LFCDM+   I PTP
Sbjct: 229  IDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288

Query: 282  YVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSA 341
            Y  SSVLSA  K +  E+GEQLH LV+K GF S+TYVCNALV+LY   G L+SAE IFS 
Sbjct: 289  YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348

Query: 342  MKYRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKG 401
            M  RD V+YN+LI+GL Q G+ ++A+ELF +M  D  +PD  T+ASL+ AC++ G L +G
Sbjct: 349  MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408

Query: 402  MQLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQL 461
             QLH+Y  K G +++  +EG+LL+LY+KCAD+ETA  +FL TE EN+VLWNVMLVAYG L
Sbjct: 409  QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468

Query: 462  DNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 521
            D+L +SF +FRQMQIE ++PNQ+TYPSIL+TC  LG L LGEQIH+ +IKT FQLN YVC
Sbjct: 469  DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528

Query: 522  SVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGIL 581
            SVLID+YAK  +LD A  IL R    DVVSWT MIAGY Q++   +AL  F +M  RGI 
Sbjct: 529  SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588

Query: 582  SDNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLA 641
            SD +G ++A+SACAG +AL++GQQIHAQ+ VSGF  DL   NAL++LY+RCG+I+E+YLA
Sbjct: 589  SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648

Query: 642  FEKIDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANI 701
            FE+ +  +NI+WN+LVSGF QSG  EEAL+VFVRM R   + N FT+GSA+ AA+  AN+
Sbjct: 649  FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708

Query: 702  KQGQQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGY 761
            KQG+Q+HA++ KTGYDSE E  N+LI++YAKCGSISDA ++F ++  KN +SWNA+I  Y
Sbjct: 709  KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768

Query: 762  SQHGCGMESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPK 821
            S+HG G E+L  F++M    + PNHVT VGVLSACSHIGLV +G+ YF+SM   + L PK
Sbjct: 769  SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828

Query: 822  SEHYVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLL 881
             EHYVCVVD+L RAGLL RA EFI+EMPI  DA++WRTLLSACV+HKNMEIGE AAHHLL
Sbjct: 829  PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 888

Query: 882  ELEPEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGD 941
            ELEPEDSATYVLLSN+YAVS+KW  RD +R+ MK++GVKKEPG+SWIEVKN++H+FY GD
Sbjct: 889  ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 948

Query: 942  KLHPLANQIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLS 1001
            + HPLA++I+E+   L +R SEIGYVQD FSLLNE +  QKDP + +HSEKLAI+FGLLS
Sbjct: 949  QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008

Query: 1002 LSNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFNGGICSCKDFW 1057
            L   +PI VMKNLRVCNDCH WIK+VSK+SNR IIVRDA+RFHHF GG CSCKD+W
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]

BLAST of Cla008471 vs. Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.0e-181
Identity = 361/974 (37.06%), Postives = 560/974 (57.49%), Query Frame = 1


Query: 100  HCRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLN 159
            H R+ K+  D +  L ++L++ Y   GD   A KVFD+ P R+  SW  ++        +
Sbjct: 24   HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 160  FQVFGLFRRMLTEEITPNEYTFAGVLKAC--VGCDIAFNYVEQVHSRTIYYGFDSRPLVA 219
             +     R M+ E I  N+Y F  VL+AC  +G  +   +  Q+H       +    +V+
Sbjct: 84   KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG-SVGILFGRQIHGLMFKLSYAVDAVVS 143

Query: 220  NLLIDLYSKN-GYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEI 279
            N+LI +Y K  G +  A   F  I +K+ V+W ++IS  SQ G +  A  +F  M     
Sbjct: 144  NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 203

Query: 280  FPTPYVLSSVLSA--STKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSA 339
             PT Y   S+++   S  +    L EQ+ C + K G  ++ +V + LV+ +++SG L  A
Sbjct: 204  RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 263

Query: 340  ERIFSAMKYRDGVSYNSLISGLVQQGFSDRALELFTKMQQ--DCFKPDCITVASLL---S 399
             ++F+ M+ R+ V+ N L+ GLV+Q + + A +LF  M    D      + + S     S
Sbjct: 264  RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 323

Query: 400  ACASVGALHKGMQLHSYAIKAGMSADIILEGS-LLDLYSKCADVETAHKFFLTTETENIV 459
                VG L KG ++H + I  G+   ++  G+ L+++Y+KC  +  A + F     ++ V
Sbjct: 324  LAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 383

Query: 460  LWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV 519
             WN M+    Q     ++ E ++ M+   ++P  FT  S L +C SL    LG+QIH   
Sbjct: 384  SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 443

Query: 520  IKTGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDR-FSEA 579
            +K G  LNV V + L+ LYA+   L+   +I   +PE D VSW ++I    + +R   EA
Sbjct: 444  LKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEA 503

Query: 580  LRLFEEMEYRGILSDNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISL 639
            +  F   +  G   + I FSS +SA +       G+QIH  +  +   D+ +  NALI+ 
Sbjct: 504  VVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIAC 563

Query: 640  YARCGRIQEAYLAFEKIDDK-NNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFT 699
            Y +CG +      F ++ ++ +N++WNS++SG+  +    +AL +   ML+T   ++ F 
Sbjct: 564  YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFM 623

Query: 700  YGSAISAAASLANIKQGQQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMP 759
            Y + +SA AS+A +++G ++HA  ++   +S++   ++L+ +Y+KCG +  A R FN MP
Sbjct: 624  YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 683

Query: 760  EKNVISWNAMITGYSQHGCGMESLRLFEEMKVYG-IMPNHVTFVGVLSACSHIGLVKEGL 819
             +N  SWN+MI+GY++HG G E+L+LFE MK+ G   P+HVTFVGVLSACSH GL++EG 
Sbjct: 684  VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 743

Query: 820  DYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSAC-- 879
             +F+SM   + L P+ EH+ C+ D+LGRAG LD+  +FIE+MP+  + +IWRT+L AC  
Sbjct: 744  KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 803

Query: 880  VIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPG 939
               +  E+G++AA  L +LEPE++  YVLL N+YA   +W     +RK MKD  VKKE G
Sbjct: 804  ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 863

Query: 940  RSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQKDP 999
             SW+ +K+ VH F AGDK HP A+ IY+ +  LNR+  + GYV  +   L + EQ  K+ 
Sbjct: 864  YSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEE 923

Query: 1000 TMHVHSEKLAIAFGLLS-LSNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRF 1057
             +  HSEKLA+AF L +  S+ +PIR+MKNLRVC DCH+  KY+SKI  R II+RD++RF
Sbjct: 924  ILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRF 983

HSP 2 Score: 239.6 bits (610), Expect = 1.6e-61
Identity = 182/641 (28.39%), Postives = 307/641 (47.89%), Query Frame = 1


Query: 22  KCIDLIGKTNNLVRVNGVGATNSHPFGEN-SLHMEQGKSKS-IQLMNFMEGRGIRANYQT 81
           KCI  +G    L     +   NS  +    S++ + G  +S  ++ + M+  G R    T
Sbjct: 151 KCIGSVGYA--LCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYT 210

Query: 82  YLWLLEGC--LTSGSLLETMRLHCRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDD 141
           +  L+     LT   +    ++ C I KSG   +  +   LV  + + G L+ A KVF+ 
Sbjct: 211 FGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 270

Query: 142 NPNRSVFSWNKMIHVSVAQKLNFQVFGLFRRMLTE-EITPNEYTF--AGVLKACVGCDIA 201
              R+  + N ++   V QK   +   LF  M +  +++P  Y    +   +  +  ++ 
Sbjct: 271 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG 330

Query: 202 FNYVEQVHSRTIYYGF-DSRPLVANLLIDLYSKNGYIESAKKVFNCIYMKDIVTWVAMIS 261
                +VH   I  G  D    + N L+++Y+K G I  A++VF  +  KD V+W +MI+
Sbjct: 331 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 390

Query: 262 GLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHS 321
           GL QNG   EA+  +  M   +I P  + L S LS+    +  +LG+Q+H   +K G   
Sbjct: 391 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 450

Query: 322 ETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQGFS-DRALELFTKM 381
              V NAL+ LY+ +G L    +IFS+M   D VS+NS+I  L +   S   A+  F   
Sbjct: 451 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 510

Query: 382 QQDCFKPDCITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADV 441
           Q+   K + IT +S+LSA +S+     G Q+H  A+K  ++ +   E +L+  Y KC ++
Sbjct: 511 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 570

Query: 442 ETAHKFF-LTTETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRT 501
           +   K F    E  + V WN M+  Y   + L+ + ++   M   G   + F Y ++L  
Sbjct: 571 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 630

Query: 502 CTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSW 561
             S+  L  G ++H   ++   + +V V S L+D+Y+K  +LD ALR    +P  +  SW
Sbjct: 631 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 690

Query: 562 TAMIAGYVQHDRFSEALRLFEEMEYRG-ILSDNIGFSSAISACAGTRALRQG-QQIHAQS 621
            +MI+GY +H +  EAL+LFE M+  G    D++ F   +SAC+    L +G +   + S
Sbjct: 691 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 750

Query: 622 YVSGFGDDLSINNALISLYARCGRIQEAYLAFEKIDDKNNI 651
              G    +   + +  +  R G + +     EK+  K N+
Sbjct: 751 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789

[Close]

BLAST of Cla008471 vs. Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 8.4e-172
Identity = 319/830 (38.43%), Postives = 507/830 (61.08%), Query Frame = 1


Query: 232  SAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL--SA 291
            +A  +F+    +D  ++++++ G S++G  +EA  LF ++H   +     + SSVL  SA
Sbjct: 45   NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104

Query: 292  STKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVSY 351
            +   +LF  G QLHC  IK+GF  +  V  +LV  Y +        ++F  MK R+ V++
Sbjct: 105  TLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 164

Query: 352  NSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQLHSYAIK 411
             +LISG  +   +D  L LF +MQ +  +P+  T A+ L   A  G   +G+Q+H+  +K
Sbjct: 165  TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 224

Query: 412  AGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEM 471
             G+   I +  SL++LY KC +V  A   F  TE +++V WN M+  Y       ++  M
Sbjct: 225  NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 284

Query: 472  FRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYAK 531
            F  M++  +  ++ ++ S+++ C +L  L   EQ+H  V+K GF  +  + + L+  Y+K
Sbjct: 285  FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 344

Query: 532  HEQLDLALRILRRLP-EDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDNIGFSS 591
               +  ALR+ + +    +VVSWTAMI+G++Q+D   EA+ LF EM+ +G+  +   +S 
Sbjct: 345  CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 404

Query: 592  AISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEKIDDKN 651
             ++A      +    ++HAQ   + +    ++  AL+  Y + G+++EA   F  IDDK+
Sbjct: 405  ILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 464

Query: 652  NISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISA-AASLANIKQGQQIH 711
             ++W+++++G+AQ+G  E A+++F  + +   + N FT+ S ++  AA+ A++ QG+Q H
Sbjct: 465  IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 524

Query: 712  AMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQHGCGM 771
               +K+  DS +  S++L+T+YAK G+I  A   F    EK+++SWN+MI+GY+QHG  M
Sbjct: 525  GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 584

Query: 772  ESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEHYVCV 831
            ++L +F+EMK   +  + VTF+GV +AC+H GLV+EG  YF  M +   + P  EH  C+
Sbjct: 585  KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 644

Query: 832  VDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELEPEDS 891
            VDL  RAG L++AM+ IE MP PA + IWRT+L+AC +HK  E+G  AA  ++ ++PEDS
Sbjct: 645  VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 704

Query: 892  ATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLAN 951
            A YVLLSN+YA S  W  R   RKLM +R VKKEPG SWIEVKN  ++F AGD+ HPL +
Sbjct: 705  AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 764

Query: 952  QIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSNNIPI 1011
            QIY  +  L+ R  ++GY  D+  +L + +   K+  +  HSE+LAIAFGL++     P+
Sbjct: 765  QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPL 824

Query: 1012 RVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFNG-GICSCKDFW 1057
             ++KNLRVC DCH  IK ++KI  R I+VRD++RFHHF+  G+CSC DFW
Sbjct: 825  LIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868

HSP 2 Score: 279.6 bits (714), Expect = 1.4e-73
Identity = 171/569 (30.05%), Postives = 293/569 (51.49%), Query Frame = 1


Query: 98  RLHCRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQK 157
           +LHC+ +K GF  +  +  SLVD Y +  +     KVFD+   R+V +W  +I       
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173

Query: 158 LNFQVFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVA 217
           +N +V  LF RM  E   PN +TFA  L       +    + QVH+  +  G D    V+
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL-QVHTVVVKNGLDKTIPVS 233

Query: 218 NLLIDLYSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 277
           N LI+LY K G +  A+ +F+   +K +VTW +MISG + NGL+ EA+ +F  M  + + 
Sbjct: 234 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 293

Query: 278 PTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERI 337
            +    +SV+      +     EQLHC V+K+GF  +  +  AL+  YS+   ++ A R+
Sbjct: 294 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 353

Query: 338 FSAMK-YRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGA 397
           F  +    + VS+ ++ISG +Q    + A++LF++M++   +P+  T + +L+A   +  
Sbjct: 354 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 413

Query: 398 LHKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVA 457
                ++H+  +K        +  +LLD Y K   VE A K F   + ++IV W+ ML  
Sbjct: 414 ----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 473

Query: 458 YGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGA-LYLGEQIHTHVIKTGFQL 517
           Y Q      + +MF ++   G+ PN+FT+ SIL  C +  A +  G+Q H   IK+    
Sbjct: 474 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 533

Query: 518 NVYVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEME 577
           ++ V S L+ +YAK   ++ A  + +R  E D+VSW +MI+GY QH +  +AL +F+EM+
Sbjct: 534 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 593

Query: 578 YRGILSDNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSI------NNALISLYA 637
            R +  D + F    +AC     + +G++     Y      D  I      N+ ++ LY+
Sbjct: 594 KRKVKMDGVTFIGVFAACTHAGLVEEGEK-----YFDIMVRDCKIAPTKEHNSCMVDLYS 653

Query: 638 RCGRIQEAYLAFEKI-DDKNNISWNSLVS 658
           R G++++A    E + +   +  W ++++
Sbjct: 654 RAGQLEKAMKVIENMPNPAGSTIWRTILA 672

HSP 3 Score: 126.3 bits (316), Expect = 1.9e-27
Identity = 84/322 (26.09%), Postives = 155/322 (48.14%), Query Frame = 1


Query: 21  TKCIDLIGKTNNLVRVNGVGATNSHPFGENSLHMEQGKSKSIQLMNFMEGRGIRANYQTY 80
           +KC  ++        +  VG   S     +      GK +++ L + M+ +G+R N  TY
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400

Query: 81  LWLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPN 140
             +L    T+  ++    +H +++K+ ++    +  +L+D Y + G +  A KVF    +
Sbjct: 401 SVIL----TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 460

Query: 141 RSVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQ 200
           + + +W+ M+              +F  +    I PNE+TF+ +L  C   + +    +Q
Sbjct: 461 KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ 520

Query: 201 VHSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGL 260
            H   I    DS   V++ L+ +Y+K G IESA++VF     KD+V+W +MISG +Q+G 
Sbjct: 521 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQ 580

Query: 261 EEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNA 320
             +A+ +F +M   ++         V +A T   L E GE+   ++++    + T   N+
Sbjct: 581 AMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS 640

Query: 321 -LVALYSRSGKLVSAERIFSAM 342
            +V LYSR+G+L  A ++   M
Sbjct: 641 CMVDLYSRAGQLEKAMKVIENM 658

[Close]

BLAST of Cla008471 vs. Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.3e-164
Identity = 316/863 (36.62%), Postives = 492/863 (57.01%), Query Frame = 1


Query: 196  NYVEQVHSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCIY-MKDIVTWVAMISG 255
            N + ++H+  I  G DS    +  LID YS      S+  VF  +   K++  W ++I  
Sbjct: 21   NELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRA 80

Query: 256  LSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSE 315
             S+NGL  EA+  +  +  S++ P  Y   SV+ A       E+G+ ++  ++  GF S+
Sbjct: 81   FSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESD 140

Query: 316  TYVCNALVALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQGFSDRALELFTKMQQ 375
             +V NALV +YSR G L  A ++F  M  RD VS+NSLISG    G+ + ALE++ +++ 
Sbjct: 141  LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200

Query: 376  DCFKPDCITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADVET 435
                PD  TV+S+L A  ++  + +G  LH +A+K+G+++ +++   L+ +Y K      
Sbjct: 201  SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260

Query: 436  AHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTS 495
            A + F   +  + V +N M+  Y +L+ + +S  MF +  ++   P+  T  S+LR C  
Sbjct: 261  ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH 320

Query: 496  LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAM 555
            L  L L + I+ +++K GF L   V ++LID+YAK   +  A  +   +   D VSW ++
Sbjct: 321  LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 380

Query: 556  IAGYVQHDRFSEALRLFEEMEYRGILSDNIGFSSAISACAGTRALRQGQQIHAQSYVSGF 615
            I+GY+Q     EA++LF+ M      +D+I +   IS       L+ G+ +H+    SG 
Sbjct: 381  ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 440

Query: 616  GDDLSINNALISLYARCGRIQEAYLAFEKIDDKNNISWNSLVSGFAQSGYFEEALQVFVR 675
              DLS++NALI +YA+CG + ++   F  +   + ++WN+++S   + G F   LQV  +
Sbjct: 441  CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 500

Query: 676  MLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSEIEASNSLITLYAKCGS 735
            M ++E   +M T+   +   ASLA  + G++IH  +L+ GY+SE++  N+LI +Y+KCG 
Sbjct: 501  MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 560

Query: 736  ISDAWREFNDMPEKNVISWNAMITGYSQHGCGMESLRLFEEMKVYGIMPNHVTFVGVLSA 795
            + ++ R F  M  ++V++W  MI  Y  +G G ++L  F +M+  GI+P+ V F+ ++ A
Sbjct: 561  LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 620

Query: 796  CSHIGLVKEGLDYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRAMEFIEEMPIPADAM 855
            CSH GLV EGL  F+ M   + + P  EHY CVVDLL R+  + +A EFI+ MPI  DA 
Sbjct: 621  CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 680

Query: 856  IWRTLLSACVIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVSRKWVHRDWSRKLMK 915
            IW ++L AC    +ME  ER +  ++EL P+D    +L SN YA  RKW      RK +K
Sbjct: 681  IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 740

Query: 916  DRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRTSEIGYVQDSFSL-L 975
            D+ + K PG SWIEV   VH F +GD   P +  IY+ +  L    ++ GY+ D   +  
Sbjct: 741  DKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQ 800

Query: 976  NESEQGQKDPTMHVHSEKLAIAFGLLSLSNNIPIRVMKNLRVCNDCHNWIKYVSKISNRS 1035
            N  E+ +K   +  HSE+LAIAFGLL+     P++VMKNLRVC DCH   K +SKI  R 
Sbjct: 801  NLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGRE 860

Query: 1036 IIVRDAHRFHHFNGGICSCKDFW 1057
            I+VRDA+RFH F  G CSCKD W
Sbjct: 861  ILVRDANRFHLFKDGTCSCKDRW 882

HSP 2 Score: 323.2 bits (827), Expect = 1.1e-86
Identity = 192/663 (28.96%), Postives = 347/663 (52.34%), Query Frame = 1


Query: 89  TSGSLLETMRLHCRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDD-NPNRSVFSWN 148
           +S +L E  R+H  ++  G D        L+D Y    +   ++ VF   +P ++V+ WN
Sbjct: 16  SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75

Query: 149 KMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIY 208
            +I       L  +    + ++   +++P++YTF  V+KAC G   A    + V+ + + 
Sbjct: 76  SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA-EMGDLVYEQILD 135

Query: 209 YGFDSRPLVANLLIDLYSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILL 268
            GF+S   V N L+D+YS+ G +  A++VF+ + ++D+V+W ++ISG S +G  EEA+ +
Sbjct: 136 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 195

Query: 269 FCDMHASEIFPTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSR 328
           + ++  S I P  + +SSVL A     + + G+ LH   +K G +S   V N LVA+Y +
Sbjct: 196 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 255

Query: 329 SGKLVSAERIFSAMKYRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASL 388
             +   A R+F  M  RD VSYN++I G ++    + ++ +F +   D FKPD +TV+S+
Sbjct: 256 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSV 315

Query: 389 LSACASVGALHKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENI 448
           L AC  +  L     +++Y +KAG   +  +   L+D+Y+KC D+ TA   F + E ++ 
Sbjct: 316 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 375

Query: 449 VLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTH 508
           V WN ++  Y Q  +L ++ ++F+ M I     +  TY  ++   T L  L  G+ +H++
Sbjct: 376 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 435

Query: 509 VIKTGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEA 568
            IK+G  +++ V + LID+YAK  ++  +L+I   +   D V+W  +I+  V+   F+  
Sbjct: 436 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 495

Query: 569 LRLFEEMEYRGILSDNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISL 628
           L++  +M    ++ D   F   +  CA   A R G++IH      G+  +L I NALI +
Sbjct: 496 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 555

Query: 629 YARCGRIQEAYLAFEKIDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTY 688
           Y++CG ++ +   FE++  ++ ++W  ++  +   G  E+AL+ F  M ++    +   +
Sbjct: 556 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 615

Query: 689 GSAISAAASLANIKQGQQIHAMVLKTGY--DSEIEASNSLITLYAKCGSISDAWREFNDM 748
            + I A +    + +G       +KT Y  D  IE    ++ L ++   IS A      M
Sbjct: 616 IAIIYACSHSGLVDEGLACFEK-MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 675

HSP 3 Score: 250.0 bits (637), Expect = 1.2e-64
Identity = 174/620 (28.06%), Postives = 324/620 (52.26%), Query Frame = 1


Query: 102 RILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQ 161
           +IL  GF+ +  + ++LVD Y R G L  A +VFD+ P R + SWN +I    +     +
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190

Query: 162 VFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLI 221
              ++  +    I P+ +T + VL A  G  +     + +H   +  G +S  +V N L+
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPA-FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 250

Query: 222 DLYSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPY 281
            +Y K      A++VF+ + ++D V++  MI G  +  + EE++ +F + +  +  P   
Sbjct: 251 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLL 310

Query: 282 VLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAM 341
            +SSVL A    +   L + ++  ++K GF  E+ V N L+ +Y++ G +++A  +F++M
Sbjct: 311 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 370

Query: 342 KYRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGM 401
           + +D VS+NS+ISG +Q G    A++LF  M     + D IT   L+S    +  L  G 
Sbjct: 371 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 430

Query: 402 QLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLD 461
            LHS  IK+G+  D+ +  +L+D+Y+KC +V  + K F +  T + V WN ++ A  +  
Sbjct: 431 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 490

Query: 462 NLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCS 521
           + +   ++  QM+   ++P+  T+   L  C SL A  LG++IH  +++ G++  + + +
Sbjct: 491 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 550

Query: 522 VLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILS 581
            LI++Y+K   L+ + R+  R+   DVV+WT MI  Y  +    +AL  F +ME  GI+ 
Sbjct: 551 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 610

Query: 582 DNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNA-LISLYARCGRIQEAYLA 641
           D++ F + I AC+ +  + +G     +       D +  + A ++ L +R  +I +A   
Sbjct: 611 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 670

Query: 642 FEKIDDKNNIS-WNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 701
            + +  K + S W S++     SG  E A +V  R++    E+N    G +I A+ + A 
Sbjct: 671 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII----ELNPDDPGYSILASNAYAA 730

Query: 702 IKQGQQIHAMVLKTGYDSEI 720
           +++  ++ +++ K+  D  I
Sbjct: 731 LRKWDKV-SLIRKSLKDKHI 743

HSP 4 Score: 106.3 bits (264), Expect = 2.1e-21
Identity = 83/295 (28.14%), Postives = 133/295 (45.08%), Query Frame = 1


Query: 60  KSIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLV 119
           K  ++M  ME +   A++ TYL L+        L     LH   +KSG  ++  + ++L+
Sbjct: 394 KLFKMMMIMEEQ---ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 453

Query: 120 DNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEY 179
           D Y + G++  ++K+F         +WN +I   V          +  +M   E+ P+  
Sbjct: 454 DMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMA 513

Query: 180 TFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNC 239
           TF   L  C     A    +++H   + +G++S   + N LI++YSK G +E++ +VF  
Sbjct: 514 TFLVTLPMCASL-AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 573

Query: 240 IYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELG 299
           +  +D+VTW  MI      G  E+A+  F DM  S I P   V  +++ A +   L +  
Sbjct: 574 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD-- 633

Query: 300 EQLHCLVIKWGFH------SETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVS 349
           E L C   K   H       E Y C  +V L SRS K+  AE    AM  +   S
Sbjct: 634 EGLACFE-KMKTHYKIDPMIEHYAC--VVDLLSRSQKISKAEEFIQAMPIKPDAS 679

[Close]

BLAST of Cla008471 vs. Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 1.9e-163
Identity = 303/787 (38.50%), Postives = 476/787 (60.48%), Query Frame = 1


Query: 284  SSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKY 343
            SS+L +  + + F LG+ +H  +I++    ++ + N+L++LYS+SG    AE +F  M+ 
Sbjct: 66   SSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRR 125

Query: 344  ---RDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKG 403
               RD VS++++++     G    A+++F +  +    P+     +++ AC++   +  G
Sbjct: 126  FGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185

Query: 404  MQLHSYAIKAG-MSADIILEGSLLDLYSKCAD-VETAHKFFLTTETENIVLWNVMLVAYG 463
                 + +K G   +D+ +  SL+D++ K  +  E A+K F      N+V W +M+    
Sbjct: 186  RVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCM 245

Query: 464  QLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVY 523
            Q+    ++   F  M + G   ++FT  S+   C  L  L LG+Q+H+  I++G   +V 
Sbjct: 246  QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE 305

Query: 524  VCSVLIDLYAKHE---QLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFS-EALRLFEEM 583
             CS L+D+YAK      +D   ++  R+ +  V+SWTA+I GY+++   + EA+ LF EM
Sbjct: 306  -CS-LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 365

Query: 584  EYRGILSDN-IGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGR 643
              +G +  N   FSSA  AC      R G+Q+  Q++  G   + S+ N++IS++ +  R
Sbjct: 366  ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 425

Query: 644  IQEAYLAFEKIDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISA 703
            +++A  AFE + +KN +S+N+ + G  ++  FE+A ++   +   E  V+ FT+ S +S 
Sbjct: 426  MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 485

Query: 704  AASLANIKQGQQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMPEKNVISW 763
             A++ +I++G+QIH+ V+K G        N+LI++Y+KCGSI  A R FN M  +NVISW
Sbjct: 486  VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 545

Query: 764  NAMITGYSQHGCGMESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYK 823
             +MITG+++HG  +  L  F +M   G+ PN VT+V +LSACSH+GLV EG  +F SMY+
Sbjct: 546  TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 605

Query: 824  MHDLVPKSEHYVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSACVIHKNMEIGE 883
             H + PK EHY C+VDLL RAGLL  A EFI  MP  AD ++WRT L AC +H N E+G+
Sbjct: 606  DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 665

Query: 884  RAAHHLLELEPEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAV 943
             AA  +LEL+P + A Y+ LSNIYA + KW      R+ MK+R + KE G SWIEV + +
Sbjct: 666  LAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKI 725

Query: 944  HAFYAGDKLHPLANQIYEHIGHLNRRTSEIGYVQDSFSLLN----ESEQGQKDPTMHVHS 1003
            H FY GD  HP A+QIY+ +  L       GYV D+  +L+    E+++ +K+  ++ HS
Sbjct: 726  HKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHS 785

Query: 1004 EKLAIAFGLLSLSNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFNGGI 1057
            EK+A+AFGL+S S + P+RV KNLRVC DCHN +KY+S +S R I++RD +RFHHF  G 
Sbjct: 786  EKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGK 845

HSP 2 Score: 270.0 bits (689), Expect = 1.1e-70
Identity = 172/608 (28.29%), Postives = 315/608 (51.81%), Query Frame = 1


Query: 169 MLTEEITP-NEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDLYSKN 228
           M  + I P +  TF+ +LK+C+     F   + VH+R I +  +   ++ N LI LYSK+
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRAR-DFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 111

Query: 229 GYIESAKKVFNCIYM---KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLS 288
           G    A+ VF  +     +D+V+W AM++    NG E +AI +F +     + P  Y  +
Sbjct: 112 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 171

Query: 289 SVLSASTKKQLFELGEQLHCLVIKWG-FHSETYVCNALVALYSRS-GKLVSAERIFSAMK 348
           +V+ A +      +G      ++K G F S+  V  +L+ ++ +      +A ++F  M 
Sbjct: 172 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 231

Query: 349 YRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQ 408
             + V++  +I+  +Q GF   A+  F  M    F+ D  T++S+ SACA +  L  G Q
Sbjct: 232 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 291

Query: 409 LHSYAIKAGMSADIILEGSLLDLYSKCA---DVETAHKFFLTTETENIVLWNVMLVAYGQ 468
           LHS+AI++G+  D+  E SL+D+Y+KC+    V+   K F   E  +++ W  ++  Y +
Sbjct: 292 LHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 351

Query: 469 LDNLS-DSFEMFRQMQIEGMI-PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV 528
             NL+ ++  +F +M  +G + PN FT+ S  + C +L    +G+Q+     K G   N 
Sbjct: 352 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 411

Query: 529 YVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYR 588
            V + +I ++ K ++++ A R    L E ++VS+   + G  ++  F +A +L  E+  R
Sbjct: 412 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 471

Query: 589 GILSDNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEA 648
            +      F+S +S  A   ++R+G+QIH+Q    G   +  + NALIS+Y++CG I  A
Sbjct: 472 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 531

Query: 649 YLAFEKIDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASL 708
              F  ++++N ISW S+++GFA+ G+    L+ F +M+    + N  TY + +SA + +
Sbjct: 532 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 591

Query: 709 ANIKQG-QQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMP-EKNVISWNA 764
             + +G +  ++M        ++E    ++ L  + G ++DA+   N MP + +V+ W  
Sbjct: 592 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 651

HSP 3 Score: 216.9 bits (551), Expect = 1.1e-54
Identity = 161/602 (26.74%), Postives = 290/602 (48.17%), Query Frame = 1


Query: 53  HMEQGKSK-SIQLMNFMEGRGIRA-NYQTYLWLLEGCLTSGSLLETMRLHCRILKSGFDV 112
           H+  G  + ++  ++ M   GIR  +  T+  LL+ C+ +        +H R+++  FD+
Sbjct: 36  HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIE--FDI 95

Query: 113 EP--LLIDSLVDNYFRHGDLNVAVKVFDDNPN---RSVFSWNKMIHVSVAQKLNFQVFGL 172
           EP  +L +SL+  Y + GD   A  VF+       R V SW+ M+              +
Sbjct: 96  EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 155

Query: 173 FRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYG--FDSRPLVANLLIDL 232
           F   L   + PN+Y +  V++AC   D  F  V +V    +     F+S   V   LID+
Sbjct: 156 FVEFLELGLVPNDYCYTAVIRACSNSD--FVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 215

Query: 233 YSKN-GYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYV 292
           + K     E+A KVF+ +   ++VTW  MI+   Q G   EAI  F DM  S      + 
Sbjct: 216 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 275

Query: 293 LSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSR---SGKLVSAERIFS 352
           LSSV SA  + +   LG+QLH   I+ G   +     +LV +Y++    G +    ++F 
Sbjct: 276 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFD 335

Query: 353 AMKYRDGVSYNSLISGLVQQ-GFSDRALELFTKM-QQDCFKPDCITVASLLSACASVGAL 412
            M+    +S+ +LI+G ++    +  A+ LF++M  Q   +P+  T +S   AC ++   
Sbjct: 336 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 395

Query: 413 HKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAY 472
             G Q+   A K G++++  +  S++ ++ K   +E A + F +   +N+V +N  L   
Sbjct: 396 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 455

Query: 473 GQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV 532
            +  N   +F++  ++    +  + FT+ S+L    ++G++  GEQIH+ V+K G   N 
Sbjct: 456 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 515

Query: 533 YVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYR 592
            VC+ LI +Y+K   +D A R+   +   +V+SWT+MI G+ +H      L  F +M   
Sbjct: 516 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 575

Query: 593 GILSDNIGFSSAISACAGTRALRQGQQIHAQSYVS-GFGDDLSINNALISLYARCGRIQE 639
           G+  + + + + +SAC+    + +G +     Y        +     ++ L  R G + +
Sbjct: 576 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 631

HSP 4 Score: 179.5 bits (454), Expect = 1.9e-43
Identity = 152/596 (25.50%), Postives = 273/596 (45.81%), Query Frame = 1


Query: 103 ILKSG-FDVEPLLIDSLVDNYFR-HGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNF 162
           ++K+G F+ +  +  SL+D + +       A KVFD     +V +W  MI   +      
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251

Query: 163 QVFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLL 222
           +    F  M+      +++T + V  AC   +   +  +Q+HS  I  G      V   L
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELE-NLSLGKQLHSWAIRSGLVDD--VECSL 311

Query: 223 IDLYSK---NGYIESAKKVFNCIYMKDIVTWVAMISGLSQN-GLEEEAILLFCDMHAS-E 282
           +D+Y+K   +G ++  +KVF+ +    +++W A+I+G  +N  L  EAI LF +M     
Sbjct: 312 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 371

Query: 283 IFPTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAE 342
           + P  +  SS   A        +G+Q+     K G  S + V N++++++ +S ++  A+
Sbjct: 372 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 431

Query: 343 RIFSAMKYRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVG 402
           R F ++  ++ VSYN+ + G  +    ++A +L +++ +        T ASLLS  A+VG
Sbjct: 432 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 491

Query: 403 ALHKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLV 462
           ++ KG Q+HS  +K G+S +  +  +L+ +YSKC  ++TA + F   E  N++ W  M+ 
Sbjct: 492 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 551

Query: 463 AYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGAL-----YLGEQIHTHVIK 522
            + +        E F QM  EG+ PN+ TY +IL  C+ +G +     +       H IK
Sbjct: 552 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 611

Query: 523 TGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLP-EDDVVSWTAMIAGYVQHDRFSEALR 582
              ++  Y C  ++DL  +   L  A   +  +P + DV+ W   +     H        
Sbjct: 612 P--KMEHYAC--MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE---- 671

Query: 583 LFEEMEYRGILSDNIGFSSA------ISACAG--------TRALRQ-------------- 642
              ++  R IL  +    +A      I ACAG         R +++              
Sbjct: 672 -LGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 731

Query: 643 GQQIHAQSYVSGFGDDLSIN--------NALISLYARCGRIQEAYLAFEKIDDKNN 650
           G +IH + YV   GD    N        + LI+   RCG + +  L   K++++N+
Sbjct: 732 GDKIH-KFYV---GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEEND 771

[Close]

BLAST of Cla008471 vs. TrEMBL
Match: A0A0A0KHX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486770 PE=4 SV=1)

HSP 1 Score: 1912.9 bits (4954), Expect = 0.0e+00
Identity = 949/1035 (91.69%), Postives = 984/1035 (95.07%), Query Frame = 1


Query: 22   KCIDLIGKTNNLVRVNGVGATNSHPFGENSLHMEQGKSKSIQLMNFMEGRGIRANYQTYL 81
            KCID I KTNN+VRV+GVGATNSH F + +LHMEQGKSK IQLMNFME RG+R+NYQ YL
Sbjct: 2    KCIDWIDKTNNVVRVSGVGATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYL 61

Query: 82   WLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNR 141
            WLLEGCLTSGSL ETMRLHCRI KSGFD EPLLIDSLVDNYFRHGD + AVKVFD+N NR
Sbjct: 62   WLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNR 121

Query: 142  SVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQV 201
            SVFSWNKMIHV VAQK NFQVF LFRRML E ITPN YTFAGVLKACVG DIAFNYV+QV
Sbjct: 122  SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQV 181

Query: 202  HSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLE 261
            HSRT YYGFDS PLVANLLIDLYSKNGYIESAKKVFNCI MKDIVTWVAMISGLSQNGLE
Sbjct: 182  HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 241

Query: 262  EEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNAL 321
            EEAILLFCDMHASEIFPTPYVLSSVLSASTK QLFELGEQLHCLVIKWGFHSETYVCN L
Sbjct: 242  EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 301

Query: 322  VALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDC 381
            VALYSRS KL+SAERIFS M  RDGVSYNSLISGLVQQGFSDRALELFTKMQ+DC KPDC
Sbjct: 302  VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 361

Query: 382  ITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 441
            ITVASLLSACASVGALHKGMQLHS+AIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT
Sbjct: 362  ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 421

Query: 442  TETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLG 501
            TETENIVLWNVMLVAYGQLDNLSDSFE+FRQMQ+EGMIPNQFTYPSILRTCTSLGALYLG
Sbjct: 422  TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 481

Query: 502  EQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQH 561
            EQIHTHVIKTGFQLNVYVCSVLID+YAK+ QL LALRILRRLPEDDVVSWTAMIAGYVQH
Sbjct: 482  EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 541

Query: 562  DRFSEALRLFEEMEYRGILSDNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSIN 621
            D FSEAL+LFEEMEYRGI  DNIGF+SAISACAG RALRQGQQIHAQSY +GFG DLSIN
Sbjct: 542  DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN 601

Query: 622  NALISLYARCGRIQEAYLAFEKIDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAE 681
            NALISLYARCGRIQEAYLAFEKI DKNNISWNSLVSG AQSGYFEEALQVFVRMLRTEAE
Sbjct: 602  NALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 661

Query: 682  VNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWRE 741
            VNMFTYGSAISAAASLANIKQGQQIH+MVLKTGYDSE E SNSLI+LYAK GSISDAWRE
Sbjct: 662  VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 721

Query: 742  FNDMPEKNVISWNAMITGYSQHGCGMESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLV 801
            FNDM E+NVISWNAMITGYSQHGCGME+LRLFEEMKV GIMPNHVTFVGVLSACSHIGLV
Sbjct: 722  FNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLV 781

Query: 802  KEGLDYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLS 861
            KEGLDYF+SM+K+HDLVPKSEHYVCVVDLLGRAG LDRAME+I+EMPIPADAMIWRTLLS
Sbjct: 782  KEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 841

Query: 862  ACVIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKE 921
            ACVIHKN+EIGERAAHHLLELEPEDSATYVL+SNIYAVSR+W+HRDWSRKLMKDRGVKKE
Sbjct: 842  ACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKE 901

Query: 922  PGRSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQK 981
            PGRSWIEVKNAVHAFYAGDKLHPL NQIYE+IGHLNRRTSEIGYVQDSFSLLNESEQGQK
Sbjct: 902  PGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQK 961

Query: 982  DPTMHVHSEKLAIAFGLLSLSNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHR 1041
            DP  HVHSEKLAIAFGLLSL NNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHR
Sbjct: 962  DPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHR 1021

Query: 1042 FHHFNGGICSCKDFW 1057
            FHHF+GG+CSCKDFW
Sbjct: 1022 FHHFDGGVCSCKDFW 1036

[Close]

BLAST of Cla008471 vs. TrEMBL
Match: F6HLA9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07510 PE=4 SV=1)

HSP 1 Score: 1473.0 bits (3812), Expect = 0.0e+00
Identity = 717/989 (72.50%), Postives = 838/989 (84.73%), Query Frame = 1


Query: 68   MEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLVDNYFRHGD 127
            ME RGIRAN QTYLWL EGC  SGSLL+  +LH RI KSGFD E +L   L+D Y  HG+
Sbjct: 1    MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 128  LNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYTFAGVLKA 187
            ++ A+K+FDD P+ +V  WNK+I   +A+KL  QV GLF  M+TE +TP+E TFA VL+A
Sbjct: 61   VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 188  CVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCIYMKDIVT 247
            C G    F   EQ+H++ I++GF S PLV N LIDLYSKNG+++ AK VF  +++KD V+
Sbjct: 121  CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 248  WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGEQLHCLVI 307
            WVAMISGLSQNG E+EAILLFC MH S + PTPYV SSVLSA TK +LF+LGEQLH  ++
Sbjct: 181  WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 308  KWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQGFSDRALE 367
            KWG  SET+VCNALV LYSR G L++AE+IFS M  RD +SYNSLISGL Q+GFSDRAL+
Sbjct: 241  KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 368  LFTKMQQDCFKPDCITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEGSLLDLYS 427
            LF KMQ DC KPDC+TVASLLSACASVGA +KG QLHSY IK GMS+D+I+EGSLLDLY 
Sbjct: 301  LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360

Query: 428  KCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPS 487
            KC D+ETAH++FLTTETEN+VLWNVMLVAYGQL NLS+S+ +F QMQIEG++PNQ+TYPS
Sbjct: 361  KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420

Query: 488  ILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLPEDD 547
            ILRTCTSLGAL LGEQIHT VIK+GFQ NVYVCSVLID+YAKH +LD A  IL+RL E+D
Sbjct: 421  ILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREED 480

Query: 548  VVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDNIGFSSAISACAGTRALRQGQQIHA 607
            VVSWTAMIAGY QHD F+EAL+LF+EME +GI SDNIGFSSAISACAG +AL QGQQIHA
Sbjct: 481  VVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHA 540

Query: 608  QSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEKIDDKNNISWNSLVSGFAQSGYFEE 667
            QSY+SG+ +DLSI NAL+SLYARCGR Q+AYLAFEKID K+NISWN+L+SGFAQSG+ EE
Sbjct: 541  QSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEE 600

Query: 668  ALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSEIEASNSLIT 727
            ALQVF +M +   E N+FT+GSA+SA A+ ANIKQG+QIHAM++KTGYDSE EASN LIT
Sbjct: 601  ALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLIT 660

Query: 728  LYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQHGCGMESLRLFEEMKVYGIMPNHVT 787
            LY+KCGSI DA REF +MPEKNV+SWNAMITGYSQHG G E++ LFEEMK  G+MPNHVT
Sbjct: 661  LYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVT 720

Query: 788  FVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRAMEFIEEM 847
            FVGVLSACSH+GLV EGL YF+SM K H LVPK EHYVCVVDLLGRA LL  A EFIEEM
Sbjct: 721  FVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEM 780

Query: 848  PIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVSRKWVHRD 907
            PI  DAMIWRTLLSAC +HKN+EIGE AA HLLELEPEDSATYVLLSN+YAVS KW +RD
Sbjct: 781  PIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRD 840

Query: 908  WSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRTSEIGYVQ 967
             +R++MKDRGVKKEPGRSWIEVKN++HAF+ GD+LHPLA QIYE+I  LN R  EIGYVQ
Sbjct: 841  RTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQ 900

Query: 968  DSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSNNIPIRVMKNLRVCNDCHNWIKYVS 1027
            D ++LLN+ EQ QKDPT ++HSEKLA+AFGLLSL+N +PIRV+KNLRVCNDCHNWIK+VS
Sbjct: 901  DRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVS 960

Query: 1028 KISNRSIIVRDAHRFHHFNGGICSCKDFW 1057
            KISNR+I+VRDA+RFHHF GG+CSCKD+W
Sbjct: 961  KISNRAIVVRDAYRFHHFEGGVCSCKDYW 989

[Close]

BLAST of Cla008471 vs. TrEMBL
Match: A0A061F2V6_THECC (Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_026455 PE=4 SV=1)

HSP 1 Score: 1441.4 bits (3730), Expect = 0.0e+00
Identity = 704/1013 (69.50%), Postives = 841/1013 (83.02%), Query Frame = 1


Query: 44   SHPFGENSLHMEQGKSKSIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRI 103
            S+ F E S+   +G SK +  + +ME RG++AN QT+LWLLEGCL SGS+ +  +LH +I
Sbjct: 60   SNSFDELSIEENEGNSKEVSFLYWMENRGVKANQQTFLWLLEGCLNSGSIEQGKKLHGKI 119

Query: 104  LKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVF 163
            LK GF  E +L + L+D +   GDL+ A+ VFDD P R+VFSWNKMI   +++KL  +V 
Sbjct: 120  LKMGFSKEHVLSEKLMDLHIASGDLDAAINVFDDMPKRNVFSWNKMISGFISKKLTNKVL 179

Query: 164  GLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDL 223
              + RM+ E + PNE TFAG+LKAC G ++ F YVEQ+H+R I +GF     V N LIDL
Sbjct: 180  RFYSRMVVENVNPNERTFAGILKACSGSNVWFEYVEQIHARIIRHGFGFSSFVCNPLIDL 239

Query: 224  YSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVL 283
            Y+KNG+I+SA KVF+ +Y+KD V+WVAMISGLSQNG EE+AILLF +MH S I PTPYV 
Sbjct: 240  YTKNGFIDSAIKVFDKLYVKDSVSWVAMISGLSQNGYEEQAILLFSEMHISGICPTPYVF 299

Query: 284  SSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKY 343
            SSVLSA TK + F+LGEQLH LV K GF SETYVCNALV LYSRSG LVSAE+IFS M+ 
Sbjct: 300  SSVLSACTKIEFFKLGEQLHSLVFKQGFSSETYVCNALVTLYSRSGSLVSAEQIFSNMQL 359

Query: 344  RDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQL 403
            RDGV+YNSLISGL Q G+SDRALELF KM  DC KPDC+TVASLL ACAS+GAL+ G QL
Sbjct: 360  RDGVTYNSLISGLAQCGYSDRALELFEKMHHDCLKPDCVTVASLLGACASLGALYTGKQL 419

Query: 404  HSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNL 463
            HSYAIKAG S DII+EGSLLDLY KC+D+ETA++FF TTETEN+VLWNVMLVAYGQLDNL
Sbjct: 420  HSYAIKAGFSMDIIVEGSLLDLYLKCSDIETAYEFFSTTETENVVLWNVMLVAYGQLDNL 479

Query: 464  SDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVL 523
            S+SF +FRQMQIEG++PNQFTYPSILRTCTSLGAL LGEQIH+ VIKTGFQ NVYVCSVL
Sbjct: 480  SESFHIFRQMQIEGLVPNQFTYPSILRTCTSLGALDLGEQIHSQVIKTGFQYNVYVCSVL 539

Query: 524  IDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDN 583
            ID+YAK  +L+ AL ILR+LPE+DVVSWTAMIAGY QHD F EAL LF EM  RGI SDN
Sbjct: 540  IDMYAKLGKLETALEILRKLPEEDVVSWTAMIAGYTQHDMFYEALELFGEMLNRGIQSDN 599

Query: 584  IGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEK 643
            IG SSAISACAG +AL QGQQIHAQS++SGF DDLSI NAL+SLYARC + Q+AY AF+K
Sbjct: 600  IGLSSAISACAGIQALSQGQQIHAQSFLSGFSDDLSIGNALVSLYARCSQRQDAYKAFKK 659

Query: 644  IDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQG 703
            ID+K+NISWN+L+SGF QSG+ EEALQVF +M +   E  ++T  S++SAAA+ ANIKQG
Sbjct: 660  IDNKDNISWNALISGFTQSGFCEEALQVFSQMNKAGLEATLYTCISSVSAAANTANIKQG 719

Query: 704  QQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQH 763
            +QIHAM++K GYD EIEASN LITLYAKCGSI DA +EF ++PEKN +SWNAMITGYSQH
Sbjct: 720  KQIHAMIIKKGYDLEIEASNVLITLYAKCGSIDDAKKEFLEIPEKNEVSWNAMITGYSQH 779

Query: 764  GCGMESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEH 823
            G G+E++ LFE+MK  G+ PN VT VGVLSACSH+GLV EGLDYF SM K H LVPK EH
Sbjct: 780  GYGIEAIDLFEKMKQVGVTPNPVTLVGVLSACSHVGLVDEGLDYFDSMSKEHGLVPKPEH 839

Query: 824  YVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELE 883
            Y CVVDLLGRAGLL RA +F+E+MPI  DA+IWRTLLSAC +HKN++IGE AAHHLL+LE
Sbjct: 840  YACVVDLLGRAGLLCRARKFVEDMPIEPDAIIWRTLLSACAVHKNVDIGEFAAHHLLKLE 899

Query: 884  PEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLH 943
            P+DSA+YVLLSN+YAVS+KW  RD +R++MK+RGVKKEP +SWIEVKN++HAF+ GD+LH
Sbjct: 900  PQDSASYVLLSNLYAVSKKWDSRDQTRQMMKERGVKKEPAQSWIEVKNSIHAFFVGDRLH 959

Query: 944  PLANQIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSN 1003
            PLA +IYEH+  LN+R +EIGYVQD +S  ++ EQGQKDPT+H+HSEKLAIAFGLLSL +
Sbjct: 960  PLAEKIYEHLEDLNKRAAEIGYVQDRYSRFSDVEQGQKDPTVHIHSEKLAIAFGLLSLPS 1019

Query: 1004 NIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFNGGICSCKDFW 1057
             IP+RV+KNLRVCNDCHNWIK+VSKISN+ IIVRDA+RFHHF GG CSC+D+W
Sbjct: 1020 AIPVRVIKNLRVCNDCHNWIKFVSKISNQLIIVRDAYRFHHFEGGSCSCRDYW 1072

[Close]

BLAST of Cla008471 vs. TrEMBL
Match: A0A061F3H7_THECC (Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_026455 PE=4 SV=1)

HSP 1 Score: 1420.6 bits (3676), Expect = 0.0e+00
Identity = 697/1002 (69.56%), Postives = 832/1002 (83.03%), Query Frame = 1


Query: 44   SHPFGENSLHMEQGKSKSIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRI 103
            S+ F E S+   +G SK +  + +ME RG++AN QT+LWLLEGCL SGS+ +  +LH +I
Sbjct: 60   SNSFDELSIEENEGNSKEVSFLYWMENRGVKANQQTFLWLLEGCLNSGSIEQGKKLHGKI 119

Query: 104  LKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVF 163
            LK GF  E +L + L+D +   GDL+ A+ VFDD P R+VFSWNKMI   +++KL  +V 
Sbjct: 120  LKMGFSKEHVLSEKLMDLHIASGDLDAAINVFDDMPKRNVFSWNKMISGFISKKLTNKVL 179

Query: 164  GLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDL 223
              + RM+ E + PNE TFAG+LKAC G ++ F YVEQ+H+R I +GF     V N LIDL
Sbjct: 180  RFYSRMVVENVNPNERTFAGILKACSGSNVWFEYVEQIHARIIRHGFGFSSFVCNPLIDL 239

Query: 224  YSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVL 283
            Y+KNG+I+SA KVF+ +Y+KD V+WVAMISGLSQNG EE+AILLF +MH S I PTPYV 
Sbjct: 240  YTKNGFIDSAIKVFDKLYVKDSVSWVAMISGLSQNGYEEQAILLFSEMHISGICPTPYVF 299

Query: 284  SSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKY 343
            SSVLSA TK + F+LGEQLH LV K GF SETYVCNALV LYSRSG LVSAE+IFS M+ 
Sbjct: 300  SSVLSACTKIEFFKLGEQLHSLVFKQGFSSETYVCNALVTLYSRSGSLVSAEQIFSNMQL 359

Query: 344  RDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQL 403
            RDGV+YNSLISGL Q G+SDRALELF KM  DC KPDC+TVASLL ACAS+GAL+ G QL
Sbjct: 360  RDGVTYNSLISGLAQCGYSDRALELFEKMHHDCLKPDCVTVASLLGACASLGALYTGKQL 419

Query: 404  HSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNL 463
            HSYAIKAG S DII+EGSLLDLY KC+D+ETA++FF TTETEN+VLWNVMLVAYGQLDNL
Sbjct: 420  HSYAIKAGFSMDIIVEGSLLDLYLKCSDIETAYEFFSTTETENVVLWNVMLVAYGQLDNL 479

Query: 464  SDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVL 523
            S+SF +FRQMQIEG++PNQFTYPSILRTCTSLGAL LGEQIH+ VIKTGFQ NVYVCSVL
Sbjct: 480  SESFHIFRQMQIEGLVPNQFTYPSILRTCTSLGALDLGEQIHSQVIKTGFQYNVYVCSVL 539

Query: 524  IDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDN 583
            ID+YAK  +L+ AL ILR+LPE+DVVSWTAMIAGY QHD F EAL LF EM  RGI SDN
Sbjct: 540  IDMYAKLGKLETALEILRKLPEEDVVSWTAMIAGYTQHDMFYEALELFGEMLNRGIQSDN 599

Query: 584  IGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEK 643
            IG SSAISACAG +AL QGQQIHAQS++SGF DDLSI NAL+SLYARC + Q+AY AF+K
Sbjct: 600  IGLSSAISACAGIQALSQGQQIHAQSFLSGFSDDLSIGNALVSLYARCSQRQDAYKAFKK 659

Query: 644  IDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQG 703
            ID+K+NISWN+L+SGF QSG+ EEALQVF +M +   E  ++T  S++SAAA+ ANIKQG
Sbjct: 660  IDNKDNISWNALISGFTQSGFCEEALQVFSQMNKAGLEATLYTCISSVSAAANTANIKQG 719

Query: 704  QQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQH 763
            +QIHAM++K GYD EIEASN LITLYAKCGSI DA +EF ++PEKN +SWNAMITGYSQH
Sbjct: 720  KQIHAMIIKKGYDLEIEASNVLITLYAKCGSIDDAKKEFLEIPEKNEVSWNAMITGYSQH 779

Query: 764  GCGMESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEH 823
            G G+E++ LFE+MK  G+ PN VT VGVLSACSH+GLV EGLDYF SM K H LVPK EH
Sbjct: 780  GYGIEAIDLFEKMKQVGVTPNPVTLVGVLSACSHVGLVDEGLDYFDSMSKEHGLVPKPEH 839

Query: 824  YVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELE 883
            Y CVVDLLGRAGLL RA +F+E+MPI  DA+IWRTLLSAC +HKN++IGE AAHHLL+LE
Sbjct: 840  YACVVDLLGRAGLLCRARKFVEDMPIEPDAIIWRTLLSACAVHKNVDIGEFAAHHLLKLE 899

Query: 884  PEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLH 943
            P+DSA+YVLLSN+YAVS+KW  RD +R++MK+RGVKKEP +SWIEVKN++HAF+ GD+LH
Sbjct: 900  PQDSASYVLLSNLYAVSKKWDSRDQTRQMMKERGVKKEPAQSWIEVKNSIHAFFVGDRLH 959

Query: 944  PLANQIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSN 1003
            PLA +IYEH+  LN+R +EIGYVQD +S  ++ EQGQKDPT+H+HSEKLAIAFGLLSL +
Sbjct: 960  PLAEKIYEHLEDLNKRAAEIGYVQDRYSRFSDVEQGQKDPTVHIHSEKLAIAFGLLSLPS 1019

Query: 1004 NIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHF 1046
             IP+RV+KNLRVCNDCHNWIK+VSKISN+ IIVRDA+RFHHF
Sbjct: 1020 AIPVRVIKNLRVCNDCHNWIKFVSKISNQLIIVRDAYRFHHF 1061

[Close]

BLAST of Cla008471 vs. TrEMBL
Match: A0A0D2SLJ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G288400 PE=4 SV=1)

HSP 1 Score: 1418.7 bits (3671), Expect = 0.0e+00
Identity = 688/1013 (67.92%), Postives = 835/1013 (82.43%), Query Frame = 1


Query: 44   SHPFGENSLHMEQGKSKSIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRI 103
            SH F E S+   +G SK +  +++ME RGI+AN+QT+LWLLEGCL SGS+ E  +LH +I
Sbjct: 70   SHSFDELSIEGNEGNSKEVAFLHWMENRGIKANHQTFLWLLEGCLNSGSIEEGKKLHGKI 129

Query: 104  LKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVF 163
            LK GF  E  L + L+D Y   GDL+ A+KVFDD P R+VFSWNKMI    ++K+N +V 
Sbjct: 130  LKMGFSNEHFLSEKLMDIYIALGDLDGAIKVFDDMPKRNVFSWNKMISGFASKKMNDKVL 189

Query: 164  GLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDL 223
            G + RM+ E + PNE TFA +LKAC G ++ F YVEQ+H+R I  GF     V N LIDL
Sbjct: 190  GFYSRMVAENVNPNESTFASILKACTGSNVWFQYVEQIHARIIRDGFSFSSFVCNPLIDL 249

Query: 224  YSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVL 283
            Y KNG+I+SAKK+F+ +Y+KD V+W+AMISGLSQNG EE+AILLF +MH + I PTPYV 
Sbjct: 250  YMKNGFIDSAKKLFDKLYVKDTVSWLAMISGLSQNGYEEQAILLFSEMHIAGILPTPYVF 309

Query: 284  SSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKY 343
            SSVLSA TK + F+LGEQLH LV K GF SETYVCNALV LYSRSG LVSAE IF     
Sbjct: 310  SSVLSACTKIEFFKLGEQLHSLVFKLGFSSETYVCNALVTLYSRSGNLVSAELIFINTLL 369

Query: 344  RDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQL 403
            RDGV+YNSLISGL Q G+SDRALELF KMQ DC KPDC+TVASLL ACAS+GA   G QL
Sbjct: 370  RDGVTYNSLISGLAQCGYSDRALELFEKMQHDCLKPDCVTVASLLGACASLGASFTGKQL 429

Query: 404  HSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNL 463
            HSYAIKAG S D+I+EGSLLDLY KC+D++TA++FF TTET N+VLWNVMLVAYGQLDNL
Sbjct: 430  HSYAIKAGFSTDLIVEGSLLDLYVKCSDIDTAYEFFSTTETVNVVLWNVMLVAYGQLDNL 489

Query: 464  SDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVL 523
            S+SF +FRQMQIEG++PNQFTYPSILRTCTS+GA  LGEQIH+ VIKTGFQ +VYVCSVL
Sbjct: 490  SESFHIFRQMQIEGLVPNQFTYPSILRTCTSVGAFDLGEQIHSQVIKTGFQYDVYVCSVL 549

Query: 524  IDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDN 583
            ID+YAK  +L+ AL ILRRLPE+DVVSWTAMIAGY QHD F EAL+LF +M  +GI SDN
Sbjct: 550  IDMYAKLGKLETALEILRRLPEEDVVSWTAMIAGYTQHDMFDEALKLFGDMLNQGIQSDN 609

Query: 584  IGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEK 643
            IG SSAISACAG +AL QG+QIHAQS++SGF DD+SI NAL+SLYARCG+  +AY AF+K
Sbjct: 610  IGLSSAISACAGIQALSQGRQIHAQSFLSGFSDDVSIGNALVSLYARCGQRHDAYTAFKK 669

Query: 644  IDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQG 703
            ID K+NISWN+L+SG AQSG+ EEALQVF +M       N++T+ S++SAAA+ AN+KQG
Sbjct: 670  IDKKDNISWNALISGLAQSGFCEEALQVFSQMNAAGVGTNLYTFISSVSAAANTANLKQG 729

Query: 704  QQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQH 763
            +QIHA ++K GYD E E SN+LITLYAKCGSI DA +EF++MPEKN ISWNA+ITGYSQH
Sbjct: 730  KQIHARIIKKGYDLETEVSNALITLYAKCGSIDDAEKEFSEMPEKNEISWNAIITGYSQH 789

Query: 764  GCGMESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEH 823
            G G++++ LFE+M+  G+ PNH+TFVGVLSACSH+GLV EGL YF SM K HDLVPK EH
Sbjct: 790  GSGIKAINLFEKMQQVGVRPNHITFVGVLSACSHVGLVDEGLGYFDSMSKEHDLVPKPEH 849

Query: 824  YVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELE 883
            Y CVVDLL RAGLL RA +FIE+MPI  DA+IWRTLLSAC +HKN++IGE AA+HLL+LE
Sbjct: 850  YNCVVDLLSRAGLLCRARKFIEDMPIEPDAIIWRTLLSACAVHKNVDIGEFAAYHLLKLE 909

Query: 884  PEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLH 943
            P+DSA+YVLLSN+YAVSRKW  RD +R++MK+RGVKKEP +SWIEVK+++HAF+ GD+LH
Sbjct: 910  PQDSASYVLLSNLYAVSRKWDSRDCTRQMMKERGVKKEPAQSWIEVKSSIHAFFVGDRLH 969

Query: 944  PLANQIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSN 1003
            PLA +IYEH+  LN++ ++IGYVQD +SL ++ EQG+KDPT+++HSEKLAIAFGLLSL +
Sbjct: 970  PLAEKIYEHLEDLNQQAAKIGYVQDRYSLFSDVEQGEKDPTVYIHSEKLAIAFGLLSLPS 1029

Query: 1004 NIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFNGGICSCKDFW 1057
             IP+RV+KNLRVC DCHNWIK+VSK+SNR IIVRDA+RFHHF GG CSCKD+W
Sbjct: 1030 AIPVRVIKNLRVCKDCHNWIKFVSKVSNRPIIVRDAYRFHHFEGGSCSCKDYW 1082

[Close]

BLAST of Cla008471 vs. NCBI nr
Match: gi|659080794|ref|XP_008440984.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g13650 isoform X1 [Cucumis melo])

HSP 1 Score: 1979.1 bits (5126), Expect = 0.0e+00
Identity = 980/1056 (92.80%), Postives = 1012/1056 (95.83%), Query Frame = 1


Query: 1    MAAARVWIKPTSNFRPSFTTTKCIDLIGKTNNLVRVNGVGATNSHPFGENSLHMEQGKSK 60
            MAAARVWIKPTSNFRPSFTTTKCID I KTNN+VRV+GVGATNSH F E SLHMEQGKSK
Sbjct: 82   MAAARVWIKPTSNFRPSFTTTKCIDWIDKTNNVVRVSGVGATNSHSFDETSLHMEQGKSK 141

Query: 61   SIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLVD 120
             IQLMNFMEGRGIRANYQTYLWLLEGCLTSGSL ETMRLHCRILKSGFD EPLLIDSLVD
Sbjct: 142  RIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLFETMRLHCRILKSGFDGEPLLIDSLVD 201

Query: 121  NYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYT 180
            NYFRHGD + AVKVFD+N NRSVFSWNK+IHV VAQKLNFQVFGLFRRML E +TPNEYT
Sbjct: 202  NYFRHGDKHEAVKVFDENSNRSVFSWNKIIHVFVAQKLNFQVFGLFRRMLAEGVTPNEYT 261

Query: 181  FAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCI 240
            FAGVLKACVG ++AFNYV+QVHSRTIYYGFDS PLVANLLIDLYSKNGYIESAKKVFNC+
Sbjct: 262  FAGVLKACVGGNVAFNYVKQVHSRTIYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCL 321

Query: 241  YMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGE 300
            YMKDIVTWVAMISGLSQNGLEEEAILLFCDM ASEIFPTPYVLSSVLSASTK QLFELGE
Sbjct: 322  YMKDIVTWVAMISGLSQNGLEEEAILLFCDMRASEIFPTPYVLSSVLSASTKIQLFELGE 381

Query: 301  QLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQG 360
            QLHCLVIKWGFHSETYVCNALVALYSRS KL+SAERIFS M  RDGVSYNSLISGLVQQG
Sbjct: 382  QLHCLVIKWGFHSETYVCNALVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 441

Query: 361  FSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEG 420
            F+DRALELFTKMQ+DCFKPDCITVASLLSACASVGALHKGMQLHS+AIKAGMSADII+EG
Sbjct: 442  FTDRALELFTKMQRDCFKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIVEG 501

Query: 421  SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIP 480
            SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFE+FRQM+IEGMIP
Sbjct: 502  SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMKIEGMIP 561

Query: 481  NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRIL 540
            NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLID+YAKH QL LALRIL
Sbjct: 562  NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKHGQLALALRIL 621

Query: 541  RRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDNIGFSSAISACAGTRALR 600
            RRLPEDDVVSWTAMIAGYVQHD FSEAL+LFEEMEYRGI SDNIGFSSAISACAG RALR
Sbjct: 622  RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQSDNIGFSSAISACAGIRALR 681

Query: 601  QGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEKIDDKNNISWNSLVSGFA 660
            QGQQIHAQSYV GFG DLSINNALISLYARCGRIQEAYLAFEKI DKNNISWNSLVSG A
Sbjct: 682  QGQQIHAQSYVYGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 741

Query: 661  QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSEIE 720
            QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSE E
Sbjct: 742  QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSERE 801

Query: 721  ASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQHGCGMESLRLFEEMKVYG 780
             SNSLITLYAK GSI DAWREFNDM EK+VISWNAMITGYSQHGCGME+LRLFEEMKV G
Sbjct: 802  VSNSLITLYAKSGSIIDAWREFNDMSEKDVISWNAMITGYSQHGCGMEALRLFEEMKVCG 861

Query: 781  IMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRA 840
            IMPNHVTFVGVLSACSHIGLVKEGLDYF+SMYKMHDLVPKSEHYVCVVDLLGRAG LDRA
Sbjct: 862  IMPNHVTFVGVLSACSHIGLVKEGLDYFESMYKMHDLVPKSEHYVCVVDLLGRAGQLDRA 921

Query: 841  MEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVS 900
            +E+IEEMPIPADA IWRTLLSAC+IHKN+EIGERAAHHLLELEPEDSATYVL+SNIYAVS
Sbjct: 922  VEYIEEMPIPADATIWRTLLSACIIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVS 981

Query: 901  RKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRT 960
            RKW+HRDWSRKLMKDRGVKKEPGRSWIEVKN VHAFYAGDKLHPL NQIYE++GHLNRRT
Sbjct: 982  RKWIHRDWSRKLMKDRGVKKEPGRSWIEVKNTVHAFYAGDKLHPLTNQIYEYLGHLNRRT 1041

Query: 961  SEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSNNIPIRVMKNLRVCNDCH 1020
            SEIGYVQDSFSLLNESEQGQKDP MHVHSEKLAIAFGLLSL NNIPIRVMKNLRVCNDCH
Sbjct: 1042 SEIGYVQDSFSLLNESEQGQKDPIMHVHSEKLAIAFGLLSLDNNIPIRVMKNLRVCNDCH 1101

Query: 1021 NWIKYVSKISNRSIIVRDAHRFHHFNGGICSCKDFW 1057
            NWIKYVSKISNR IIVRDAHRFHHF+GG+CSCKDFW
Sbjct: 1102 NWIKYVSKISNRLIIVRDAHRFHHFDGGVCSCKDFW 1137

[Close]

BLAST of Cla008471 vs. NCBI nr
Match: gi|659080796|ref|XP_008440985.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g13650 isoform X2 [Cucumis melo])

HSP 1 Score: 1979.1 bits (5126), Expect = 0.0e+00
Identity = 980/1056 (92.80%), Postives = 1012/1056 (95.83%), Query Frame = 1


Query: 1    MAAARVWIKPTSNFRPSFTTTKCIDLIGKTNNLVRVNGVGATNSHPFGENSLHMEQGKSK 60
            MAAARVWIKPTSNFRPSFTTTKCID I KTNN+VRV+GVGATNSH F E SLHMEQGKSK
Sbjct: 1    MAAARVWIKPTSNFRPSFTTTKCIDWIDKTNNVVRVSGVGATNSHSFDETSLHMEQGKSK 60

Query: 61   SIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLVD 120
             IQLMNFMEGRGIRANYQTYLWLLEGCLTSGSL ETMRLHCRILKSGFD EPLLIDSLVD
Sbjct: 61   RIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLFETMRLHCRILKSGFDGEPLLIDSLVD 120

Query: 121  NYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYT 180
            NYFRHGD + AVKVFD+N NRSVFSWNK+IHV VAQKLNFQVFGLFRRML E +TPNEYT
Sbjct: 121  NYFRHGDKHEAVKVFDENSNRSVFSWNKIIHVFVAQKLNFQVFGLFRRMLAEGVTPNEYT 180

Query: 181  FAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCI 240
            FAGVLKACVG ++AFNYV+QVHSRTIYYGFDS PLVANLLIDLYSKNGYIESAKKVFNC+
Sbjct: 181  FAGVLKACVGGNVAFNYVKQVHSRTIYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCL 240

Query: 241  YMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGE 300
            YMKDIVTWVAMISGLSQNGLEEEAILLFCDM ASEIFPTPYVLSSVLSASTK QLFELGE
Sbjct: 241  YMKDIVTWVAMISGLSQNGLEEEAILLFCDMRASEIFPTPYVLSSVLSASTKIQLFELGE 300

Query: 301  QLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQG 360
            QLHCLVIKWGFHSETYVCNALVALYSRS KL+SAERIFS M  RDGVSYNSLISGLVQQG
Sbjct: 301  QLHCLVIKWGFHSETYVCNALVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 360

Query: 361  FSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEG 420
            F+DRALELFTKMQ+DCFKPDCITVASLLSACASVGALHKGMQLHS+AIKAGMSADII+EG
Sbjct: 361  FTDRALELFTKMQRDCFKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIVEG 420

Query: 421  SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIP 480
            SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFE+FRQM+IEGMIP
Sbjct: 421  SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMKIEGMIP 480

Query: 481  NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRIL 540
            NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLID+YAKH QL LALRIL
Sbjct: 481  NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKHGQLALALRIL 540

Query: 541  RRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDNIGFSSAISACAGTRALR 600
            RRLPEDDVVSWTAMIAGYVQHD FSEAL+LFEEMEYRGI SDNIGFSSAISACAG RALR
Sbjct: 541  RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQSDNIGFSSAISACAGIRALR 600

Query: 601  QGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEKIDDKNNISWNSLVSGFA 660
            QGQQIHAQSYV GFG DLSINNALISLYARCGRIQEAYLAFEKI DKNNISWNSLVSG A
Sbjct: 601  QGQQIHAQSYVYGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 660

Query: 661  QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSEIE 720
            QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSE E
Sbjct: 661  QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSERE 720

Query: 721  ASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQHGCGMESLRLFEEMKVYG 780
             SNSLITLYAK GSI DAWREFNDM EK+VISWNAMITGYSQHGCGME+LRLFEEMKV G
Sbjct: 721  VSNSLITLYAKSGSIIDAWREFNDMSEKDVISWNAMITGYSQHGCGMEALRLFEEMKVCG 780

Query: 781  IMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRA 840
            IMPNHVTFVGVLSACSHIGLVKEGLDYF+SMYKMHDLVPKSEHYVCVVDLLGRAG LDRA
Sbjct: 781  IMPNHVTFVGVLSACSHIGLVKEGLDYFESMYKMHDLVPKSEHYVCVVDLLGRAGQLDRA 840

Query: 841  MEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVS 900
            +E+IEEMPIPADA IWRTLLSAC+IHKN+EIGERAAHHLLELEPEDSATYVL+SNIYAVS
Sbjct: 841  VEYIEEMPIPADATIWRTLLSACIIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVS 900

Query: 901  RKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRT 960
            RKW+HRDWSRKLMKDRGVKKEPGRSWIEVKN VHAFYAGDKLHPL NQIYE++GHLNRRT
Sbjct: 901  RKWIHRDWSRKLMKDRGVKKEPGRSWIEVKNTVHAFYAGDKLHPLTNQIYEYLGHLNRRT 960

Query: 961  SEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSNNIPIRVMKNLRVCNDCH 1020
            SEIGYVQDSFSLLNESEQGQKDP MHVHSEKLAIAFGLLSL NNIPIRVMKNLRVCNDCH
Sbjct: 961  SEIGYVQDSFSLLNESEQGQKDPIMHVHSEKLAIAFGLLSLDNNIPIRVMKNLRVCNDCH 1020

Query: 1021 NWIKYVSKISNRSIIVRDAHRFHHFNGGICSCKDFW 1057
            NWIKYVSKISNR IIVRDAHRFHHF+GG+CSCKDFW
Sbjct: 1021 NWIKYVSKISNRLIIVRDAHRFHHFDGGVCSCKDFW 1056

[Close]

BLAST of Cla008471 vs. NCBI nr
Match: gi|778717946|ref|XP_004142047.2| (PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Cucumis sativus])

HSP 1 Score: 1953.3 bits (5059), Expect = 0.0e+00
Identity = 969/1056 (91.76%), Postives = 1004/1056 (95.08%), Query Frame = 1


Query: 1    MAAARVWIKPTSNFRPSFTTTKCIDLIGKTNNLVRVNGVGATNSHPFGENSLHMEQGKSK 60
            MAAARVWIKPTSNFRPSFTT KCID I KTNN+VRV+GVGATNSH F + +LHMEQGKSK
Sbjct: 1    MAAARVWIKPTSNFRPSFTTMKCIDWIDKTNNVVRVSGVGATNSHSFDQTTLHMEQGKSK 60

Query: 61   SIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLVD 120
             IQLMNFME RG+R+NYQ YLWLLEGCLTSGSL ETMRLHCRI KSGFD EPLLIDSLVD
Sbjct: 61   RIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVD 120

Query: 121  NYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYT 180
            NYFRHGD + AVKVFD+N NRSVFSWNKMIHV VAQK NFQVF LFRRML E ITPN YT
Sbjct: 121  NYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYT 180

Query: 181  FAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCI 240
            FAGVLKACVG DIAFNYV+QVHSRT YYGFDS PLVANLLIDLYSKNGYIESAKKVFNCI
Sbjct: 181  FAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 240

Query: 241  YMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGE 300
             MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTK QLFELGE
Sbjct: 241  CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 300

Query: 301  QLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQG 360
            QLHCLVIKWGFHSETYVCN LVALYSRS KL+SAERIFS M  RDGVSYNSLISGLVQQG
Sbjct: 301  QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 360

Query: 361  FSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEG 420
            FSDRALELFTKMQ+DC KPDCITVASLLSACASVGALHKGMQLHS+AIKAGMSADIILEG
Sbjct: 361  FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 420

Query: 421  SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIP 480
            SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFE+FRQMQ+EGMIP
Sbjct: 421  SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 480

Query: 481  NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRIL 540
            NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLID+YAK+ QL LALRIL
Sbjct: 481  NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 540

Query: 541  RRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDNIGFSSAISACAGTRALR 600
            RRLPEDDVVSWTAMIAGYVQHD FSEAL+LFEEMEYRGI  DNIGF+SAISACAG RALR
Sbjct: 541  RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 600

Query: 601  QGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEKIDDKNNISWNSLVSGFA 660
            QGQQIHAQSY +GFG DLSINNALISLYARCGRIQEAYLAFEKI DKNNISWNSLVSG A
Sbjct: 601  QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 660

Query: 661  QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSEIE 720
            QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIH+MVLKTGYDSE E
Sbjct: 661  QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSERE 720

Query: 721  ASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQHGCGMESLRLFEEMKVYG 780
             SNSLI+LYAK GSISDAWREFNDM E+NVISWNAMITGYSQHGCGME+LRLFEEMKV G
Sbjct: 721  VSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCG 780

Query: 781  IMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRA 840
            IMPNHVTFVGVLSACSHIGLVKEGLDYF+SM+K+HDLVPKSEHYVCVVDLLGRAG LDRA
Sbjct: 781  IMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRA 840

Query: 841  MEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVS 900
            ME+I+EMPIPADAMIWRTLLSACVIHKN+EIGERAAHHLLELEPEDSATYVL+SNIYAVS
Sbjct: 841  MEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVS 900

Query: 901  RKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRT 960
            R+W+HRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPL NQIYE+IGHLNRRT
Sbjct: 901  RQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRT 960

Query: 961  SEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSNNIPIRVMKNLRVCNDCH 1020
            SEIGYVQDSFSLLNESEQGQKDP  HVHSEKLAIAFGLLSL NNIPIRVMKNLRVCNDCH
Sbjct: 961  SEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCH 1020

Query: 1021 NWIKYVSKISNRSIIVRDAHRFHHFNGGICSCKDFW 1057
            NWIKYVSKISNRSIIVRDAHRFHHF+GG+CSCKDFW
Sbjct: 1021 NWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1056

[Close]

BLAST of Cla008471 vs. NCBI nr
Match: gi|700193200|gb|KGN48404.1| (hypothetical protein Csa_6G486770 [Cucumis sativus])

HSP 1 Score: 1912.9 bits (4954), Expect = 0.0e+00
Identity = 949/1035 (91.69%), Postives = 984/1035 (95.07%), Query Frame = 1


Query: 22   KCIDLIGKTNNLVRVNGVGATNSHPFGENSLHMEQGKSKSIQLMNFMEGRGIRANYQTYL 81
            KCID I KTNN+VRV+GVGATNSH F + +LHMEQGKSK IQLMNFME RG+R+NYQ YL
Sbjct: 2    KCIDWIDKTNNVVRVSGVGATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYL 61

Query: 82   WLLEGCLTSGSLLETMRLHCRILKSGFDVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNR 141
            WLLEGCLTSGSL ETMRLHCRI KSGFD EPLLIDSLVDNYFRHGD + AVKVFD+N NR
Sbjct: 62   WLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNR 121

Query: 142  SVFSWNKMIHVSVAQKLNFQVFGLFRRMLTEEITPNEYTFAGVLKACVGCDIAFNYVEQV 201
            SVFSWNKMIHV VAQK NFQVF LFRRML E ITPN YTFAGVLKACVG DIAFNYV+QV
Sbjct: 122  SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQV 181

Query: 202  HSRTIYYGFDSRPLVANLLIDLYSKNGYIESAKKVFNCIYMKDIVTWVAMISGLSQNGLE 261
            HSRT YYGFDS PLVANLLIDLYSKNGYIESAKKVFNCI MKDIVTWVAMISGLSQNGLE
Sbjct: 182  HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 241

Query: 262  EEAILLFCDMHASEIFPTPYVLSSVLSASTKKQLFELGEQLHCLVIKWGFHSETYVCNAL 321
            EEAILLFCDMHASEIFPTPYVLSSVLSASTK QLFELGEQLHCLVIKWGFHSETYVCN L
Sbjct: 242  EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 301

Query: 322  VALYSRSGKLVSAERIFSAMKYRDGVSYNSLISGLVQQGFSDRALELFTKMQQDCFKPDC 381
            VALYSRS KL+SAERIFS M  RDGVSYNSLISGLVQQGFSDRALELFTKMQ+DC KPDC
Sbjct: 302  VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 361

Query: 382  ITVASLLSACASVGALHKGMQLHSYAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 441
            ITVASLLSACASVGALHKGMQLHS+AIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT
Sbjct: 362  ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 421

Query: 442  TETENIVLWNVMLVAYGQLDNLSDSFEMFRQMQIEGMIPNQFTYPSILRTCTSLGALYLG 501
            TETENIVLWNVMLVAYGQLDNLSDSFE+FRQMQ+EGMIPNQFTYPSILRTCTSLGALYLG
Sbjct: 422  TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 481

Query: 502  EQIHTHVIKTGFQLNVYVCSVLIDLYAKHEQLDLALRILRRLPEDDVVSWTAMIAGYVQH 561
            EQIHTHVIKTGFQLNVYVCSVLID+YAK+ QL LALRILRRLPEDDVVSWTAMIAGYVQH
Sbjct: 482  EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 541

Query: 562  DRFSEALRLFEEMEYRGILSDNIGFSSAISACAGTRALRQGQQIHAQSYVSGFGDDLSIN 621
            D FSEAL+LFEEMEYRGI  DNIGF+SAISACAG RALRQGQQIHAQSY +GFG DLSIN
Sbjct: 542  DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN 601

Query: 622  NALISLYARCGRIQEAYLAFEKIDDKNNISWNSLVSGFAQSGYFEEALQVFVRMLRTEAE 681
            NALISLYARCGRIQEAYLAFEKI DKNNISWNSLVSG AQSGYFEEALQVFVRMLRTEAE
Sbjct: 602  NALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 661

Query: 682  VNMFTYGSAISAAASLANIKQGQQIHAMVLKTGYDSEIEASNSLITLYAKCGSISDAWRE 741
            VNMFTYGSAISAAASLANIKQGQQIH+MVLKTGYDSE E SNSLI+LYAK GSISDAWRE
Sbjct: 662  VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 721

Query: 742  FNDMPEKNVISWNAMITGYSQHGCGMESLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLV 801
            FNDM E+NVISWNAMITGYSQHGCGME+LRLFEEMKV GIMPNHVTFVGVLSACSHIGLV
Sbjct: 722  FNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLV 781

Query: 802  KEGLDYFKSMYKMHDLVPKSEHYVCVVDLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLS 861
            KEGLDYF+SM+K+HDLVPKSEHYVCVVDLLGRAG LDRAME+I+EMPIPADAMIWRTLLS
Sbjct: 782  KEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 841

Query: 862  ACVIHKNMEIGERAAHHLLELEPEDSATYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKE 921
            ACVIHKN+EIGERAAHHLLELEPEDSATYVL+SNIYAVSR+W+HRDWSRKLMKDRGVKKE
Sbjct: 842  ACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKE 901

Query: 922  PGRSWIEVKNAVHAFYAGDKLHPLANQIYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQK 981
            PGRSWIEVKNAVHAFYAGDKLHPL NQIYE+IGHLNRRTSEIGYVQDSFSLLNESEQGQK
Sbjct: 902  PGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQK 961

Query: 982  DPTMHVHSEKLAIAFGLLSLSNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHR 1041
            DP  HVHSEKLAIAFGLLSL NNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHR
Sbjct: 962  DPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHR 1021

Query: 1042 FHHFNGGICSCKDFW 1057
            FHHF+GG+CSCKDFW
Sbjct: 1022 FHHFDGGVCSCKDFW 1036

[Close]

BLAST of Cla008471 vs. NCBI nr
Match: gi|731400073|ref|XP_002282164.2| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g13650 [Vitis vinifera])

HSP 1 Score: 1476.8 bits (3822), Expect = 0.0e+00
Identity = 720/1007 (71.50%), Postives = 846/1007 (84.01%), Query Frame = 1


Query: 49   ENSLHMEQGKSKSIQLMNFMEGRGIRANYQTYLWLLEGCLTSGSLLETMRLHCRILKSGF 108
            E+ +   +G  K I  ++ ME RGIRAN QTYLWL EGC  SGSLL+  +LH RI KSGF
Sbjct: 66   ESPVVENEGNGKGIDFLHLMEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGF 125

Query: 109  DVEPLLIDSLVDNYFRHGDLNVAVKVFDDNPNRSVFSWNKMIHVSVAQKLNFQVFGLFRR 168
            D E +L   L+D Y  HG+++ A+K+FDD P+ +V  WNK+I   +A+KL  QV GLF  
Sbjct: 126  DGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSL 185

Query: 169  MLTEEITPNEYTFAGVLKACVGCDIAFNYVEQVHSRTIYYGFDSRPLVANLLIDLYSKNG 228
            M+TE +TP+E TFA VL+AC G    F   EQ+H++ I++GF S PLV N LIDLYSKNG
Sbjct: 186  MITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNG 245

Query: 229  YIESAKKVFNCIYMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 288
            +++ AK VF  +++KD V+WVAMISGLSQNG E+EAILLFC MH S + PTPYV SSVLS
Sbjct: 246  HVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLS 305

Query: 289  ASTKKQLFELGEQLHCLVIKWGFHSETYVCNALVALYSRSGKLVSAERIFSAMKYRDGVS 348
            A TK +LF+LGEQLH  ++KWG  SET+VCNALV LYSR G L++AE+IFS M  RD +S
Sbjct: 306  ACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS 365

Query: 349  YNSLISGLVQQGFSDRALELFTKMQQDCFKPDCITVASLLSACASVGALHKGMQLHSYAI 408
            YNSLISGL Q+GFSDRAL+LF KMQ DC KPDC+TVASLLSACASVGA +KG QLHSY I
Sbjct: 366  YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVI 425

Query: 409  KAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFE 468
            K GMS+D+I+EGSLLDLY KC D+ETAH++FLTTETEN+VLWNVMLVAYGQL NLS+S+ 
Sbjct: 426  KMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYW 485

Query: 469  MFRQMQIEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDLYA 528
            +F QMQIEG++PNQ+TYPSILRTCTSLGAL LGEQIHT VIK+GFQ NVYVCSVLID+YA
Sbjct: 486  IFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYA 545

Query: 529  KHEQLDLALRILRRLPEDDVVSWTAMIAGYVQHDRFSEALRLFEEMEYRGILSDNIGFSS 588
            KH +LD A  IL+RL E+DVVSWTAMIAGY QHD F+EAL+LF+EME +GI SDNIGFSS
Sbjct: 546  KHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSS 605

Query: 589  AISACAGTRALRQGQQIHAQSYVSGFGDDLSINNALISLYARCGRIQEAYLAFEKIDDKN 648
            AISACAG +AL QGQQIHAQSY+SG+ +DLSI NAL+SLYARCGR Q+AYLAFEKID K+
Sbjct: 606  AISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKD 665

Query: 649  NISWNSLVSGFAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHA 708
            NISWN+L+SGFAQSG+ EEALQVF +M +   E N+FT+GSA+SA A+ ANIKQG+QIHA
Sbjct: 666  NISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHA 725

Query: 709  MVLKTGYDSEIEASNSLITLYAKCGSISDAWREFNDMPEKNVISWNAMITGYSQHGCGME 768
            M++KTGYDSE EASN LITLY+KCGSI DA REF +MPEKNV+SWNAMITGYSQHG G E
Sbjct: 726  MMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSE 785

Query: 769  SLRLFEEMKVYGIMPNHVTFVGVLSACSHIGLVKEGLDYFKSMYKMHDLVPKSEHYVCVV 828
            ++ LFEEMK  G+MPNHVTFVGVLSACSH+GLV EGL YF+SM K H LVPK EHYVCVV
Sbjct: 786  AVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVV 845

Query: 829  DLLGRAGLLDRAMEFIEEMPIPADAMIWRTLLSACVIHKNMEIGERAAHHLLELEPEDSA 888
            DLLGRA LL  A EFIEEMPI  DAMIWRTLLSAC +HKN+EIGE AA HLLELEPEDSA
Sbjct: 846  DLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSA 905

Query: 889  TYVLLSNIYAVSRKWVHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLANQ 948
            TYVLLSN+YAVS KW +RD +R++MKDRGVKKEPGRSWIEVKN++HAF+ GD+LHPLA Q
Sbjct: 906  TYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQ 965

Query: 949  IYEHIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPTMHVHSEKLAIAFGLLSLSNNIPIR 1008
            IYE+I  LN R  EIGYVQD ++LLN+ EQ QKDPT ++HSEKLA+AFGLLSL+N +PIR
Sbjct: 966  IYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIR 1025

Query: 1009 VMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFNGGICSCKDF 1056
            V+KNLRVCNDCHNWIK+VSKISNR+I+VRDA+RFHHF GG+CSCKD+
Sbjct: 1026 VIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDY 1072

The following BLAST results are available for this feature:

BLAST of Cla008471 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP307_ARATH	0.0e+00	60.24	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN...	[more]
PP373_ARATH	2.0e-181	37.06	Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th...	[more]
PP172_ARATH	8.4e-172	38.43	Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN...	[more]
PP210_ARATH	1.3e-164	36.62	Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN...	[more]
PP272_ARATH	1.9e-163	38.50	Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop...	[more]

BLAST of Cla008471 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHX6_CUCSA	0.0e+00	91.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486770 PE=4 SV=1	[more]
F6HLA9_VITVI	0.0e+00	72.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07510 PE=4 SV=...	[more]
A0A061F2V6_THECC	0.0e+00	69.50	Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Theobroma cacao ...	[more]
A0A061F3H7_THECC	0.0e+00	69.56	Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM...	[more]
A0A0D2SLJ6_GOSRA	0.0e+00	67.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G288400 PE=4 SV=1	[more]

BLAST of Cla008471 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080794\|ref\|XP_008440984.1\|	0.0e+00	92.80	PREDICTED: pentatricopeptide repeat-containing protein At4g13650 isoform X1 [Cuc...	[more]
gi\|659080796\|ref\|XP_008440985.1\|	0.0e+00	92.80	PREDICTED: pentatricopeptide repeat-containing protein At4g13650 isoform X2 [Cuc...	[more]
gi\|778717946\|ref\|XP_004142047.2\|	0.0e+00	91.76	PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Cucumis sativu...	[more]
gi\|700193200\|gb\|KGN48404.1\|	0.0e+00	91.69	hypothetical protein Csa_6G486770 [Cucumis sativus]	[more]
gi\|731400073\|ref\|XP_002282164.2\|	0.0e+00	71.50	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
biological_process	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process
biological_process	GO:0009186	deoxyribonucleoside diphosphate metabolic process
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0008150	biological_process
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005971	ribonucleoside-diphosphate reductase complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0004540	ribonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla008471	Cla008471.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 448..477 score: 0.0012coord: 824..847 score: 0.11coord: 317..343 score: 0.024coord: 218..239 score: 0.011coord: 246..273 score: 9.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 345..392 score: 1.4E-9coord: 547..594 score: 1.0E-10coord: 748..796 score: 4.1E-11coord: 647..693 score: 2.
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 509..546 score:
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 549..579 score: 1.2E-6coord: 347..381 score: 1.0E-7coord: 751..784 score: 1.9E-6coord: 246..279 score: 7.8E-6coord: 448..481 score: 7.3E-5coord: 650..678 score: 6.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 784..814 score: 7.136coord: 142..176 score: 7.399coord: 279..313 score: 5.689coord: 244..278 score: 10.709coord: 213..243 score: 5.985coord: 886..920 score: 6.029coord: 446..480 score: 10.633coord: 516..546 score: 7.914coord: 380..414 score: 7.399coord: 648..682 score: 11.093coord: 547..581 score: 12.255coord: 820..850 score: 6.566coord: 852..882 score: 5.097coord: 749..783 score: 11.915coord: 111..141 score: 5.678coord: 617..647 score: 7.837coord: 314..344 score: 7.98coord: 683..717 score: 6.445coord: 718..748 score: 7.783coord: 76..110 score: 7.476coord: 415..445 score: 5.031coord: 481..515 score: 6.884coord: 345..379 score: 11
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 614..690 score: 4.3E-12coord: 346..397 score: 4.3E-12coord: 519..577 score: 4.3E-12coord: 850..887 score: 4.3
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 611..745 score: 4.51E-5coord: 445..473 score: 4.5
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 198..371 score: 0.0coord: 473..582 score: 0.0coord: 618..927 score:
None	No IPR available	PANTHER	PTHR24015:SF447	SUBFAMILY NOT NAMED	coord: 473..582 score: 0.0coord: 198..371 score: 0.0coord: 618..927 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla008471	Cla97C01G014790	Watermelon (97103) v2	wmwmbB244
Cla008471	Csa6G486770	Cucumber (Chinese Long) v2	cuwmB502
Cla008471	MELO3C008015	Melon (DHL92) v3.5.1	mewmB571
Cla008471	CSPI06G26950	Wild cucumber (PI 183967)	cpiwmB521
Cla008471	Cucsa.101360	Cucumber (Gy14) v1	cgywmB137
Cla008471	CmaCh07G007740	Cucurbita maxima (Rimu)	cmawmB824
Cla008471	CmoCh07G007970	Cucurbita moschata (Rifu)	cmowmB814
Cla008471	Lsi01G011150	Bottle gourd (USVL1VR-Ls)	lsiwmB142
Cla008471	Cp4.1LG19g11900	Cucurbita pepo (Zucchini)	cpewmB483
Cla008471	CsGy6G026320	Cucumber (Gy14) v2	cgybwmB469
Cla008471	MELO3C008015.2	Melon (DHL92) v3.6.1	medwmB560
Cla008471	Carg05283	Silver-seed gourd	carwmB0803
Cla008471	Bhi03G001087	Wax gourd	wgowmB433

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla008471	Watermelon (97103) v2	wmwmbB259
Cla008471	Wax gourd	wgowmB373
Cla008471	Watermelon (97103) v1	wmwmB145
Cla008471	Cucumber (Gy14) v1	cgywmB469
Cla008471	Cucurbita maxima (Rimu)	cmawmB580
Cla008471	Cucurbita maxima (Rimu)	cmawmB629
Cla008471	Cucurbita moschata (Rifu)	cmowmB574
Cla008471	Cucurbita moschata (Rifu)	cmowmB620
Cla008471	Watermelon (Charleston Gray)	wcgwmB153
Cla008471	Watermelon (Charleston Gray)	wcgwmB193
Cla008471	Cucumber (Chinese Long) v2	cuwmB133
Cla008471	Cucurbita pepo (Zucchini)	cpewmB075
Cla008471	Cucurbita pepo (Zucchini)	cpewmB284
Cla008471	Cucurbita pepo (Zucchini)	cpewmB715
Cla008471	Bottle gourd (USVL1VR-Ls)	lsiwmB060
Cla008471	Cucumber (Gy14) v2	cgybwmB127
Cla008471	Silver-seed gourd	carwmB0226
Cla008471	Cucumber (Chinese Long) v3	cucwmB527