Cla008359 (gene) Watermelon (97103) v1

Overview
NameCla008359
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAt1g67150 (Fragment) (AHRD V1 *-*- B0FUD6_ARATH); contains Interpro domain(s) IPR004158 Protein of unknown function DUF247, plant
LocationChr1 : 10054450 .. 10057102 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCAATGCGAGGAAGGTAATAAATTATGGGATGATTTGTTTGACTCTGTTTTACTGGGATTTTGTTCTGAAATTTCCCCTTTGAGCGGCGGCGGCGGCTGCGGCGGCGGCGGGGTTATTGATTGTGTGCATGTTTTGGATGTTTTGTACCGTATGATTTTGCCGGAGGATTTGGGATGCTCCAACGAGGAGGTGGCGGCGGCGAGGAATAATAATAATAATAATAATAATAATAATAATGATTATTATAGTAGTGAGTTCGGAAATTCCAGGTCAGGTTTGAGGAATTTGTGGAAATTGGTAATGGATAGTGTAAATATTTTGAGGGGTTTTAAGAAAGCTTTTGAATTTATTGGACGTTTAATGGAGGTGTTGCCGGTCGTTGGGGGATTGGTTTCATCAATGGGAGAAGATTCCGGTGAAGATGGAAACAGAATCGAAGATAAAACGCCATTAATGGAAGCTGGCATCAAAGTTCCCACTGCCTCCCAACTTTTTGAAACAGGTTAGAAAATACTTCACCCTTTACAATGTTGTTAGTCTATTATTAATTCGAGTTTAGTGTCTATTTAAATTTCTAAAGTTTTGAAGTTTAAAATGTTACAATTTTATTTGAAGTTTGAGCTTTGTTACAATTTTAAGATTTACACTTTGTGTTTATAGATTGCGTTAGGTTGAGTTGAGTTAAAATACATTTTAAACTTAACCCAATTCTTTAGTTGTGAATTTTCTCAACTCAAACAATCCTTATAAAATAATGAATTTAAAATAAATCCGCGGGTTTGGGTTTATTACGATTTTTTATTCAAATTTTTGTTTTGAAAAAATAAAATAAAATGTTAGATATATAAAATTTGCGTTTTCAAACATTAGAATTAAGATATGCAGCTTAATTTCAATATCTGTTGAAAATTACATTTGAAAGACTTAAAAATTTGTGTGTTAAGAGTTTTTGGAGAATAAAAATCGAAAAAAATTCAAATGAAAAAAAATTAAAATAAATATACGTAAATATAATCTTATCATATGTAAAAATATGTATATAGTTTTGAAAATATAATAATAAGTTTGGGTTAAACAATTCAACGTATAAATTTTTTAATTATTTGACCTAACTCAATTCAAATTGTACAGGTTGGGTTGATCAAATTATTTAGGTCATTGGTCCTTTTGAATACCCTTACTTTGTAACATTGATTTGATTTTTTTACTAAATACTCAATTTCAATCTTTAGTATTAATGTCTATTAACTAATTTAAAAAATTAAAAGAATTATAATTAATAAGTTTCACTTTTTTTTATCACTATTGAAATTAATTTTAAAATTGGGTTGTTTTTAAATATAGTAAAATGAGTCAAACAATTTACAAATATAGAAAAATTCAAGCGATAGACTGCAATGAACTTCTATCACGGGGCAATATACTGCGATAGACTTATATCGCATAGTGATTGAAGTATAGCACTGAAATTCTTCTATATTTGTAAATAGTTTGATATTTTTTCCATTGTTGATAATTTCTCTTTAAAATTTCACTTCATAATTATTTTTAATTAATTAACATTAATACTAAGAGTAGAAAGTGACTAGTATTTAGTGAAAAGTTAGTTAAAATTGTAGATCTTGAAATCTAAAGACCAAATTGAAACGAAACTCAAAACTTAAGGATAAAATTATAACATTTTAAAATCTAATGACTAAATTGATATCAAACTCAAAACTTAAAGAACTAAAAGTGTAACATTCTTAAATTTAGAAACCAAATACAAACGATAGACCAAAAACTCAAGGAACAAAAAAAAAAAAAAGAAAAAATAGTTTTCCCTAATTAGTATTATTAATCTTTTCTCAAAACTTAACGACAAACTGTAAAATTGAGTCTCAAACTAATACAAAGTGTTAAAATTGAAGTCTCAAACTTATACAATTGTTACAATTTCTACAAAGTTCGAGTGTCCTAACAAAAATATTTAGGGTGATTTCTCCCATTTGCCCTTTGTTCCACTTTACTTGCAAACAACATGAAATATTTTGGTATTAGTATTAAAAATTAAAATTTCTAACAAGGGTCTTGATGAATTTAATGCACAGGAGTTAGCTTCAAACCCATCACAAGCATCAAAACAATCAAATTCGATGAAGAAACCGTCACATTCTTCCTCCCAGTGATCAAAATCAGCCCAACCTCAGAAGTAATTTTAAGAAATTTAGTTGCTTATGAAGCAATGGCAATGCCCCAACATTCCTTAATTTTCACTCGCTACTTACATTTAATGAACAATTTCATCGACACAGCAGAGGATGTCAAAATCCTCAAAGATTCAAAAATTCTTGTCATCACTGACATGAAAAAAGATGAAGAAATTGCAATTCTTTTCAATGGAATAATGGCTAACAATTATTCCATTGGATTAAGCCCTGCAAAAGAGCTCGACCAAGCCATAAATGGAGTTAATAAATACTATCAAAGAAGGCCTAAAGTGAAGGCAAACAGGATGATTAAGAAATATGTTTATAGTTCTTGGAGGATTTTGACTTTAATTGCTACTGTTTTGATTTTGGGGTTGTTGGTTTTGCAATCGTTTTGCTCTGTCTATAATTGTCCTCGCTTGTTTGGAACTGATAAAATTGGGGGAACTGATTCTTAA

mRNA sequence

ATGATTCAATGCGAGGAAGGTAATAAATTATGGGATGATTTGTTTGACTCTGTTTTACTGGGATTTTGTTCTGAAATTTCCCCTTTGAGCGGCGGCGGCGGCTGCGGCGGCGGCGGGGTTATTGATTGTGTGCATGTTTTGGATGTTTTGTACCGTATGATTTTGCCGGAGGATTTGGGATGCTCCAACGAGGAGGTGGCGGCGGCGAGGAATAATAATAATAATAATAATAATAATAATAATGATTATTATAGTAGTGAGTTCGGAAATTCCAGGTCAGGTTTGAGGAATTTGTGGAAATTGGTAATGGATAGTGTAAATATTTTGAGGGGTTTTAAGAAAGCTTTTGAATTTATTGGACGTTTAATGGAGGTGTTGCCGGTCGTTGGGGGATTGGTTTCATCAATGGGAGAAGATTCCGGTGAAGATGGAAACAGAATCGAAGATAAAACGCCATTAATGGAAGCTGGCATCAAAGTTCCCACTGCCTCCCAACTTTTTGAAACAGGAGTTAGCTTCAAACCCATCACAAGCATCAAAACAATCAAATTCGATGAAGAAACCGTCACATTCTTCCTCCCAGTGATCAAAATCAGCCCAACCTCAGAAGTAATTTTAAGAAATTTAGTTGCTTATGAAGCAATGGCAATGCCCCAACATTCCTTAATTTTCACTCGCTACTTACATTTAATGAACAATTTCATCGACACAGCAGAGGATGTCAAAATCCTCAAAGATTCAAAAATTCTTGTCATCACTGACATGAAAAAAGATGAAGAAATTGCAATTCTTTTCAATGGAATAATGGCTAACAATTATTCCATTGGATTAAGCCCTGCAAAAGAGCTCGACCAAGCCATAAATGGAGTTAATAAATACTATCAAAGAAGGCCTAAAGTGAAGGCAAACAGGATGATTAAGAAATATGTTTATAGTTCTTGGAGGATTTTGACTTTAATTGCTACTGTTTTGATTTTGGGGTTGTTGGTTTTGCAATCGTTTTGCTCTGTCTATAATTGTCCTCGCTTGTTTGGAACTGATAAAATTGGGGGAACTGATTCTTAA

Coding sequence (CDS)

ATGATTCAATGCGAGGAAGGTAATAAATTATGGGATGATTTGTTTGACTCTGTTTTACTGGGATTTTGTTCTGAAATTTCCCCTTTGAGCGGCGGCGGCGGCTGCGGCGGCGGCGGGGTTATTGATTGTGTGCATGTTTTGGATGTTTTGTACCGTATGATTTTGCCGGAGGATTTGGGATGCTCCAACGAGGAGGTGGCGGCGGCGAGGAATAATAATAATAATAATAATAATAATAATAATGATTATTATAGTAGTGAGTTCGGAAATTCCAGGTCAGGTTTGAGGAATTTGTGGAAATTGGTAATGGATAGTGTAAATATTTTGAGGGGTTTTAAGAAAGCTTTTGAATTTATTGGACGTTTAATGGAGGTGTTGCCGGTCGTTGGGGGATTGGTTTCATCAATGGGAGAAGATTCCGGTGAAGATGGAAACAGAATCGAAGATAAAACGCCATTAATGGAAGCTGGCATCAAAGTTCCCACTGCCTCCCAACTTTTTGAAACAGGAGTTAGCTTCAAACCCATCACAAGCATCAAAACAATCAAATTCGATGAAGAAACCGTCACATTCTTCCTCCCAGTGATCAAAATCAGCCCAACCTCAGAAGTAATTTTAAGAAATTTAGTTGCTTATGAAGCAATGGCAATGCCCCAACATTCCTTAATTTTCACTCGCTACTTACATTTAATGAACAATTTCATCGACACAGCAGAGGATGTCAAAATCCTCAAAGATTCAAAAATTCTTGTCATCACTGACATGAAAAAAGATGAAGAAATTGCAATTCTTTTCAATGGAATAATGGCTAACAATTATTCCATTGGATTAAGCCCTGCAAAAGAGCTCGACCAAGCCATAAATGGAGTTAATAAATACTATCAAAGAAGGCCTAAAGTGAAGGCAAACAGGATGATTAAGAAATATGTTTATAGTTCTTGGAGGATTTTGACTTTAATTGCTACTGTTTTGATTTTGGGGTTGTTGGTTTTGCAATCGTTTTGCTCTGTCTATAATTGTCCTCGCTTGTTTGGAACTGATAAAATTGGGGGAACTGATTCTTAA

Protein sequence

MIQCEEGNKLWDDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPEDLGCSNEEVAAARNNNNNNNNNNNDYYSSEFGNSRSGLRNLWKLVMDSVNILRGFKKAFEFIGRLMEVLPVVGGLVSSMGEDSGEDGNRIEDKTPLMEAGIKVPTASQLFETGVSFKPITSIKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRYLHLMNNFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAINGVNKYYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLFGTDKIGGTDS
Homology
[Close]
BLAST of Cla008359 vs. Swiss-Prot
Match: Y3264_ARATH (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-38
Identity = 123/355 (34.65%), Postives = 182/355 (51.27%), Query Frame = 1 

Query: 6   EGNKLWDDLFDSVLLGFCSEISPLS---GGGGCGGGGVIDCVHVLDVLYRMILP----ED 65
           E  +  DDL  SVL G C ++SPL               +C H+LD LY+MI+P    E+
Sbjct: 189 ESTESADDLLLSVLTGLCKDLSPLVIKFDDDQILKAQFQECNHILDFLYQMIVPRIEEEE 248

Query: 66  LGCSNEEVAAARNNNNNNNNNNNDYYSSEFGNSRSGLRNLWKLVMDSVNILRGFKKAFEF 125
           L   +EE     N  + N  N    +  E       +++ +K V  S    R       F
Sbjct: 249 LEEDDEE-----NRADENGGNRAIRFMDE-------IKHQFKRVFAS----RPADLILRF 308

Query: 126 IGRLMEVLPVVGGLVSSMG-----EDSGEDGNRIE-------DKTPLMEAGIKVPTASQL 185
             R++  LP    L  S       +++     R E       +K PL+E  + +P+ S L
Sbjct: 309 PWRIISNLPGFMALKLSADYLFTRQENEATTTRQESVSILDIEKPPLVEE-LTIPSVSDL 368

Query: 186 FETGVSFKPIT--SIKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIF 245
            + GV FKP    +I T+ FD  +  F+LPVI +   +E +LRNLVAYEA       L+F
Sbjct: 369 HKAGVRFKPTAHGNISTVTFDSNSGQFYLPVINLDINTETVLRNLVAYEA-TNTSGPLVF 428

Query: 246 TRYLHLMNNFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELD 305
           TRY  L+N  ID+ EDV++L++  +LV + +K D+E A ++NG+   + S+ L+    LD
Sbjct: 429 TRYTELINGIIDSEEDVRLLREQGVLV-SRLKSDQEAAEMWNGM---SKSVRLTKVGFLD 488

Query: 306 QAINGVNKYYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYN 340
           + I  VN+YY  R KVK  R+++ YVY SW+IL  +A VL+L L+ LQ F  V++
Sbjct: 489 KTIEDVNRYYTGRWKVKIGRLVEVYVYGSWQILAFLAAVLLLMLVSLQLFSLVFS 521

[Close]
BLAST of Cla008359 vs. TrEMBL
Match: V4SPD7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027555mg PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.6e-47
Identity = 123/344 (35.76%), Postives = 191/344 (55.52%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPEDLGCSNEEVAAARN 71
           D++  ++L+GFC E+SP           + +  H+L  LY M++P+    ++E +     
Sbjct: 204 DEMLQAMLMGFCEELSPFKLMKDMPMINISESAHLLGYLYDMVVPKSEQKASEIIEVV-- 263

Query: 72  NNNNNNNNNNDYYSSEFGNSRSGLRNLWKLVMD-SVNILRGFKKAFEFIGRLMEVLPVVG 131
           ++        + YS++   S    R +WKLV   ++  +R  K     +  L        
Sbjct: 264 DDVGEAKQPQERYSTDLAYSNKLFREVWKLVSKLTIRPIRLIKNLLPLLSILARQFQY-- 323

Query: 132 GLVSSMGEDSGEDGNRIE------DKTPLMEAGIKVPTASQLFETGVSFKPIT-SIKTIK 191
            L+   G  SG+DG+         +K PL+E  I +P+ ++L+++ V+F  +  +I T+ 
Sbjct: 324 -LLFREGNKSGDDGSSSHPSESDVNKPPLVEE-ITIPSVTELYKSNVTFSAVVGNISTVS 383

Query: 192 FDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRYLHLMNNFIDTAEDVKI 251
           FD ET T  LP I +   S V+LRNLVAYEA +     LIFTRY   MN  IDT ED K+
Sbjct: 384 FDAETATLHLPTISLDVNSNVVLRNLVAYEA-SNASGPLIFTRYTEFMNGIIDTEEDAKL 443

Query: 252 LKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAINGVNKYYQRRPKVKAN 311
           L++ K +++  +K D E+A L+NG+   + SI L+    +D+ I GVNK+Y  + KVK  
Sbjct: 444 LRE-KGIIVNRLKSDAEVAHLWNGM---SRSIRLTKVPHIDKVIEGVNKHYNSQWKVKFG 503

Query: 312 RMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLFGTD 348
           + +K YV+ SW+ LTLIAT+++L L+ LQ FCSVY C R F TD
Sbjct: 504 KYMKYYVFGSWQFLTLIATIMLLFLMTLQGFCSVYTC-RKFDTD 535

[Close]
BLAST of Cla008359 vs. TrEMBL
Match: A0A061G7W1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_027333 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.7e-47
Identity = 129/354 (36.44%), Postives = 194/354 (54.80%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPEDLGCSNEEVAAARN 71
           DDL  S+L G C E+SP           V +  H+LD LY MI+P+    +  E++   +
Sbjct: 208 DDLLLSMLTGVCKELSPFKMMKVLPKIRVSETSHLLDCLYDMIVPKLQPRTTSEISEIED 267

Query: 72  NNNNNNNNNNDYYSSEFGNSRSGLRNLWKLV----------MDSVNILRGFKKAFEFIGR 131
            N +         S + G  +  L  +WKL+          +  + + +  K  F+    
Sbjct: 268 QNEDMKGKEGS--SEDPGYVQQLLSEVWKLLSKLNKGPIHLIKKLLVSKPIKVIFKLPWI 327

Query: 132 LMEVLPVVGGLVSSMG----------EDSGEDGNRIEDKTPLMEAGIKVPTASQLFETGV 191
           ++  LP    L   +           +D  E      DK PL+E  I +P+ S+L  +GV
Sbjct: 328 IISKLPGFSILKQPVEYFFFNEENKEDDKSEGEGSGADKPPLVEE-ITIPSVSELSNSGV 387

Query: 192 SFKPIT-SIKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRYLHL 251
            F P T ++ TI FD +TVTF+LP + +   +EVI+RNLVAYEA +     L+FTRY  L
Sbjct: 388 RFLPTTGNLLTITFDVKTVTFYLPTVSLDVNTEVIMRNLVAYEA-SNASGPLVFTRYTEL 447

Query: 252 MNNFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAINGV 311
           MN  IDT EDVK+L++ K +++  +K+D+E A L+NG+   + SI L+    LD+AI  V
Sbjct: 448 MNGIIDTEEDVKLLRE-KGIILNRLKRDQEAADLWNGM---SKSIRLTKVPFLDKAIEEV 507

Query: 312 NKYYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLF 345
           NKY+  R  +KA  M+K YV+ SW+ LT +A +L+L L+ LQ+FCSVY+C R+F
Sbjct: 508 NKYHNGRWNIKAKNMMKSYVFGSWQFLTFMAAILLLLLMALQAFCSVYSCSRVF 553

[Close]
BLAST of Cla008359 vs. TrEMBL
Match: A0A0D2TIN7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G125900 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.5e-47
Identity = 128/361 (35.46%), Postives = 192/361 (53.19%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPEDLGCSNEEVAAARN 71
           DDL  S++ G C E+SP           + +  H+LD LY  I+P+    +  E++   +
Sbjct: 205 DDLLLSMITGLCKELSPFKMMKVLPKIHLSEASHLLDCLYDRIVPKIQIRTTSEISELED 264

Query: 72  NNNNNNNNNNDYYSSEFGNSRSGLRNLWKL--------------VMDSVNILRGFKKAFE 131
            N  N          + G  +  L  +W L              ++ S  I   FK  + 
Sbjct: 265 PNETNKGKRESSQDQDPGYVQKVLCAIWNLLSNLNKGPISLIKKILSSKPIKLIFKLPWT 324

Query: 132 FIGRL--MEVLPVVGGLVSSMGEDSG--EDGNRIEDKTPLMEAGIKVPTASQLFETGVSF 191
            + +L    +L     L  + G+  G   D     DK PL+E  I +P+ S+L ++GV F
Sbjct: 325 VLSKLPGFSILKQPMELFFNGGDSEGAKSDEESSADKPPLVEE-ITIPSVSELSDSGVRF 384

Query: 192 KPIT-SIKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRYLHLMN 251
            P T +I +I FD +T T +LP I +   +EVILRNLVAYEA +     L+FTRY  +MN
Sbjct: 385 LPTTGNISSITFDPKTFTLYLPTISLDVNTEVILRNLVAYEA-SNASGPLVFTRYTEMMN 444

Query: 252 NFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAINGVNK 311
             IDT +DVK+L++ K +++  +K DEE A ++NG+   + SI L+    LD+ I  VNK
Sbjct: 445 GIIDTGDDVKLLRE-KGIILNHLKSDEEAADVWNGM---SKSIRLTKVPFLDKTIEEVNK 504

Query: 312 YYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLFGTDKIGGT 354
           Y+  R  +KA  M+K YV+ SW+ILT +A +L+L L+ LQ+FCSVY+C R+F  D     
Sbjct: 505 YHNGRWNIKAKNMMKSYVFGSWQILTFLAAILLLLLMTLQAFCSVYSCSRVFRIDAADAN 559

[Close]
BLAST of Cla008359 vs. TrEMBL
Match: A0A0A0K8N9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432200 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.8e-45
Identity = 135/366 (36.89%), Postives = 199/366 (54.37%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPEDLGCSNEEVAAARN 71
           + L  S+LLG C ++SP           V +C H+LD LYRMI P+ L    E +   +N
Sbjct: 217 NQLLLSMLLGLCEDLSPFEMLEP--QVSVSECFHLLDFLYRMITPK-LADPLEILENDQN 276

Query: 72  NNNNNNNNNNDYYS-SEFGNSRSGLRN-LWKLVMD----SVNILRGF--KKAFEFIGRLM 131
              +   N  D  +   F  S S L + +WK++       V++ R     +  + I +L 
Sbjct: 277 QKESTKENFEDENAFKHFCCSLSRLGSEIWKILSKFNKGPVHLFRRILNSRPLQVIFKLP 336

Query: 132 EVLPVVGGLVSSMGE-------DSGEDGNRIED---------KTPLMEAGIKVPTASQLF 191
            ++  + G+V  M           GE+ N +E          K PL E  I +P+ SQL 
Sbjct: 337 TIVSKLPGIVVLMKPLNHLCSLRKGEEENDLEKGSSWKVGKIKLPLSEE-IAIPSVSQLT 396

Query: 192 ETGVSFKPITS-IKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTR 251
           ++GV F  I   +  + FD + V F+LP I +   SEV+LRNLVAYEA +     L+FTR
Sbjct: 397 KSGVHFSAIDGGVSAVAFDPKAVIFYLPTINLDVNSEVVLRNLVAYEA-SKASGPLVFTR 456

Query: 252 YLHLMNNFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQA 311
           ++ LMN  ID+ EDVK+LK+ K +++  +K D E+A L+NG+   + SI L+    LD+ 
Sbjct: 457 FIELMNGIIDSEEDVKLLKE-KGIILNHLKSDAEVADLWNGM---SKSIKLTKVPFLDKV 516

Query: 312 INGVNKYYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLFGT 353
           I  VNKYY  R KVKA++ +KKYV+ SW +L  +AT+L+L +  LQ+FCSVY+C R F  
Sbjct: 517 IEDVNKYYSGRWKVKASKFVKKYVFGSWPLLAFLATILLLAMTALQAFCSVYSCSRFFHH 573

[Close]
BLAST of Cla008359 vs. TrEMBL
Match: A0A061G956_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_027342 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.8e-45
Identity = 128/356 (35.96%), Postives = 193/356 (54.21%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILP--EDLGCSNEEVAAA 71
           DD+  S+L G C E+SP           +  C HVLD LY MI+P  ++   +NE    A
Sbjct: 207 DDMLLSMLRGLCQELSPFKMMENMPKIDISRCAHVLDFLYDMIVPKVDEPSITNE----A 266

Query: 72  RNNNNNNNNNNNDYYSSEFGNSRSGLRNLWKLV----------MDSVNILRGFKKAFEFI 131
            +      +  +D  S++    +  L  +W L+          + +V + R  +   +  
Sbjct: 267 EDQKEAPEDKQSDIDSTDPSYLKQLLSEVWNLLSKIKRGPLRLIKAVLLSRPVRVILKLP 326

Query: 132 GRLMEVLPVVGGLVSSM-----GEDSGEDGNRIE---DKTPLMEAGIKVPTASQLFETGV 191
            +++  LP    L   +      +D  E+ +      +K PL+E  I +P+ + L ++GV
Sbjct: 327 WKILSNLPGFSILKQPIEYLLFSQDKEEEKSETSSGLNKPPLVEE-IAIPSVADLSKSGV 386

Query: 192 SFKPIT-SIKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRYLHL 251
            F P   SI  I FD +TVT +LP I +   +EV+LRNLVAYEA +     LIFTRY  L
Sbjct: 387 RFSPTNGSISNISFDVKTVTLYLPTISLDINTEVVLRNLVAYEA-SNASGPLIFTRYTEL 446

Query: 252 MNNFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAINGV 311
           MN  IDT EDVK+L++S + V+  +K DEE A L+NG+   + SI L+    LD+AI  V
Sbjct: 447 MNGIIDTEEDVKLLRESGV-VLNHLKSDEEAADLWNGM---SKSIRLTKVPFLDKAIEDV 506

Query: 312 NKYYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLFGT 347
           N+Y+  R  +KA    K YVY SW+ LTL+A +++L L+  Q+FC+VY+C R+ GT
Sbjct: 507 NRYHNCRWNIKARNFFKHYVYGSWQFLTLLAAIMLLILMTFQAFCTVYSCFRILGT 552

[Close]
BLAST of Cla008359 vs. NCBI nr
Match: gi|719982283|ref|XP_010250393.1| (PREDICTED: putative UPF0481 protein At3g02645 [Nelumbo nucifera])

HSP 1 Score: 206.8 bits (525), Expect = 6.1e-50
Identity = 133/357 (37.25%), Postives = 200/357 (56.02%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPEDLGCSNEEVAAARN 71
           DDL   +L+G C E+SPL          V    H+LD+LYR+I+P       +EV     
Sbjct: 37  DDLLSFILMGLCKELSPLKTEN-FSLLQVSQHAHLLDLLYRVIVPNS--DEPQEVLDCEE 96

Query: 72  NNNNNNNNNNDYYSSEFGNSRSGLRNLWKLV----------MDSVNILRGFKKAFEFIGR 131
           N  N      +   S   N +  L  +WKL+          ++ + +LR  K  F    +
Sbjct: 97  NEQNEETKVEEGSDSSSSNIKQLLSEIWKLISAFNIGMVRLLEKILLLRPIKLIFALPWK 156

Query: 132 LMEVLPVVGGLVSSMGED--SGEDGNRIE-----------DKTPLMEAGIKVPTASQLFE 191
           ++  LP +  +   + +   S +D   I+           +K PL+E  I +P+ S+L  
Sbjct: 157 MIPNLPGISIIKEPIDKFFVSHQDKETIKPDNESLRSQKIEKHPLVEE-IMIPSVSELHN 216

Query: 192 TGVSF-KPITSIKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRY 251
           +GV+F K   +I T+ FDE+T + +LP I +   +EV++RNLVAYEA +     L+FTRY
Sbjct: 217 SGVNFCKTNGNITTVGFDEKTTSLYLPTISLDVNTEVMMRNLVAYEASSA-SGPLVFTRY 276

Query: 252 LHLMNNFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAI 311
             LMN  IDT EDVK+L++ K +++  +K D E+A L+NG+   + SI L+    LD+ I
Sbjct: 277 TELMNGIIDTVEDVKLLRE-KGIIVNRLKSDREVAKLWNGM---SKSIRLTRVLFLDKTI 336

Query: 312 NGVNKYYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLF 345
             VNKYY  R KVKA++ +KKYV+ SW++LTL+AT+L+L L  LQ+FCSVY+C R F
Sbjct: 337 EDVNKYYNGRWKVKASKFMKKYVFGSWKLLTLVATILLLLLTTLQAFCSVYSCARAF 384

[Close]
BLAST of Cla008359 vs. NCBI nr
Match: gi|731352969|ref|XP_010687822.1| (PREDICTED: putative UPF0481 protein At3g02645 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 203.4 bits (516), Expect = 6.7e-49
Identity = 134/357 (37.54%), Postives = 202/357 (56.58%), Query Frame = 1 

Query: 2   IQCEEGNKLWDDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPEDLGC 61
           IQC   + L ++L  S+L+G C E+SPL    G      I C H+LD+LY +I+P+ L  
Sbjct: 191 IQCLSSD-LAENLLPSMLMGVCRELSPLVLDEGYPMSEAIQCAHLLDLLYHLIVPK-LEQ 250

Query: 62  SNEEVAAARNNNNNNNNNNNDYYSSEFGNSRSGLRNLWKL-----VMDSVNILRGFKKAF 121
             EE+      N  +  + +      FG  +    N W++     ++  + I+     A 
Sbjct: 251 GEEEIQVTFLPNKFDEEDPS------FGEIKEVFTNSWEMASKLKIISKMPIVSAIAPAL 310

Query: 122 E--FIGRLMEVLPVVGGLVSSMGEDSGEDGNRIEDKT--PLMEAGIKVPTASQLFETGVS 181
           E  F+G   E            G  + ++G+  +D    PL+E  I +P+   L + GV 
Sbjct: 311 ESIFLGNKHE-----------KGSSTVKNGSLQKDAQVIPLVEE-IMIPSVENLCDAGVE 370

Query: 182 FKPITS-IKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRYLHLM 241
           F P    I TI+FD++ + F+L V+ I   +EV++RNLVAYEA A P   L+  RY  LM
Sbjct: 371 FCPTNGDISTIQFDKKLMKFYLHVVLIDGNTEVLMRNLVAYEASATPC-PLVLERYTELM 430

Query: 242 NNFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAINGVN 301
           N  IDTA+DV+IL+  KI+V   + +DEE+A L+NG+     +I L+    +D+AI  VN
Sbjct: 431 NGIIDTAKDVEILRKKKIIVCR-LLRDEEVANLWNGMTK---AIRLTKVSFIDKAIEDVN 490

Query: 302 KYYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLFGTDK 349
            Y+    K K +++ K+YVY+SWRIL ++AT+L+LGL+VLQSFCSVY+CPR F  D+
Sbjct: 491 GYFNNTLKRKLHKLTKRYVYNSWRILVVLATLLLLGLMVLQSFCSVYSCPRFFNIDE 522

[Close]
BLAST of Cla008359 vs. NCBI nr
Match: gi|802604076|ref|XP_012073424.1| (PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas])

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48
Identity = 127/348 (36.49%), Postives = 193/348 (55.46%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPE----------DLGC 71
           D++  S+L GFC E+SP           +  C H+LD LY MI+P+          D+  
Sbjct: 205 DEMLLSMLDGFCKELSPFKMMKDSKEIPISQCSHLLDYLYDMIVPKVEAPPVPEITDVVG 264

Query: 72  SNEEVAAARNNNNNNNNNNNDYYSSEFGNSRSGLRNLWKLVMDSVNILRGFKKAFEFIGR 131
            + E    +  ++ N++   D +S            +WK++         F K   F   
Sbjct: 265 DDLEAMQGKERSSGNSSYIKDLFSE-----------IWKIISKINKGPFRFLKKILFSRP 324

Query: 132 LMEVLPVVGGLVSSMGEDSGEDG----NRIEDKTPLMEAGIKVPTASQLFETGVSFKPIT 191
           +  VL +   ++S++ ED+ E      N   +K PL+E  I +P  + L ++GV F P T
Sbjct: 325 VKLVLKLPWTILSNLPEDNEETKPEKENNEANKPPLVEE-IAIPCVTDLVKSGVRFSPTT 384

Query: 192 -SIKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRYLHLMNNFID 251
            +I ++ FD + VTF+LP++ I   +EV+LRNLVAYEA +     L+FTRY  LMN  ID
Sbjct: 385 GNISSVNFDAKMVTFYLPIVSIDVNTEVVLRNLVAYEA-SNASGPLVFTRYTELMNGIID 444

Query: 252 TAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAINGVNKYYQR 311
           T EDVK+L++ K +++  +K D+E A L+NG+   + SI L+    LD+ I  VNKYY  
Sbjct: 445 TDEDVKLLRE-KGIILNRLKSDQEAADLWNGM---SKSIRLTKVPFLDKVIEDVNKYYDG 504

Query: 312 RPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLF 345
           R K+K    +K YV+ SW+ LTL+A + +L L+ LQ+FCSVYNC R+F
Sbjct: 505 RWKIKVGNFVKHYVFGSWQFLTLVAAIFLLLLMTLQAFCSVYNCARIF 535

[Close]
BLAST of Cla008359 vs. NCBI nr
Match: gi|567869767|ref|XP_006427505.1| (hypothetical protein CICLE_v10027555mg [Citrus clementina])

HSP 1 Score: 197.6 bits (501), Expect = 3.7e-47
Identity = 123/344 (35.76%), Postives = 191/344 (55.52%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPEDLGCSNEEVAAARN 71
           D++  ++L+GFC E+SP           + +  H+L  LY M++P+    ++E +     
Sbjct: 204 DEMLQAMLMGFCEELSPFKLMKDMPMINISESAHLLGYLYDMVVPKSEQKASEIIEVV-- 263

Query: 72  NNNNNNNNNNDYYSSEFGNSRSGLRNLWKLVMD-SVNILRGFKKAFEFIGRLMEVLPVVG 131
           ++        + YS++   S    R +WKLV   ++  +R  K     +  L        
Sbjct: 264 DDVGEAKQPQERYSTDLAYSNKLFREVWKLVSKLTIRPIRLIKNLLPLLSILARQFQY-- 323

Query: 132 GLVSSMGEDSGEDGNRIE------DKTPLMEAGIKVPTASQLFETGVSFKPIT-SIKTIK 191
            L+   G  SG+DG+         +K PL+E  I +P+ ++L+++ V+F  +  +I T+ 
Sbjct: 324 -LLFREGNKSGDDGSSSHPSESDVNKPPLVEE-ITIPSVTELYKSNVTFSAVVGNISTVS 383

Query: 192 FDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQHSLIFTRYLHLMNNFIDTAEDVKI 251
           FD ET T  LP I +   S V+LRNLVAYEA +     LIFTRY   MN  IDT ED K+
Sbjct: 384 FDAETATLHLPTISLDVNSNVVLRNLVAYEA-SNASGPLIFTRYTEFMNGIIDTEEDAKL 443

Query: 252 LKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPAKELDQAINGVNKYYQRRPKVKAN 311
           L++ K +++  +K D E+A L+NG+   + SI L+    +D+ I GVNK+Y  + KVK  
Sbjct: 444 LRE-KGIIVNRLKSDAEVAHLWNGM---SRSIRLTKVPHIDKVIEGVNKHYNSQWKVKFG 503

Query: 312 RMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNCPRLFGTD 348
           + +K YV+ SW+ LTLIAT+++L L+ LQ FCSVY C R F TD
Sbjct: 504 KYMKYYVFGSWQFLTLIATIMLLFLMTLQGFCSVYTC-RKFDTD 535

[Close]
BLAST of Cla008359 vs. NCBI nr
Match: gi|1009146069|ref|XP_015890680.1| (PREDICTED: putative UPF0481 protein At3g02645 [Ziziphus jujuba])

HSP 1 Score: 196.8 bits (499), Expect = 6.3e-47
Identity = 129/364 (35.44%), Postives = 192/364 (52.75%), Query Frame = 1 

Query: 12  DDLFDSVLLGFCSEISPLSGGGGCGGGGVIDCVHVLDVLYRMILPE-----DLGCSNEEV 71
           DD+  S+L+GFC E+SP           V +C H+LD LY MI P      D     +E 
Sbjct: 207 DDILFSMLMGFCKELSPFKMVEDMPKLSVSECAHLLDFLYNMITPNVEEPSDQIIEVDED 266

Query: 72  AAARNNNNNNNNNNNDYYSSEFGNSRSGLRNLWKLVMD-SVNILRGFKKA---------- 131
            +        ++ ++  Y  +F      LR +WKL+       +R  KK           
Sbjct: 267 QSEATTGEEKSSLDDSKYVKQF------LREVWKLLSKLKAGPIRLIKKVLVSKPLKVII 326

Query: 132 ------------FEFIGRLMEVLPVVGGLVSSMGEDSGEDGNRIEDKTPLMEAGIKVPTA 191
                       F  + + +E+   +G       ED     N I  + PL+E  I +P+ 
Sbjct: 327 KLLWTILSNLPGFRILKQPVEIFSSIGDKEEIKPEDENSSSNNIISRPPLVEE-ITIPSV 386

Query: 192 SQLFETGVSFKPIT---SIKTIKFDEETVTFFLPVIKISPTSEVILRNLVAYEAMAMPQH 251
           ++L ++GV F       S  ++ FD +TVTF LP I +   ++VILRNLVAYEA +    
Sbjct: 387 TELSKSGVQFVATNCCISSSSVSFDAKTVTFCLPTISLDLNTKVILRNLVAYEA-SNATG 446

Query: 252 SLIFTRYLHLMNNFIDTAEDVKILKDSKILVITDMKKDEEIAILFNGIMANNYSIGLSPA 311
            L+FTRY  LMN  IDT EDVK+L++ +I +   +K D+++A L+NG+   + SI L+  
Sbjct: 447 PLVFTRYTELMNGIIDTEEDVKLLREKRI-IWNHLKSDKDVANLWNGM---SRSIRLTKV 506

Query: 312 KELDQAINGVNKYYQRRPKVKANRMIKKYVYSSWRILTLIATVLILGLLVLQSFCSVYNC 345
             LD+ I GVNKY+  R KVK   ++K YV+ SW++LTL+A VL+L L+ L++FCSVY C
Sbjct: 507 PFLDKVIEGVNKYHNGRWKVKFGTIMKLYVFGSWQLLTLLAAVLLLLLMGLEAFCSVYGC 558

The following BLAST results are available for this feature:
BLAST of Cla008359 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3264_ARATH1.8e-3834.65Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=... [more]
BLAST of Cla008359 vs. TrEMBL
Match NameE-valueIdentityDescription
V4SPD7_9ROSI2.6e-4735.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027555mg PE=4 SV=1[more]
A0A061G7W1_THECC5.7e-4736.44Uncharacterized protein OS=Theobroma cacao GN=TCM_027333 PE=4 SV=1[more]
A0A0D2TIN7_GOSRA7.5e-4735.46Uncharacterized protein OS=Gossypium raimondii GN=B456_009G125900 PE=4 SV=1[more]
A0A0A0K8N9_CUCSA1.8e-4536.89Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432200 PE=4 SV=1[more]
A0A061G956_THECC1.8e-4535.96Uncharacterized protein OS=Theobroma cacao GN=TCM_027342 PE=4 SV=1[more]
BLAST of Cla008359 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|719982283|ref|XP_010250393.1|6.1e-5037.25PREDICTED: putative UPF0481 protein At3g02645 [Nelumbo nucifera][more]
gi|731352969|ref|XP_010687822.1|6.7e-4937.54PREDICTED: putative UPF0481 protein At3g02645 [Beta vulgaris subsp. vulgaris][more]
gi|802604076|ref|XP_012073424.1|1.5e-4836.49PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas][more]
gi|567869767|ref|XP_006427505.1|3.7e-4735.76hypothetical protein CICLE_v10027555mg [Citrus clementina][more]
gi|1009146069|ref|XP_015890680.1|6.3e-4735.44PREDICTED: putative UPF0481 protein At3g02645 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004158DUF247_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla008359Cla008359.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 19..327
score: 1.5
NoneNo IPR availablePANTHERPTHR31549FAMILY NOT NAMEDcoord: 137..349
score: 1.7E-86coord: 12..59
score: 1.7
NoneNo IPR availablePANTHERPTHR31549:SF23SUBFAMILY NOT NAMEDcoord: 137..349
score: 1.7E-86coord: 12..59
score: 1.7