Cla008093 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla008093
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein (AHRD V1 **-- Q0WLX9_ARATH); contains Interpro domain(s) IPR010847 Harpin-induced 1
Location	Chr3 : 78340 .. 79077 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAATAATGTTGCTGCTAATCAACTTGATCGACTTCCAAGCCAAAACAAAGGATCACGCCGGGTGGCGTTCTCCGATTCCCTTCCTAAACACCGACCTACATCCAACGATAGTAACTCTGAGCATTGCAACAAATGTTGTTGTCCTCGTTTATTTGCTTGTTGCGCTTGGATTTGTCTTGGGGTTTTCGGAATTGTTGTTGCCATTCTTATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGAACTTGTCCAAATTCGAGATTGGAAATTCCACAAATCAGAATAATGTTGTGTTAAATGCAAAAGTAGATATGTCAATCGAGATGAGGAACAAGAACGAAAAAATAGAGTTGAGTTATAGCAATATTGTGGTGAATTTGGCGTCAGAAGATGTGAAATTGGGAAGGAGTGTGATTCCCGGTTTCTCTCACGATCCTGGAAATACCACATACTTTAATGTAACTATGAATGTTGTGGGAGATTCCACAGATAAAGACAATGTATTGCAACTAGAAGATGATCGAAAAAGGGTGCAAATGAATGTGCATGTGACAATGGAGGCTACAGTTGATTTTCATGTTGGGATATTCAAATTGAACAAGGTGCCAATCCATGTAGCATGTGATTTTCGACAGTTCCTTCTTTTATATCGAATAAACGAGCCCCCATGTAATATTAGAATGTTTCCCAACCTCAGGTAA

mRNA sequence

ATGAATAATAATGTTGCTGCTAATCAACTTGATCGACTTCCAAGCCAAAACAAAGGATCACGCCGGGTGGCGTTCTCCGATTCCCTTCCTAAACACCGACCTACATCCAACGATAGTAACTCTGAGCATTGCAACAAATGTTGTTGTCCTCGTTTATTTGCTTGTTGCGCTTGGATTTGTCTTGGGGTTTTCGGAATTGTTGTTGCCATTCTTATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGAACTTGTCCAAATTCGAGATTGGAAATTCCACAAATCAGAATAATGTTGTGTTAAATGCAAAAGTAGATATGTCAATCGAGATGAGGAACAAGAACGAAAAAATAGAGTTGAGTTATAGCAATATTGTGGTGAATTTGGCGTCAGAAGATGTGAAATTGGGAAGGAGTGTGATTCCCGGTTTCTCTCACGATCCTGGAAATACCACATACTTTAATGTAACTATGAATGTTGTGGGAGATTCCACAGATAAAGACAATGTATTGCAACTAGAAGATGATCGAAAAAGGGTGCAAATGAATGTGCATGTGACAATGGAGGCTACAGTTGATTTTCATGTTGGGATATTCAAATTGAACAAGGTGCCAATCCATGTAGCATGTGATTTTCGACAGTTCCTTCTTTTATATCGAATAAACGAGCCCCCATGTAATATTAGAATGTTTCCCAACCTCAGGTAA

Coding sequence (CDS)

ATGAATAATAATGTTGCTGCTAATCAACTTGATCGACTTCCAAGCCAAAACAAAGGATCACGCCGGGTGGCGTTCTCCGATTCCCTTCCTAAACACCGACCTACATCCAACGATAGTAACTCTGAGCATTGCAACAAATGTTGTTGTCCTCGTTTATTTGCTTGTTGCGCTTGGATTTGTCTTGGGGTTTTCGGAATTGTTGTTGCCATTCTTATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGAACTTGTCCAAATTCGAGATTGGAAATTCCACAAATCAGAATAATGTTGTGTTAAATGCAAAAGTAGATATGTCAATCGAGATGAGGAACAAGAACGAAAAAATAGAGTTGAGTTATAGCAATATTGTGGTGAATTTGGCGTCAGAAGATGTGAAATTGGGAAGGAGTGTGATTCCCGGTTTCTCTCACGATCCTGGAAATACCACATACTTTAATGTAACTATGAATGTTGTGGGAGATTCCACAGATAAAGACAATGTATTGCAACTAGAAGATGATCGAAAAAGGGTGCAAATGAATGTGCATGTGACAATGGAGGCTACAGTTGATTTTCATGTTGGGATATTCAAATTGAACAAGGTGCCAATCCATGTAGCATGTGATTTTCGACAGTTCCTTCTTTTATATCGAATAAACGAGCCCCCATGTAATATTAGAATGTTTCCCAACCTCAGGTAA

Protein sequence

MNNNVAANQLDRLPSQNKGSRRVAFSDSLPKHRPTSNDSNSEHCNKCCCPRLFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGNSTNQNNVVLNAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIPGFSHDPGNTTYFNVTMNVVGDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPCNIRMFPNLR

Homology

[Close]

BLAST of Cla008093 vs. TrEMBL
Match: I1LLZ0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G199600 PE=4 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.8e-29
Identity = 80/250 (32.00%), Postives = 140/250 (56.00%), Query Frame = 1


Query: 1   MNNNVAANQLDRLPSQNKG-SRRVAFSDSLPKHRPTSND---SNSEHCNK-----CCCPR 60
           M    + + L + PS+++  SRRVA     P+H  ++     S+ +H +K     CC   
Sbjct: 1   MEEGKSKSTLAKNPSRSRNPSRRVALDVPSPRHMGSTLSGIHSSIDHLDKGRYHPCC--- 60

Query: 61  LFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGNSTNQNNVVL 120
            FACCAW CL VF +++AIL LG+ +++FL+SG+P+I VR  N++KF++ + + +    +
Sbjct: 61  -FACCAWSCLIVFILIIAILFLGITYLAFLKSGMPKINVRAFNITKFQVDDGSQK----M 120

Query: 121 NAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIPGFSHDPGNTTYFNVTMNVV 180
           N+ + + +   NKN+K++L Y  + V++ SEDV LG+    GFS  P N T  ++TM + 
Sbjct: 121 NSVIGLGLIFSNKNDKLKLLYGPLDVDVTSEDVLLGKKKQGGFSQKPLNVTNLDMTMTLE 180

Query: 181 GDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRI 240
               DK    +L+ D K  +M   + +   + F VG  ++N VP   +C+  +   +   
Sbjct: 181 NADVDKYAAEELKSDIKAYEMVFDLYVGGHIGFQVGKLQMNNVPFLASCNQIKREDVDFG 240

Query: 241 NEPPCNIRMF 242
            +P C +++F
Sbjct: 241 RKPECEVKLF 242

[Close]

BLAST of Cla008093 vs. TrEMBL
Match: W9RIU1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018810 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 80/246 (32.52%), Postives = 133/246 (54.07%), Query Frame = 1


Query: 1   MNNNVAANQLDRLP--SQNKGSRRVAFSDSLPKH-RPTSNDSNSEHCNKCCCPRLFACCA 60
           M ++  A  L R P  +Q+  +R V FSD  PKH RPT    N ++C   C     + CA
Sbjct: 1   MADSRPAPPLPRPPHRTQSTRTRHVCFSDLPPKHNRPTLPLHNGKNCRPFC----LSLCA 60

Query: 61  WICLGVFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGN-STNQNNVVLNAKVD 120
           W CL +F +V+ +L++G++F SFL + LP+I VR L  ++ E+ N  + +    +NA ++
Sbjct: 61  WACLSIFALVLLVLLVGILFASFLHTALPDIAVRGLKFARLEVQNPKSGKLTGSINANLE 120

Query: 121 MSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIPGFSHDPGNTTYFNVTMNVVGDSTD 180
           + +E  N+NEKI +S+  + V  +SE + LG + I  FS  P NTT   V+  V     D
Sbjct: 121 LLVEFSNQNEKIAVSFGRLEVEASSERINLGETEIGAFSQRPRNTTELRVSTAVEKPGVD 180

Query: 181 KDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPC 240
            ++  ++  D    +    VT+   V FH+G   ++ VP+ ++C+  Q   +    +  C
Sbjct: 181 GEDAEEMVSDLNDSEAVFDVTLRGNVGFHIGGIDIDGVPVLISCN-PQKTEVDHGKKSRC 240

Query: 241 NIRMFP 243
           + R+FP
Sbjct: 241 SARIFP 241

[Close]

BLAST of Cla008093 vs. TrEMBL
Match: A0A0B2QY59_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_029792 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 69/208 (33.17%), Postives = 120/208 (57.69%), Query Frame = 1


Query: 39  SNSEHCNK-----CCCPRLFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEITVRML 98
           S+ +H +K     CC    FACCAW CL VF +++AIL LG+ +++FL+SG+P+I VR  
Sbjct: 10  SSIDHLDKGRYHPCC----FACCAWSCLIVFILIIAILFLGITYLAFLKSGMPKINVRAF 69

Query: 99  NLSKFEIGNSTNQNNVVLNAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIPG 158
           N++KF++ + + +    +N+ + + +   NKN+K++L Y  + V++ SEDV LG+    G
Sbjct: 70  NITKFQVDDGSQK----MNSVIGLGLIFSNKNDKLKLLYGPLDVDVTSEDVLLGKKKQGG 129

Query: 159 FSHDPGNTTYFNVTMNVVGDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNK 218
           FS  P N T  ++TM +     DK    +L+ D K  +M   + +   + F VG  ++N 
Sbjct: 130 FSQKPLNVTNLDMTMTLENADVDKYAAEELKSDIKAYEMVFDLYVGGHIGFQVGKLQMNN 189

Query: 219 VPIHVACDFRQFLLLYRINEPPCNIRMF 242
           VP   +C+  +   +    +P C +++F
Sbjct: 190 VPFLASCNQIKREDVDFGRKPECEVKLF 209

[Close]

BLAST of Cla008093 vs. TrEMBL
Match: A0A0B2QBL9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_033757 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 68/213 (31.92%), Postives = 120/213 (56.34%), Query Frame = 1


Query: 34  PTSNDSNSEHCNK-----CCCPRLFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEI 93
           P    S+ +H +K     CCC   FACCAW CL +F +++AIL LG+ +++FL+SG+P++
Sbjct: 25  PHGLHSSIDHLDKGRYLPCCC---FACCAWSCLIMFLLIIAILFLGITYLAFLKSGMPKV 84

Query: 94  TVRMLNLSKFEIGNSTNQNNVVLNAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGR 153
            VR  N++K ++ + + +    +NA + + +   NKN+K++L Y  + V++ SEDV LG+
Sbjct: 85  NVRAFNITKLQVDDGSQK----MNAVIGLGLIFSNKNDKLKLLYGPLDVDVTSEDVLLGK 144

Query: 154 SVIPGFSHDPGNTTYFNVTMNVVGDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGI 213
             + GF  +P N T  ++TM +     DK     L  D K  +M   + +   + F VG 
Sbjct: 145 KKLGGFYQNPLNDTQLDMTMTLENADVDKYAAEDLISDIKAYEMVFDLYVGGHIGFQVGK 204

Query: 214 FKLNKVPIHVACDFRQFLLLYRINEPPCNIRMF 242
            ++N VP   +C   +   +    +P C++++F
Sbjct: 205 LQMNNVPFLASCHQIKREDVDFGRKPECDVKLF 230

[Close]

BLAST of Cla008093 vs. TrEMBL
Match: K7MQ17_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G051200 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 68/213 (31.92%), Postives = 120/213 (56.34%), Query Frame = 1


Query: 34  PTSNDSNSEHCNK-----CCCPRLFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEI 93
           P    S+ +H +K     CCC   FACCAW CL +F +++AIL LG+ +++FL+SG+P++
Sbjct: 25  PHGLHSSIDHLDKGRYLPCCC---FACCAWSCLIMFLLIIAILFLGITYLAFLKSGMPKV 84

Query: 94  TVRMLNLSKFEIGNSTNQNNVVLNAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGR 153
            VR  N++K ++ + + +    +NA + + +   NKN+K++L Y  + V++ SEDV LG+
Sbjct: 85  NVRAFNITKLQVDDGSQK----MNAVIGLGLIFSNKNDKLKLLYGPLDVDVTSEDVLLGK 144

Query: 154 SVIPGFSHDPGNTTYFNVTMNVVGDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGI 213
             + GF  +P N T  ++TM +     DK     L  D K  +M   + +   + F VG 
Sbjct: 145 KKLGGFYQNPLNDTQLDMTMTLENADVDKYAAEDLISDIKAYEMVFDLYVGGHIGFQVGK 204

Query: 214 FKLNKVPIHVACDFRQFLLLYRINEPPCNIRMF 242
            ++N VP   +C   +   +    +P C++++F
Sbjct: 205 LQMNNVPFLASCHQIKREDVDFGRKPECDVKLF 230

[Close]

BLAST of Cla008093 vs. NCBI nr
Match: gi|659115440|ref|XP_008457557.1| (PREDICTED: uncharacterized protein LOC103497223 [Cucumis melo])

HSP 1 Score: 399.8 bits (1026), Expect = 3.4e-108
Identity = 201/245 (82.04%), Postives = 215/245 (87.76%), Query Frame = 1


Query: 3   NNVAANQLDRLPSQNKGSRRVAFSDSLPKHRPTSNDSNSEHCNKCCCPRLFACCAWICLG 62
           NN+ AN+LDRLPSQNKGSRRVAFSDSLPKHR    D NSE  NKCC PRLFACCAWIC+G
Sbjct: 2   NNIGANRLDRLPSQNKGSRRVAFSDSLPKHRAAFGDGNSERHNKCC-PRLFACCAWICVG 61

Query: 63  VFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGNSTNQN--NVVLNAKVDMSIE 122
           +FGIVVAILILGVIF+SFLQSGLPEITVRMLNLS FEI NSTNQN  N +LNAK+DMSIE
Sbjct: 62  IFGIVVAILILGVIFVSFLQSGLPEITVRMLNLSNFEIKNSTNQNDNNALLNAKLDMSIE 121

Query: 123 MRNKNEKIELSYSNIVVNLASEDVKLGRSVIPGFSHDPGNTTYFNVTMNVVGDSTDKDNV 182
           MRNKNEKIELSYS+IVVNL SEDVKLGRSVIP FSH PGNTTY NVTMNV   STDKDN+
Sbjct: 122 MRNKNEKIELSYSSIVVNLVSEDVKLGRSVIPSFSHSPGNTTYLNVTMNVERVSTDKDNL 181

Query: 183 LQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPCNIRM 242
            QLEDDRK+VQM+V V MEA V FHVGIF L  VPIHVACDF+Q LL+YRINEPPCNIRM
Sbjct: 182 SQLEDDRKKVQMDVQVKMEAKVGFHVGIFNLKNVPIHVACDFQQTLLVYRINEPPCNIRM 241

Query: 243 FPNLR 246
           FPN+R
Sbjct: 242 FPNIR 245

[Close]

BLAST of Cla008093 vs. NCBI nr
Match: gi|571489665|ref|XP_006591267.1| (PREDICTED: uncharacterized protein LOC102666272 [Glycine max])

HSP 1 Score: 137.1 bits (344), Expect = 4.1e-29
Identity = 80/250 (32.00%), Postives = 140/250 (56.00%), Query Frame = 1


Query: 1   MNNNVAANQLDRLPSQNKG-SRRVAFSDSLPKHRPTSND---SNSEHCNK-----CCCPR 60
           M    + + L + PS+++  SRRVA     P+H  ++     S+ +H +K     CC   
Sbjct: 1   MEEGKSKSTLAKNPSRSRNPSRRVALDVPSPRHMGSTLSGIHSSIDHLDKGRYHPCC--- 60

Query: 61  LFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGNSTNQNNVVL 120
            FACCAW CL VF +++AIL LG+ +++FL+SG+P+I VR  N++KF++ + + +    +
Sbjct: 61  -FACCAWSCLIVFILIIAILFLGITYLAFLKSGMPKINVRAFNITKFQVDDGSQK----M 120

Query: 121 NAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIPGFSHDPGNTTYFNVTMNVV 180
           N+ + + +   NKN+K++L Y  + V++ SEDV LG+    GFS  P N T  ++TM + 
Sbjct: 121 NSVIGLGLIFSNKNDKLKLLYGPLDVDVTSEDVLLGKKKQGGFSQKPLNVTNLDMTMTLE 180

Query: 181 GDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRI 240
               DK    +L+ D K  +M   + +   + F VG  ++N VP   +C+  +   +   
Sbjct: 181 NADVDKYAAEELKSDIKAYEMVFDLYVGGHIGFQVGKLQMNNVPFLASCNQIKREDVDFG 240

Query: 241 NEPPCNIRMF 242
            +P C +++F
Sbjct: 241 RKPECEVKLF 242

[Close]

BLAST of Cla008093 vs. NCBI nr
Match: gi|502129663|ref|XP_004500386.1| (PREDICTED: uncharacterized protein LOC101510711 [Cicer arietinum])

HSP 1 Score: 136.0 bits (341), Expect = 9.1e-29
Identity = 74/238 (31.09%), Postives = 127/238 (53.36%), Query Frame = 1


Query: 15  SQNKGSRRVAFSDSLPKHRPTSN-----------DSNSEHCNKCCCPRLFACCAWICLGV 74
           S  K  RRVAF      H P ++           D + EH + CC     ACCAW CL +
Sbjct: 18  SWQKSGRRVAFEVPSNHHHPNNSPSLNDIDTSIYDFDREHYHPCC----LACCAWSCLVM 77

Query: 75  FGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGNSTNQNNVVLNAKVDMSIEMRN 134
           F  V+  L+ G+ +++FLQ+G+P++ VR  N+ KF++ NS+      ++A + + +   N
Sbjct: 78  FIFVITFLVFGISYLAFLQAGMPKVNVRTFNIIKFQVDNSSQN----MDASISLGLRFSN 137

Query: 135 KNEKIELSYSNIVVNLASEDVKLGRSVIPGFSHDPGNTTYFNVTMNVVGDSTDKDNVLQL 194
           KNE+++L Y  + +++ S+ V LG++ + GFS  P N T  ++TM +   S +K +  +L
Sbjct: 138 KNEELKLLYGPLFLDVTSDGVLLGKTKLNGFSQMPRNDTDLDMTMTMNHASVNKYDADEL 197

Query: 195 EDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPCNIRMF 242
           + D    +M   V +   +  H+G  K+  VP   +C+  + + +     P CNI+MF
Sbjct: 198 KSDIMANEMVFDVFVSGNIGVHIGSLKMINVPFLTSCEQIKRMDVDFGRRPGCNIKMF 247

[Close]

BLAST of Cla008093 vs. NCBI nr
Match: gi|703091762|ref|XP_010094440.1| (hypothetical protein L484_018810 [Morus notabilis])

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28
Identity = 80/246 (32.52%), Postives = 133/246 (54.07%), Query Frame = 1


Query: 1   MNNNVAANQLDRLP--SQNKGSRRVAFSDSLPKH-RPTSNDSNSEHCNKCCCPRLFACCA 60
           M ++  A  L R P  +Q+  +R V FSD  PKH RPT    N ++C   C     + CA
Sbjct: 1   MADSRPAPPLPRPPHRTQSTRTRHVCFSDLPPKHNRPTLPLHNGKNCRPFC----LSLCA 60

Query: 61  WICLGVFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGN-STNQNNVVLNAKVD 120
           W CL +F +V+ +L++G++F SFL + LP+I VR L  ++ E+ N  + +    +NA ++
Sbjct: 61  WACLSIFALVLLVLLVGILFASFLHTALPDIAVRGLKFARLEVQNPKSGKLTGSINANLE 120

Query: 121 MSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIPGFSHDPGNTTYFNVTMNVVGDSTD 180
           + +E  N+NEKI +S+  + V  +SE + LG + I  FS  P NTT   V+  V     D
Sbjct: 121 LLVEFSNQNEKIAVSFGRLEVEASSERINLGETEIGAFSQRPRNTTELRVSTAVEKPGVD 180

Query: 181 KDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPC 240
            ++  ++  D    +    VT+   V FH+G   ++ VP+ ++C+  Q   +    +  C
Sbjct: 181 GEDAEEMVSDLNDSEAVFDVTLRGNVGFHIGGIDIDGVPVLISCN-PQKTEVDHGKKSRC 240

Query: 241 NIRMFP 243
           + R+FP
Sbjct: 241 SARIFP 241

[Close]

BLAST of Cla008093 vs. NCBI nr
Match: gi|470119820|ref|XP_004296008.1| (PREDICTED: uncharacterized protein LOC101299461 [Fragaria vesca subsp. vesca])

HSP 1 Score: 133.3 bits (334), Expect = 5.9e-28
Identity = 78/237 (32.91%), Postives = 123/237 (51.90%), Query Frame = 1


Query: 15  SQNKGSRRVAFSDSLPKHRPTSN----------DSNSEHCNKCCCPRLFACCAWICLGVF 74
           S    +R VAFS++     P++N          D + E   K   PR +ACCAW C+ +F
Sbjct: 22  SSRASARHVAFSET--SAAPSTNRDDGAFFPPPDLDGER-PKRLRPRAYACCAWGCMFIF 81

Query: 75  GIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGNSTNQNNVVLNAKVDMSIEMRNK 134
             V+  LILG +F+S   S LP I VR  N +K E G   NQ+ V L  KVD+ +E+ N+
Sbjct: 82  AFVLLALILGFVFVSIFHSYLPVIRVRRFNATKIEFGKPNNQHKVSLKGKVDLLVEINNQ 141

Query: 135 NEKIELSYSNIVVNLASEDVKLGRSVIPGFSHDPGNTTYFNVTMNVVGDSTDKDNVLQLE 194
           NEK EL +    V+ ++ ++ LG +    F+    ++   N T+ V     DKD+  QL+
Sbjct: 142 NEKTELKFGMFKVSASTSNLNLGNTEFKAFTQPTKSSKSLNTTIGVNNSGVDKDDAEQLK 201

Query: 195 DDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPCNIRMF 242
            D +  +  + + M  +V F +    +N++PI  +CD +Q  + +  N   CN R+F
Sbjct: 202 QDIQNHEFELQLNMVGSVSFPISGINMNQIPIIASCDCKQTEVDFGKN-ARCNYRIF 254

The following BLAST results are available for this feature:

BLAST of Cla008093 vs. TrEMBL


Match Name	E-value	Identity	Description
I1LLZ0_SOYBN	2.8e-29	32.00	Uncharacterized protein OS=Glycine max GN=GLYMA_11G199600 PE=4 SV=2	[more]
W9RIU1_9ROSA	1.1e-28	32.52	Uncharacterized protein OS=Morus notabilis GN=L484_018810 PE=4 SV=1	[more]
A0A0B2QY59_GLYSO	1.0e-26	33.17	Uncharacterized protein OS=Glycine soja GN=glysoja_029792 PE=4 SV=1	[more]
A0A0B2QBL9_GLYSO	1.7e-26	31.92	Uncharacterized protein OS=Glycine soja GN=glysoja_033757 PE=4 SV=1	[more]
K7MQ17_SOYBN	1.7e-26	31.92	Uncharacterized protein OS=Glycine max GN=GLYMA_18G051200 PE=4 SV=1	[more]

BLAST of Cla008093 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115440\|ref\|XP_008457557.1\|	3.4e-108	82.04	PREDICTED: uncharacterized protein LOC103497223 [Cucumis melo]	[more]
gi\|571489665\|ref\|XP_006591267.1\|	4.1e-29	32.00	PREDICTED: uncharacterized protein LOC102666272 [Glycine max]	[more]
gi\|502129663\|ref\|XP_004500386.1\|	9.1e-29	31.09	PREDICTED: uncharacterized protein LOC101510711 [Cicer arietinum]	[more]
gi\|703091762\|ref\|XP_010094440.1\|	1.6e-28	32.52	hypothetical protein L484_018810 [Morus notabilis]	[more]
gi\|470119820\|ref\|XP_004296008.1\|	5.9e-28	32.91	PREDICTED: uncharacterized protein LOC101299461 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla008093	Cla008093.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 119..220 score: 1.5
None	No IPR available	PANTHER	PTHR31234	FAMILY NOT NAMED	coord: 51..242 score: 5.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla008093	Cla97C03G050810	Watermelon (97103) v2	wmwmbB124
Cla008093	MELO3C020481	Melon (DHL92) v3.5.1	mewmB146
Cla008093	ClCG03G000030	Watermelon (Charleston Gray)	wcgwmB223
Cla008093	MELO3C020481.2	Melon (DHL92) v3.6.1	medwmB143

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla008093	Cucurbita maxima (Rimu)	cmawmB185
Cla008093	Cucurbita maxima (Rimu)	cmawmB429
Cla008093	Cucurbita moschata (Rifu)	cmowmB173
Cla008093	Cucurbita moschata (Rifu)	cmowmB422
Cla008093	Cucumber (Chinese Long) v2	cuwmB026
Cla008093	Cucurbita pepo (Zucchini)	cpewmB507
Cla008093	Bottle gourd (USVL1VR-Ls)	lsiwmB185
Cla008093	Silver-seed gourd	carwmB0210
Cla008093	Silver-seed gourd	carwmB0515
Cla008093	Wax gourd	wgowmB471