Cla007981 (gene) Watermelon (97103) v1

Overview
NameCla007981
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRetrotransposon protein (AHRD V1 ***- E5GCB5_CUCME)
LocationChr8 : 5579190 .. 5579953 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGTAATAGTAAGCGGACTAAGCACGTATGGACCCAGGTGGAGGACGCTAAGTTGGTGGAAGCCTTACTATATTTGGTAGAGACTGGTTGGAGGTCGGACAATGGGACGTTTCGACTTGGATACTTGCAAAACTTGGAGCGAATTATGCATGAGATGGTGCTTGGGTGCAAGGTGAGGACTCTTAAGAAACAATACAATGCAGTATCAGAGATGTTATGTCAATCAGGATTTGGTTGGAACGAGGAGTTCAAATGTGTCCAGGTTGAGAGGGAGACTTTCAATATCTGGGTTCGGGTAAGATTCTTGGAAACAGAATATACCGATACATCTTAAATATGTAAATATTAATAATCTGTATGTGTATAAATGCGAGTCATCCCAGCGCAAAGGGGATGTGGAACAAGTCGTTCCCCCATTACGATGACCTCTCCATCGTCTTCAGGAGAGATAGAGCTGTAGGACAATCGAGTGAGGGCCCACACGTAATGGTGAGTAATGCATTCAGAGAGTTTGAAGATGAGATTCGACTTGGATCGCAAGACTGTCCCACACTTGATGTTCGCCAAATAGATTCATCATCAAATCCGGATGGAATGAATGAAGATACAACAGACCAATCTACAGGTAAAGCGACACCTGCAGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCCATTGTTCCAAGCTGAAATGATCGACATCATGAGAGTGACTGTTGAGATGCAGAACACGCACATGAGTAGACTTGCATCTTGGTAG

mRNA sequence

ATGGCAGGTAATAGTAAGCGGACTAAGCACGTATGGACCCAGGTGGAGGACGCTAAGTTGGTGGAAGCCTTACTATATTTGGTAGAGACTGGTTGGAGGTCGGACAATGGGACGTTTCGACTTGGATACTTGCAAAACTTGGAGCGAATTATGCATGAGATGGTGCTTGGGTGCAAGGTGAGGACTCTTAAGAAACAATACAATGCAGTATCAGAGATGTTATGTCAATCAGGATTTGGTTGGAACGAGGAGTTCAAATGTGTCCAGGTTGAGAGGGAGACTTTCAATATCTGGGTTCGGGGGATGTGGAACAAGTCGTTCCCCCATTACGATGACCTCTCCATCGTCTTCAGGAGAGATAGAGCTGTAGGACAATCGAGTGAGGGCCCACACGTAATGGTGAGTAATGCATTCAGAGAGTTTGAAGATGAGATTCGACTTGGATCGCAAGACTGTCCCACACTTGATGTTCGCCAAATAGATTCATCATCAAATCCGGATGGAATGAATGAAGATACAACAGACCAATCTACAGGTAAAGCGACACCTGCAGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCCATTGTTCCAAGCTGAAATGATCGACATCATGAGAGTGACTGTTGAGATGCAGAACACGCACATGAGTAGACTTGCATCTTGGTAG

Coding sequence (CDS)

ATGGCAGGTAATAGTAAGCGGACTAAGCACGTATGGACCCAGGTGGAGGACGCTAAGTTGGTGGAAGCCTTACTATATTTGGTAGAGACTGGTTGGAGGTCGGACAATGGGACGTTTCGACTTGGATACTTGCAAAACTTGGAGCGAATTATGCATGAGATGGTGCTTGGGTGCAAGGTGAGGACTCTTAAGAAACAATACAATGCAGTATCAGAGATGTTATGTCAATCAGGATTTGGTTGGAACGAGGAGTTCAAATGTGTCCAGGTTGAGAGGGAGACTTTCAATATCTGGGTTCGGGGGATGTGGAACAAGTCGTTCCCCCATTACGATGACCTCTCCATCGTCTTCAGGAGAGATAGAGCTGTAGGACAATCGAGTGAGGGCCCACACGTAATGGTGAGTAATGCATTCAGAGAGTTTGAAGATGAGATTCGACTTGGATCGCAAGACTGTCCCACACTTGATGTTCGCCAAATAGATTCATCATCAAATCCGGATGGAATGAATGAAGATACAACAGACCAATCTACAGGTAAAGCGACACCTGCAGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCCATTGTTCCAAGCTGAAATGATCGACATCATGAGAGTGACTGTTGAGATGCAGAACACGCACATGAGTAGACTTGCATCTTGGTAG

Protein sequence

MAGNSKRTKHVWTQVEDAKLVEALLYLVETGWRSDNGTFRLGYLQNLERIMHEMVLGCKVRTLKKQYNAVSEMLCQSGFGWNEEFKCVQVERETFNIWVRGMWNKSFPHYDDLSIVFRRDRAVGQSSEGPHVMVSNAFREFEDEIRLGSQDCPTLDVRQIDSSSNPDGMNEDTTDQSTGKATPAESSRGSKRKRPLFQAEMIDIMRVTVEMQNTHMSRLASW
Homology
[Close]
BLAST of Cla007981 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-33
Identity = 94/249 (37.75%), Postives = 133/249 (53.41%), Query Frame = 1 

Query: 1   MAGNSKRTKHVWTQVEDAKLVEALLYLVETG-WRSDNGTFRLGYLQNLERIM-------- 60
           M  +S+  KH WT+ E+A LVE L+ LV  G WRSDNGTFR GYL  L R+M        
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  -HEMVLGCKVRTLKKQYNAVSEMLCQ--SGFGWNEEFKCVQVERETFNIW----VRGMWN 120
            H   +  +++ +K+ ++A++EM     SGFGWN+E KC+  E+E F+ W     +G+ N
Sbjct: 416 IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 475

Query: 121 KSFPHYDDLSIVFRRDRAVGQSSEGPHVMVSNAFREFEDEIRLGSQDCPTLDVRQIDSSS 180
           KSF HYD+LS VF +DRA G  +E            F D   +GS D P  D    D+  
Sbjct: 476 KSFVHYDELSYVFGKDRATGGRAE-----------SFAD---IGSNDPPGYDAGAADAMP 535

Query: 181 NPD-------GMN---EDTTDQSTGKATPAES-SRGSKRKRPLFQAEMIDIMRVTVEMQN 223
           + D       G+N   +D  +  T + +   + S GSKRKRP    +  DI+R  +E  N
Sbjct: 536 DTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGN 590

[Close]
BLAST of Cla007981 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.9e-25
Identity = 77/213 (36.15%), Postives = 117/213 (54.93%), Query Frame = 1 

Query: 31  GWRSDNGTFRLGYLQNLERIMHEMVLGCKVR----------TLKKQYNAVSEML--CQSG 90
           GW+SDNGTFR GYL  L R+M E + GC+VR          TLK+ + A++EML    SG
Sbjct: 349 GWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSG 408

Query: 91  FGWNEEFKCVQVERETFNIWVR------GMWNKSFPHYDDLSIVFRRDRAVGQSSEGPHV 150
           FGWN+E KC+  E+E F+ WVR      G+ N  FP+YD+L+ VF RDRA G+ +E    
Sbjct: 409 FGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFAD 468

Query: 151 MVSNAFREFEDEIRL--GSQDCPTLDVRQIDSSSNPDGMNEDTTDQSTGKATPAES-SRG 210
           + SN      D   +  G++D P +  R +D       + +D       +A+  ++ S G
Sbjct: 469 VGSNEPGGGYDRFDMGDGNEDFPPVYSRGVDI------LQDDVRASRPSRASEGKTGSSG 528

Query: 211 SKRKRPLFQAEMIDIMRVTVEMQNTHMSRLASW 223
           SKRKR   +   ++ + + ++  N  + ++A W
Sbjct: 529 SKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEW 555

[Close]
BLAST of Cla007981 vs. TrEMBL
Match: A0A072UYX1_MEDTR (Myb/SANT-like DNA-binding domain protein OS=Medicago truncatula GN=MTR_3g075160 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.3e-24
Identity = 73/212 (34.43%), Postives = 109/212 (51.42%), Query Frame = 1 

Query: 4   NSKRTKHVWTQVEDAKLVEALLYLVETGWRSDNGTFRLGYLQNLERIMHEMVLGC----- 63
           N+K TK  WT  EDA LV+ LL LV+ GW++D GTF+ GY + LER + + +  C     
Sbjct: 9   NAKGTKRQWTTEEDAVLVQGLLQLVDDGWKADAGTFKPGYTKVLERYLLKKIPDCTLKAN 68

Query: 64  -----KVRTLKKQYNAVSEML--CQSGFGWNEEFKCVQVERETFNIWVR------GMWNK 123
                +V+ LK  Y+A+ +ML    SGFGWN+  K + VE+E +  W +      G++ K
Sbjct: 69  PHIESRVKRLKSHYSAIRDMLGPSASGFGWNDATKTIVVEKEVYRQWCKSHPNATGLFGK 128

Query: 124 SFPHYDDLSIVFRRDRAVGQSSEGP---------HVMVSNAFREFEDEIRLGSQ------ 182
            FPHY+ L  VF +D+A G +SE P             S+   EF+ ++ LG +      
Sbjct: 129 PFPHYERLHNVFGKDKACGDTSEDPADHAYNIVKEFFPSSPRNEFDIDLNLGEENFESQI 188

[Close]
BLAST of Cla007981 vs. TrEMBL
Match: M5WLM1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022346mg PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-22
Identity = 67/153 (43.79%), Postives = 92/153 (60.13%), Query Frame = 1 

Query: 2   AGNSKRTKHVWTQVEDAKLVEALLYLVETG-WRSDNGTFRLGYLQNLERIMHEMVLGCK- 61
           A  +++ KH+WT +EDA LVEAL  L   G W+ DNG FR GYL  LE+ M + + GC  
Sbjct: 171 ARRNRKDKHIWTPIEDAFLVEALNELCVGGCWKVDNG-FRSGYLGQLEKAMEQKLPGCGL 230

Query: 62  ---------VRTLKKQYNAVSEMLC-QSGFGWNEEFKCVQVERETFNIWV------RGMW 121
                    V+TLKKQ  A+S+ML   SGF WN+E K V  E++ F+ WV      +G+ 
Sbjct: 231 KVVPHIDSCVKTLKKQTLAISDMLTNSSGFAWNDEEKMVVCEKQVFDDWVKVHNSAKGLR 290

Query: 122 NKSFPHYDDLSIVFRRDRAVGQSSEGPHVMVSN 137
           NK FPH+D L   F +DRA G+ +EGP  ++ +
Sbjct: 291 NKPFPHHDTLVEAFGKDRANGKGAEGPAEVIED 322

[Close]
BLAST of Cla007981 vs. TrEMBL
Match: A0A0A9TMG5_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-22
Identity = 61/147 (41.50%), Postives = 94/147 (63.95%), Query Frame = 1 

Query: 3   GNSKRTKHVWTQVEDAKLVEALLYLVETG-WRSDNGTFRLGYLQNLERIMHEMVLGC--- 62
           G +K  KH W+Q ED  LV  L+ L++ G W+++NG F  GYL  LE+ +HE +  C   
Sbjct: 11  GLNKNPKHQWSQHEDEHLVHCLVRLIQEGSWKAENG-FCTGYLAQLEKWLHERIPTCEFK 70

Query: 63  -------KVRTLKKQYNAVSEMLCQS--GFGWNEEFKCVQVERETFNIWV------RGMW 122
                  +++TLK+Q++A++EML  S  GFGWN++ KC+  +++ F+ WV      RG+ 
Sbjct: 71  GNPHIDSRLKTLKRQFHAITEMLEPSAGGFGWNDKDKCIVCDKDIFDNWVKGHPSARGLS 130

Query: 123 NKSFPHYDDLSIVFRRDRAVGQSSEGP 131
           NK FP+ + LSIVF +DRA G+++E P
Sbjct: 131 NKPFPYLEKLSIVFVKDRATGEAAESP 156

[Close]
BLAST of Cla007981 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 4.1e-36
Identity = 99/244 (40.57%), Postives = 139/244 (56.97%), Query Frame = 1 

Query: 1   MAGNSKRTKHVWTQVEDAKLVEALLYLVETG-WRSDNGTFRLGYLQNLERIMHEMVLG-- 60
           MA  S+  KH WT+ E+ K VE L+ LV +G WRSDNGTF+ GYL  L+R+M E + G  
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  --------CKVRTLKKQYNAVSEMLCQS--GFGWNEEFKCVQVERETFNIWVR------G 120
                   C V++LKK Y+A++EM   S  GFGWNEEF+C+  ER+ F+ W++      G
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 MWNKSFPHYDDLSIVFRRDRAVGQSSEGPHVMVSNAFREFEDEIRLG---SQDCPTLDVR 180
           + +KSFP+YDDLS VF +DRA G  SE    + SN    F D I LG    +D PT+  +
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 QIDSSSNPDGMNEDTTDQSTGKATPAESSRGSKRKRPLFQAEMIDIMRVTVEMQNTHMSR 223
            +  S  PD M      Q++ +      S  SKRKR   + E ++++R  +E  N  +  
Sbjct: 181 GVHMS--PDEMFGIRAGQASER---RNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKA 239

[Close]
BLAST of Cla007981 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 150.6 bits (379), Expect = 3.2e-33
Identity = 94/249 (37.75%), Postives = 133/249 (53.41%), Query Frame = 1 

Query: 1   MAGNSKRTKHVWTQVEDAKLVEALLYLVETG-WRSDNGTFRLGYLQNLERIM-------- 60
           M  +S+  KH WT+ E+A LVE L+ LV  G WRSDNGTFR GYL  L R+M        
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  -HEMVLGCKVRTLKKQYNAVSEMLCQ--SGFGWNEEFKCVQVERETFNIW----VRGMWN 120
            H   +  +++ +K+ ++A++EM     SGFGWN+E KC+  E+E F+ W     +G+ N
Sbjct: 416 IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 475

Query: 121 KSFPHYDDLSIVFRRDRAVGQSSEGPHVMVSNAFREFEDEIRLGSQDCPTLDVRQIDSSS 180
           KSF HYD+LS VF +DRA G  +E            F D   +GS D P  D    D+  
Sbjct: 476 KSFVHYDELSYVFGKDRATGGRAE-----------SFAD---IGSNDPPGYDAGAADAMP 535

Query: 181 NPD-------GMN---EDTTDQSTGKATPAES-SRGSKRKRPLFQAEMIDIMRVTVEMQN 223
           + D       G+N   +D  +  T + +   + S GSKRKRP    +  DI+R  +E  N
Sbjct: 536 DTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGN 590

[Close]
BLAST of Cla007981 vs. NCBI nr
Match: gi|659126986|ref|XP_008463462.1| (PREDICTED: uncharacterized protein LOC103501629 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-29
Identity = 90/250 (36.00%), Postives = 132/250 (52.80%), Query Frame = 1 

Query: 1   MAGNSKRTKHVWTQVEDAKLVEALLYLVET-GWRSDNGTFRLGYLQNLERIMHEMVLGC- 60
           M  +S+ +KH WT+ E+A LVE L+ LV   GWRSDNGTFR  YL  L R+M   + GC 
Sbjct: 342 MTSSSRLSKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPEYLNQLARMMAFKIPGCN 401

Query: 61  --------KVRTLKKQYNAVSEML---CQSGFGWNEEFKCVQVERETFNIW----VRGMW 120
                   +++ +K+ ++A++EM    C S FGWN+E KC+  E+E F+ W     +G+ 
Sbjct: 402 IHASTIDSRIKLMKRMFHALAEMRGPNCNS-FGWNDEKKCIVAEKEVFDDWSHPTAKGLL 461

Query: 121 NKSFPHYDDLSIVFRRDRAVGQSSEGPHVMVSNAFREFEDEIRLGSQDCPTLDVRQIDSS 180
           NKSF HYD+LS VF +DRA G  +E            F D   +GS      D    D++
Sbjct: 462 NKSFVHYDELSYVFGKDRATGGRAE-----------SFAD---IGSNHPAGYDAFPADAA 521

Query: 181 SNPD-------GMN---EDTTDQSTGKATPAES-SRGSKRKRPLFQAEMIDIMRVTVEMQ 223
            + D       G+N   +D  +  T + +   + S GSKRK P    +  DI+R  ++  
Sbjct: 522 PDTDFPPMYSLGLNMSADDLMETRTARVSERRNVSSGSKRKHPGHATDSGDIVRTAIKYG 576

[Close]
BLAST of Cla007981 vs. NCBI nr
Match: gi|1012110960|ref|XP_015959963.1| (PREDICTED: uncharacterized protein LOC107483869 [Arachis duranensis])

HSP 1 Score: 136.3 bits (342), Expect = 6.3e-29
Identity = 86/233 (36.91%), Postives = 125/233 (53.65%), Query Frame = 1 

Query: 4   NSKRTKHVWTQVEDAKLVEALLYLVETGWRSDNGTFRLGYLQNLERIMHEMVLGC----- 63
           NSK+TK  WT  EDAKLVE L+ L  T W+ DNGTF+ GY ++LE+++HE + GC     
Sbjct: 8   NSKQTKRQWTPHEDAKLVECLVELATTSWKCDNGTFKSGYGKHLEKMLHEKIPGCDLKAN 67

Query: 64  -----KVRTLKKQYNAVSEML--CQSGFGWNEEFKCVQVERETFNIW------VRGMWNK 123
                +V+ LK+QY A+ EM+    SGFGWN++ K + VER+ FN W        G++NK
Sbjct: 68  PHIESRVKLLKRQYFAIVEMMGTAGSGFGWNDKDKMIVVERQIFNEWKSSHPNANGLYNK 127

Query: 124 SFPHYDDLSIVFRRDRAVGQSSEGPHVMVSNAFREFEDEIRLGSQ---DCPTLDVRQIDS 183
            FPH+++L I F RDRA G ++E  +V  + A  E E E  L  +   +   +++ + + 
Sbjct: 128 PFPHFEELGIAFGRDRAQGGNAE--NVTQAVATMEAEREATLSDRLVNENTQVNLEETEM 187

Query: 184 SSNPDGMNEDT----------TDQSTGKATPAESSRGSKRKRPLFQAEMIDIM 206
               D     T             S+  A  A     +KRKR     E+IDI+
Sbjct: 188 EYEADSQEPPTPGVPVAPGASAAPSSSAAPSASYIERNKRKRGSKSEEVIDIV 238

[Close]
BLAST of Cla007981 vs. NCBI nr
Match: gi|672109629|ref|XP_008791120.1| (PREDICTED: uncharacterized protein LOC103708116 [Phoenix dactylifera])

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 81/199 (40.70%), Postives = 116/199 (58.29%), Query Frame = 1 

Query: 2   AGNSKRTKHVWTQVEDAKLVEALLYLVE-TGWRSDNGTFRLGYLQNLERIMHEMVLGC-- 61
           A  +   K +WT+ EDAKLVE L+ +V  +GW+ DNGTFR G+ Q+LER+M + + GC  
Sbjct: 232 ADKTTSLKRIWTKTEDAKLVECLIEVVNASGWKGDNGTFRPGFHQHLERMMEKKLPGCGL 291

Query: 62  --------KVRTLKKQYNAVSEMLCQS--GFGWNEEFKCVQVERETFNIWVR------GM 121
                    V+ LKKQYNA++E+L  +  GFGWN+  KCV  +++ +++WV+      G+
Sbjct: 292 RGNPHIENYVKLLKKQYNAIAEILGPNCLGFGWNDREKCVVADKDVYDLWVKSHPHATGL 351

Query: 122 WNKSFPHYDDLSIVFRRDRAVGQSSEGPHVMVSNAFREFE---DEIRLG-SQDCPTLDVR 175
            NK FP+Y+DLSI+F +DRA G+ +E P        +E E   D I LG   D       
Sbjct: 352 RNKPFPYYEDLSIMFGKDRANGEGAEDPADACEQIEKEEEALGDTISLGDDMDAKEGSPN 411

The following BLAST results are available for this feature:
BLAST of Cla007981 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB5_CUCME2.3e-3337.75Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBB2_CUCME3.9e-2536.15Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A072UYX1_MEDTR7.3e-2434.43Myb/SANT-like DNA-binding domain protein OS=Medicago truncatula GN=MTR_3g075160 ... [more]
M5WLM1_PRUPE2.3e-2243.79Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022346mg PE=4 S... [more]
A0A0A9TMG5_ARUDO2.3e-2241.50Uncharacterized protein OS=Arundo donax PE=4 SV=1[more]
BLAST of Cla007981 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082641|ref|XP_008441954.1|4.1e-3640.57PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|307136287|gb|ADN34114.1|3.2e-3337.75retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659126986|ref|XP_008463462.1|1.7e-2936.00PREDICTED: uncharacterized protein LOC103501629 [Cucumis melo][more]
gi|1012110960|ref|XP_015959963.1|6.3e-2936.91PREDICTED: uncharacterized protein LOC107483869 [Arachis duranensis][more]
gi|672109629|ref|XP_008791120.1|1.4e-2840.70PREDICTED: uncharacterized protein LOC103708116 [Phoenix dactylifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024752Myb/SANT-like_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla007981Cla007981.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 12..93
score: 8.
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 7..213
score: 1.5
NoneNo IPR availablePANTHERPTHR31704:SF16SUBFAMILY NOT NAMEDcoord: 7..213
score: 1.5