Cla007632 (gene) Watermelon (97103) v1

NameCla007632
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr6 : 8606991 .. 8607356 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGAGTAACATCAAAAACACTGAGACAAAGCAAGCTAGCGCAACTCTGCCAAAAAAACGAACAAAGGATGGCTTCGATCCAAAGGCATATAGGCTACTGGCAAAGGCAGGTTATGATTTCAAGGCTCATACTAAGTTTAAAACTCTAAAAATATCTGATGAAAGACCGAAACTCTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGGTATGTTATCCCTTATTTAAGGGCCGGACTTGGATATAATCCCCCGGAGCCAATTCGTATAACCAGAAAAGGAAAAGCAAATATTACAAATACATGTCACATTACTGTGGAAGAAAGCAATGACTCTAAAGAAGACAAGAGGAGTGAAGGTTAG

mRNA sequence

ATGGATAAGAGTAACATCAAAAACACTGAGACAAAGCAAGCTAGCGCAACTCTGCCAAAAAAACGAACAAAGGATGGCTTCGATCCAAAGGCATATAGGCTACTGGCAAAGGCAGGTTATGATTTCAAGGCTCATACTAAGTTTAAAACTCTAAAAATATCTGATGAAAGACCGAAACTCTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGGTATGTTATCCCTTATTTAAGGGCCGGACTTGGATATAATCCCCCGGAGCCAATTCGTATAACCAGAAAAGGAAAAGCAAATATTACAAATACATGTCACATTACTGTGGAAGAAAGCAATGACTCTAAAGAAGACAAGAGGAGTGAAGGTTAG

Coding sequence (CDS)

ATGGATAAGAGTAACATCAAAAACACTGAGACAAAGCAAGCTAGCGCAACTCTGCCAAAAAAACGAACAAAGGATGGCTTCGATCCAAAGGCATATAGGCTACTGGCAAAGGCAGGTTATGATTTCAAGGCTCATACTAAGTTTAAAACTCTAAAAATATCTGATGAAAGACCGAAACTCTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGGTATGTTATCCCTTATTTAAGGGCCGGACTTGGATATAATCCCCCGGAGCCAATTCGTATAACCAGAAAAGGAAAAGCAAATATTACAAATACATGTCACATTACTGTGGAAGAAAGCAATGACTCTAAAGAAGACAAGAGGAGTGAAGGTTAG

Protein sequence

MDKSNIKNTETKQASATLPKKRTKDGFDPKAYRLLAKAGYDFKAHTKFKTLKISDERPKLSPTQRKLQKEGYVIPYLRAGLGYNPPEPIRITRKGKANITNTCHITVEESNDSKEDKRSEG
BLAST of Cla007632 vs. TrEMBL
Match: A5C5C0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007094 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-13
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 1

Query: 3   KSNIKNTETKQASATLPKKRTKDGFDPKAYRLLAKAGYDFKAHTKFKTLKISDERPK--- 62
           + +IK+   +      P K+  +GF+PKAY+LLAKAGYDF + ++   L       K   
Sbjct: 241 QKSIKSLRDQTKKELFPIKKIDEGFNPKAYKLLAKAGYDFISSSQLGELSPETTGXKMHG 300

Query: 63  LSPTQRKLQKEGYVIPYLRAGLGYNPPEPIRITRKGKANITNTCHITVEESNDS 114
           L+ TQRKL+++GY + +   GLG+ P EPI+I+ K K    +T HI VE  ++S
Sbjct: 301 LNETQRKLKQQGYAVKHSMEGLGFIPFEPIKISTKTKKTKASTQHIIVEYMDES 354

BLAST of Cla007632 vs. TrEMBL
Match: M1DD60_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400036673 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06
Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 1

Query: 18  LPKKRTKDGFDPKAYRLLAKAGYDFKAHTKFKTLKISDERPKLSPTQRKLQKEGYVIPYL 77
           LP KRT++GFDP AYRLLAKAG+D    +K   L          P++  ++++       
Sbjct: 234 LPMKRTEEGFDPNAYRLLAKAGFDPNEPSKMGKL----------PSEPAMRQQ------- 293

Query: 78  RAGLGYNPPEPIRITRKGKANITNTCHITVEESNDSKEDKRS 120
           R GLGY  P PIRI+ K  +N     +ITVE+ + +   + S
Sbjct: 294 REGLGYKQPPPIRISIKRVSN----NYITVEDESTNSNKRPS 314

BLAST of Cla007632 vs. TrEMBL
Match: A0A0J8CB77_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g111360 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 1

Query: 13  QASATLPKKRTKDGFDPKAYRLLAKAGYDFKAHTKFKTLKISDERPKLSPTQRKLQKEGY 72
           + S+  P  R K+GFDP AY+L+  +GYDF        + I  +   LS TQ+ LQK+G 
Sbjct: 59  EKSSETPSAR-KEGFDPVAYKLMENSGYDFSNPEPMGKV-IEAKAYGLSKTQQNLQKQGE 118

Query: 73  VIPYLRAGLGYNPPEPIRITRKGKANITNTCHITVEESNDSK 115
            +   + GLG+   +P+RIT + +  I  T +I VEE  +S+
Sbjct: 119 RVFVKKVGLGFTESKPVRITAR-RRPIQATQYIAVEELEESE 157

BLAST of Cla007632 vs. NCBI nr
Match: gi|659124357|ref|XP_008462116.1| (PREDICTED: uncharacterized protein LOC103500544 [Cucumis melo])

HSP 1 Score: 152.1 bits (383), Expect = 6.1e-34
Identity = 70/112 (62.50%), Postives = 86/112 (76.79%), Query Frame = 1

Query: 10  ETKQASATLPKKRTKDGFDPKAYRLLAKAGYDFKAHTKFKTLKISDERPKLSPTQRKLQK 69
           E     A LP++RT +GFDPKAY+L+AKAGYDF   T+ K++KI DERP+LSPTQ+KLQK
Sbjct: 517 EKNDLEAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQK 576

Query: 70  EGYVIPYLRAGLGYNPPEPIRITRKGKANITNTCHITVEESNDSKEDKRSEG 122
           +GY IP  +AG+GY   EP+RIT KGK  + NTCHITVEES DSKE K+  G
Sbjct: 577 QGYSIPNSKAGIGYQSSEPVRITGKGKTKVANTCHITVEESKDSKEGKKDRG 628

BLAST of Cla007632 vs. NCBI nr
Match: gi|778660504|ref|XP_011656345.1| (PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 8.5e-28
Identity = 62/98 (63.27%), Postives = 80/98 (81.63%), Query Frame = 1

Query: 16  ATLPKKRTKDGFDPKAYRLLAKAGYDFKAHTKFKTLKISDERPKLSPTQRKLQKEGYVIP 75
           A LP++RTKDGFDPKAY+L+AKAGYDF AHT+FK+L+I D RP+LS TQ+KL +EG+ IP
Sbjct: 485 ANLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEIHD-RPELSSTQKKLLREGHSIP 544

Query: 76  YLRAGLGYNPPEPIRITRKGKANITNTCHITVEESNDS 114
             R GLGY  PEPIRIT+KGK  + +  HIT+EE +++
Sbjct: 545 VSRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNT 581

BLAST of Cla007632 vs. NCBI nr
Match: gi|147841566|emb|CAN70901.1| (hypothetical protein VITISV_007094 [Vitis vinifera])

HSP 1 Score: 82.4 bits (202), Expect = 5.9e-13
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 1

Query: 3   KSNIKNTETKQASATLPKKRTKDGFDPKAYRLLAKAGYDFKAHTKFKTLKISDERPK--- 62
           + +IK+   +      P K+  +GF+PKAY+LLAKAGYDF + ++   L       K   
Sbjct: 241 QKSIKSLRDQTKKELFPIKKIDEGFNPKAYKLLAKAGYDFISSSQLGELSPETTGXKMHG 300

Query: 63  LSPTQRKLQKEGYVIPYLRAGLGYNPPEPIRITRKGKANITNTCHITVEESNDS 114
           L+ TQRKL+++GY + +   GLG+ P EPI+I+ K K    +T HI VE  ++S
Sbjct: 301 LNETQRKLKQQGYAVKHSMEGLGFIPFEPIKISTKTKKTKASTQHIIVEYMDES 354

BLAST of Cla007632 vs. NCBI nr
Match: gi|698536889|ref|XP_009764655.1| (PREDICTED: uncharacterized protein LOC104216337 [Nicotiana sylvestris])

HSP 1 Score: 70.1 bits (170), Expect = 3.0e-09
Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 1

Query: 11  TKQASATLPKKRTKDGFDPKAYRLLAKAGYDFKAHTKFKTLK---ISDERPKLSPTQRKL 70
           +K A   L   + K  +DPKA+ LL K+GYDF   ++   LK      +  +L+ +Q KL
Sbjct: 3   SKSAKGNLQADKIKGHYDPKAFILLEKSGYDFSNPSRLGKLKDEVTGKKIHRLNESQMKL 62

Query: 71  QKEGYVIPYLRAGLGYNPPEPIRITRKGKANITNTCHITVEESNDSKEDK 118
           +K+G+ I  L+ GLG+   EP+RI+ K    I ++ H  VEE  + K  K
Sbjct: 63  RKQGHYIATLKFGLGFGLAEPLRISSKRSKEIASSQHTLVEEIKEVKGKK 112

BLAST of Cla007632 vs. NCBI nr
Match: gi|848874799|ref|XP_012837904.1| (PREDICTED: uncharacterized protein LOC105958447 [Erythranthe guttata])

HSP 1 Score: 68.6 bits (166), Expect = 8.8e-09
Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 1

Query: 24  KDGFDPKAYRLLAKAGYDFKAHTKFKTLK---ISDERPKLSPTQRKLQKEGYVIPYLRAG 83
           ++ +DPK+Y LLAK+GY+F   ++   LK     ++   L+ TQR L+K+G+ +   R G
Sbjct: 859 REAYDPKSYNLLAKSGYNFSNPSRLGELKPELTGEKIHGLNETQRTLRKQGFRVNQPRVG 918

Query: 84  LGYNPPEPIRITRKGKANITNTCHITVEESNDSKE 116
           LG+ P EP+RI    K    N  HIT++   + K+
Sbjct: 919 LGFTPIEPVRIRVSRKGECPNVHHITIKGVGNQKK 953

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A5C5C0_VITVI4.1e-1339.47Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007094 PE=4 SV=1[more]
M1DD60_SOLTU1.7e-0638.24Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400036673 PE=4 SV=1[more]
A0A0J8CB77_BETVU1.7e-0637.25Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g111360 PE=4 S... [more]
Match NameE-valueIdentityDescription
gi|659124357|ref|XP_008462116.1|6.1e-3462.50PREDICTED: uncharacterized protein LOC103500544 [Cucumis melo][more]
gi|778660504|ref|XP_011656345.1|8.5e-2863.27PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus][more]
gi|147841566|emb|CAN70901.1|5.9e-1339.47hypothetical protein VITISV_007094 [Vitis vinifera][more]
gi|698536889|ref|XP_009764655.1|3.0e-0936.36PREDICTED: uncharacterized protein LOC104216337 [Nicotiana sylvestris][more]
gi|848874799|ref|XP_012837904.1|8.8e-0936.84PREDICTED: uncharacterized protein LOC105958447 [Erythranthe guttata][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla007632Cla007632.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla007632Cucumber (Gy14) v2cgybwmB163
Cla007632Cucumber (Gy14) v2cgybwmB260
Cla007632Cucumber (Gy14) v2cgybwmB262
Cla007632Melon (DHL92) v3.6.1medwmB384
Cla007632Melon (DHL92) v3.6.1medwmB418
Cla007632Melon (DHL92) v3.6.1medwmB474
Cla007632Silver-seed gourdcarwmB0219
Cla007632Silver-seed gourdcarwmB0224
Cla007632Silver-seed gourdcarwmB0785
Cla007632Silver-seed gourdcarwmB0962
Cla007632Silver-seed gourdcarwmB1077
Cla007632Cucumber (Chinese Long) v3cucwmB184
Cla007632Cucumber (Chinese Long) v3cucwmB286
Cla007632Cucumber (Chinese Long) v3cucwmB288
Cla007632Watermelon (97103) v2wmwmbB402
Cla007632Watermelon (97103) v2wmwmbB406
Cla007632Watermelon (97103) v2wmwmbB413
Cla007632Wax gourdwgowmB097
Cla007632Wax gourdwgowmB106
Cla007632Wax gourdwgowmB288
Cla007632Watermelon (97103) v1wmwmB116
Cla007632Watermelon (97103) v1wmwmB138
Cla007632Cucumber (Gy14) v1cgywmB249
Cla007632Cucumber (Gy14) v1cgywmB483
Cla007632Cucumber (Gy14) v1cgywmB691
Cla007632Cucurbita maxima (Rimu)cmawmB250
Cla007632Cucurbita maxima (Rimu)cmawmB358
Cla007632Cucurbita maxima (Rimu)cmawmB611
Cla007632Cucurbita maxima (Rimu)cmawmB811
Cla007632Cucurbita maxima (Rimu)cmawmB878
Cla007632Cucurbita moschata (Rifu)cmowmB239
Cla007632Cucurbita moschata (Rifu)cmowmB353
Cla007632Cucurbita moschata (Rifu)cmowmB604
Cla007632Cucurbita moschata (Rifu)cmowmB802
Cla007632Cucurbita moschata (Rifu)cmowmB867
Cla007632Melon (DHL92) v3.5.1mewmB486
Cla007632Melon (DHL92) v3.5.1mewmB390
Cla007632Melon (DHL92) v3.5.1mewmB430
Cla007632Watermelon (Charleston Gray)wcgwmB311
Cla007632Watermelon (Charleston Gray)wcgwmB344
Cla007632Watermelon (Charleston Gray)wcgwmB395
Cla007632Cucumber (Chinese Long) v2cuwmB172
Cla007632Cucumber (Chinese Long) v2cuwmB277
Cla007632Cucumber (Chinese Long) v2cuwmB279
Cla007632Cucurbita pepo (Zucchini)cpewmB161
Cla007632Cucurbita pepo (Zucchini)cpewmB334
Cla007632Cucurbita pepo (Zucchini)cpewmB622
Cla007632Cucurbita pepo (Zucchini)cpewmB752
Cla007632Cucurbita pepo (Zucchini)cpewmB853
Cla007632Bottle gourd (USVL1VR-Ls)lsiwmB040
Cla007632Bottle gourd (USVL1VR-Ls)lsiwmB382
Cla007632Bottle gourd (USVL1VR-Ls)lsiwmB383