Cla007402 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007402
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ubiquitin family protein (AHRD V1 -- D7MTI3_ARALL)
Location	Chr5 : 22742250 .. 22743368 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGTGTTGGTATACTTGGATTTGTAACCATTTTTCTTTTCAATAATGCAGGAAGTCTACCAAGGTTTGAACTGCCCACCAATCCTCAAGAATTGCAAACTACTGAATCTTTGGGTATTGTTTTGCGAAATGCACAACGACTCCTAAGTGATTATGCTATATCTTCACTACCTGTGAGTGTTATATATATTTGTTTGTTATTTTTTGGTTTAATAATTGTAGGGTAGATAACTAATGTTTGCTTTGATTACCTTTATCAAACCTTTCTTATTCTGCTTTTTCAAAAGATACAAATCATATAGGGTTAAACAAGCTTTTCCTACAATTAAATTTCAAATCATATAGGGGTATTTGGATCGCATATGTTGTTTCATGGGTATAGATTTTTTATTTTTTATTTTTATTCAAAAAAAAAAAAAAAAAAATATGTAGCGTATTGCTGAGCGATTCGAGCAAGATGGGTCTTCAACTGATCCGACGGTGAGGGGTCAAATCCAAGAAGAGTTAGTTCAAGTAGGCCTTAGAATGCAACATTTTGGAGCGCTTCTTCTGGATCTGGGGAGTTCAATCTTGACGCTTCGTTTGGAACAATCAACTGTAAGTTTGTTTTTAATTCAGTTTTAGTCCAAAATCGAGGGTGGCCATAGAATGAGTGAAATGTCCATATCCCACGTGTTTTATTTAGATTGATCTCCAAGATGTTGCTCTAAGGGTTGTATCAAGCAATTGTCCAATGGATGTGTTTCGTGCTATGGTAGAGAGTTCAGCTCGAATTTCTGGGAGTAGTACTGATGATATTGCTAATGAATTGTGCACCCATCACACTCTTGCTCAGGTACAATTTCCTTTTATTCTTCCATTTAATTTATGTACATTAGTTTGAGATTAAAAAGACAATTTCAAATGTGATAAACCTATGGGATATTCTTTTAAAATCAAATGGTGGGAATTTTCAATTATTACAAAGTTGGTTGATTTAGTTAGTTTTTGTATTAGGACGTTGTTTATGAATTTTTATTATTATTATTATTATTTTTCTTTGGTAGGAATATTTAGAGATGTTAGCAAGTGATATAAACCGACGTCTTCAAAGCAATTCAGAACAGGGAAATTAA

mRNA sequence

ATGAGTTGTGTTGGTATACTTGGATTTGTAACCATTTTTCTTTTCAATAATGCAGGAAGTCTACCAAGGTTTGAACTGCCCACCAATCCTCAAGAATTGCAAACTACTGAATCTTTGGGTATTGTTTTGCGAAATGCACAACGACTCCTAAGTGATTATGCTATATCTTCACTACCTCGTATTGCTGAGCGATTCGAGCAAGATGGGTCTTCAACTGATCCGACGGTGAGGGGTCAAATCCAAGAAGAGTTAGTTCAAGTAGGCCTTAGAATGCAACATTTTGGAGCGCTTCTTCTGGATCTGGGGAGTTCAATCTTGACGCTTCGTTTGGAACAATCAACTATTGATCTCCAAGATGTTGCTCTAAGGGTTGTATCAAGCAATTGTCCAATGGATGTGTTTCGTGCTATGGTAGAGAGTTCAGCTCGAATTTCTGGGAGTAGTACTGATGATATTGCTAATGAATTGTGCACCCATCACACTCTTGCTCAGGAATATTTAGAGATGTTAGCAAGTGATATAAACCGACGTCTTCAAAGCAATTCAGAACAGGGAAATTAA

Coding sequence (CDS)

ATGAGTTGTGTTGGTATACTTGGATTTGTAACCATTTTTCTTTTCAATAATGCAGGAAGTCTACCAAGGTTTGAACTGCCCACCAATCCTCAAGAATTGCAAACTACTGAATCTTTGGGTATTGTTTTGCGAAATGCACAACGACTCCTAAGTGATTATGCTATATCTTCACTACCTCGTATTGCTGAGCGATTCGAGCAAGATGGGTCTTCAACTGATCCGACGGTGAGGGGTCAAATCCAAGAAGAGTTAGTTCAAGTAGGCCTTAGAATGCAACATTTTGGAGCGCTTCTTCTGGATCTGGGGAGTTCAATCTTGACGCTTCGTTTGGAACAATCAACTATTGATCTCCAAGATGTTGCTCTAAGGGTTGTATCAAGCAATTGTCCAATGGATGTGTTTCGTGCTATGGTAGAGAGTTCAGCTCGAATTTCTGGGAGTAGTACTGATGATATTGCTAATGAATTGTGCACCCATCACACTCTTGCTCAGGAATATTTAGAGATGTTAGCAAGTGATATAAACCGACGTCTTCAAAGCAATTCAGAACAGGGAAATTAA

Protein sequence

MSCVGILGFVTIFLFNNAGSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQGN

Homology

[Close]

BLAST of Cla007402 vs. TrEMBL
Match: A0A0A0L4G3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653430 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-70
Identity = 140/166 (84.34%), Postives = 154/166 (92.77%), Query Frame = 1


Query: 19  GSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRG 78
           G  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRG
Sbjct: 14  GGAPRFELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAERFEQDGSSSDPNVRG 73

Query: 79  QIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMV 138
           QIQEELVQVGLRMQ FGALLLDLGSSILTLR+EQST+DLQD+A RVVS+NCPMDVFRA+V
Sbjct: 74  QIQEELVQVGLRMQQFGALLLDLGSSILTLRMEQSTVDLQDLAERVVSTNCPMDVFRAVV 133

Query: 139 ESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ 185
           ESSARISGSS  DIAN LCTH +LA+EYLE+LA+DI+RRL+SNSEQ
Sbjct: 134 ESSARISGSSAHDIANHLCTHDSLAEEYLEILATDISRRLESNSEQ 179

[Close]

BLAST of Cla007402 vs. TrEMBL
Match: A0A0A0L194_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653440 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32
Identity = 77/100 (77.00%), Postives = 85/100 (85.00%), Query Frame = 1


Query: 17  NAGSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTV 76
           N G L R ELPTNPQ L TTESL IVLR+AQRLLSDYAISSL RIAER EQ+ SSTDPTV
Sbjct: 269 NGGDLTRVELPTNPQGLPTTESLSIVLRHAQRLLSDYAISSLSRIAERLEQNSSSTDPTV 328

Query: 77  RGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSTID 117
           RGQIQEE VQVGLRMQ FG+LLL+LG +ILTLR+ QS ++
Sbjct: 329 RGQIQEESVQVGLRMQQFGSLLLELGRTILTLRMGQSPVE 368

[Close]

BLAST of Cla007402 vs. TrEMBL
Match: A0A0A0L194_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653440 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-18
Identity = 48/70 (68.57%), Postives = 61/70 (87.14%), Query Frame = 1


Query: 115 IDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDI 174
           ID QD+A R+ S+N P DVFRA+VESSAR+SGSS++DIANELC+   LA+EY+EML+SD+
Sbjct: 857 IDSQDLARRITSTNSPRDVFRAVVESSARLSGSSSEDIANELCSDERLAKEYVEMLSSDV 916

Query: 175 NRRLQSNSEQ 185
           NRRLQ NS+Q
Sbjct: 917 NRRLQGNSDQ 926

HSP 2 Score: 119.0 bits (297), Expect = 6.1e-24
Identity = 59/97 (60.82%), Postives = 76/97 (78.35%), Query Frame = 1


Query: 17  NAGSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTV 76
           N G +PR  LP+N Q + T E+LGIVLR+A+RLLS +A+S+L  IA R EQ+G+S+DP+V
Sbjct: 271 NTGDVPRVNLPSNAQGMPTPEALGIVLRHAERLLSSHAVSALSHIAGRLEQEGASSDPSV 330

Query: 77  RGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQS 114
           RGQIQ E +QVGL MQH GAL L+LG +I TLR+ QS
Sbjct: 331 RGQIQTEFMQVGLAMQHLGALFLELGRTIWTLRMGQS 367

[Close]

BLAST of Cla007402 vs. TrEMBL
Match: M5Y431_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000989mg PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-07
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 1


Query: 115 IDLQDVALRVVSSNCPMDVFRAMVESSARISG--SSTDDIANELCTHHTLAQEYLEMLAS 174
           I+LQ+V  R+ + N P DVF A+VE+S  +SG  S   ++ +ELC    L++EY+E+L  
Sbjct: 865 INLQEVVQRIGNLNAPGDVFHAVVENSVELSGRGSGPQELVDELCRDDGLSREYVEILRR 924

Query: 175 DINRRLQSNSEQ 185
           DI RRL+ NS Q
Sbjct: 925 DIRRRLEGNSGQ 936

HSP 2 Score: 117.1 bits (292), Expect = 2.3e-23
Identity = 61/92 (66.30%), Postives = 70/92 (76.09%), Query Frame = 1


Query: 22  PRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQ 81
           PR ELP N +   T E+L IVLRNAQ LLS   +SSL  IA R EQDG+S+DPT+R QIQ
Sbjct: 283 PREELPRNRRGASTPEALAIVLRNAQHLLSGLGVSSLSHIARRLEQDGTSSDPTIRAQIQ 342

Query: 82  EELVQVGLRMQHFGALLLDLGSSILTLRLEQS 114
            E VQVGL MQHFGALLL+LG +ILTLR+ QS
Sbjct: 343 TEAVQVGLAMQHFGALLLELGRTILTLRMAQS 374

[Close]

BLAST of Cla007402 vs. TrEMBL
Match: R0EUR7_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10025849mg PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-05
Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 1


Query: 110 LEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEM 169
           L+   +++Q +A  +  S+ P DVFRAMVE++A     S DD+ NELC    L+QEY E+
Sbjct: 842 LQPLQVNVQSMAQMIEHSDPPEDVFRAMVENAA----VSQDDLVNELCCDEVLSQEYAEL 901

Query: 170 LASDINRRLQSN 182
           L  DI  RL+ +
Sbjct: 902 LRRDIEGRLKDD 909

HSP 2 Score: 117.1 bits (292), Expect = 2.3e-23
Identity = 61/92 (66.30%), Postives = 70/92 (76.09%), Query Frame = 1


Query: 22  PRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQ 81
           PR ELP N +   T E+L IVLRNAQ LLS   +SSL  IA R EQDG+S+DPT+R QIQ
Sbjct: 287 PREELPRNRRGASTPEALAIVLRNAQHLLSGLGVSSLSHIARRLEQDGTSSDPTIRAQIQ 346

Query: 82  EELVQVGLRMQHFGALLLDLGSSILTLRLEQS 114
            E VQVGL MQHFGALLL+LG +ILTLR+ QS
Sbjct: 347 TEAVQVGLAMQHFGALLLELGRTILTLRMAQS 378

[Close]

BLAST of Cla007402 vs. NCBI nr
Match: gi|659104389|ref|XP_008452929.1| (PREDICTED: uncharacterized protein LOC103493795 isoform X1 [Cucumis melo])

HSP 1 Score: 281.6 bits (719), Expect = 1.0e-72
Identity = 146/173 (84.39%), Postives = 157/173 (90.75%), Query Frame = 1


Query: 12  IFLFNNAGSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSS 71
           I +  N G  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS
Sbjct: 8   ISISQNGGGAPRFELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAERFEQDGSS 67

Query: 72  TDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSTIDLQDVALRVVSSNCPM 131
           +DP VRGQIQEELVQVGLRMQ FGALLLDLGSSILTLRLEQST+DLQD+A RVVS+NCPM
Sbjct: 68  SDPDVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLRLEQSTVDLQDLAERVVSTNCPM 127

Query: 132 DVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ 185
           DVFRA+VESSARISGSST DIAN LCTH +LA+EYLE+LASDI RRLQSNSEQ
Sbjct: 128 DVFRAVVESSARISGSSTHDIANHLCTHDSLAEEYLEILASDITRRLQSNSEQ 180

[Close]

BLAST of Cla007402 vs. NCBI nr
Match: gi|659104393|ref|XP_008452932.1| (PREDICTED: uncharacterized protein LOC103493795 isoform X2 [Cucumis melo])

HSP 1 Score: 278.5 bits (711), Expect = 8.6e-72
Identity = 144/166 (86.75%), Postives = 154/166 (92.77%), Query Frame = 1


Query: 19  GSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRG 78
           G  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRG
Sbjct: 14  GGAPRFELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAERFEQDGSSSDPDVRG 73

Query: 79  QIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMV 138
           QIQEELVQVGLRMQ FGALLLDLGSSILTLRLEQST+DLQD+A RVVS+NCPMDVFRA+V
Sbjct: 74  QIQEELVQVGLRMQQFGALLLDLGSSILTLRLEQSTVDLQDLAERVVSTNCPMDVFRAVV 133

Query: 139 ESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ 185
           ESSARISGSST DIAN LCTH +LA+EYLE+LASDI RRLQSNSEQ
Sbjct: 134 ESSARISGSSTHDIANHLCTHDSLAEEYLEILASDITRRLQSNSEQ 179

[Close]

BLAST of Cla007402 vs. NCBI nr
Match: gi|778697104|ref|XP_011654258.1| (PREDICTED: uncharacterized protein LOC101215937 isoform X1 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-71
Identity = 142/173 (82.08%), Postives = 157/173 (90.75%), Query Frame = 1


Query: 12  IFLFNNAGSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSS 71
           I +  N G  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS
Sbjct: 8   ISISQNGGGAPRFELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAERFEQDGSS 67

Query: 72  TDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSTIDLQDVALRVVSSNCPM 131
           +DP VRGQIQEELVQVGLRMQ FGALLLDLGSSILTLR+EQST+DLQD+A RVVS+NCPM
Sbjct: 68  SDPNVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLRMEQSTVDLQDLAERVVSTNCPM 127

Query: 132 DVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ 185
           DVFRA+VESSARISGSS  DIAN LCTH +LA+EYLE+LA+DI+RRL+SNSEQ
Sbjct: 128 DVFRAVVESSARISGSSAHDIANHLCTHDSLAEEYLEILATDISRRLESNSEQ 180

[Close]

BLAST of Cla007402 vs. NCBI nr
Match: gi|778697108|ref|XP_011654259.1| (PREDICTED: uncharacterized protein LOC101215937 isoform X2 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 1.6e-70
Identity = 140/166 (84.34%), Postives = 154/166 (92.77%), Query Frame = 1


Query: 19  GSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRG 78
           G  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRG
Sbjct: 14  GGAPRFELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAERFEQDGSSSDPNVRG 73

Query: 79  QIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMV 138
           QIQEELVQVGLRMQ FGALLLDLGSSILTLR+EQST+DLQD+A RVVS+NCPMDVFRA+V
Sbjct: 74  QIQEELVQVGLRMQQFGALLLDLGSSILTLRMEQSTVDLQDLAERVVSTNCPMDVFRAVV 133

Query: 139 ESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ 185
           ESSARISGSS  DIAN LCTH +LA+EYLE+LA+DI+RRL+SNSEQ
Sbjct: 134 ESSARISGSSAHDIANHLCTHDSLAEEYLEILATDISRRLESNSEQ 179

[Close]

BLAST of Cla007402 vs. NCBI nr
Match: gi|659104397|ref|XP_008452934.1| (PREDICTED: mucin-19 isoform X1 [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 2.3e-32
Identity = 78/97 (80.41%), Postives = 83/97 (85.57%), Query Frame = 1


Query: 17  NAGSLPRFELPTNPQELQTTESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTV 76
           N G L R ELPTNPQ L TTESL IVLR+AQRLLSDYAISSL RIAER EQD SSTDPTV
Sbjct: 269 NGGDLTRVELPTNPQGLPTTESLSIVLRHAQRLLSDYAISSLSRIAERLEQDSSSTDPTV 328

Query: 77  RGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQS 114
           RGQIQEE VQVGLRMQ FG+LLL+LG +ILTLR+ QS
Sbjct: 329 RGQIQEESVQVGLRMQQFGSLLLELGRTILTLRMGQS 365

The following BLAST results are available for this feature:

BLAST of Cla007402 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4G3_CUCSA	1.1e-70	84.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653430 PE=4 SV=1	[more]
A0A0A0L194_CUCSA	2.1e-32	77.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653440 PE=4 SV=1	[more]
A0A0A0L194_CUCSA	1.7e-18	68.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653440 PE=4 SV=1	[more]
M5Y431_PRUPE	3.0e-07	45.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000989mg PE=4 SV=1	[more]
R0EUR7_9BRAS	2.2e-05	43.06	Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10025849mg PE=4...	[more]

BLAST of Cla007402 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104389\|ref\|XP_008452929.1\|	1.0e-72	84.39	PREDICTED: uncharacterized protein LOC103493795 isoform X1 [Cucumis melo]	[more]
gi\|659104393\|ref\|XP_008452932.1\|	8.6e-72	86.75	PREDICTED: uncharacterized protein LOC103493795 isoform X2 [Cucumis melo]	[more]
gi\|778697104\|ref\|XP_011654258.1\|	1.9e-71	82.08	PREDICTED: uncharacterized protein LOC101215937 isoform X1 [Cucumis sativus]	[more]
gi\|778697108\|ref\|XP_011654259.1\|	1.6e-70	84.34	PREDICTED: uncharacterized protein LOC101215937 isoform X2 [Cucumis sativus]	[more]
gi\|659104397\|ref\|XP_008452934.1\|	2.3e-32	80.41	PREDICTED: mucin-19 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla007402	Cla007402.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15204	SCYTHE/BAT3	coord: 16..113 score: 2.3
None	No IPR available	PANTHER	PTHR15204:SF1	SUBFAMILY NOT NAMED	coord: 16..113 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla007402	CmaCh09G000700	Cucurbita maxima (Rimu)	cmawmB029
Cla007402	CmoCh01G020590	Cucurbita moschata (Rifu)	cmowmB437

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla007402	Cucumber (Gy14) v2	cgybwmB299
Cla007402	Melon (DHL92) v3.6.1	medwmB509
Cla007402	Silver-seed gourd	carwmB0103
Cla007402	Silver-seed gourd	carwmB0349
Cla007402	Cucumber (Chinese Long) v3	cucwmB337
Cla007402	Watermelon (97103) v2	wmwmbB207
Cla007402	Wax gourd	wgowmB620
Cla007402	Cucumber (Gy14) v1	cgywmB499
Cla007402	Cucurbita maxima (Rimu)	cmawmB444
Cla007402	Cucurbita moschata (Rifu)	cmowmB021
Cla007402	Melon (DHL92) v3.5.1	mewmB524
Cla007402	Watermelon (Charleston Gray)	wcgwmB285
Cla007402	Cucumber (Chinese Long) v2	cuwmB324
Cla007402	Cucurbita pepo (Zucchini)	cpewmB563
Cla007402	Cucurbita pepo (Zucchini)	cpewmB768
Cla007402	Bottle gourd (USVL1VR-Ls)	lsiwmB319