Cla007282 (gene) Watermelon (97103) v1

NameCla007282
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr7 : 6269925 .. 6272355 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTTTTTGCTACCTTCAATCGCTTTCACCTCCATTTTCGTCTCACCCAACAATACCCATGTCCCCATGTTTCAAACTCATTTCCTCTTTTCACTGCAGCTGCTCATCGTCTTCCTCTTCTTTCCCATTTACAGAGAAACACTCCGTCAAGAGATACAAAAAGACAATTGGTTGTACAAGAACCAATCGGACCAAACTTCTATTACTTCATCGTGTTCGATCTATTCTGTATGATTTTGAGTCCATACAGCAGAATGACATTGCCTTGCAATTGCAAAAGCTCAAGAAATTGTTGCAAATATTGAGGGAAAAGAAGCTAAGTAGTGGAAAATGTGGGTCTAAGAATGTAATTTAAAATATGAAGTCGATAGGTTTTAAAATGTGGGTCTGGGAATGTAAATTTCTCCTGAAAATTTCTGGTGAGAGTCCCCCCACCGCAACTCACTTGCAAAGGAAAGGCATAAATGGGGAAGCGGAAGACTAGAGAATTGAAAAATGTTAGAATTAGGCAAATGATAGTGAAATGGTTTTAGGGAAAGGAAAAGAAGAAAGAGAGAAAAAAAACACACACACAAGAACAAGAAATATTGGGGTTGGGGGATTTTAGATTTATTATTATTTATGAGTCAAGGCGGAGGATTGTCGGAATTGATTGTTTACGTAATGAGAAGATGAAGGAAATTGATAGGAATTTAATTTGGATTTAGTCTCAAAAGGAAAGAAAATTGAAAGGGGAATTATTCTCGAGCATGTTGTTTCTGAAGGACTAGTGAGATGAGGGAATTTAATATTTAATCGTTGAGGGAGGTGTTAGTAGGTTTAACTTGCGAACAATTCAACAACACTCATTTTCCTAAATAGGGTTGAATTAGGAAAATATGGTAGTTTATAAAAATAATTGGCGTAATATAGTTGTTTAAAATACTTATTGTATCTCCACATGTATGATATACTTATTGCGCTTTCAAATTGTACGATATATTTAATTAAACTGATTTATTAAAGTTTAAACATAAAATTTCAAAAATAATTAAAAATTTCATGCAAAACATTTAATTTTTCAATTTAACTATGGTTATACTTGATTTAGAACCTTTATTAAGATTATATTTGAAAATCATCTAAATTATTATACGTGTGTAGATTTTGTATGTTGTCGTGATTTGTGTTTGAACAGGGAGGGAGGGTGAAAAACTGTTTTTGGAAGTGTATTGGATTAAGATTTAAGATGCCACACTAAAAGTTCTATTTTTTTTTTTTACAAGGTTCAATGTTTTAATAATAATGTATTTATAACACTAGCTATTATATTCCATGTACACATTGTATTCTCTTATTCTCGTTTTATTTTATTTATTTATTGTTTTTTTTAAGATTTATACACATATACCTTTGGTTAATTACATACTTCACCTGGCCCGCTCCATAGACATCTCTATAGGTGCCTCAATAATATTGTTAACAAAATTGAAATTGAAATTGTAAAAAAAAATAGAACATACATGAATGAAAAATTTGGGAGTTTAGTTTAATCAATTTATAGAAAAAATTAGATTCAAATAAATTTGATTTTGAAGTGAATGATACACTACAAGAAGTTTTGTCTCTGCCGACACTTTTTTTTGCCAACGCAACAAAAAATGTCGGCAGAACTAGTTTCTGCCGACGAATTTTTAATGCGTGGACATTTCTTCATATCTGTCGACATAAATATAAGCGTGGGCAAAAAGTAGTGTGGTATTAGTGAAAATCATTAAAGTTGGTTTTTGCCGAAGATTAATTTAGTTTCTCCCTACGTACGGAGTGTGGGCATAAATTTTTAACTTCTGCCCATACAAGAAATGTGGCCAAAAATATTTTAAATCTTACTTATCCCCTTTTTTTCCCCCACACCCCCCCCCCCCCCCCCCCCCCTTTTTTACTTTCTCTCCTCTCACTTTCCCTCTTTTTTTTCTTTTTCATTTTACTTTTATTTTTACATAAAACAAATAAAAGTTTCCCACCCATTCCTTTCATCTTTCCCACCCTCACCCCACAAAATCCACTTCCCGACCCGACCACAAGCTCTCGACAATGATCTCCCAACGAACGATGCCGCCGCCGCTCCTGCCGCCCCGATAACAAGGCTCGACCGCTCCTCCTGCCCGACGCCGGTCCTGCTGCCTTCAACGCTGCCAGACGCGACTGCTGCTACCTCCAACGACGTCGCTGCTGCTGCCTACAGACGCCGGTGCTACCGCCTCCAGACGCCGCTGGTGGTGCCGCCCCTCGCCGTCACTGCTGCTGCCCTGCGCCGTCGCTGCTATCGCCAGTTCGACGCCGCCCGTTGCTACCGCTTCTTCTGCTGCCGCCGCCCCACGCCACTTCTTCTATCGACGCCAGCCTTCTTCTTATGCCGATGTGGGTGGTTGCCGCCATCTTACTAA

mRNA sequence

ATGGCTCGTTTTTGCTACCTTCAATCGCTTTCACCTCCATTTTCGTCTCACCCAACAATACCCATGTCCCCATGTTTCAAACTCATTTCCTCTTTTCACTGCAGCTGCTCATCGTCTTCCTCTTCTTTCCCATTTACAGAGAAACACTCCGTCAAGAGATACAAAAAGACAATTGGTTGTACAAGAACCAATCGGACCAAACTTCTATTACTTCATCGTGTTCGATCTATTCTGTATGATTTTGAGTCCATACAGCAGAATGACATTGCCTTGCAATTGCAAAAGCTCAAGAAATTGTTGCAAATATTGAGGGAAAAGAAGCTAAGTAGTGGAAAATTTTCCCACCCATTCCTTTCATCTTTCCCACCCTCACCCCACAAAATCCACTTCCCGACCCGACCACAAGCTCTCGACAATGATCTCCCAACGAACGATGCCGCCGCCGCTCCTGCCGCCCCGATAACAAGGCTCGACCGCTCCTCCTGCCCGACGCCGGTCCTGCTGCCTTCAACGCTGCCAGACGCGACTGCTGCTACCTCCAACGACGTCGCTGCTGCTGCCTACAGACGCCGGTGCTACCGCCTCCAGACGCCGCTGGTGGTGCCGCCCCTCGCCGTCACTGCTGCTGCCCTGCGCCGTCGCTGCTATCGCCAGTTCGACGCCGCCCGTTGCTACCGCTTCTTCTGCTGCCGCCGCCCCACGCCACTTCTTCTATCGACGCCAGCCTTCTTCTTATGCCGATGTGGGTGGTTGCCGCCATCTTACTAA

Coding sequence (CDS)

ATGGCTCGTTTTTGCTACCTTCAATCGCTTTCACCTCCATTTTCGTCTCACCCAACAATACCCATGTCCCCATGTTTCAAACTCATTTCCTCTTTTCACTGCAGCTGCTCATCGTCTTCCTCTTCTTTCCCATTTACAGAGAAACACTCCGTCAAGAGATACAAAAAGACAATTGGTTGTACAAGAACCAATCGGACCAAACTTCTATTACTTCATCGTGTTCGATCTATTCTGTATGATTTTGAGTCCATACAGCAGAATGACATTGCCTTGCAATTGCAAAAGCTCAAGAAATTGTTGCAAATATTGAGGGAAAAGAAGCTAAGTAGTGGAAAATTTTCCCACCCATTCCTTTCATCTTTCCCACCCTCACCCCACAAAATCCACTTCCCGACCCGACCACAAGCTCTCGACAATGATCTCCCAACGAACGATGCCGCCGCCGCTCCTGCCGCCCCGATAACAAGGCTCGACCGCTCCTCCTGCCCGACGCCGGTCCTGCTGCCTTCAACGCTGCCAGACGCGACTGCTGCTACCTCCAACGACGTCGCTGCTGCTGCCTACAGACGCCGGTGCTACCGCCTCCAGACGCCGCTGGTGGTGCCGCCCCTCGCCGTCACTGCTGCTGCCCTGCGCCGTCGCTGCTATCGCCAGTTCGACGCCGCCCGTTGCTACCGCTTCTTCTGCTGCCGCCGCCCCACGCCACTTCTTCTATCGACGCCAGCCTTCTTCTTATGCCGATGTGGGTGGTTGCCGCCATCTTACTAA

Protein sequence

MARFCYLQSLSPPFSSHPTIPMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKTIGCTRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSGKFSHPFLSSFPPSPHKIHFPTRPQALDNDLPTNDAAAAPAAPITRLDRSSCPTPVLLPSTLPDATAATSNDVAAAAYRRRCYRLQTPLVVPPLAVTAAALRRRCYRQFDAARCYRFFCCRRPTPLLLSTPAFFLCRCGWLPPSY
BLAST of Cla007282 vs. TrEMBL
Match: A0A0A0KBI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428980 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.2e-27
Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 1

Query: 1   MARFCYLQSLSPPFSSHPTIPMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKTIGC 60
           MARFC LQSLS PFSSHPTIP SP FK I SFHCS +SSSSS PFTEKHSVKRY++    
Sbjct: 1   MARFCDLQSLSSPFSSHPTIPRSPNFKPIFSFHCSSASSSSSSPFTEKHSVKRYQRDDWL 60

Query: 61  TRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSG 112
            +    +  +     SI YD ESI+QNDIA+QL +LKKLL++LREK++S+G
Sbjct: 61  YKYQSDQPSVTSSC-SIPYDSESIRQNDIAMQLPELKKLLEVLREKRVSNG 110

BLAST of Cla007282 vs. TrEMBL
Match: A5AFZ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000189 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.9e-09
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 1

Query: 9   SLSPPFSSHPTIPMSP-----CFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKTIGCTRT 68
           S+S  F    T  ++P     C    SS   S SSSSSS PFTEKHSV+RY++      T
Sbjct: 14  SVSSHFGKAKTFGLNPICSLNCTSSSSSSSSSSSSSSSSSPFTEKHSVERYQRDSWVYNT 73

Query: 69  NRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSG 112
                   +    + +D  S+++NDIALQL +LKK+L +LREK+ S G
Sbjct: 74  QVEDASSWN----LPFDSNSVRENDIALQLPELKKMLGVLREKRESGG 117

BLAST of Cla007282 vs. TrEMBL
Match: M5XJY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007378mg PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.9e-09
Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 1

Query: 1   MARFCYLQSLSPPFSS-HPTIPMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKTIG 60
           MA    LQSLS   SS H   P S   + I S H + SS+SS  PFTEK S++RY++   
Sbjct: 1   MALVYKLQSLSSSLSSTHFRKPNSLNPQPICSLHFNSSSNSS--PFTEKTSIERYQRDQW 60

Query: 61  CTRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSG 112
             +    +  L     S+  DF+SI+QNDIALQL +L+KLLQ+LR K+ S G
Sbjct: 61  LYKNQLDQATLC----SVPPDFDSIRQNDIALQLPELRKLLQVLRGKRESEG 106

BLAST of Cla007282 vs. TrEMBL
Match: F6HB92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01470 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-08
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 1

Query: 9   SLSPPFSSHPTIPMSPCFKL----ISSFHCSCSSSSSSFPFTEKHSVKRYKKTIGCTRTN 68
           S+S  F    T  ++P   L     SS   S SSSSSS PFTEKHSV+RY++      T 
Sbjct: 14  SVSSHFGKAKTFGLNPICSLNCTSSSSSSSSSSSSSSSSPFTEKHSVERYQRDSWVYNTQ 73

Query: 69  RTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSG 112
                  +    + +D  S+++NDIALQL +LKK+L +LREK+ S G
Sbjct: 74  VEDASSWN----LPFDSNSVRENDIALQLPELKKMLGVLREKRESGG 116

BLAST of Cla007282 vs. TrEMBL
Match: V4TKZ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031826mg PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07
Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 1

Query: 3   RFCYLQSLSPPFSSHPTI----PMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKK-- 62
           R  +  S SP  S+  +I    P++P   + S      SSSSSS PFTEKHS +RY++  
Sbjct: 6   RLSFSSSSSPLSSACNSIKQFNPINPKSFICSLHFSDTSSSSSSSPFTEKHSFERYQRDQ 65

Query: 63  -TIGCTRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKK 108
                 + NR +        S+  D +S ++NDIALQL +LKKLLQ+LREK+
Sbjct: 66  WVYSSLQHNRPE----PTSPSVSLDADSTRRNDIALQLPELKKLLQVLREKR 113

BLAST of Cla007282 vs. NCBI nr
Match: gi|659122650|ref|XP_008461254.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis melo])

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 71/111 (63.96%), Postives = 86/111 (77.48%), Query Frame = 1

Query: 1   MARFCYLQSLSPPFSSHPTIPMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKTIGC 60
           MARFC LQSLS PFSSHPTIP SP FK I SFHCS SSSSSS PFTEKHS+KRY++    
Sbjct: 1   MARFCDLQSLSSPFSSHPTIPRSPNFKPIFSFHCSYSSSSSSSPFTEKHSIKRYQRDDWL 60

Query: 61  TRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSG 112
            + N++    +    SI YD ES++QNDIA+QL +LKKLL++LREK++SSG
Sbjct: 61  YK-NQSDQPSVTSSCSIPYDSESMRQNDIAMQLPELKKLLEVLREKRVSSG 110

BLAST of Cla007282 vs. NCBI nr
Match: gi|449436257|ref|XP_004135909.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 8.9e-27
Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 1

Query: 1   MARFCYLQSLSPPFSSHPTIPMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKTIGC 60
           MARFC LQSLS PFSSHPTIP SP FK I SFHCS +SSSSS PFTEKHSVKRY++    
Sbjct: 1   MARFCDLQSLSSPFSSHPTIPRSPNFKPIFSFHCSSASSSSSSPFTEKHSVKRYQRDDWL 60

Query: 61  TRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSG 112
            +    +  +     SI YD ESI+QNDIA+QL +LKKLL++LREK++S+G
Sbjct: 61  YKYQSDQPSVTSSC-SIPYDSESIRQNDIAMQLPELKKLLEVLREKRVSNG 110

BLAST of Cla007282 vs. NCBI nr
Match: gi|645250692|ref|XP_008231328.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Prunus mume])

HSP 1 Score: 76.6 bits (187), Expect = 6.8e-11
Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 1

Query: 1   MARFCYLQSLSPPFSS-HPTIPMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKTIG 60
           MA  C LQSLS   SS H   P S   + I S H + SS+SS  PFTEK S++RY++   
Sbjct: 1   MALVCKLQSLSSSLSSTHFRKPNSLNPQPICSLHFNSSSNSS--PFTEKTSIERYQRDQW 60

Query: 61  CTRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSGKF 114
             + +  +  L     S+  DF+SI+QNDIALQL +L+KLLQ+LREK+ S G +
Sbjct: 61  LYKNHLDQATLC----SVPPDFDSIRQNDIALQLPELRKLLQVLREKRESEGGY 108

BLAST of Cla007282 vs. NCBI nr
Match: gi|1009158322|ref|XP_015897227.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Ziziphus jujuba])

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 1

Query: 1   MARFCYLQSLSPPFSSH---PTIPMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKT 60
           MA     +SLS   SSH     +P++P  + I S H + SSS    PFTEKHSV+RY++ 
Sbjct: 1   MALVARPRSLSASSSSHHFRKPVPLNP--RPICSLHINSSSS----PFTEKHSVERYQRD 60

Query: 61  --IGCTRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSG 112
             +   +  RT L       SI  DF S ++NDIALQL +LKKLLQ+LREK+ S G
Sbjct: 61  QWLYKNQFGRTSLC------SIPPDFNSTRENDIALQLPELKKLLQVLREKRESKG 104

BLAST of Cla007282 vs. NCBI nr
Match: gi|694377483|ref|XP_009365043.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase-like [Pyrus x bretschneideri])

HSP 1 Score: 69.7 bits (169), Expect = 8.3e-09
Identity = 55/119 (46.22%), Postives = 70/119 (58.82%), Query Frame = 1

Query: 1   MARFCYLQSLSPPFSSHPTIPMSP----CFKLISS--FHCSCSSSSSSFPFTEKHSVKRY 60
           MA     QSLS  FSS  T    P     F  ISS  F+ S S+SSSS PFTEK SV+RY
Sbjct: 1   MALVSRTQSLSA-FSSSSTHFRKPHSASSFNPISSLRFNSSSSNSSSSSPFTEKTSVQRY 60

Query: 61  KKTIGCTRTNRTKLL--LLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSG 112
           ++     +    +    L     S+  DF S+++NDIALQL +LKKLLQ+LREK+L+ G
Sbjct: 61  QRDRWLYQNQPLEFHQPLPTPCCSLPPDFNSLRENDIALQLPELKKLLQVLREKRLTEG 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KBI8_CUCSA6.2e-2763.06Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428980 PE=3 SV=1[more]
A5AFZ4_VITVI9.9e-0941.67Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000189 PE=3 SV=1[more]
M5XJY8_PRUPE9.9e-0945.54Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007378mg PE=3 SV=1[more]
F6HB92_VITVI2.2e-0842.06Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01470 PE=3 SV=... [more]
V4TKZ0_9ROSI1.4e-0741.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031826mg PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|659122650|ref|XP_008461254.1|2.3e-2763.96PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis melo][more]
gi|449436257|ref|XP_004135909.1|8.9e-2763.06PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis sativus][more]
gi|645250692|ref|XP_008231328.1|6.8e-1146.49PREDICTED: uroporphyrinogen-III C-methyltransferase [Prunus mume][more]
gi|1009158322|ref|XP_015897227.1|1.7e-0945.69PREDICTED: uroporphyrinogen-III C-methyltransferase [Ziziphus jujuba][more]
gi|694377483|ref|XP_009365043.1|8.3e-0946.22PREDICTED: uroporphyrinogen-III C-methyltransferase-like [Pyrus x bretschneideri... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla007282Cla007282.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 86..106
scor