Cla007282 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGTTTTTGCTACCTTCAATCGCTTTCACCTCCATTTTCGTCTCACCCAACAATACCCATGTCCCCATGTTTCAAACTCATTTCCTCTTTTCACTGCAGCTGCTCATCGTCTTCCTCTTCTTTCCCATTTACAGAGAAACACTCCGTCAAGAGATACAAAAAGACAATTGGTTGTACAAGAACCAATCGGACCAAACTTCTATTACTTCATCGTGTTCGATCTATTCTGTATGATTTTGAGTCCATACAGCAGAATGACATTGCCTTGCAATTGCAAAAGCTCAAGAAATTGTTGCAAATATTGAGGGAAAAGAAGCTAAGTAGTGGAAAATGTGGGTCTAAGAATGTAATTTAAAATATGAAGTCGATAGGTTTTAAAATGTGGGTCTGGGAATGTAAATTTCTCCTGAAAATTTCTGGTGAGAGTCCCCCCACCGCAACTCACTTGCAAAGGAAAGGCATAAATGGGGAAGCGGAAGACTAGAGAATTGAAAAATGTTAGAATTAGGCAAATGATAGTGAAATGGTTTTAGGGAAAGGAAAAGAAGAAAGAGAGAAAAAAAACACACACACAAGAACAAGAAATATTGGGGTTGGGGGATTTTAGATTTATTATTATTTATGAGTCAAGGCGGAGGATTGTCGGAATTGATTGTTTACGTAATGAGAAGATGAAGGAAATTGATAGGAATTTAATTTGGATTTAGTCTCAAAAGGAAAGAAAATTGAAAGGGGAATTATTCTCGAGCATGTTGTTTCTGAAGGACTAGTGAGATGAGGGAATTTAATATTTAATCGTTGAGGGAGGTGTTAGTAGGTTTAACTTGCGAACAATTCAACAACACTCATTTTCCTAAATAGGGTTGAATTAGGAAAATATGGTAGTTTATAAAAATAATTGGCGTAATATAGTTGTTTAAAATACTTATTGTATCTCCACATGTATGATATACTTATTGCGCTTTCAAATTGTACGATATATTTAATTAAACTGATTTATTAAAGTTTAAACATAAAATTTCAAAAATAATTAAAAATTTCATGCAAAACATTTAATTTTTCAATTTAACTATGGTTATACTTGATTTAGAACCTTTATTAAGATTATATTTGAAAATCATCTAAATTATTATACGTGTGTAGATTTTGTATGTTGTCGTGATTTGTGTTTGAACAGGGAGGGAGGGTGAAAAACTGTTTTTGGAAGTGTATTGGATTAAGATTTAAGATGCCACACTAAAAGTTCTATTTTTTTTTTTTACAAGGTTCAATGTTTTAATAATAATGTATTTATAACACTAGCTATTATATTCCATGTACACATTGTATTCTCTTATTCTCGTTTTATTTTATTTATTTATTGTTTTTTTTAAGATTTATACACATATACCTTTGGTTAATTACATACTTCACCTGGCCCGCTCCATAGACATCTCTATAGGTGCCTCAATAATATTGTTAACAAAATTGAAATTGAAATTGTAAAAAAAAATAGAACATACATGAATGAAAAATTTGGGAGTTTAGTTTAATCAATTTATAGAAAAAATTAGATTCAAATAAATTTGATTTTGAAGTGAATGATACACTACAAGAAGTTTTGTCTCTGCCGACACTTTTTTTTGCCAACGCAACAAAAAATGTCGGCAGAACTAGTTTCTGCCGACGAATTTTTAATGCGTGGACATTTCTTCATATCTGTCGACATAAATATAAGCGTGGGCAAAAAGTAGTGTGGTATTAGTGAAAATCATTAAAGTTGGTTTTTGCCGAAGATTAATTTAGTTTCTCCCTACGTACGGAGTGTGGGCATAAATTTTTAACTTCTGCCCATACAAGAAATGTGGCCAAAAATATTTTAAATCTTACTTATCCCCTTTTTTTCCCCCACACCCCCCCCCCCCCCCCCCCCCCTTTTTTACTTTCTCTCCTCTCACTTTCCCTCTTTTTTTTCTTTTTCATTTTACTTTTATTTTTACATAAAACAAATAAAAGTTTCCCACCCATTCCTTTCATCTTTCCCACCCTCACCCCACAAAATCCACTTCCCGACCCGACCACAAGCTCTCGACAATGATCTCCCAACGAACGATGCCGCCGCCGCTCCTGCCGCCCCGATAACAAGGCTCGACCGCTCCTCCTGCCCGACGCCGGTCCTGCTGCCTTCAACGCTGCCAGACGCGACTGCTGCTACCTCCAACGACGTCGCTGCTGCTGCCTACAGACGCCGGTGCTACCGCCTCCAGACGCCGCTGGTGGTGCCGCCCCTCGCCGTCACTGCTGCTGCCCTGCGCCGTCGCTGCTATCGCCAGTTCGACGCCGCCCGTTGCTACCGCTTCTTCTGCTGCCGCCGCCCCACGCCACTTCTTCTATCGACGCCAGCCTTCTTCTTATGCCGATGTGGGTGGTTGCCGCCATCTTACTAA ATGGCTCGTTTTTGCTACCTTCAATCGCTTTCACCTCCATTTTCGTCTCACCCAACAATACCCATGTCCCCATGTTTCAAACTCATTTCCTCTTTTCACTGCAGCTGCTCATCGTCTTCCTCTTCTTTCCCATTTACAGAGAAACACTCCGTCAAGAGATACAAAAAGACAATTGGTTGTACAAGAACCAATCGGACCAAACTTCTATTACTTCATCGTGTTCGATCTATTCTGTATGATTTTGAGTCCATACAGCAGAATGACATTGCCTTGCAATTGCAAAAGCTCAAGAAATTGTTGCAAATATTGAGGGAAAAGAAGCTAAGTAGTGGAAAATTTTCCCACCCATTCCTTTCATCTTTCCCACCCTCACCCCACAAAATCCACTTCCCGACCCGACCACAAGCTCTCGACAATGATCTCCCAACGAACGATGCCGCCGCCGCTCCTGCCGCCCCGATAACAAGGCTCGACCGCTCCTCCTGCCCGACGCCGGTCCTGCTGCCTTCAACGCTGCCAGACGCGACTGCTGCTACCTCCAACGACGTCGCTGCTGCTGCCTACAGACGCCGGTGCTACCGCCTCCAGACGCCGCTGGTGGTGCCGCCCCTCGCCGTCACTGCTGCTGCCCTGCGCCGTCGCTGCTATCGCCAGTTCGACGCCGCCCGTTGCTACCGCTTCTTCTGCTGCCGCCGCCCCACGCCACTTCTTCTATCGACGCCAGCCTTCTTCTTATGCCGATGTGGGTGGTTGCCGCCATCTTACTAA ATGGCTCGTTTTTGCTACCTTCAATCGCTTTCACCTCCATTTTCGTCTCACCCAACAATACCCATGTCCCCATGTTTCAAACTCATTTCCTCTTTTCACTGCAGCTGCTCATCGTCTTCCTCTTCTTTCCCATTTACAGAGAAACACTCCGTCAAGAGATACAAAAAGACAATTGGTTGTACAAGAACCAATCGGACCAAACTTCTATTACTTCATCGTGTTCGATCTATTCTGTATGATTTTGAGTCCATACAGCAGAATGACATTGCCTTGCAATTGCAAAAGCTCAAGAAATTGTTGCAAATATTGAGGGAAAAGAAGCTAAGTAGTGGAAAATTTTCCCACCCATTCCTTTCATCTTTCCCACCCTCACCCCACAAAATCCACTTCCCGACCCGACCACAAGCTCTCGACAATGATCTCCCAACGAACGATGCCGCCGCCGCTCCTGCCGCCCCGATAACAAGGCTCGACCGCTCCTCCTGCCCGACGCCGGTCCTGCTGCCTTCAACGCTGCCAGACGCGACTGCTGCTACCTCCAACGACGTCGCTGCTGCTGCCTACAGACGCCGGTGCTACCGCCTCCAGACGCCGCTGGTGGTGCCGCCCCTCGCCGTCACTGCTGCTGCCCTGCGCCGTCGCTGCTATCGCCAGTTCGACGCCGCCCGTTGCTACCGCTTCTTCTGCTGCCGCCGCCCCACGCCACTTCTTCTATCGACGCCAGCCTTCTTCTTATGCCGATGTGGGTGGTTGCCGCCATCTTACTAA MARFCYLQSLSPPFSSHPTIPMSPCFKLISSFHCSCSSSSSSFPFTEKHSVKRYKKTIGCTRTNRTKLLLLHRVRSILYDFESIQQNDIALQLQKLKKLLQILREKKLSSGKFSHPFLSSFPPSPHKIHFPTRPQALDNDLPTNDAAAAPAAPITRLDRSSCPTPVLLPSTLPDATAATSNDVAAAAYRRRCYRLQTPLVVPPLAVTAAALRRRCYRQFDAARCYRFFCCRRPTPLLLSTPAFFLCRCGWLPPSY
BLAST of Cla007282 vs. TrEMBL
Match: A0A0A0KBI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428980 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.2e-27 Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 1
BLAST of Cla007282 vs. TrEMBL
Match: A5AFZ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000189 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.9e-09 Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 1
BLAST of Cla007282 vs. TrEMBL
Match: M5XJY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007378mg PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.9e-09 Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 1
BLAST of Cla007282 vs. TrEMBL
Match: F6HB92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01470 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.2e-08 Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 1
BLAST of Cla007282 vs. TrEMBL
Match: V4TKZ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031826mg PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07 Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 1
BLAST of Cla007282 vs. NCBI nr
Match: gi|659122650|ref|XP_008461254.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis melo]) HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27 Identity = 71/111 (63.96%), Postives = 86/111 (77.48%), Query Frame = 1
BLAST of Cla007282 vs. NCBI nr
Match: gi|449436257|ref|XP_004135909.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis sativus]) HSP 1 Score: 129.4 bits (324), Expect = 8.9e-27 Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 1
BLAST of Cla007282 vs. NCBI nr
Match: gi|645250692|ref|XP_008231328.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Prunus mume]) HSP 1 Score: 76.6 bits (187), Expect = 6.8e-11 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 1
BLAST of Cla007282 vs. NCBI nr
Match: gi|1009158322|ref|XP_015897227.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Ziziphus jujuba]) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09 Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 1
BLAST of Cla007282 vs. NCBI nr
Match: gi|694377483|ref|XP_009365043.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase-like [Pyrus x bretschneideri]) HSP 1 Score: 69.7 bits (169), Expect = 8.3e-09 Identity = 55/119 (46.22%), Postives = 70/119 (58.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |