Cla006930 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla006930
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Flap endonuclease-1 (AHRD V1 -- B0I2X9_AERPX); contains Interpro domain(s) IPR006084 DNA repair protein (XPGC)/yeast Rad
Location	Chr6 : 118076 .. 124063 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTCGGAGGCCATTTCTGGGATTTACTGAAACCTCACGCTCGAACTGAGGGCTTCGATTTCCTCAGGAACAAGCGGGTCGCCGTCGACCTCTCTTTCTGGATTGTCCAGCACGAGACCGCCATTAAAGCCAGTGCTCGAAGCCCCCATTTGAGGCTCACATTCTTCCGCACCATCACTCTCTTTGCCAAGGTCTTGTTTTAGTTTAGTATTTTGTTTCTTTGGGTGCAAGAATTCCCCGAATAAATTCTCTTGCCGTTGTGGGAATTGATGTTTTGGGTGTAAGAATTTGAGATAATTATTGGGTTTTGTAAACTTTCTTTCATTATCCCCTTTCGTTTATTGCATATCAGTAAAATGAATAAATTTGGAAATAAATTTGGAATTTGGTTGGTTATAATTCTTCTGGTGTAAGATGATTATGTTTCTCTTGTTTTTCCTTTTGTTGATGGCATCAGTAAGTCGTTGATTTATGGTGGGATTTGATTCAAGCTTATGGTGATGGTGTTGTGTATTTTGCAGTTCGGTGCGTTTCCTGTGTTTGTAGTTGATGGAACTCCTTCACCCTTGAAATCTAAGACAAGGATTGCCAGATTTTTCCGGTTATCTGGTATTGACACTTCTGATCTACAAAAGGTTGAAGATCGCATTTCAGTTGACAGGAATCGCAAGTTTGCAAAATGTGTTAAAGAATGTGTGGTAGGGTGTTTCACTTGCTTTGACTATTTTCACCAAAAATATGTCCATCAATTTATACTCCACTTGATCTGATTTGCTTTTGAACGAGAATGGTATGGTTTCGTGCAACCGCTCCAAGGGCTTGGGATGTTTGGAAATAACCTCCCAAGTCCTGGTTCCAAGACTCAAGGTGAAATAGTTAATAACCTCTCGTAGTTGATCTTGGATGAGTGAAGTCTCCTGAAGATTAGTGAGGTGTGCCGTGAGTATAATGCTAGAAACGGTTTCTCTGGATGCATGGATTATATATAGAAAATAAATGGTGTTTTGTGCATCTTGGGTTTTTGTTATTGAATTCCACATTGTGAAGTCTCTTCAATGTTGGTGTACATGAGCTTTGTCACTGCTGCATGTGCCTCAACTTTTTGATTAATTTGAGCCATCCATTCTTATCCTGTTACTCGTTTCAGATACTGTGATGCTTTTGTTTAATTTGATGGACTTGCAATGCTCATCATGTGTCTTACTAATAGTTACTTCACAGGAACTGCTTGAGCTATTTGGGGTGCCTGTCTTAGAAGCAAAAGGTGAAGCTGAAGCACTATGCGCCGAGTTGAATCGAAAAGGCCTTGTGGATGCCTGCATCACAGCTGACAGCGATGCTTTTCTGTTTGGTGCCAAATGTGTAATTAAAAGCTTCCATCCCAATTCAAAAGCAAGTACTCCTATCTATACAAGTCTTCTTTTCTATGTGATTTCTTTCTTACCGTTTTCTCTTGGATATCATCACATGCAGGAACCACTTGAATGCTACTTCATGTCAGATATTGAAGCTGCTCTTGGGTTGAATAGGAAGCATTTAATAGCAATCTCTCTCCTGGTTGGAAATGACCACGACTTAAATGGCGTGCAAGGAGTGGGATTGGATACTGCTGTTCGTTTCGTCCAAGATTACACAGATGATGAGATTTTAAATAAGTAATATTTAGCTTACATGTTTTTCCAAACACCAATAAGTATATTTGTAGCATTATTATTCGGTATTTTAACTGTGTTTGAACTGTTGAGTGTCATGCAGACTGTATGAAATAGGCAACAAGGATAATACACAGCTTCAGAGTGGTCTTGAATTGGTAAATAACTATGGACAATCTTCGGAAACGAACTCAAGAAAGATCAAGTGTTCTCACTGTTCCTTCTGTGGTCATCCAGGCAGCAAAAGAGCCCATGTTAAGTTCCCTTGTGAATACTGTGATGTGAGACATGGCGATGGTTGTATCAAAAAGCCGGATGGATTTAAATGCAATTGTTCCTCATGTGACATGGTACCTTGTTTTCGTTTCCCTCTATTTGATTTTACTCTGCATTGTGGCCTGTATGAATCACACTTTTTTGATCTTTCTGCTATTAGCTCCCATTGTGAAGATTTCTGCTTTCTTTTGCTTCTTTACCTGAGCAACATGAGTTTTGGTTTTTGTCAAATATTTGTTTAAAAGAATTTTTTCGTTCATGATGGGCAGGATCGAGAAGAAAAGGAGAAAAAGAAGCAAGAAAATTGGCGATTAAGAGTTTGCAACAGGATTGCTATGGAGCCAAATTTTCCCAGTAGTGAACTTATTCAGATGTACCAGTGTGACAATCACAGTTATTTTAGTGGTATGAGTGGCTATTTTGCATTTCAAGTAGCAAATATTGTTAGAATTTGAAGCGCATTGGTTCGAGCAGTAGATGGCATTATTTTTTAACAAACACCTCCATCTTCTTTTATGTGGCAATATACTTTTTGAGAGTTGCTGTCTTCAATAAACACCTATTGGTTCACTATATTAAATGAAGTGTCAGTTTGTTTAAGAATGCCTTTTGCCTCTTTTGTAGTGTATAAGATTGTCTTGAATAACTTGTGCACATATTACGTTGTTATCTCATTTGATCTGATTCTACTGCAGATGATGACCTTATCTTATCCTGGGGAAGCCCAAGAACCGAAATGCTGGTTGATTTTCTAGTTTTTCATCTACAGTGGGAGCCATCATACACTCGTCAGAGGATGCTTCCCATGCTATCGACCATTTTTCTCAGAGAAATGGCTAATAATCCAATTCAAACTTTGTTATACGGCCAGTACGAGTTTGATTCTATACTCAGAGAGAAAATAAGATATGGACATCCGTTTTATGTTGTCAAATGGAAAAAGGCGGTCCCAACCCTCGGCAATGTTATATATGAAGGGTCTTCGGAGGGGTTTGGCACTGGGCCAGAAGATGCGATTGATGTCGATGAAGCAGTGGATTTGACAGATGAATCTGATTCTCCAAAAATTCATATTCAAGATGGGTTCTCCTTTCTATTGACTGATGAGAATATGGACCTTGTTGGCGCTGCTTATCCCGAACAGACTGCCAAATTTTTGCAGGAAAAGGTAATCATCGTTTGTGTTTTTTTGTTCCATTCTTCATTTCTTCCTTTGTGTACTATACTATTGAAGTGGGAATGGCTTAGCTTAGTTTCTTTTTGCAATAATGTTTACAAGCTTTCCTTTAGAGAGAGAGAGGGCAGTTTACTTGTAGGGTTGATGAATGCTTGTGTTGTGTTTGTTGTTTGTGAATGTGATGGATATATCTTAAGCTGCAATGAATATTTTTCATTTATGTTCTAAAATTCTTGGTTGGAACTACTAAAGGAAATGAAAAGGCAGAAGACCCCAACCACACCGGCTTGTGGGACTAGTGGAAAATCTGATTCATCCAAATCGAAAGGTGTCCAGTTAAGTATTACTGAGTTCTACCGTGCAACAAAAACGCAACAGCAAACAGCAGAGACAACAGATATGACAAATGAGGACGAGGAGACGAGTACGGGAAAGAGAAAAGCATCAAGTTCTACCACTCTTTCGAAGTCGGTAAGGCGCCGCCTTTTGTTTGACTAGAGCTCTTTGAGCTATTGTGTGCCCTCTGATTATGGAGTACAGACCTCTATAGTTTAGAATCTATGTATAAAGTTTGTTTTTGCTAGAGCTCTTTGAGCTGTTGTGTGCCCTCTGATTATGGAGTGCAAACCTCTATAGTTTTAGAATATATGTATAAAGTTTTTTTTTTTTTTTTTTTTTTTGTGCTGATCTAGATCTTTTGAGCTTTCTTTTGTTAAGCATTGATTGGTGCTTTTAATGATGTAATTATAATATGTTAGGGTTTAGCCAAGATTTCAATTTTGTCTATCACTATATCCCCTTGGTTAAATCTTCCCTAATCTTACTACCATTACTGTATATATCATGACTTTAATTGTGTTATGGTAAAAATAAAAATAATATTTATCATAGTCAAGCAAACAGTGTCGACCACAACAAAGTCCTGATATATCAGTTTTATAAATGATATTTTTTAAATAAAGCATATCAATTGATTTATATACCAAATATAATGCATATCAGTTGACTGATATACCGAAATATAAAGATATAAAGTATAACTGATATACCTACTGATACACAAATGAGGGTAAAACGTGAAAATAATAAAAAAAAGAATAGGTTTAAATTTTTTGCTATATTTGCAAGTTAGAATATAATTACTATATTTGCAAATACCCTTACTTCTACTAAATGGTTGATTCCAAAACTATCGGAACTTAGATCTTCATAAAGATTGAATTTGGTCTAATACACTTTAGTAAAAAATGTTGAGGACATACAGAGATGGAGTTGGTTGATGAACCATGCTCAAAGTAAAAAATCAAACAACTTTCCTTAAGAAGGCGCTTAAAAAATGGTAATAATTTTCTAAAGATGGAAAATCACCTATCCAAGTCGTATATGGTAGTCTTATTTTACATGAAACAACATGCCAAATTTGTAGTTTTATCTTCACAACTTACTATAATGCCCTTACAAAAGCAAGCCTCTGATTGCATATGGTATAGAGAGATTGATCATGTTCTACTCTCTCTCTCTCTCTCTCTCTGTTGGGGGATGGAATTGACAAAAAAATGGAAGGCATGTGAAGTATTCAGAGTTTTGGTGGTTGATCATGATTCTACAAGTCTAAAAACTGTGTGCAAAATGCTGGATTTGTGTGGATATGAAGGTAGTTAAATTAATTAGATGATTTAGTATTGTATAAGTTTTTAATAAAATTGAATATTGGGCTGAATTTGTTTATTATTTTGTTGATGGTGACAGTTGTTAGTGCTAATTGTGGCATTGATGCATTGGAGATGGTAAGGGATGGAGAAAATGATGTTCATTTGGTTTTAACAGAACTCCATTTGCCTGATATGGGTACATATGAATTTCTAGAGAAGCTTATTATGGACCAAAAAACATTGAAATTGCCAATTGTTAGTAAGTAATTATAAGTTTTTAAGTTTCCTAACATGCATCACTACAAATGAAATGAAATTAAGGTAGTTTTGTTTTTGATGTTCAGTTATATCAGCTGATGATAACGAGATTGCAAAGTTGGGGTGCCTCTTTAAAGGAGCAATGCTACATCTTGTAAAACCACTCGCCATGAAAACTATAAGAAATTTGTGGCAATTTGCAATTATCAAAGGAATTATTACACCACCACCCAACATTAATCCCCTTCTTTTTCAACACAAACACAAGAAGATAACCAAAATTATAAAACAACTACCTCATCATTCAAGGCCAAAGCTCATTTGGACTCAACAATTGCATAATACATTCTTGCACACCATTAAGACATTGGGAATTGACAGTGAGACACACCCCTTAAATTTTTTTTTTCTTTTTCTTTTGTCTACTCTCGTTAATTAATATCTTTTTAGAAGCTCATCCAAAGGAGATACTACAACATATGAATGTTCCTGGGCTAAGAATACAAAACATTTCGAGTCATCTCCAGATGATTAAACACACACACTATATATATATATATAAGTAAAACTCATAACATATGCTACTTGTTATTGTTAGTTAACCTTCTTCTACGAATTAATTTGTAGAAGTTTCGTCTGCCATTGAAACGAAGTCAAAATGGAATTGATAAAAAAAAAGATGAGGAGTCAATTATTGAATTTCCAAAGCAACAAGGGGCAACAAACTCACCATCTCCATCACACTTGGAAAGGCAATGCCACAACCATCAGTTTGGTCCATTCATTGGCCAACCAAAGCCACTGGAAGATCAAGAAGAGGGGAGTCTAAATTTTGGTTTGAATGTCAAACACAAAAAAATGACTACATCATCACAAATGGAACATCAGCATCAACCTTACATGTTTGAGGTTGATGAAGGAGGAGAAGTTGATGCAATAGTTCATACTTTCCATGACCAACATTATTAA

mRNA sequence

ATGGGAGTCGGAGGCCATTTCTGGGATTTACTGAAACCTCACGCTCGAACTGAGGGCTTCGATTTCCTCAGGAACAAGCGGGTCGCCGTCGACCTCTCTTTCTGGATTGTCCAGCACGAGACCGCCATTAAAGCCAGTGCTCGAAGCCCCCATTTGAGGCTCACATTCTTCCGCACCATCACTCTCTTTGCCAAGTTCGGTGCGTTTCCTGTGTTTGTAGTTGATGGAACTCCTTCACCCTTGAAATCTAAGACAAGGATTGCCAGATTTTTCCGGTTATCTGGTATTGACACTTCTGATCTACAAAAGGTTGAAGATCGCATTTCAGTTGACAGGAATCGCAAGTTTGCAAAATGTGTTAAAGAATGTGTGGAACTGCTTGAGCTATTTGGGGTGCCTGTCTTAGAAGCAAAAGGTGAAGCTGAAGCACTATGCGCCGAGTTGAATCGAAAAGGCCTTGTGGATGCCTGCATCACAGCTGACAGCGATGCTTTTCTGTTTGGTGCCAAATGTGTAATTAAAAGCTTCCATCCCAATTCAAAAGCAAGTACTCCTATCTATACAAGTCTTCTTTTCTATGTGATTTCTTTCTTACCGTTTTCTCTTGGATATCATCACATGCAGGAACCACTTGAATGCTACTTCATGTCAGATATTGAAGCTGCTCTTGGGTTGAATAGGAAGCATTTAATAGCAATCTCTCTCCTGGTTGGAAATGACCACGACTTAAATGGCGTGCAAGGAGTGGGATTGGATACTGCTGTTCGTTTCGTCCAAGATTACACAGATGATGAGATTTTAAATAAACTGTATGAAATAGGCAACAAGGATAATACACAGCTTCAGAGTGGTCTTGAATTGGTAAATAACTATGGACAATCTTCGGAAACGAACTCAAGAAAGATCAAGTGTTCTCACTGTTCCTTCTGTGGTCATCCAGGCAGCAAAAGAGCCCATGTTAAGTTCCCTTGTGAATACTGTGATGTGAGACATGGCGATGGTTGTATCAAAAAGCCGGATGGATTTAAATGCAATTGTTCCTCATGTGACATGTGGGAGCCATCATACACTCGTCAGAGGATGCTTCCCATGCTATCGACCATTTTTCTCAGAGAAATGGCTAATAATCCAATTCAAACTTTGTTATACGGCCAGTACGAGTTTGATTCTATACTCAGAGAGAAAATAAGATATGGACATCCGTTTTATGTTGTCAAATGGAAAAAGGCGGTCCCAACCCTCGGCAATGTTATATATGAAGGGTCTTCGGAGGGGTTTGGCACTGGGCCAGAAGATGCGATTGATGTCGATGAAGCAGTGGATTTGACAGATGAATCTGATTCTCCAAAAATTCATATTCAAGATGGGTTCTCCTTTCTATTGACTGATGAGAATATGGACCTTGTTGGCGCTGCTTATCCCGAACAGACTGCCAAATTTTTGCAGGAAAAGGCATGTGAAGTATTCAGAGTTTTGGTGGTTGATCATGATTCTACAAGTCTAAAAACTGTGTGCAAAATGCTGGATTTGTGTGGATATGAAGTTGTTAGTGCTAATTGTGGCATTGATGCATTGGAGATGGTAAGGGATGGAGAAAATGATGTTCATTTGGTTTTAACAGAACTCCATTTGCCTGATATGGGTACATATGAATTTCTAGAGAAGCTTATTATGGACCAAAAAACATTGAAATTGCCAATTGTTATTATATCAGCTGATGATAACGAGATTGCAAAGTTGGGGTGCCTCTTTAAAGGAGCAATGCTACATCTTAAGTTTCGTCTGCCATTGAAACGAAGTCAAAATGGAATTGATAAAAAAAAAGATGAGGAGTCAATTATTGAATTTCCAAAGCAACAAGGGGCAACAAACTCACCATCTCCATCACACTTGGAAAGGCAATGCCACAACCATCAGTTTGGTCCATTCATTGGCCAACCAAAGCCACTGGAAGATCAAGAAGAGGGGAGTCTAAATTTTGGTTTGAATGTCAAACACAAAAAAATGACTACATCATCACAAATGGAACATCAGCATCAACCTTACATGTTTGAGGTTGATGAAGGAGGAGAAGTTGATGCAATAGTTCATACTTTCCATGACCAACATTATTAA

Coding sequence (CDS)

ATGGGAGTCGGAGGCCATTTCTGGGATTTACTGAAACCTCACGCTCGAACTGAGGGCTTCGATTTCCTCAGGAACAAGCGGGTCGCCGTCGACCTCTCTTTCTGGATTGTCCAGCACGAGACCGCCATTAAAGCCAGTGCTCGAAGCCCCCATTTGAGGCTCACATTCTTCCGCACCATCACTCTCTTTGCCAAGTTCGGTGCGTTTCCTGTGTTTGTAGTTGATGGAACTCCTTCACCCTTGAAATCTAAGACAAGGATTGCCAGATTTTTCCGGTTATCTGGTATTGACACTTCTGATCTACAAAAGGTTGAAGATCGCATTTCAGTTGACAGGAATCGCAAGTTTGCAAAATGTGTTAAAGAATGTGTGGAACTGCTTGAGCTATTTGGGGTGCCTGTCTTAGAAGCAAAAGGTGAAGCTGAAGCACTATGCGCCGAGTTGAATCGAAAAGGCCTTGTGGATGCCTGCATCACAGCTGACAGCGATGCTTTTCTGTTTGGTGCCAAATGTGTAATTAAAAGCTTCCATCCCAATTCAAAAGCAAGTACTCCTATCTATACAAGTCTTCTTTTCTATGTGATTTCTTTCTTACCGTTTTCTCTTGGATATCATCACATGCAGGAACCACTTGAATGCTACTTCATGTCAGATATTGAAGCTGCTCTTGGGTTGAATAGGAAGCATTTAATAGCAATCTCTCTCCTGGTTGGAAATGACCACGACTTAAATGGCGTGCAAGGAGTGGGATTGGATACTGCTGTTCGTTTCGTCCAAGATTACACAGATGATGAGATTTTAAATAAACTGTATGAAATAGGCAACAAGGATAATACACAGCTTCAGAGTGGTCTTGAATTGGTAAATAACTATGGACAATCTTCGGAAACGAACTCAAGAAAGATCAAGTGTTCTCACTGTTCCTTCTGTGGTCATCCAGGCAGCAAAAGAGCCCATGTTAAGTTCCCTTGTGAATACTGTGATGTGAGACATGGCGATGGTTGTATCAAAAAGCCGGATGGATTTAAATGCAATTGTTCCTCATGTGACATGTGGGAGCCATCATACACTCGTCAGAGGATGCTTCCCATGCTATCGACCATTTTTCTCAGAGAAATGGCTAATAATCCAATTCAAACTTTGTTATACGGCCAGTACGAGTTTGATTCTATACTCAGAGAGAAAATAAGATATGGACATCCGTTTTATGTTGTCAAATGGAAAAAGGCGGTCCCAACCCTCGGCAATGTTATATATGAAGGGTCTTCGGAGGGGTTTGGCACTGGGCCAGAAGATGCGATTGATGTCGATGAAGCAGTGGATTTGACAGATGAATCTGATTCTCCAAAAATTCATATTCAAGATGGGTTCTCCTTTCTATTGACTGATGAGAATATGGACCTTGTTGGCGCTGCTTATCCCGAACAGACTGCCAAATTTTTGCAGGAAAAGGCATGTGAAGTATTCAGAGTTTTGGTGGTTGATCATGATTCTACAAGTCTAAAAACTGTGTGCAAAATGCTGGATTTGTGTGGATATGAAGTTGTTAGTGCTAATTGTGGCATTGATGCATTGGAGATGGTAAGGGATGGAGAAAATGATGTTCATTTGGTTTTAACAGAACTCCATTTGCCTGATATGGGTACATATGAATTTCTAGAGAAGCTTATTATGGACCAAAAAACATTGAAATTGCCAATTGTTATTATATCAGCTGATGATAACGAGATTGCAAAGTTGGGGTGCCTCTTTAAAGGAGCAATGCTACATCTTAAGTTTCGTCTGCCATTGAAACGAAGTCAAAATGGAATTGATAAAAAAAAAGATGAGGAGTCAATTATTGAATTTCCAAAGCAACAAGGGGCAACAAACTCACCATCTCCATCACACTTGGAAAGGCAATGCCACAACCATCAGTTTGGTCCATTCATTGGCCAACCAAAGCCACTGGAAGATCAAGAAGAGGGGAGTCTAAATTTTGGTTTGAATGTCAAACACAAAAAAATGACTACATCATCACAAATGGAACATCAGCATCAACCTTACATGTTTGAGGTTGATGAAGGAGGAGAAGTTGATGCAATAGTTCATACTTTCCATGACCAACATTATTAA

Protein sequence

MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTITLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCVKECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNSKASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSRKIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDMWEPSYTRQRMLPMLSTIFLREMANNPIQTLLYGQYEFDSILREKIRYGHPFYVVKWKKAVPTLGNVIYEGSSEGFGTGPEDAIDVDEAVDLTDESDSPKIHIQDGFSFLLTDENMDLVGAAYPEQTAKFLQEKACEVFRVLVVDHDSTSLKTVCKMLDLCGYEVVSANCGIDALEMVRDGENDVHLVLTELHLPDMGTYEFLEKLIMDQKTLKLPIVIISADDNEIAKLGCLFKGAMLHLKFRLPLKRSQNGIDKKKDEESIIEFPKQQGATNSPSPSHLERQCHNHQFGPFIGQPKPLEDQEEGSLNFGLNVKHKKMTTSSQMEHQHQPYMFEVDEGGEVDAIVHTFHDQHY

Homology

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BLAST of Cla006930 vs. Swiss-Prot
Match: GENL1_ARATH (Flap endonuclease GEN-like 1 OS=Arabidopsis thaliana GN=GEN1 PE=2 SV=3)

HSP 1 Score: 407.9 bits (1047), Expect = 2.2e-112
Identity = 204/349 (58.45%), Postives = 251/349 (71.92%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGG+FWDLL+P+A+ +GFDFLRNKRVAVDLSFWIVQHETA+K     PHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
            LF+KFGA+PVFVVDGTPSPLKS+ RI+RFFR SGIDT +L  ++D +SV+RN+ F++ V
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEWV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVELLEL G+PVL+A GEAEALCA+LN +G VDACIT DSDAFLFGA CVIK   PNS
Sbjct: 121 RECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           +                           EP ECY MS IE+ LGL RKHLIAISLLVGND
Sbjct: 181 R---------------------------EPFECYHMSHIESGLGLKRKHLIAISLLVGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           +D  GV G+G+D A+R V+++++D++L +L +IGN     +  G++  ++ G+   +  +
Sbjct: 241 YDSGGVLGIGVDKALRIVREFSEDQVLERLQDIGNGLQPAVPGGIKSGDD-GEEFRSEMK 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSC 350
           K +  HCS CGH GSKR H K  CE+C      GCIKKP GF+C CS C
Sbjct: 301 K-RSPHCSRCGHLGSKRTHFKSSCEHCGC--DSGCIKKPLGFRCECSFC 318

HSP 2 Score: 105.1 bits (261), Expect = 3.1e-21
Identity = 65/154 (42.21%), Postives = 88/154 (57.14%), Query Frame = 1


Query: 352 WEPSYTRQRMLPMLSTIFLREMA-NNPIQTLLYGQYEFDSILREKIRYGHPFYVVKWKKA 411
           W+PSY R+ +LPMLSTI+LRE A NN    LL  QYEF SI   K RYGH  +V++W+K 
Sbjct: 389 WDPSYVRKMLLPMLSTIYLREKARNNTGYALLCDQYEFHSIKCIKTRYGHQSFVIRWRKP 448

Query: 412 VPTLGNVIYEGSSEGFGTGPEDAIDV----DEAVDLTDESDSPKIHIQDGFSFLLTDENM 471
             T G   Y  S     + PE++I V    +E+VD  D  + P++   +G  FLLTDE +
Sbjct: 449 KSTSG---YSHSH----SEPEESIVVLEEEEESVDPLDGLNEPQVQNDNGDCFLLTDECI 508

Query: 472 DLVGAAYPEQTAKFLQEKACEVFRVLVVDHDSTS 501
            LV +A+P++T  FL EK     +   V  + T+
Sbjct: 509 GLVQSAFPDETEHFLHEKKLRESKKKNVSEEETA 535

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BLAST of Cla006930 vs. Swiss-Prot
Match: GENL1_ORYSJ (Flap endonuclease GEN-like 1 OS=Oryza sativa subsp. japonica GN=RAD PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.1e-98
Identity = 188/358 (52.51%), Postives = 231/358 (64.53%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKAS---ARSPHLRLTFF 60
           MGVGG FWDLLKP+AR EG  +LR +RVAVDLSFW+V H  AI+A    AR PHLR  FF
Sbjct: 1   MGVGGSFWDLLKPYARHEGAGYLRGRRVAVDLSFWVVSHSAAIRARSPHARLPHLRTLFF 60

Query: 61  RTITLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVD-----R 120
           RT++LF+K GAFPVFVVDG PSPLKS+ R ARFFR SG+D + L   E   S D     R
Sbjct: 61  RTLSLFSKMGAFPVFVVDGQPSPLKSQVRAARFFRGSGMDLAALPSTEAEASADALVQPR 120

Query: 121 NRKFAKCVKECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCV 180
           N KF + V++CVELLE  G+PVL AKGE EALCA+LN +G VDACIT+DSDAFLFGAK V
Sbjct: 121 NAKFTRYVEDCVELLEYLGMPVLRAKGEGEALCAQLNNQGHVDACITSDSDAFLFGAKTV 180

Query: 181 IKSFHPNSKASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIA 240
           IK    N K                           EP ECY M+DIE+ LGL RK ++A
Sbjct: 181 IKVLRSNCK---------------------------EPFECYNMADIESGLGLKRKQMVA 240

Query: 241 ISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYG 300
           ++LLVG+DHDL+GV G G +TA+RFVQ + +D +L KLYEIG      +      +++  
Sbjct: 241 MALLVGSDHDLHGVPGFGPETALRFVQLFDEDNVLAKLYEIGKGVYPFIGVSAPNIDDLP 300

Query: 301 QSSETNSRKIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCD 351
             S  +  + +  HCS CGHPG+K+ H+K  C +C V   + C++KP GF C C SCD
Sbjct: 301 SPSTKSLPRARSPHCSHCGHPGNKKNHIKDGCNFCLVDSLENCVEKPAGFICECPSCD 331

HSP 2 Score: 121.3 bits (303), Expect = 4.2e-26
Identity = 64/151 (42.38%), Postives = 91/151 (60.26%), Query Frame = 1


Query: 352 WEPSYTRQRMLPMLSTIFLREMANNPIQT-LLYGQYEFDSILREKIRYGHPFYVVKWKKA 411
           WEP+Y RQRMLPMLSTI+LREMA++  ++ LLY QY+F SI R KIRYGHP+Y+VKWK+ 
Sbjct: 403 WEPAYIRQRMLPMLSTIYLREMASSQSKSFLLYDQYKFHSIQRIKIRYGHPYYLVKWKRV 462

Query: 412 VPTLGN-----------------VIYEGSSEGFGTGPEDAIDVDEAVDLTDESDSPKIHI 471
             ++ +                  + +G  E      E+   + E  +L DE D P++  
Sbjct: 463 TRSMISNDPPSKQTELEGKNDKVEVLDGDDEVVDEEEEEPTMISETTELLDEPDVPQVLD 522

Query: 472 QDGFSFLLTDENMDLVGAAYPEQTAKFLQEK 485
            D   FLLTDE+++LV AA+P++  +F +E+
Sbjct: 523 DDKDCFLLTDEDIELVNAAFPDEAQRFQEEQ 553

[Close]

BLAST of Cla006930 vs. Swiss-Prot
Match: GEN_HUMAN (Flap endonuclease GEN homolog 1 OS=Homo sapiens GN=GEN1 PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-35
Identity = 107/333 (32.13%), Postives = 157/333 (47.15%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIK--ASARSPHLRLTFFR 60
           MGV    W +L+P  +      L  K +AVDLS W+ + +T  K   S   PHLR  FFR
Sbjct: 1   MGVND-LWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFR 60

Query: 61  TITLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAK 120
            I+   +     VFV++G P  LK+     R     G       +   R        F  
Sbjct: 61  -ISYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGR------SHFKS 120

Query: 121 CVKECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHP 180
            ++EC+ +LE  G+P ++A GEAEA+CA LN  G VD C+T D D FL+GA+ V ++F  
Sbjct: 121 VLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTM 180

Query: 181 NSKASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVG 240
           N+K                             ++CY MS I++ LGL+R  L+ +++L+G
Sbjct: 181 NTK--------------------------DPHVDCYTMSSIKSKLGLDRDALVGLAILLG 240

Query: 241 NDHDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETN 300
            D+   GV GVG + A++ +Q      IL              QS L+  N + ++S  +
Sbjct: 241 CDYLPKGVPGVGKEQALKLIQ------ILKG------------QSLLQRFNRWNETSCNS 281

Query: 301 SRKI----KCSHCSFCGHPGSKRAHVKFPCEYC 328
           S ++    K +HCS C HPGS + H +  C  C
Sbjct: 301 SPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLC 281

[Close]

BLAST of Cla006930 vs. Swiss-Prot
Match: GEN_MOUSE (Flap endonuclease GEN homolog 1 OS=Mus musculus GN=Gen1 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 8.4e-35
Identity = 103/329 (31.31%), Postives = 153/329 (46.50%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIK--ASARSPHLRLTFFR 60
           MGV    W +L+P  +      L  K +AVDLS W+ + +T  K   + + PHLR  FFR
Sbjct: 1   MGVND-LWQILEPVKQHIHLQDLSGKTIAVDLSLWVCEAQTVKKMIGTVKKPHLRNLFFR 60

Query: 61  TITLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAK 120
            I+   +     VFV++G P  LK+     R     G       +   R        F  
Sbjct: 61  -ISYLTQMNVKLVFVMEGEPPMLKADVISKRTQTRYGPSGKSRSQKTGR------SHFKS 120

Query: 121 CVKECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHP 180
            ++EC+E+LE  G+P ++A GEAEA+CA LN  G VD C+T D DAFL+GA+ V ++F  
Sbjct: 121 VLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTM 180

Query: 181 NSKASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVG 240
           N+K                             ++CY +S I++ LGL+R  L+ +++L+G
Sbjct: 181 NTK--------------------------DPHVDCYTISSIKSKLGLDRDALVGLAVLLG 240

Query: 241 NDHDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETN 300
            D+   GV GVG + A++ +Q +    +L +        N  ++            S   
Sbjct: 241 CDYLPKGVPGVGKEQALKLLQIFKGQSLLQRF-------NQWIEDPC--------YSVPQ 280

Query: 301 SRKIKCSHCSFCGHPGSKRAHVKFPCEYC 328
           S   K  HCS C HPGS + H +  C  C
Sbjct: 301 SAPKKVVHCSVCSHPGSPKDHERNGCILC 280

[Close]

BLAST of Cla006930 vs. Swiss-Prot
Match: GENL2_ORYSJ (Flap endonuclease GEN-like 2 OS=Oryza sativa subsp. japonica GN=SEND1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-27
Identity = 125/439 (28.47%), Postives = 189/439 (43.05%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSP---HLRLTFF 60
           MGV  + WD+L+   +      L+NK+V VDLS W+VQ  +A ++ A +    +L+  F 
Sbjct: 1   MGVK-NLWDILESCKKKLPLHHLQNKKVCVDLSCWLVQMYSANRSPAFAKDKVYLKNLFH 60

Query: 61  RTITLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLS-GIDTSDLQKVEDRISVDRNR-- 120
           R   L A      +FV DG    LK  T   R   +S     SD       IS+ RN+  
Sbjct: 61  RIRALLA-LNCTLLFVTDGAIPSLKLATYRRRLGSISHAAKESDQPNSHPSISLRRNKGS 120

Query: 121 KFAKCVKECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIK 180
           +F+  +KE   L    G+P L+   EAEA CA L+ + L D C T+DSDAFLFGA+ V +
Sbjct: 121 EFSCMIKEAKRLGMALGIPCLDGLEEAEAQCASLDLESLCDGCFTSDSDAFLFGARTVYR 180

Query: 181 SFHPNSKASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAIS 240
                      ++     YVI                 CY M DIE  LG  R  LI+++
Sbjct: 181 D----------VFIGEGGYVI-----------------CYEMEDIEKTLGFGRNSLISLA 240

Query: 241 LLVGNDHDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQS 300
           +L+G+D+  NGV G G +TA R V+   D+ IL+++          L +G++        
Sbjct: 241 VLLGSDYS-NGVNGFGPETACRLVKSVGDNLILDQI----------LSNGVKATRKCKGK 300

Query: 301 SETNSRKIKCSHCSFC------GHPGSKR----AHVKFPCEYCDVRH-----GDGCIKKP 360
           +  N     C   S C         G  R    A+++  C   D        G     +P
Sbjct: 301 NSGNKVDDMCPKASSCEVGMTQDSDGQFRDVINAYLEPKCHSPDSEAVQRVCGQHPFLRP 360

Query: 361 DGFKCNCSSCDMWEPSYTRQRMLPMLSTIFLREMAN----------NPIQTLLYGQYEFD 409
              K  C     W P  T Q +LP ++   LR  ++           P+ + +       
Sbjct: 361 QLQKI-CEEYFDWSPEKTDQYILPKIAERELRRFSDLRSASSALGIKPLLSEIPVPCPVL 398

[Close]

BLAST of Cla006930 vs. TrEMBL
Match: A0A0A0KEK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G074590 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.0e-172
Identity = 303/351 (86.32%), Postives = 313/351 (89.17%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGGHFWDLLKP+ARTEGFDFLRNKRVAVDLSFWIVQHETAIK++ARSPHLRLTFFRTI
Sbjct: 1   MGVGGHFWDLLKPNARTEGFDFLRNKRVAVDLSFWIVQHETAIKSTARSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
           TLFAKFGAFPVFVVDGTPSPLKSK RIARF RLSG+DTSDL KVEDRISV RNRKFAKCV
Sbjct: 61  TLFAKFGAFPVFVVDGTPSPLKSKARIARFSRLSGVDTSDLPKVEDRISVHRNRKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELN+KG VDACITADSDAFLFGAKCVIKSF+PNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNQKGFVDACITADSDAFLFGAKCVIKSFNPNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EPLECYFMSDIEAALG NR HLIAISLLVGND
Sbjct: 181 K---------------------------EPLECYFMSDIEAALGFNRNHLIAISLLVGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HDLNGVQGVGLDTAV FVQDYTDDEILNKLYEIGN+D T LQSGLELVNNYGQSSETNSR
Sbjct: 241 HDLNGVQGVGLDTAVCFVQDYTDDEILNKLYEIGNEDTTPLQSGLELVNNYGQSSETNSR 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDM 352
           KIKCSHCSFCGHPGSKRAH+KFPCEYCDV HG+GCIKKPDGFKCNCSSC+M
Sbjct: 301 KIKCSHCSFCGHPGSKRAHIKFPCEYCDVSHGEGCIKKPDGFKCNCSSCNM 324

[Close]

BLAST of Cla006930 vs. TrEMBL
Match: A0A0A0KEK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G074590 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.9e-57
Identity = 115/133 (86.47%), Postives = 120/133 (90.23%), Query Frame = 1


Query: 352 WEPSYTRQRMLPMLSTIFLREMANNPIQTLLYGQYEFDSILREKIRYGHPFYVVKWKKAV 411
           WEPSY RQRMLPMLSTIFLREMANNP QTLLYGQYEFDSILREKIRYGH FYVVKWKKAV
Sbjct: 395 WEPSYIRQRMLPMLSTIFLREMANNPTQTLLYGQYEFDSILREKIRYGHSFYVVKWKKAV 454

Query: 412 PTLGNVIYEGSSEGFGTGPEDAIDVDEAVDLTDESDSPKIHIQDGFSFLLTDENMDLVGA 471
           P + +  YE SS  FGTGP+DAIDVDEAV+LTDESDSPKIHIQDG SFLLTDENM+LV A
Sbjct: 455 PAISST-YEDSSGEFGTGPDDAIDVDEAVNLTDESDSPKIHIQDGCSFLLTDENMELVAA 514

Query: 472 AYPEQTAKFLQEK 485
           AYPEQ AKFLQEK
Sbjct: 515 AYPEQAAKFLQEK 526

HSP 2 Score: 489.6 bits (1259), Expect = 6.5e-135
Identity = 269/519 (51.83%), Postives = 337/519 (64.93%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGG+FWDLLKP+AR EGFDFL+NKRVAVDLSFWIVQHETAIKA  R PHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPYARNEGFDFLKNKRVAVDLSFWIVQHETAIKAHVRKPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
            LF+KFGAFPVF+VDGTPSPLKS+ RIAR+FR SGI+ + L  V + +S +RNR F+  V
Sbjct: 61  NLFSKFGAFPVFIVDGTPSPLKSQARIARYFRSSGIELASLP-VPEGVSAERNRLFSSRV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVEL+EL G+PVL+AKGEAEALCA+LN +G VDAC+TADSDAFLFGAKC+IK F PNS
Sbjct: 121 QECVELVELLGMPVLKAKGEAEALCAQLNSEGHVDACMTADSDAFLFGAKCIIKCFCPNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EP ECY MSDIEA LGL RKHLIAISLL GND
Sbjct: 181 K---------------------------EPFECYSMSDIEAGLGLKRKHLIAISLLAGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HD+NGV+G+G+D A+RFV+ +++D+ILN+L+EIG  + +Q+   +++  +      + +R
Sbjct: 241 HDMNGVRGIGVDYALRFVKAFSEDDILNRLHEIGKGNTSQIPICIKVEEDMDMGESSPNR 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDM--------- 360
           K    HCSFCGHPGSK  HVKF CEYC  +  +GC +KPDGFKC+C SC M         
Sbjct: 301 KQP--HCSFCGHPGSKTDHVKFSCEYCVTKDDEGCKQKPDGFKCDCFSCGMNRRHKEQKR 360

Query: 361 ---W----------EPSYTRQRMLPM----------LSTIFLREMANNPIQTLLYGQYEF 420
              W          EP++ ++ ++ M          L   + +      I  L + Q+  
Sbjct: 361 LENWHTKICHKIAQEPNFPKEEIIDMYLCNDNGSDNLHITWGKPNVEMLIDFLNFHQHWE 420

Query: 421 DSILREKI--RYGHPFYVVKWKKAVPTLGNVIYEGSS-EGFGTGPEDAIDVDEAVDLTDE 480
            S +R  +       F     K    TL    YE  S E   +  +D  ++DE +DL D+
Sbjct: 421 PSYIRRTMFPMMSTIFLRDMTKTTAETLLFGQYEFDSIEQESSVQQDVRELDETLDLLDD 480

Query: 481 SDSPKIHIQDGFSFLLTDENMDLVGAAYPEQTAKFLQEK 485
            D P IH  DG SFLLTDENMDLVGAA+P +  +F QE+
Sbjct: 481 GDVPVIHEDDGCSFLLTDENMDLVGAAFPAEVKRFWQEQ 489

[Close]

BLAST of Cla006930 vs. TrEMBL
Match: M5XMP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015861mg PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 7.7e-128
Identity = 234/351 (66.67%), Postives = 269/351 (76.64%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGG FWDLLKP+AR EGFDFLRNKRVAVDLSFW+VQHETAIK  ARSPHLRLTFFRTI
Sbjct: 1   MGVGGKFWDLLKPYARHEGFDFLRNKRVAVDLSFWLVQHETAIKDRARSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
            LF+KFGAFPVFVVDG+PSPLKS+ RIARFFR SGID+S L    D  SV+RN  F K +
Sbjct: 61  NLFSKFGAFPVFVVDGSPSPLKSEARIARFFRSSGIDSSSLPVAGDGASVERNSTFTKYI 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVELLEL G+PV++AKGEAEALCA+L+ +G VDACIT+DSDAFLFGAKCVIK+F  NS
Sbjct: 121 QECVELLELLGMPVVKAKGEAEALCAQLDAEGHVDACITSDSDAFLFGAKCVIKTFQSNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EP ECY+MSDIEA LGL RKHLIAISLLVGND
Sbjct: 181 K---------------------------EPFECYYMSDIEAGLGLKRKHLIAISLLVGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           + LNGVQG+GLDTA+R  Q +++DEILN+L EIGN D + LQ  +  V++   S + +S 
Sbjct: 241 YYLNGVQGIGLDTALRIAQTFSEDEILNRLREIGNGDASLLQGEIRSVDDSVPSPDGSSL 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDM 352
           K K SHCSFCGHPGSKR H K  CEYC    G+GC+KK +GFKC+CSSCDM
Sbjct: 301 KRKFSHCSFCGHPGSKRTHFKSSCEYCSSTMGEGCMKKSEGFKCSCSSCDM 324

[Close]

BLAST of Cla006930 vs. TrEMBL
Match: M5XMP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015861mg PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 3.0e-39
Identity = 85/134 (63.43%), Postives = 103/134 (76.87%), Query Frame = 1


Query: 351 MWEPSYTRQRMLPMLSTIFLREMANNPIQTLLYGQYEFDSILREKIRYGHPFYVVKWKKA 410
           +WEPSY R+RMLPMLSTIFLREMA +P+++LLYGQYEFDSI R KIRYGH FYVVKWKK+
Sbjct: 395 LWEPSYIRRRMLPMLSTIFLREMAKDPLKSLLYGQYEFDSIDRLKIRYGHQFYVVKWKKS 454

Query: 411 VPTLGNVIYEGSSEGFGTGPEDAIDVDEAVDLTDESDSPKIHIQDGFSFLLTDENMDLVG 470
            P+LG V      E      +D ++VDE+++  DESD P I I +G  FLLTDENMDLV 
Sbjct: 455 APSLGCVSCTVPPEESDVQQDDVMEVDESINPFDESDVPTIDINNGCCFLLTDENMDLVH 514

Query: 471 AAYPEQTAKFLQEK 485
           AA+PE+  +FLQEK
Sbjct: 515 AAFPEEVDRFLQEK 528

HSP 2 Score: 465.3 bits (1196), Expect = 1.3e-127
Identity = 230/350 (65.71%), Postives = 265/350 (75.71%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGG FWDLLKP+AR +G DFLR+KRVAVDLS+WIVQHETAIK+  R PH+RLTFFRTI
Sbjct: 1   MGVGGKFWDLLKPYARPQGPDFLRDKRVAVDLSYWIVQHETAIKSYVRKPHVRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
            LF+KFGAFPVFVVDG PSPLKS+ RIARFFR SGID S L   E+ +SV+RNR F+KCV
Sbjct: 61  NLFSKFGAFPVFVVDGIPSPLKSRARIARFFRSSGIDVSSLPVAEEGVSVERNRVFSKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVELLELFG+PVL A GEAEALCA+LNR+GLVDACITADSDAFLFGA+CVIK   PN+
Sbjct: 121 EECVELLELFGMPVLTANGEAEALCAQLNREGLVDACITADSDAFLFGAECVIKCIRPNT 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EP ECY MSDIEA LGL RKHLIAISLLVGND
Sbjct: 181 K---------------------------EPFECYQMSDIEAGLGLKRKHLIAISLLVGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HDL+GVQG+G+DTA+RFVQ +++DEILN L+EIG  +    Q   ++V ++    + +  
Sbjct: 241 HDLSGVQGIGVDTALRFVQTFSEDEILNGLHEIGKGNTHIFQCVSKVVEHFMLDEDEDLA 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCD 351
           K K SHCSFCGHPGSKRAH    CEYC    G+GC +KP GFKCNC SCD
Sbjct: 301 KSKTSHCSFCGHPGSKRAHFNSSCEYCGTEDGEGCTRKPKGFKCNCFSCD 323

[Close]

BLAST of Cla006930 vs. TrEMBL
Match: A0A067JXU1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14468 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.9e-33
Identity = 74/134 (55.22%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 351 MWEPSYTRQRMLPMLSTIFLREMANNPIQTLLYGQYEFDSILREKIRYGHPFYVVKWKKA 410
           +WEPSY RQRMLPMLSTI+LR+M  NP +++LYGQYEFDSI R KIRYGH  YV+KWKKA
Sbjct: 394 LWEPSYIRQRMLPMLSTIYLRQMVANPGKSMLYGQYEFDSIQRVKIRYGHQCYVIKWKKA 453

Query: 411 VPTLGNVIYEGSSEGFGTGPEDAIDVDEAVDLTDESDSPKIHIQDGFSFLLTDENMDLVG 470
             T+ + I+  + E      ED I++DE++D  ++   P+ ++ DG  FLLTDENMDLV 
Sbjct: 454 AFTVCSDIHTKTVEESDNQQEDIIEIDESMDELEDRSIPQSYVDDGNWFLLTDENMDLVR 513

Query: 471 AAYPEQTAKFLQEK 485
            A+P+   +FL EK
Sbjct: 514 GAFPDAVDRFLYEK 527

HSP 2 Score: 463.0 bits (1190), Expect = 6.5e-127
Identity = 229/360 (63.61%), Postives = 268/360 (74.44%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MG+GGHFW+LLKP+AR EGFDFLRNKRVAVDLS+WIVQHETAIKA  R PHLRLTFFRTI
Sbjct: 1   MGIGGHFWELLKPYARHEGFDFLRNKRVAVDLSYWIVQHETAIKAHTRDPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
            LF+KFGAFPVFV+DGTPSPLKS+ RI RFFR SGID S L   E  ISV RN+ F KCV
Sbjct: 61  NLFSKFGAFPVFVLDGTPSPLKSQARIQRFFRASGIDLSSLPVAEGGISVQRNQAFKKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVELLEL G+PVL+AKGEAEALCA+LNR+G VDACITADSDAFLFGAKCVIK  HPNS
Sbjct: 121 QECVELLELLGMPVLKAKGEAEALCAQLNREGHVDACITADSDAFLFGAKCVIKRLHPNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EP ECY M DIEA LGL RK LIAISLLVGND
Sbjct: 181 K---------------------------EPFECYHMVDIEAGLGLQRKRLIAISLLVGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HD+NGV+G+G+DTA+RFV+ +++DEILN+L EIG  D   +   L    +   S E    
Sbjct: 241 HDMNGVRGIGVDTALRFVKTFSEDEILNRLREIGRGDKIVIPGYLNSEGDSVHSLEEAYH 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDMWEPSYTRQR 360
           K K  HCS CGHPGS++AH+K  C+YC    G+GC+KKP GFKC+CS+C++ + +  +Q+
Sbjct: 301 KPKLLHCSLCGHPGSRKAHLKSACQYCSSVTGEGCLKKPQGFKCHCSACNLEQKAKEQQK 333

[Close]

BLAST of Cla006930 vs. NCBI nr
Match: gi|659120377|ref|XP_008460162.1| (PREDICTED: flap endonuclease GEN-like 1 [Cucumis melo])

HSP 1 Score: 618.2 bits (1593), Expect = 1.7e-173
Identity = 304/350 (86.86%), Postives = 313/350 (89.43%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGGHFWDLLKP+ARTEGFDFLRNKRVAVDLSFWIVQHETAIK+++RSPHLRLTFFRTI
Sbjct: 1   MGVGGHFWDLLKPNARTEGFDFLRNKRVAVDLSFWIVQHETAIKSTSRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
           TLFAKFGAFPVFVVDGTPSPLKSK RIARFFRLSGIDTSDL KVEDRISV RNRKFAKCV
Sbjct: 61  TLFAKFGAFPVFVVDGTPSPLKSKARIARFFRLSGIDTSDLPKVEDRISVHRNRKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELN+KG VDACITADSDAFLFGAKCVIKS HPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNQKGFVDACITADSDAFLFGAKCVIKSIHPNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EPLECYFMSDIEAALGLNR HLIAISLLVGND
Sbjct: 181 K---------------------------EPLECYFMSDIEAALGLNRNHLIAISLLVGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HDLNGVQGVGLDTAVRFVQDYTDD+ILNKLYEIGN+D T LQSG ELVNNYGQSSET+SR
Sbjct: 241 HDLNGVQGVGLDTAVRFVQDYTDDQILNKLYEIGNEDTTALQSGFELVNNYGQSSETDSR 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCD 351
           KIKCSHCSFCGHPGSKRAHVKFPCEYCDV HG+GCIKKPDGFKCNCSSCD
Sbjct: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVSHGEGCIKKPDGFKCNCSSCD 323

[Close]

BLAST of Cla006930 vs. NCBI nr
Match: gi|659120377|ref|XP_008460162.1| (PREDICTED: flap endonuclease GEN-like 1 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 9.8e-60
Identity = 117/133 (87.97%), Postives = 122/133 (91.73%), Query Frame = 1


Query: 352 WEPSYTRQRMLPMLSTIFLREMANNPIQTLLYGQYEFDSILREKIRYGHPFYVVKWKKAV 411
           WEPSY RQRMLPMLSTIFLREMANNPIQTLL+GQYEFDSILREKIR+GH FYVVKWKKAV
Sbjct: 395 WEPSYIRQRMLPMLSTIFLREMANNPIQTLLFGQYEFDSILREKIRFGHSFYVVKWKKAV 454

Query: 412 PTLGNVIYEGSSEGFGTGPEDAIDVDEAVDLTDESDSPKIHIQDGFSFLLTDENMDLVGA 471
           P + NV+YE S   FGTGPEDAIDVDEAVDLTDE DSPKIHIQDG SFLLTDENM+LVGA
Sbjct: 455 PAISNVMYEDSLGEFGTGPEDAIDVDEAVDLTDEFDSPKIHIQDGCSFLLTDENMELVGA 514

Query: 472 AYPEQTAKFLQEK 485
           AYPEQ AKFLQEK
Sbjct: 515 AYPEQAAKFLQEK 527

HSP 2 Score: 615.1 bits (1585), Expect = 1.5e-172
Identity = 303/351 (86.32%), Postives = 313/351 (89.17%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGGHFWDLLKP+ARTEGFDFLRNKRVAVDLSFWIVQHETAIK++ARSPHLRLTFFRTI
Sbjct: 1   MGVGGHFWDLLKPNARTEGFDFLRNKRVAVDLSFWIVQHETAIKSTARSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
           TLFAKFGAFPVFVVDGTPSPLKSK RIARF RLSG+DTSDL KVEDRISV RNRKFAKCV
Sbjct: 61  TLFAKFGAFPVFVVDGTPSPLKSKARIARFSRLSGVDTSDLPKVEDRISVHRNRKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELN+KG VDACITADSDAFLFGAKCVIKSF+PNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNQKGFVDACITADSDAFLFGAKCVIKSFNPNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EPLECYFMSDIEAALG NR HLIAISLLVGND
Sbjct: 181 K---------------------------EPLECYFMSDIEAALGFNRNHLIAISLLVGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HDLNGVQGVGLDTAV FVQDYTDDEILNKLYEIGN+D T LQSGLELVNNYGQSSETNSR
Sbjct: 241 HDLNGVQGVGLDTAVCFVQDYTDDEILNKLYEIGNEDTTPLQSGLELVNNYGQSSETNSR 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDM 352
           KIKCSHCSFCGHPGSKRAH+KFPCEYCDV HG+GCIKKPDGFKCNCSSC+M
Sbjct: 301 KIKCSHCSFCGHPGSKRAHIKFPCEYCDVSHGEGCIKKPDGFKCNCSSCNM 324

[Close]

BLAST of Cla006930 vs. NCBI nr
Match: gi|449472478|ref|XP_004153607.1| (PREDICTED: flap endonuclease GEN-like 1 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 2.7e-57
Identity = 115/133 (86.47%), Postives = 120/133 (90.23%), Query Frame = 1


Query: 352 WEPSYTRQRMLPMLSTIFLREMANNPIQTLLYGQYEFDSILREKIRYGHPFYVVKWKKAV 411
           WEPSY RQRMLPMLSTIFLREMANNP QTLLYGQYEFDSILREKIRYGH FYVVKWKKAV
Sbjct: 395 WEPSYIRQRMLPMLSTIFLREMANNPTQTLLYGQYEFDSILREKIRYGHSFYVVKWKKAV 454

Query: 412 PTLGNVIYEGSSEGFGTGPEDAIDVDEAVDLTDESDSPKIHIQDGFSFLLTDENMDLVGA 471
           P + +  YE SS  FGTGP+DAIDVDEAV+LTDESDSPKIHIQDG SFLLTDENM+LV A
Sbjct: 455 PAISST-YEDSSGEFGTGPDDAIDVDEAVNLTDESDSPKIHIQDGCSFLLTDENMELVAA 514

Query: 472 AYPEQTAKFLQEK 485
           AYPEQ AKFLQEK
Sbjct: 515 AYPEQAAKFLQEK 526

HSP 2 Score: 489.6 bits (1259), Expect = 9.3e-135
Identity = 269/519 (51.83%), Postives = 337/519 (64.93%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGG+FWDLLKP+AR EGFDFL+NKRVAVDLSFWIVQHETAIKA  R PHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPYARNEGFDFLKNKRVAVDLSFWIVQHETAIKAHVRKPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
            LF+KFGAFPVF+VDGTPSPLKS+ RIAR+FR SGI+ + L  V + +S +RNR F+  V
Sbjct: 61  NLFSKFGAFPVFIVDGTPSPLKSQARIARYFRSSGIELASLP-VPEGVSAERNRLFSSRV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVEL+EL G+PVL+AKGEAEALCA+LN +G VDAC+TADSDAFLFGAKC+IK F PNS
Sbjct: 121 QECVELVELLGMPVLKAKGEAEALCAQLNSEGHVDACMTADSDAFLFGAKCIIKCFCPNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EP ECY MSDIEA LGL RKHLIAISLL GND
Sbjct: 181 K---------------------------EPFECYSMSDIEAGLGLKRKHLIAISLLAGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HD+NGV+G+G+D A+RFV+ +++D+ILN+L+EIG  + +Q+   +++  +      + +R
Sbjct: 241 HDMNGVRGIGVDYALRFVKAFSEDDILNRLHEIGKGNTSQIPICIKVEEDMDMGESSPNR 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDM--------- 360
           K    HCSFCGHPGSK  HVKF CEYC  +  +GC +KPDGFKC+C SC M         
Sbjct: 301 KQP--HCSFCGHPGSKTDHVKFSCEYCVTKDDEGCKQKPDGFKCDCFSCGMNRRHKEQKR 360

Query: 361 ---W----------EPSYTRQRMLPM----------LSTIFLREMANNPIQTLLYGQYEF 420
              W          EP++ ++ ++ M          L   + +      I  L + Q+  
Sbjct: 361 LENWHTKICHKIAQEPNFPKEEIIDMYLCNDNGSDNLHITWGKPNVEMLIDFLNFHQHWE 420

Query: 421 DSILREKI--RYGHPFYVVKWKKAVPTLGNVIYEGSS-EGFGTGPEDAIDVDEAVDLTDE 480
            S +R  +       F     K    TL    YE  S E   +  +D  ++DE +DL D+
Sbjct: 421 PSYIRRTMFPMMSTIFLRDMTKTTAETLLFGQYEFDSIEQESSVQQDVRELDETLDLLDD 480

Query: 481 SDSPKIHIQDGFSFLLTDENMDLVGAAYPEQTAKFLQEK 485
            D P IH  DG SFLLTDENMDLVGAA+P +  +F QE+
Sbjct: 481 GDVPVIHEDDGCSFLLTDENMDLVGAAFPAEVKRFWQEQ 489

[Close]

BLAST of Cla006930 vs. NCBI nr
Match: gi|1009162268|ref|XP_015899347.1| (PREDICTED: flap endonuclease GEN-like 1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 237/351 (67.52%), Postives = 274/351 (78.06%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MG GG FWDLLKP+AR EGFDFLRNKRVAVDLSFWIVQHETAIK +AR+PHLRL FFRTI
Sbjct: 1   MGFGGKFWDLLKPYARNEGFDFLRNKRVAVDLSFWIVQHETAIKGNARNPHLRLIFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
           +LFAKFGAFPVFVVDGTPSPLKSK RIARF+R SGID S L   +  +SVDRN KF+KCV
Sbjct: 61  SLFAKFGAFPVFVVDGTPSPLKSKARIARFYRFSGIDLSSLPAADYGVSVDRNHKFSKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVELLELFG+PVL+AKGEAEALCA+L  +G VDACIT+DSDAFL+GAKCVIK F PNS
Sbjct: 121 QECVELLELFGMPVLKAKGEAEALCAQLESEGHVDACITSDSDAFLYGAKCVIKCFRPNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EP ECY MS+IEA LGL RKHLIAISLLVGND
Sbjct: 181 K---------------------------EPFECYHMSEIEAGLGLKRKHLIAISLLVGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HDLNGVQG+GLDTAVRFVQ++ +DEILN+L+EI + D +  + G++  ++   SS+    
Sbjct: 241 HDLNGVQGIGLDTAVRFVQNFGEDEILNRLHEISSGDTSLFKFGMKSADDLLSSSDEILL 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDM 352
           + KCSHCSFCGHPG+KR H K  CEYC  + GD C+KKP+GFKC+C +CDM
Sbjct: 301 RTKCSHCSFCGHPGNKRDHFKSSCEYCSTKIGDACLKKPEGFKCDCLACDM 324

[Close]

BLAST of Cla006930 vs. NCBI nr
Match: gi|1009162268|ref|XP_015899347.1| (PREDICTED: flap endonuclease GEN-like 1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 80/134 (59.70%), Postives = 100/134 (74.63%), Query Frame = 1


Query: 351 MWEPSYTRQRMLPMLSTIFLREMANNPIQTLLYGQYEFDSILREKIRYGHPFYVVKWKKA 410
           MWEPSY RQ +LPMLSTI+LREMA  P+++LL+ QYEFDSI R ++RYGH FY++KWKKA
Sbjct: 395 MWEPSYIRQSILPMLSTIYLREMAAEPVKSLLHDQYEFDSIDRIRMRYGHQFYIIKWKKA 454

Query: 411 VPTLGNVIYEGSSEGFGTGPEDAIDVDEAVDLTDESDSPKIHIQDGFSFLLTDENMDLVG 470
           VP    V Y   SE      +D IDVDE+++  DE D PKIH+  G  FLLTDENM+LV 
Sbjct: 455 VPARSGVTYATPSEE-SNSQDDVIDVDESINQLDELDVPKIHVDGGCHFLLTDENMELVQ 514

Query: 471 AAYPEQTAKFLQEK 485
           AA+P++  +FLQEK
Sbjct: 515 AAFPQEVDRFLQEK 527

HSP 2 Score: 473.0 bits (1216), Expect = 9.0e-130
Identity = 234/351 (66.67%), Postives = 269/351 (76.64%), Query Frame = 1


Query: 1   MGVGGHFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASARSPHLRLTFFRTI 60
           MGVGG FWDLLKP+AR EGFDFLRNKRVAVDLSFWIVQHE AIK  ARSPHLRLTFFRTI
Sbjct: 1   MGVGGKFWDLLKPYARNEGFDFLRNKRVAVDLSFWIVQHEAAIKDRARSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVVDGTPSPLKSKTRIARFFRLSGIDTSDLQKVEDRISVDRNRKFAKCV 120
            LF+KFGAFPVFV+DGTPSPLKS+ RIARFFR SGID+S L   E+ +S +RN  F K +
Sbjct: 61  NLFSKFGAFPVFVLDGTPSPLKSQARIARFFRSSGIDSSSLPVAENGVSAERNSTFTKYI 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGLVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVELLEL G+PVL+AKGEAEALCA+LN  G VDACIT+DSDAFLFGAKCVIK+F  NS
Sbjct: 121 QECVELLELLGMPVLKAKGEAEALCAQLNGDGHVDACITSDSDAFLFGAKCVIKTFRSNS 180

Query: 181 KASTPIYTSLLFYVISFLPFSLGYHHMQEPLECYFMSDIEAALGLNRKHLIAISLLVGND 240
           K                           EP ECY+MSDIEA LGL R HLIA+SLL GND
Sbjct: 181 K---------------------------EPFECYYMSDIEAGLGLKRNHLIALSLLAGND 240

Query: 241 HDLNGVQGVGLDTAVRFVQDYTDDEILNKLYEIGNKDNTQLQSGLELVNNYGQSSETNSR 300
           HDLNGVQG+GLDTA+RF Q +++DEILN+L EIGN D +  Q G++ V++   S + +  
Sbjct: 241 HDLNGVQGIGLDTALRFAQTFSEDEILNRLCEIGNGDASLFQGGMKSVDDSVPSLDESPS 300

Query: 301 KIKCSHCSFCGHPGSKRAHVKFPCEYCDVRHGDGCIKKPDGFKCNCSSCDM 352
           K K SHCSFCGHPGSKRAH K  CE+C    G+GC+KK +GFKC+CSSCDM
Sbjct: 301 KTKFSHCSFCGHPGSKRAHFKSSCEFCSNAVGEGCMKKSEGFKCSCSSCDM 324

The following BLAST results are available for this feature:

BLAST of Cla006930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GENL1_ARATH	2.2e-112	58.45	Flap endonuclease GEN-like 1 OS=Arabidopsis thaliana GN=GEN1 PE=2 SV=3	[more]
GENL1_ORYSJ	3.1e-98	52.51	Flap endonuclease GEN-like 1 OS=Oryza sativa subsp. japonica GN=RAD PE=2 SV=1	[more]
GEN_HUMAN	1.7e-35	32.13	Flap endonuclease GEN homolog 1 OS=Homo sapiens GN=GEN1 PE=1 SV=2	[more]
GEN_MOUSE	8.4e-35	31.31	Flap endonuclease GEN homolog 1 OS=Mus musculus GN=Gen1 PE=1 SV=2	[more]
GENL2_ORYSJ	1.3e-27	28.47	Flap endonuclease GEN-like 2 OS=Oryza sativa subsp. japonica GN=SEND1 PE=2 SV=1	[more]

BLAST of Cla006930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEK8_CUCSA	1.0e-172	86.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G074590 PE=4 SV=1	[more]
A0A0A0KEK8_CUCSA	1.9e-57	86.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G074590 PE=4 SV=1	[more]
M5XMP6_PRUPE	7.7e-128	66.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015861mg PE=4 SV=1	[more]
M5XMP6_PRUPE	3.0e-39	63.43	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015861mg PE=4 SV=1	[more]
A0A067JXU1_JATCU	1.9e-33	55.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14468 PE=4 SV=1	[more]

BLAST of Cla006930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120377\|ref\|XP_008460162.1\|	1.7e-173	86.86	PREDICTED: flap endonuclease GEN-like 1 [Cucumis melo]	[more]
gi\|659120377\|ref\|XP_008460162.1\|	9.8e-60	87.97	PREDICTED: flap endonuclease GEN-like 1 [Cucumis melo]	[more]
gi\|449472478\|ref\|XP_004153607.1\|	2.7e-57	86.47	PREDICTED: flap endonuclease GEN-like 1 [Cucumis sativus]	[more]
gi\|1009162268\|ref\|XP_015899347.1\|	1.3e-133	67.52	PREDICTED: flap endonuclease GEN-like 1 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009162268\|ref\|XP_015899347.1\|	1.8e-37	59.70	PREDICTED: flap endonuclease GEN-like 1 isoform X1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR006084	XPG/Rad2
IPR006085	XPG_DNA_repair_N
IPR006086	XPG-I_dom
IPR011006	CheY-like_superfamily
IPR020045	DNA_polI_H3TH

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system
GO:0006281	DNA repair

Vocabulary: **Molecular Function**
Term	Definition
GO:0004518	nuclease activity
GO:0003677	DNA binding
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0006308	DNA catabolic process
biological_process	GO:0009555	pollen development
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0048256	flap endonuclease activity
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0004519	endonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla006930	Cla006930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 491..590 score: 2.
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 489..595 score: 3.
IPR001789	Signal transduction response regulator, receiver domain	PROFILE	PS50110	RESPONSE_REGULATORY	coord: 490..608 score: 23
IPR006084	XPG/Rad2 endonuclease	PRINTS	PR00853	XPGRADSUPER	coord: 25..39 score: 1.2E-19coord: 148..168 score: 1.2E-19coord: 127..144 score: 1.2E-19coord: 70..89 score: 1.2
IPR006084	XPG/Rad2 endonuclease	PANTHER	PTHR11081	XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY	coord: 2..182 score: 2.7E-162coord: 208..484 score: 2.7E
IPR006085	XPG N-terminal	PFAM	PF00752	XPG_N	coord: 1..87 score: 2.
IPR006085	XPG N-terminal	SMART	SM00485	xpgn3	coord: 1..96 score: 9.
IPR006086	XPG-I domain	PFAM	PF00867	XPG_I	coord: 129..240 score: 6.9
IPR006086	XPG-I domain	SMART	SM00484	xpgineu	coord: 128..204 score: 2.4
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 490..588 score: 1.57
IPR020045	5'-3' exonuclease, C-terminal domain	unknown	SSF47807	5' to 3' exonuclease, C-terminal subdomain	coord: 225..272 score: 3.8
None	No IPR available	GENE3D	G3DSA:1.10.150.20		coord: 225..271 score: 5.
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 489..588 score: 3.0
None	No IPR available	PANTHER	PTHR11081:SF23	FLAP ENDONUCLEASE GEN HOMOLOG 1	coord: 2..182 score: 2.7E-162coord: 208..484 score: 2.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla006930	Cla97C06G109370	Watermelon (97103) v2	wmwmbB407
Cla006930	Csa6G074580	Cucumber (Chinese Long) v2	cuwmB537
Cla006930	MELO3C022527	Melon (DHL92) v3.5.1	mewmB140
Cla006930	ClCG05G007790	Watermelon (Charleston Gray)	wcgwmB314
Cla006930	ClCG06G000110	Watermelon (Charleston Gray)	wcgwmB345
Cla006930	CSPI06G05540	Wild cucumber (PI 183967)	cpiwmB556
Cla006930	Cucsa.363110	Cucumber (Gy14) v1	cgywmB666
Cla006930	CmaCh08G009340	Cucurbita maxima (Rimu)	cmawmB874
Cla006930	CmoCh08G009030	Cucurbita moschata (Rifu)	cmowmB862
Cla006930	Lsi09G019310	Bottle gourd (USVL1VR-Ls)	lsiwmB041
Cla006930	Cp4.1LG17g02430	Cucurbita pepo (Zucchini)	cpewmB342
Cla006930	CsGy6G005480	Cucumber (Gy14) v2	cgybwmB501
Cla006930	MELO3C022527.2	Melon (DHL92) v3.6.1	medwmB138
Cla006930	Carg11105	Silver-seed gourd	carwmB1079
Cla006930	CsaV3_6G005850	Cucumber (Chinese Long) v3	cucwmB562
Cla006930	BhiUN123G52	Wax gourd	wgowmB650

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla006930	Cla006210	Watermelon (97103) v1	wmwmB140

The following block(s) are covering this gene:


Gene	Organism	Block
Cla006930	Watermelon (97103) v1	wmwmB137
Cla006930	Cucumber (Gy14) v1	cgywmB484
Cla006930	Cucurbita maxima (Rimu)	cmawmB251
Cla006930	Cucurbita maxima (Rimu)	cmawmB326
Cla006930	Cucurbita maxima (Rimu)	cmawmB359
Cla006930	Cucurbita maxima (Rimu)	cmawmB810
Cla006930	Cucurbita moschata (Rifu)	cmowmB241
Cla006930	Cucurbita moschata (Rifu)	cmowmB320
Cla006930	Cucurbita moschata (Rifu)	cmowmB354
Cla006930	Cucurbita moschata (Rifu)	cmowmB801
Cla006930	Melon (DHL92) v3.5.1	mewmB484
Cla006930	Watermelon (Charleston Gray)	wcgwmB309
Cla006930	Cucumber (Chinese Long) v2	cuwmB276
Cla006930	Cucurbita pepo (Zucchini)	cpewmB162
Cla006930	Cucurbita pepo (Zucchini)	cpewmB625
Cla006930	Cucurbita pepo (Zucchini)	cpewmB854
Cla006930	Bottle gourd (USVL1VR-Ls)	lsiwmB385
Cla006930	Cucumber (Gy14) v2	cgybwmB259
Cla006930	Melon (DHL92) v3.6.1	medwmB473
Cla006930	Silver-seed gourd	carwmB0220
Cla006930	Silver-seed gourd	carwmB0619
Cla006930	Cucumber (Chinese Long) v3	cucwmB285
Cla006930	Cucumber (Chinese Long) v3	cucwmB291
Cla006930	Watermelon (97103) v2	wmwmbB398