Cla006723 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla006723
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Nuclear RNA binding protein-like (AHRD V1 ***- Q38M48_SOLTU); contains Interpro domain(s) IPR006861 Hyaluronan/mRNA binding protein
Location	Chr6 : 3744927 .. 3749314 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCACAAATCCATTTGATTTGTTGGGAGATGACGACGCCGAGGACCCATCGCAGCTAATTGCCGCCAAGCATGCCGTCGCGGCGGCGCCTAAGAAAGGTTCTGATCATCCTCAGGCCAAACAGGCGGCTGCGGCAGCTAAATTGAACAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGGTTAGTTTCTTCTCTTTTTAATTGGAAGTTAATGATTTTCTAAATATCAGCGTTTGATTTTGATGATTGATCGTGTTGTTCTTTTTGCTTCCCTGTCTGGGTTGATTGGTTTTGTTGTAGTTTTGTTCTAGCTGTTTGTCCGCTTGTTTGCATGGTTACGTTGTTTGGGCCTACGGAATTGTGCGAAGTCTCTCTTGGCGACGTTTTTTTTTATATATATATATATATATATATATATATAGACACACGTAGGAGTGAGTGATTTTGAATTCAGTCAAAATGCTATAAGCTATAATTACTTTCTGCGATAGGGTTGTAGTAGGTAATAGCCGGCTGGGATGTAATGTGTATTCCACTATTCCCACAATCCAGGCCCTGCATTCCAGATTTATTTGCAATTCAGATAATATCCAATGACTTGTATGTTTGGAACATAAATGAAAGTAAATTATCAATACTTTGTTTTTGTTCTTTTTTTGTGGAAAATTTGAGTGTCAGCAATGGTGTTGTGATTTTTTAACGTACTAGTTCGTGAAATTTCTCTGTACACTGTTTAGTTAATTCTTTTCTTTTTTACTTATTATTCTATTTTCCTTTTGTCCATGGTAATCAAAAGAATTAGAATTATTTTGATAATTTAGGTACAAGTCTTTTATCAAGGAAGTGAGCTTTCATTGAGAAATATGAAAAAATGTACAAGGGCATACAAAAAACAAACCCTCCAAAAAGAGTCCCCAACCCCAATAATGAGTAAGGACCCAGACTAAGTTAGTAATCACAAAAAGCCTGATTAATGGATGTCCATAGTGGTGTTTGCTAGAACATTTAAACCTACAACTTGAAATACACTTAGAAGGCTGTGGTCTATACTTGCCCAGAATATCCTATGCTACATGAAGAAATGTCAACCATTTTGCTAAAATAGCCTCATTCCAGGTTGTCAATGCCTAAACCCTCCAGATCAACTAATTTCGACGCAACCTCCCCCACCCTTATCCACTCCTTCCCACAAGAATGGAGACCAACATACCAAGCATGGGAAGAAAGTAGATTGGGATCCAACTCAGCACTAATTGGATCAAAGTGCTTCCCCCTTAAAAAAAGGCCTTCTTCCGTGGTTTTGAATTTCTCTACCACAGGGTCCCGAAAAAGCAAACTATTTGGGATTTTACCTCCAAGGGAAGTCCAAGGTAGGAACAGGGAAGCTGACTCACCTCACAACCAACCAAATAAACCCAAGAGGACAACTTAGAAGGCTCACAATTTAACCAATGATGGAGCTTTTCTCTCTATTAATTTTAAGGCTTGAGATAGATTCAAAGAATGACAAGAAACCATTAATATTCGTGAAGGAATTATTCAATTGTTCTATATATATATTTTGATGAGATCCACTTGGTATAATTTATGCACAAGCTGAATTGCAATGTTTTGGTTGGTTCTTGATTTGTGATCTTTTGCATTATTTTGAAAGGTCGTTGTTTTCAATATTTACCTTGAAGAGGAATTGATGTATTAGATTTCTTCATATGATTTAGTGGTGGAAAATTCCATGTTTTCTAAAGAGGTCATGTTTTGGAGGAACAGCAAATATTTGCATGTATATTCAGATGGTGGGATGTTGTACAGAACTGGGTTGTCTTTTATTGCATTATTGTTTAATATTCCTGGTTCTTAATATAGAACTTGGAAGTCTGCAATCAATTTTTTATCCTATCTTAAGCGTAGCTTTGCCTTTTATCATATTGTCCATATTATGTTATAATTTATCAACAGCCTATTCCTTGTTCTATTGGGTTCTTATGAGTGTCCCACCCAATTGGTATGAAATATCCATTGGGTAACTGAAAGAGTGTTTTTTTTTTAATACTTTGAGTAGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGTGGACGTGGATATTGGCGAGGGCGTGGCAGTGGTGGCTTCAATCGTGAGTCTTCCAATAATGAGCACTCATTTAGTAGTAACCCTGAAGATGGAGAGACTATAAGGACAACAGAAAGGCGTGGTGGATATGGTGGACCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTTAATAATGGAGATTCTGTTGATGGTGAACGCCCTCGTGGTGTATTTGAACGCCACAGTGGGACTGGCCGAGGGTGAGTGTTCATTTATTTAAAAAATTCAGTTTACACAATTCTTCTGTATCTTCTGCTTTGTTTTGATATTTTCAGCATATTTTATGCCTTAGAAATGAATTCAAGCGTGAAGGGTCTGGGCGTGGAAACTGGGGAAGGTCAACTGACGAATTTCCTGAGTAAGTACATGTCTACGTTTTGGATGCTTCTGTATGTGGTTTGGTTTTCCTTTTCTTTTTTCTCCTATAATGTTTGGCGCTGGGGTGGGGGGAGCTCAGGAGGCGGACATTACTGGAAGTTTTTATGCATGTTCAAATCTTGTATGCTGAGAGGCTAGTTTGTTTTGCATACAGGGTTACAGAGGAAGTTAATGAATCTGAGAAGAAGTTAGGTGATGAGAAGCCCGTTCATGAGGATGATACTGCAGGTGTCAACATCGAGAGCTCTGCAAAAGAATCAGAGGAAAAAGAACCAGAAGACAAGGTTTGTGTCGTCAGGTTTTTTGGTAGACTTCACTTAAACCTGCAGCCTACCATTTCACTCGTCATTGGTTTTTCTTGTTGACTGAAAAGTAATTTGTAGTTTGGCTTGCTTCTCAAACAAATTGTATGGCAGTAATAGCCGAAGTTGTAGTAATAGGCTTGTTGGGCTTTGATTATGAAGTTCACTCTATGTTCAACATGATCTTGAATCTACCTTGTACTCTTTCTTTTGCCCTGATGCAGGAAATGACTCTGGAGGAGTATGAAAAATTGCTGGAGGAGAAAAGGAAGAGCCTTCTGGCATTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAGTTTGCATCCTTGCAACAGCTTTCAAGCAAAAAGGAAAACCAGGACGTCTTTATTAAATTGGTACACCATTTAATCTTCTTTTGGAGTTAAAATTATATATTGCTCTGATGACCCTTGGCTCCTTAGTATATTGGTCTATGGACTTGGACTTGGCCGCTTAATCTTCATTTGTTCCGTTTGTAGGGATCTGATAAGGATAAGCGAAAAGAAACTGCAGATAAGGAGGAGAGAACTAAGAAGGTATTCCCTCTTGTTTATTACTTGGTTTCTTGCCCACTACGTTGTTTTCTAAAGTTCCGTTCTTAACTGTGGGAAAATGTTCTGTTGTGATGCCTTTTACTGCGTCTATTTGTAACCAATTGAATGAAGAAATCAAAATGTGTTTACTTTGTATAATTTACTTGTATTACGTCTGACGCTCTCTCCTATTTGGAACAAAGCTTAAAAGAGAGAGAGGTTGGGGCATCGGTTCAACTTCTTAACTTAGGTTTTGTTAGTGAAGTTTGTGTTAGGAAAACTGGGTGTTGGGGGTTCGAATGGGTTACTATTCTCAAGCCAGTCGGGTTCTTCAGGAAAACTTGGGTTTGGCGATTCCGCCCCAATATGTGGGTTAGAAAGTCAAACTCACACCCCCGAATGCTTCAAAGGGTGCTTGGCCAAAGAGTTGGAGAGTAGGATTTGAGGGGAGGGGAGTTCACAATTCCACTCCTTGTTTGGCCAAGGAGTTTGGGAGTCTCACTACTATAAAAAGTCAATTTTATACCTTATTAACTCCTTACACTGTTTAAGAATTCACAACTCCACTCCTTGTCCTGAACGTCCCCCAAACATTTAAGAACCTGAGTTAAGAAATGTGTTTGTTTTTTAAGGTTTTTTGCACAACTTGGTTCTAATAAAACAATATTTCCGTTATTGTAACCTAAATTCTGTGCATACTAAATAGACCCATGTTTTCCATATCTTAGAAGAACTAGACCCTATGAGTTGTCAAAGTACTGATCTTTCTGTTGCTTTCTTCTGTTTTTGTAGTCTTTGACTATCAATGAGTTCTTGAAGCCAGCCGAAGGAGAGAGACACTTCACTCCAGGTGGTCGGGGTAGGGGCCGGGGCCGTGGTTCAAGGGGAGGTTTTGTTGGCAGCTCGGTGAGCAGCAATGTTGCAGCCCCGTCGATTGGGGATCCGGGGCAGTTCCCAACCTTAGGTGCGAAATGA

mRNA sequence

ATGGCGACCACAAATCCATTTGATTTGTTGGGAGATGACGACGCCGAGGACCCATCGCAGCTAATTGCCGCCAAGCATGCCGTCGCGGCGGCGCCTAAGAAAGGTTCTGATCATCCTCAGGCCAAACAGGCGGCTGCGGCAGCTAAATTGAACAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGTGGACGTGGATATTGGCGAGGGCGTGGCAGTGGTGGCTTCAATCGTGAGTCTTCCAATAATGAGCACTCATTTAGTAGTAACCCTGAAGATGGAGAGACTATAAGGACAACAGAAAGGCGTGGTGGATATGGTGGACCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTTAATAATGGAGATTCTGTTGATGGTGAACGCCCTCGTGGTGTATTTGAACGCCACAGTGGGACTGGCCGAGGAAATGAATTCAAGCGTGAAGGGTCTGGGCGTGGAAACTGGGGAAGGTCAACTGACGAATTTCCTGAGGTTACAGAGGAAGTTAATGAATCTGAGAAGAAGTTAGGTGATGAGAAGCCCGTTCATGAGGATGATACTGCAGGTGTCAACATCGAGAGCTCTGCAAAAGAATCAGAGGAAAAAGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAATTGCTGGAGGAGAAAAGGAAGAGCCTTCTGGCATTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAGTTTGCATCCTTGCAACAGCTTTCAAGCAAAAAGGAAAACCAGGACGTCTTTATTAAATTGGGATCTGATAAGGATAAGCGAAAAGAAACTGCAGATAAGGAGGAGAGAACTAAGAAGTCTTTGACTATCAATGAGTTCTTGAAGCCAGCCGAAGGAGAGAGACACTTCACTCCAGGTGGTCGGGGTAGGGGCCGGGGCCGTGGTTCAAGGGGAGGTTTTGTTGGCAGCTCGGTGAGCAGCAATGTTGCAGCCCCGTCGATTGGGGATCCGGGGCAGTTCCCAACCTTAGGTGCGAAATGA

Coding sequence (CDS)

ATGGCGACCACAAATCCATTTGATTTGTTGGGAGATGACGACGCCGAGGACCCATCGCAGCTAATTGCCGCCAAGCATGCCGTCGCGGCGGCGCCTAAGAAAGGTTCTGATCATCCTCAGGCCAAACAGGCGGCTGCGGCAGCTAAATTGAACAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGTGGACGTGGATATTGGCGAGGGCGTGGCAGTGGTGGCTTCAATCGTGAGTCTTCCAATAATGAGCACTCATTTAGTAGTAACCCTGAAGATGGAGAGACTATAAGGACAACAGAAAGGCGTGGTGGATATGGTGGACCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTTAATAATGGAGATTCTGTTGATGGTGAACGCCCTCGTGGTGTATTTGAACGCCACAGTGGGACTGGCCGAGGAAATGAATTCAAGCGTGAAGGGTCTGGGCGTGGAAACTGGGGAAGGTCAACTGACGAATTTCCTGAGGTTACAGAGGAAGTTAATGAATCTGAGAAGAAGTTAGGTGATGAGAAGCCCGTTCATGAGGATGATACTGCAGGTGTCAACATCGAGAGCTCTGCAAAAGAATCAGAGGAAAAAGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAATTGCTGGAGGAGAAAAGGAAGAGCCTTCTGGCATTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAGTTTGCATCCTTGCAACAGCTTTCAAGCAAAAAGGAAAACCAGGACGTCTTTATTAAATTGGGATCTGATAAGGATAAGCGAAAAGAAACTGCAGATAAGGAGGAGAGAACTAAGAAGTCTTTGACTATCAATGAGTTCTTGAAGCCAGCCGAAGGAGAGAGACACTTCACTCCAGGTGGTCGGGGTAGGGGCCGGGGCCGTGGTTCAAGGGGAGGTTTTGTTGGCAGCTCGGTGAGCAGCAATGTTGCAGCCCCGTCGATTGGGGATCCGGGGCAGTTCCCAACCTTAGGTGCGAAATGA

Protein sequence

MATTNPFDLLGDDDAEDPSQLIAAKHAVAAAPKKGSDHPQAKQAAAAAKLNKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGETIRTTERRGGYGGPRGRGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVTEEVNESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEEYEKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKEERTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSRGGFVGSSVSSNVAAPSIGDPGQFPTLGAK

Homology

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BLAST of Cla006723 vs. Swiss-Prot
Match: UTP25_NEUCR (U3 small nucleolar RNA-associated protein 25 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=utp25 PE=3 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 1.5e-11
Identity = 63/218 (28.90%), Postives = 87/218 (39.91%), Query Frame = 1


Query: 78  GRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGETIRTTERRGGYGGPRGRGG 137
           GRG  RGGGGRG   G G G                            RGG GG RGRGG
Sbjct: 5   GRGGDRGGGGRG---GGGRG----------------------------RGGAGGFRGRGG 64

Query: 138 RRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVTEEVNESE 197
            RGG + G +    R         G GRG+     G  RG +G  + +F       N++ 
Sbjct: 65  SRGGGSRGGARGASR---------GRGRGSS---RGGARGGFGPRSSKF-------NDAR 124

Query: 198 KKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEEYEKLLEEKRKSLLALKTEER 257
               DE+   E+D +      S  E EE E ED+E   +  +  +   +    A KT++R
Sbjct: 125 LADKDEEEDEEEDISEEESNVSEDEIEESEEEDEEEDAQSGQPYMSLLKSFQSATKTKKR 167

Query: 258 KVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETAD 296
           K+D  E     +++  K++ +       D+D  K T D
Sbjct: 185 KLDHPEEEGPNKVTKTKDDDN-----SDDEDNEKVTED 167

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BLAST of Cla006723 vs. Swiss-Prot
Match: UTP25_SORMK (U3 small nucleolar RNA-associated protein 25 OS=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) GN=UTP25 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 52/173 (30.06%), Postives = 79/173 (45.66%), Query Frame = 1


Query: 126 RGGYGGPRGRGGRRGGFNNGDSVDGERPRG-VFERHSGTGRGNEFKREGSGRGNWGRSTD 185
           RGG GG RGRGG RGG + G    G R RG   +R +  GRG    R G  RG +G    
Sbjct: 17  RGGGGGFRGRGGSRGGGSRGGDRGGSRGRGRGGDRGASRGRGRGSSR-GGARGGFGPRPS 76

Query: 186 EFPEVTEEVNESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEEYEKLLEE 245
           +F +    + + ++   +E  + ED++     E    E E++E E++  + + Y  LL+ 
Sbjct: 77  KFNDA--RLADKDEDGSEEDDISEDESNVSEEEIEGSEEEDEEGEEEAQSGQPYMSLLKS 136

Query: 246 KRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKE 298
            +    A K+++RK+D  E          +E  +   K   D D   E  D+E
Sbjct: 137 FQS---ATKSKKRKLDHTE----------EEGPNKATKTEDDDDSDDEDDDEE 173

HSP 2 Score: 61.2 bits (147), Expect = 2.6e-08
Identity = 62/220 (28.18%), Postives = 89/220 (40.45%), Query Frame = 1


Query: 78  GRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGETIRTTERRGGYGGPRGRGG 137
           GRG  RGGGGRG  RG G GGF                          RGG  G   RGG
Sbjct: 5   GRGGDRGGGGRG--RG-GGGGF------------------------RGRGGSRGGGSRGG 64

Query: 138 RRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVTEEVNESE 197
            RGG + G    G+R         G GRG+     G  RG +G    +F +    + + +
Sbjct: 65  DRGG-SRGRGRGGDRGAS-----RGRGRGSS---RGGARGGFGPRPSKFNDA--RLADKD 124

Query: 198 KKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEEYEKLLEEKRKSLLALKTEER 257
           +   +E  + ED++     E    E E++E E++  + + Y  LL+  +    A K+++R
Sbjct: 125 EDGSEEDDISEDESNVSEEEIEGSEEEDEEGEEEAQSGQPYMSLLKSFQS---ATKSKKR 173

Query: 258 KVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKE 298
           K+D  E          +E  +   K   D D   E  D+E
Sbjct: 185 KLDHTE----------EEGPNKATKTEDDDDSDDEDDDEE 173

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BLAST of Cla006723 vs. Swiss-Prot
Match: FBRL_DROER (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta GN=Fib PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 42/107 (39.25%), Postives = 41/107 (38.32%), Query Frame = 1


Query: 75  GRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGETIRTTERRGGYGGPRG 134
           GRGG G G GGGG G  RGRG GG                           RGG+GG RG
Sbjct: 24  GRGGGGGGGGGGGFGGGRGRGGGG-----------------------DRGGRGGFGGGRG 83

Query: 135 RGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGNWGR 182
            GGR GG   G        RG F    G G      R G GRG  GR
Sbjct: 84  GGGRGGGGGGG--------RGGFGGRGGGGGRGGGGRGGGGRGGGGR 99

HSP 2 Score: 56.6 bits (135), Expect = 6.5e-07
Identity = 36/88 (40.91%), Postives = 38/88 (43.18%), Query Frame = 1


Query: 72  NEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGETIRTTERRGGYGG 131
           + GGRGG G GRGGGGRG   G G GGF                         R GG  G
Sbjct: 48  DRGGRGGFGGGRGGGGRGGGGGGGRGGFGGRGGGGGRGGGG------------RGGGGRG 107

Query: 132 PRGRGGRRGGFNNGDSV--DGERPRGVF 158
             GRGG  GGF  G +V  +  R  GVF
Sbjct: 108 GGGRGGGAGGFKGGKTVTIEPHRHEGVF 123

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BLAST of Cla006723 vs. Swiss-Prot
Match: FA98B_MOUSE (Protein FAM98B OS=Mus musculus GN=Fam98b PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-07
Identity = 54/182 (29.67%), Postives = 69/182 (37.91%), Query Frame = 1


Query: 19  SQLIAAKHAVAAAPKKGSDHPQAKQAAAAAKL---------NKPANLPSKP--LPPAQAV 78
           + L+AA+  ++   +  S   + K A A  K+          +P  +   P  +PP Q  
Sbjct: 269 AHLLAAREDLSKIIRTSSGISREKTACAINKVLMGRVPDRGGRPNEIEPPPPEMPPWQKR 328

Query: 79  REAKNEGGRGGRGSGR--GGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGETIRTTER 138
           +E    GG GG G GR  GGGGRG W G G  G    S                      
Sbjct: 329 QEGGGRGGWGGGGGGRGGGGGGRGGWGGGGGWGGGGGSG--------------------- 388

Query: 139 RGGYGGPRGRGGRRGGF-NNGD-----SVDGERPRGVFERHSGTGRGNEFKREGSGRGNW 182
            GG+GG  G GG RGGF   GD        G    G    + G G G+ +   G G G +
Sbjct: 389 -GGWGGSGGGGGGRGGFQGRGDYGGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGY 428

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BLAST of Cla006723 vs. Swiss-Prot
Match: IF2_SALAI (Translation initiation factor IF-2 OS=Salinispora arenicola (strain CNS-205) GN=infB PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06
Identity = 52/162 (32.10%), Postives = 63/162 (38.89%), Query Frame = 1


Query: 32  PKKGSDHPQAKQAAAAAKLNKPANLPSKPLPPAQAVREAKNEGGRG----GRGSGR--GG 91
           P  G+  P+   A+   + + PA++P +P P +   +     GG G    G G+GR  GG
Sbjct: 234 PAAGAGGPRPSPASMPPRPS-PASMPPRPSPASMPSQRPGRPGGPGSGRPGSGAGRPGGG 293

Query: 92  GGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGETIRTTERRGGY-GGPRGRGGRRGGFNN 151
           GG GY  G G GG                            GGY GGP G GG  GGF  
Sbjct: 294 GGGGYRGGGGGGG---------------------------GGGYRGGPGGGGGGGGGFRG 353

Query: 152 GDSVDGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEF 187
           G    G    G F   SG G G   +  G GRG  G +   F
Sbjct: 354 GPGGGG----GGF--RSGPGGGG--RPGGGGRGRGGGAAGAF 359

HSP 2 Score: 50.8 bits (120), Expect = 3.6e-05
Identity = 54/185 (29.19%), Postives = 65/185 (35.14%), Query Frame = 1


Query: 2   ATTNPFDLLGDDDAEDPSQLIAAKHAVAAAPKKGSDHPQAKQAAAAAKLNKPANLPSKPL 61
           A  NPF + G       +     + + A+ P + S      + + A+  ++    P  P 
Sbjct: 219 AGNNPFGIQGGQQRPPAAGAGGPRPSPASMPPRPSPASMPPRPSPASMPSQRPGRPGGPG 278

Query: 62  P--PAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGET 121
              P          GG G RG G GGGG GY  G G GG                     
Sbjct: 279 SGRPGSGAGRPGGGGGGGYRGGGGGGGGGGYRGGPGGGG--------------------- 338

Query: 122 IRTTERRGGYGGPR-GRGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGN 181
                  GG GG R G GG  GGF +G    G RP G   R  G G    F R G GR  
Sbjct: 339 -------GGGGGFRGGPGGGGGGFRSGPG-GGGRPGG-GGRGRGGGAAGAFGRPG-GRPT 372

Query: 182 WGRST 184
            GR +
Sbjct: 399 RGRKS 372

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BLAST of Cla006723 vs. TrEMBL
Match: A0A0A0KCI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G105680 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 9.6e-183
Identity = 327/364 (89.84%), Postives = 343/364 (94.23%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAVAAAPKKGSDHPQAKQ-AAAAAKLNKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQL+A K A AAAPKKGSDHPQAKQ AAAAAKL+KPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQA-AAAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGGR SGRGG  RGY RGRGSGGFNRES NNE+SFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRSSGRGG--RGYGRGRGSGGFNRESPNNEYSFSSNPEDGET 120

Query: 121 IRTTERRGGYGGPRGRGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
            RTTE+RGGYGGPRGRGGRRGGF NGD+ DGERPRG FERHSGTGRGNEFKREGSGRGNW
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKREGSGRGNW 180

Query: 181 GRSTDEFPEVTEEVNESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEEYE 240
           GRS +EFPEV EE NES+K LGDEKPVHEDDTAGVN E+ AKESEEKEPEDKEMTLEEYE
Sbjct: 181 GRSAEEFPEVAEEANESQK-LGDEKPVHEDDTAGVNTENPAKESEEKEPEDKEMTLEEYE 240

Query: 241 KLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKEER 300
           KLL+EKRKSLLALKTEERKVDPKEFASLQQLSSKKENQD+FIKLGSDKDKRKETADKEER
Sbjct: 241 KLLDEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDIFIKLGSDKDKRKETADKEER 300

Query: 301 TKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSR-GGFVGSSVSSNVAAPSIGDPGQFPT 360
           TKKS++INEFLKPAEGE+H+TPGGRGRGRGRGSR GG+VGSS+SSNVAAPSI DPGQFPT
Sbjct: 301 TKKSVSINEFLKPAEGEKHYTPGGRGRGRGRGSRGGGYVGSSMSSNVAAPSIEDPGQFPT 360

Query: 361 LGAK 363
           LGAK
Sbjct: 361 LGAK 360

[Close]

BLAST of Cla006723 vs. TrEMBL
Match: A0A0A0K9Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106180 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.4e-154
Identity = 282/365 (77.26%), Postives = 314/365 (86.03%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAK-HAVAAAPKKGSDHPQAKQAAAAAKLNKPANLPSK 60
           M T NPFDLLGDDDAEDPSQLIAAK  AVA AP       Q K   + A+LNKPA+LPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGG-GRGYWRGRGSGGFNRESSNNEHSFSSNPEDGE 120
           PLPPAQAVRE++NEG RGGRGSGRGGG G GY RGR  GGFNR+S+NNE+   + PEDG 
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENI--NAPEDGV 120

Query: 121 TIRTTERRGGYGGPRGRGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGN 180
             +T+ERRG YGGPRGRGGRRGGFN+G+  +GERPR  FERHSGTGRGNEFKREGSGRGN
Sbjct: 121 GGKTSERRG-YGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFPEVT-EEVNESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEE 240
           WGRSTDEF EV  E VNE+EK +GDEKP+ EDDT+GVN E+ AKE +E EPEDKEMTLEE
Sbjct: 181 WGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEE 240

Query: 241 YEKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKE 300
           YEKLLE+KRK+LLALKTEERKVDPKEFAS+QQLSSKK+N D+FIKLGS+KDKRKE ADKE
Sbjct: 241 YEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKE 300

Query: 301 ERTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSRGGFVGSSVSSNVAAPSIGDPGQFP 360
           ERTKKSL+INEFL+PA+GERH+ PGGRGRGRGRGSRGG+ GS + SNVAAPSIGDPGQFP
Sbjct: 301 ERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPM-SNVAAPSIGDPGQFP 360

Query: 361 TLGAK 363
           TLGAK
Sbjct: 361 TLGAK 361

[Close]

BLAST of Cla006723 vs. TrEMBL
Match: D7SLZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01420 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.7e-131
Identity = 258/373 (69.17%), Postives = 288/373 (77.21%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAVAAAPKKGSDHPQAKQAAAAAKLNKPANLPSKP 60
           MAT NPFDLLGDDD+EDPSQLIAA+  V   PKK        QAAA A+  KPA LPSKP
Sbjct: 1   MATMNPFDLLGDDDSEDPSQLIAAQKIV---PKKAL---APTQAAAPAQQAKPAKLPSKP 60

Query: 61  LPPAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSN------- 120
           +PPAQAVRE KNE GRGG     G GGRGY RGRG GGFNR+ +NNE+SFS+        
Sbjct: 61  VPPAQAVREGKNESGRGG-----GRGGRGYGRGRGGGGFNRDYANNENSFSNMGVAGGQG 120

Query: 121 -PEDGETIRTTERRGGYGGPRGR-GGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKR 180
            PEDGE  + +ERR  YGGPR    GRRGGF+NG++ DG+RPR  FER SGTGRGNE KR
Sbjct: 121 APEDGEGGKPSERRN-YGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRGNELKR 180

Query: 181 EGSGRGNWGRSTDEFPEVTEEV-NESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPED 240
           EGSGRGNWG  TDE   VTEEV NE EK LG EKPV E+D A  N E+   E EEKEPE+
Sbjct: 181 EGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEE 240

Query: 241 KEMTLEEYEKLLEEKRKSLLALKTEERKVD-PKEFASLQQLSSKKENQDVFIKLGSDKDK 300
           KEMTLEEYEK+LEE+RK+L  LKTEERKVD  KEF S+QQLSSKK N D+FIKLGSDKDK
Sbjct: 241 KEMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGSDKDK 300

Query: 301 RKETADKEERTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSRGGFVGSSVSSNVAAPS 360
           RKE A+KEER KK+++INEFLKPAEGER ++PGGRGRGRGRGSRGG+ G +  SNVAAPS
Sbjct: 301 RKEAAEKEERAKKAVSINEFLKPAEGERFYSPGGRGRGRGRGSRGGYGGGNAMSNVAAPS 360

Query: 361 IGDPGQFPTLGAK 363
           I DPGQFPTLGAK
Sbjct: 361 IEDPGQFPTLGAK 361

[Close]

BLAST of Cla006723 vs. TrEMBL
Match: M5X0A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007410mg PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.5e-130
Identity = 258/375 (68.80%), Postives = 292/375 (77.87%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAKHA-VAAAPKKGSDHPQAKQAAAAAKLNKPANLPSK 60
           MAT NPFDLLGDDDAEDPSQL+AA+   +AAAPKK    P   ++ A  +  KPA LPSK
Sbjct: 1   MATMNPFDLLGDDDAEDPSQLLAAQQQKLAAAPKKAL--PAQNKSGAQGQETKPAKLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNP----- 120
           P PPAQAVREA+NE G GGRG GRG G  GY RGRG GG+NRES NNE++F+++      
Sbjct: 61  PAPPAQAVREARNEAG-GGRGGGRGRG-YGYSRGRGGGGYNRESPNNENTFTNSGAPAGQ 120

Query: 121 ---EDGETIRTTERRGGYGGPRG--RGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEF 180
              EDG+    +ERRG YGGPRG  RGGRRGGF NG+  DGERPR VFER SGTGRG+E 
Sbjct: 121 GAFEDGDG-NQSERRG-YGGPRGPYRGGRRGGFGNGEVSDGERPRRVFERRSGTGRGSEI 180

Query: 181 KREGSGRGNWGRSTDEFPEVTEEV-NESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEP 240
           KREGSGRGNWG  TDE  +V EEV N +E+ LGDEKPV E D A  N E+ A E EEKEP
Sbjct: 181 KREGSGRGNWGSETDELSQVIEEVANVTERNLGDEKPVGEVDAADGNKETPANEPEEKEP 240

Query: 241 EDKEMTLEEYEKLLEEKRKSLLALKT-EERKVDPKEFASLQQLSSKKENQDVFIKLGSDK 300
           EDKEMTLEEYEK+LEEKRK+L ALKT EERKVD KEFASLQQLS+KK N D+FIKLGSDK
Sbjct: 241 EDKEMTLEEYEKVLEEKRKALQALKTSEERKVDTKEFASLQQLSNKKGNDDIFIKLGSDK 300

Query: 301 DKRKETADKEERTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSRGGFVGSSVSSNVAA 360
           DK+KE A+KEE++KKS++INEFLKPAEGER + PGGRGRGRGRG RGGF  +    + AA
Sbjct: 301 DKKKEAAEKEEKSKKSVSINEFLKPAEGERFYNPGGRGRGRGRGPRGGFSNNYSHGSAAA 360

Query: 361 PSIGDPGQFPTLGAK 363
           PSI DPGQFPTLGAK
Sbjct: 361 PSIEDPGQFPTLGAK 369

[Close]

BLAST of Cla006723 vs. TrEMBL
Match: A0A061DUT0_THECC (Hyaluronan / mRNA binding family isoform 1 OS=Theobroma cacao GN=TCM_005721 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 4.7e-129
Identity = 255/382 (66.75%), Postives = 289/382 (75.65%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAKH---------AVAAAPKKGSDHPQAKQAAAAAKLN 60
           MAT NPFDLLGDDD  + S LIAA+          A AAAPKKG    Q KQ    A   
Sbjct: 1   MATMNPFDLLGDDDTGELSLLIAAQQKAVAAATNTASAAAPKKGPAQSQGKQQQQPAIQA 60

Query: 61  KPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRG-SGGFNRESSNNEHSF 120
           KPA LPSKPLPPAQAVREA NEG RGG     G GGRG+ RGRG SGG+ R+S+++E SF
Sbjct: 61  KPAKLPSKPLPPAQAVREATNEGPRGG-----GRGGRGFGRGRGGSGGYRRDSASDETSF 120

Query: 121 SSN--------PEDGETIRTTERRGGYGGPRG-RGGRRGGFNNGDSVDGERPRGVFERHS 180
           S++        PE+GE+ + +ERR  YGGPR  RGGRRGGF+NG+   GERPR ++ERHS
Sbjct: 121 SNSAVSAGQGAPEEGESGKPSERRS-YGGPRPYRGGRRGGFSNGEVGQGERPRRMYERHS 180

Query: 181 GTGRGNEFKREGSGRGNWGRSTDEFPEVTEEV-NESEKKLGDEKPVHEDDTAGVNIESSA 240
           GTGRGNE KREGSGRGNWG  TDE  +VTEEV NESEK LGDEKP  E+D    + ES  
Sbjct: 181 GTGRGNELKREGSGRGNWGTQTDELAQVTEEVVNESEKNLGDEKPAGEEDAGDASKESPT 240

Query: 241 KESEEKEPEDKEMTLEEYEKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVF 300
            E EEKEPEDKEMTLEEYEK+LEEKRK+L ALKTEERKVD KEFA++QQLS+KK N +VF
Sbjct: 241 NEPEEKEPEDKEMTLEEYEKVLEEKRKALQALKTEERKVDAKEFATMQQLSNKKSNDEVF 300

Query: 301 IKLGSDKDKRKETADKEERTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSRGGFVGSS 360
           IKLGS+KDKRKE  DKEER KKS++INEFLKPAEGER++ P GRGRGRGRGSR GF G S
Sbjct: 301 IKLGSEKDKRKEAFDKEERAKKSVSINEFLKPAEGERYYNPSGRGRGRGRGSR-GFGGGS 360

Query: 361 VSSNVAAPSIGDPGQFPTLGAK 363
            + NV+APSI DPGQFPTLG K
Sbjct: 361 AAGNVSAPSIEDPGQFPTLGGK 375

[Close]

BLAST of Cla006723 vs. NCBI nr
Match: gi|659119708|ref|XP_008459800.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 659.8 bits (1701), Expect = 2.7e-186
Identity = 332/365 (90.96%), Postives = 347/365 (95.07%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAVAA-APKKGSDHPQAKQ-AAAAAKLNKPANLPS 60
           MATTNPFDLLGDDDAEDPSQL+A K A AA APKKGSDHPQAKQ AAAAAKLNKPANLPS
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAAVAPKKGSDHPQAKQQAAAAAKLNKPANLPS 60

Query: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGE 120
           KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGY RGRGSGGFNRE++NNE+SFSSNPEDGE
Sbjct: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNREAANNEYSFSSNPEDGE 120

Query: 121 TIRTTERRGGYGGPRGRGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGN 180
           T RTTE+RGGYGGPRGRGGRRGGF NGD+ DGERPRGVFERHSGTGRGNEFKREGSGRGN
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTDDGERPRGVFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFPEVTEEVNESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEEY 240
           WGRSTDEFPEV EE NES+K LGDEKPVHED TAGVN E++AKESEEKEPEDKEMTLEEY
Sbjct: 181 WGRSTDEFPEVAEEANESQK-LGDEKPVHEDGTAGVNTENTAKESEEKEPEDKEMTLEEY 240

Query: 241 EKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKEE 300
           EKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKE ADKEE
Sbjct: 241 EKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKEIADKEE 300

Query: 301 RTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSR-GGFVGSSVSSNVAAPSIGDPGQFP 360
           RTKKS++INEFLKPA+GERH+TPGGRGRGRGRGSR GG+V SS+SSNVAAPSI DPGQFP
Sbjct: 301 RTKKSVSINEFLKPADGERHYTPGGRGRGRGRGSRGGGYVSSSMSSNVAAPSIEDPGQFP 360

Query: 361 TLGAK 363
           TLGAK
Sbjct: 361 TLGAK 364

[Close]

BLAST of Cla006723 vs. NCBI nr
Match: gi|449466564|ref|XP_004150996.1| (PREDICTED: cyclin-dependent kinase 13-like [Cucumis sativus])

HSP 1 Score: 647.5 bits (1669), Expect = 1.4e-182
Identity = 327/364 (89.84%), Postives = 343/364 (94.23%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAVAAAPKKGSDHPQAKQ-AAAAAKLNKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQL+A K A AAAPKKGSDHPQAKQ AAAAAKL+KPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQA-AAAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGGR SGRGG  RGY RGRGSGGFNRES NNE+SFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRSSGRGG--RGYGRGRGSGGFNRESPNNEYSFSSNPEDGET 120

Query: 121 IRTTERRGGYGGPRGRGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
            RTTE+RGGYGGPRGRGGRRGGF NGD+ DGERPRG FERHSGTGRGNEFKREGSGRGNW
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKREGSGRGNW 180

Query: 181 GRSTDEFPEVTEEVNESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEEYE 240
           GRS +EFPEV EE NES+K LGDEKPVHEDDTAGVN E+ AKESEEKEPEDKEMTLEEYE
Sbjct: 181 GRSAEEFPEVAEEANESQK-LGDEKPVHEDDTAGVNTENPAKESEEKEPEDKEMTLEEYE 240

Query: 241 KLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKEER 300
           KLL+EKRKSLLALKTEERKVDPKEFASLQQLSSKKENQD+FIKLGSDKDKRKETADKEER
Sbjct: 241 KLLDEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDIFIKLGSDKDKRKETADKEER 300

Query: 301 TKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSR-GGFVGSSVSSNVAAPSIGDPGQFPT 360
           TKKS++INEFLKPAEGE+H+TPGGRGRGRGRGSR GG+VGSS+SSNVAAPSI DPGQFPT
Sbjct: 301 TKKSVSINEFLKPAEGEKHYTPGGRGRGRGRGSRGGGYVGSSMSSNVAAPSIEDPGQFPT 360

Query: 361 LGAK 363
           LGAK
Sbjct: 361 LGAK 360

[Close]

BLAST of Cla006723 vs. NCBI nr
Match: gi|449445497|ref|XP_004140509.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis sativus])

HSP 1 Score: 553.9 bits (1426), Expect = 2.1e-154
Identity = 282/365 (77.26%), Postives = 314/365 (86.03%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAK-HAVAAAPKKGSDHPQAKQAAAAAKLNKPANLPSK 60
           M T NPFDLLGDDDAEDPSQLIAAK  AVA AP       Q K   + A+LNKPA+LPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGG-GRGYWRGRGSGGFNRESSNNEHSFSSNPEDGE 120
           PLPPAQAVRE++NEG RGGRGSGRGGG G GY RGR  GGFNR+S+NNE+   + PEDG 
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENI--NAPEDGV 120

Query: 121 TIRTTERRGGYGGPRGRGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGN 180
             +T+ERRG YGGPRGRGGRRGGFN+G+  +GERPR  FERHSGTGRGNEFKREGSGRGN
Sbjct: 121 GGKTSERRG-YGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFPEVT-EEVNESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEE 240
           WGRSTDEF EV  E VNE+EK +GDEKP+ EDDT+GVN E+ AKE +E EPEDKEMTLEE
Sbjct: 181 WGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEE 240

Query: 241 YEKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKE 300
           YEKLLE+KRK+LLALKTEERKVDPKEFAS+QQLSSKK+N D+FIKLGS+KDKRKE ADKE
Sbjct: 241 YEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKE 300

Query: 301 ERTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSRGGFVGSSVSSNVAAPSIGDPGQFP 360
           ERTKKSL+INEFL+PA+GERH+ PGGRGRGRGRGSRGG+ GS + SNVAAPSIGDPGQFP
Sbjct: 301 ERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPM-SNVAAPSIGDPGQFP 360

Query: 361 TLGAK 363
           TLGAK
Sbjct: 361 TLGAK 361

[Close]

BLAST of Cla006723 vs. NCBI nr
Match: gi|659119706|ref|XP_008459799.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 552.7 bits (1423), Expect = 4.6e-154
Identity = 283/365 (77.53%), Postives = 314/365 (86.03%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAK-HAVAAAPKKGSDHPQAKQAAAAAKLNKPANLPSK 60
           MAT NPFDLLGDDDAEDPSQLIAAK  AVA AP       Q K   + A+ NKPA+LPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGG-GRGYWRGRGSGGFNRESSNNEHSFSSNPEDGE 120
           PLPPAQAVRE++NEG RGGRGSGRGGG G GY RGR  GGFNR+S+N+E+   + PEDG 
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENI--NAPEDGV 120

Query: 121 TIRTTERRGGYGGPRGRGGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKREGSGRGN 180
             +TTERRG YGGPRGRGGRRGGFN+G++ +GERPR  FERHSGTGRGNEFKREGSGRGN
Sbjct: 121 GGKTTERRG-YGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFPEVTEE-VNESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPEDKEMTLEE 240
           WGRSTDEF EV EE VNE+EK +GDEKP+ E+DT+G N +  AKE EE EPEDKEMTLEE
Sbjct: 181 WGRSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEE 240

Query: 241 YEKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKETADKE 300
           YEKLLE+KRKSLLALKTEERKVDPKEFAS+QQLSSKK+N D+FIKLGS+KDKRKE ADKE
Sbjct: 241 YEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKE 300

Query: 301 ERTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSRGGFVGSSVSSNVAAPSIGDPGQFP 360
           ERTKKSL+INEFL+PAEGERH+TPGGRGRGRGRGSRGG+ GSS+ SNVAAPSI DPGQFP
Sbjct: 301 ERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSM-SNVAAPSIEDPGQFP 360

Query: 361 TLGAK 363
            LGAK
Sbjct: 361 ILGAK 361

[Close]

BLAST of Cla006723 vs. NCBI nr
Match: gi|731420480|ref|XP_010661405.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera])

HSP 1 Score: 477.2 bits (1227), Expect = 2.5e-131
Identity = 258/373 (69.17%), Postives = 288/373 (77.21%), Query Frame = 1


Query: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAVAAAPKKGSDHPQAKQAAAAAKLNKPANLPSKP 60
           MAT NPFDLLGDDD+EDPSQLIAA+  V   PKK        QAAA A+  KPA LPSKP
Sbjct: 1   MATMNPFDLLGDDDSEDPSQLIAAQKIV---PKKAL---APTQAAAPAQQAKPAKLPSKP 60

Query: 61  LPPAQAVREAKNEGGRGGRGSGRGGGGRGYWRGRGSGGFNRESSNNEHSFSSN------- 120
           +PPAQAVRE KNE GRGG     G GGRGY RGRG GGFNR+ +NNE+SFS+        
Sbjct: 61  VPPAQAVREGKNESGRGG-----GRGGRGYGRGRGGGGFNRDYANNENSFSNMGVAGGQG 120

Query: 121 -PEDGETIRTTERRGGYGGPRGR-GGRRGGFNNGDSVDGERPRGVFERHSGTGRGNEFKR 180
            PEDGE  + +ERR  YGGPR    GRRGGF+NG++ DG+RPR  FER SGTGRGNE KR
Sbjct: 121 APEDGEGGKPSERRN-YGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRGNELKR 180

Query: 181 EGSGRGNWGRSTDEFPEVTEEV-NESEKKLGDEKPVHEDDTAGVNIESSAKESEEKEPED 240
           EGSGRGNWG  TDE   VTEEV NE EK LG EKPV E+D A  N E+   E EEKEPE+
Sbjct: 181 EGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEE 240

Query: 241 KEMTLEEYEKLLEEKRKSLLALKTEERKVD-PKEFASLQQLSSKKENQDVFIKLGSDKDK 300
           KEMTLEEYEK+LEE+RK+L  LKTEERKVD  KEF S+QQLSSKK N D+FIKLGSDKDK
Sbjct: 241 KEMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGSDKDK 300

Query: 301 RKETADKEERTKKSLTINEFLKPAEGERHFTPGGRGRGRGRGSRGGFVGSSVSSNVAAPS 360
           RKE A+KEER KK+++INEFLKPAEGER ++PGGRGRGRGRGSRGG+ G +  SNVAAPS
Sbjct: 301 RKEAAEKEERAKKAVSINEFLKPAEGERFYSPGGRGRGRGRGSRGGYGGGNAMSNVAAPS 360

Query: 361 IGDPGQFPTLGAK 363
           I DPGQFPTLGAK
Sbjct: 361 IEDPGQFPTLGAK 361

The following BLAST results are available for this feature:

BLAST of Cla006723 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UTP25_NEUCR	1.5e-11	28.90	U3 small nucleolar RNA-associated protein 25 OS=Neurospora crassa (strain ATCC 2...	[more]
UTP25_SORMK	1.4e-09	30.06	U3 small nucleolar RNA-associated protein 25 OS=Sordaria macrospora (strain ATCC...	[more]
FBRL_DROER	1.3e-07	39.25	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta GN=Fib PE=3 SV=1	[more]
FA98B_MOUSE	1.7e-07	29.67	Protein FAM98B OS=Mus musculus GN=Fam98b PE=1 SV=1	[more]
IF2_SALAI	1.4e-06	32.10	Translation initiation factor IF-2 OS=Salinispora arenicola (strain CNS-205) GN=...	[more]

BLAST of Cla006723 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCI2_CUCSA	9.6e-183	89.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G105680 PE=4 SV=1	[more]
A0A0A0K9Z4_CUCSA	1.4e-154	77.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106180 PE=4 SV=1	[more]
D7SLZ5_VITVI	1.7e-131	69.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01420 PE=4 SV=...	[more]
M5X0A0_PRUPE	1.5e-130	68.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007410mg PE=4 SV=1	[more]
A0A061DUT0_THECC	4.7e-129	66.75	Hyaluronan / mRNA binding family isoform 1 OS=Theobroma cacao GN=TCM_005721 PE=4...	[more]

BLAST of Cla006723 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119708\|ref\|XP_008459800.1\|	2.7e-186	90.96	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m...	[more]
gi\|449466564\|ref\|XP_004150996.1\|	1.4e-182	89.84	PREDICTED: cyclin-dependent kinase 13-like [Cucumis sativus]	[more]
gi\|449445497\|ref\|XP_004140509.1\|	2.1e-154	77.26	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis s...	[more]
gi\|659119706\|ref\|XP_008459799.1\|	4.6e-154	77.53	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m...	[more]
gi\|731420480\|ref\|XP_010661405.1\|	2.5e-131	69.17	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006861	HABP4_PAIRBP1-bd
IPR019084	Stm1-like_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003723	RNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU32109	watermelon EST collection version 2.0	transcribed_cluster
WMU38466	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU49269	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla006723	Cla006723.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU38466	WMU38466	transcribed_cluster
WMU49269	WMU49269	transcribed_cluster
WMU32109	WMU32109	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 155..259 score: 4.4
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 153..260 score: 2.2
IPR019084	Stm1, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..80 score: 4.0
None	No IPR available	unknown	Coil	Coil	coord: 235..258 scor
None	No IPR available	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..362 score: 1.2E
None	No IPR available	PANTHER	PTHR12299:SF24	SUBFAMILY NOT NAMED	coord: 1..362 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla006723	Cla97C06G111790	Watermelon (97103) v2	wmwmbB408
Cla006723	Csa6G105680	Cucumber (Chinese Long) v2	cuwmB542
Cla006723	MELO3C022288	Melon (DHL92) v3.5.1	mewmB137
Cla006723	ClCG06G002440	Watermelon (Charleston Gray)	wcgwmB346
Cla006723	CSPI06G08310	Wild cucumber (PI 183967)	cpiwmB561
Cla006723	Cucsa.121020	Cucumber (Gy14) v1	cgywmB191
Cla006723	CmaCh08G001550	Cucurbita maxima (Rimu)	cmawmB876
Cla006723	CmaCh17G005310	Cucurbita maxima (Rimu)	cmawmB351
Cla006723	CmoCh08G001540	Cucurbita moschata (Rifu)	cmowmB864
Cla006723	CmoCh17G005030	Cucurbita moschata (Rifu)	cmowmB346
Cla006723	Lsi09G016920	Bottle gourd (USVL1VR-Ls)	lsiwmB036
Cla006723	Cp4.1LG17g10600	Cucurbita pepo (Zucchini)	cpewmB337
Cla006723	CsGy6G008390	Cucumber (Gy14) v2	cgybwmB505
Cla006723	MELO3C022289.2	Melon (DHL92) v3.6.1	medwmB134
Cla006723	Carg04980	Silver-seed gourd	carwmB0082
Cla006723	CsaV3_6G008690	Cucumber (Chinese Long) v3	cucwmB567
Cla006723	Bhi12G001990	Wax gourd	wgowmB093

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla006723	Cucurbita pepo (Zucchini)	cpewmB155
Cla006723	Cucumber (Gy14) v2	cgybwmB509
Cla006723	Silver-seed gourd	carwmB0968
Cla006723	Cucumber (Chinese Long) v3	cucwmB570
Cla006723	Cucumber (Gy14) v1	cgywmB627
Cla006723	Cucumber (Chinese Long) v2	cuwmB544